Processing started at Fri Nov 25 08:06:23 2011 with command: DStoNetCDF.pl -mooring M2 -ssdsServer new-ssds.mbari.org -ssdsDataServer new-ssds.mbari.org -outputDir /mbari/ssdsdata/deployments -verbose -current Mooring specified: M2 DStoNetCDF.pl: Will process data from mooring M2 Will process current deployment of M2 Will read metadata from SSDS server new-ssds.mbari.org Will read DataStreams from data server new-ssds.mbari.org Will output netCDF files, plots, and Resource files to /mbari/ssdsdata/deployments Verbose output specified Looking for current Deployment(s) named like 'M2 - May 2011' childNodeLinks = Processing ended at Fri Nov 25 08:06:23 2011 Name "main::wmoLookup" used only once: possible typo at combineTS.pl line 443. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m2/ subdirs. Executing find /mbari/ssdsdata/deployments/m2/201105 -name "m2_ctd*_original.nc" -mmin -525600 -print Calling constructFerretJNL() Use of uninitialized value in numeric ne (!=) at combineTS.pl line 608. Use of uninitialized value in numeric ne (!=) at combineTS.pl line 608. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 622. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 623. Use of uninitialized value in concatenation (.) or string at combineTS.pl line 624. constructFerretJNL(): Cannot open /OS_MBARI-M2__R_TS.jnl for writing: Permission denied Name "main::wmoLookup" used only once: possible typo at combineM.pl line 416. Subroutine getDODSURL redefined at ssds_util.pl line 3247. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m2/ subdirs. Executing: find /mbari/ssdsdata/deployments/m2/201105 -regex ".*[0-9]+/m2_asimetswr.*\.nc\|.*[0-9]+/m2_asimetlwr.*\.nc\|.*[0-9]+/m2_asimethrh.*\.nc\|.*[0-9]+/m2_metsys.*\.nc\|.*[0-9]+/m2_asimetwnd.*\.nc\|.*[0-9]+/m2_asimetbpr.*\.nc\|.*[0-9]+/m2_pco2.*\.nc\|.*[0-9]+/m2_SOONpCO2.*\.nc" -mmin -525600 -print Not able to parse dates from instrument files. "my" variable $cmd masks earlier declaration in same scope at combineAll.pl line 2203. Name "main::RS" used only once: possible typo at combineAll.pl line 1407. Name "main::wmoLookup" used only once: possible typo at combineAll.pl line 527. Will output netCDF file(s) to /mbari/ssdsdata/deployments in m2/ subdirs. /mbari/ssdsdata/deployments/m2/201105/m2_gpsclock_20110525.nc /mbari/ssdsdata/deployments/m2/201105/m2_oasis3controller_20110525.nc /mbari/ssdsdata/deployments/m2/201105/m2_emeter_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_oasis3gf_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_wetstar_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_gps1585_20110523.nc 1 = gps1585_20110523, value = /mbari/ssdsdata/deployments/m2/201105/m2_gps1585_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_aanderaaoxy_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_hs2_20110523.nc /mbari/ssdsdata/deployments/m2/201105/m2_gpsclock_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_oasis3controller_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_emeter_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_oasis3gf_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_wetstar_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_gps1585_20110526.nc 1 = gps1585_20110526, value = /mbari/ssdsdata/deployments/m2/201105/m2_gps1585_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_aanderaaoxy_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_hs2_20110526.nc /mbari/ssdsdata/deployments/m2/201105/m2_oasis3controller_20110629.nc /mbari/ssdsdata/deployments/m2/201105/m2_gpsclock_20110629.nc Use of uninitialized value in concatenation (.) or string at combineAll.pl line 320. Use of uninitialized value in hash element at combineAll.pl line 320. Use of uninitialized value in concatenation (.) or string at combineAll.pl line 320. k = , value = Use of uninitialized value in hash element at combineAll.pl line 321. Use of uninitialized value in hash element at combineAll.pl line 323. Use of uninitialized value in constant array element at ssds_util.pl line 3249. Use of uninitialized value in substitution (s///) at ssds_util.pl line 3268. Use of uninitialized value in substitution (s///) at ssds_util.pl line 3271. Use of uninitialized value in concatenation (.) or string at ssds_util.pl line 3273. getDODSURL(): url = Use of uninitialized value in concatenation (.) or string at SSDS.pm line 10450. Can't call method "uriString" on an undefined value at combineAll.pl line 324.