Processing started at Thu Jul 30 14:39:37 2015 with command: DStoNetCDF.pl -mooring M46044 -ssdsServer new-ssds.mbari.org -ssdsDataServer new-ssds.mbari.org -outputDir /mbari/ssdsdata/deployments -verbose -current Mooring specified: M46044 DStoNetCDF.pl: Will process data from mooring M46044 Will process current deployment of M46044 Will read metadata from SSDS server new-ssds.mbari.org Will read DataStreams from data server new-ssds.mbari.org Will output netCDF files, plots, and Resource files to /mbari/ssdsdata/deployments Verbose output specified Looking for current Deployment(s) named like 'M46044 - May 2011' childNodeLinks = Processing ended at Thu Jul 30 14:39:37 2015 Name "main::wmoLookup" used only once: possible typo at combineTS.pl line 443. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m46044/ subdirs. Executing find /mbari/ssdsdata/deployments/m46044/201105 -name "m46044_ctd*_original.nc" -mmin -525600 -print Calling constructFerretJNL() Use of uninitialized value in numeric ne (!=) at combineTS.pl line 608. Use of uninitialized value in numeric ne (!=) at combineTS.pl line 608. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 622. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 623. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 624. constructFerretJNL(): Cannot open /OS_MBARI-M46044__R_TS.jnl for writing: Permission denied Name "main::wmoLookup" used only once: possible typo at combineM.pl line 416. Subroutine getDODSURL redefined at ssds_util.pl line 3266. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m46044/ subdirs. Executing: find /mbari/ssdsdata/deployments/m46044/201105 -regex ".*[0-9]+/m46044_asimetswr.*\.nc\|.*[0-9]+/m46044_asimetlwr.*\.nc\|.*[0-9]+/m46044_asimethrh.*\.nc\|.*[0-9]+/m46044_metsys.*\.nc\|.*[0-9]+/m46044_asimetwnd.*\.nc\|.*[0-9]+/m46044_asimetbpr.*\.nc\|.*[0-9]+/m46044_pco2.*\.nc\|.*[0-9]+/m46044_SOONpCO2.*\.nc" -mmin -525600 -print Not able to parse dates from instrument files. "my" variable $cmd masks earlier declaration in same scope at combineAll.pl line 2211. Name "main::RS" used only once: possible typo at combineAll.pl line 1415. Name "main::wmoLookup" used only once: possible typo at combineAll.pl line 535. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m46044/ subdirs. /mbari/ssdsdata/deployments/m46044/201105/m46044_aanderaaoxy_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_oasis3gf_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_wetstar_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_oasis3gf_20110630.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_gps1585_20110526.nc 1 = gps1585_20110526, value = /mbari/ssdsdata/deployments/m46044/201105/m46044_gps1585_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_oasis3controller_20120222.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_hs2_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_oasis3controller_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_gpsclock_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_emeter_20110526.nc /mbari/ssdsdata/deployments/m46044/201105/m46044_dlinfo_20110526.nc *** Cannot combineAll without an ADCP netcdf file ***