INFO 2025-06-26 15:03:35,660 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:03:35,660 process.py process_mission():434 [1] dorado_info[mission]["comment"] = UVCTD mission - TREX - ctdToUse = ctd2 INFO 2025-06-26 15:03:35,660 process.py process_mission():449 [1] Processing AUVCTD mission 2009.182.01 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:03:35,660 process.py download_process():165 [1] Download and processing steps for 2009.182.01 INFO 2025-06-26 15:03:35,660 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2009/2009182/2009.182.01 INFO 2025-06-26 15:03:35,661 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2009/2009182/2009.182.01 to /data/auv_data/dorado/missionlogs/2009.182.01 INFO 2025-06-26 15:03:40,750 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2009.182.01 INFO 2025-06-26 15:03:40,750 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/ctdDriver.log (6225694 bytes) INFO 2025-06-26 15:03:41,328 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/ctdDriver2.log (6225245 bytes) INFO 2025-06-26 15:03:41,826 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/gps.log (165236 bytes) INFO 2025-06-26 15:03:41,853 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/hydroscatlog.log (5947810 bytes) INFO 2025-06-26 15:03:42,511 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/navigation.log (20863234 bytes) INFO 2025-06-26 15:03:44,106 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/isuslog.log (414005 bytes) INFO 2025-06-26 15:03:44,153 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/parosci.log (7254998 bytes) INFO 2025-06-26 15:03:44,788 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/tailCone.log (881131 bytes) INFO 2025-06-26 15:03:44,904 logs2netcdfs.py download_process_logs():807 [1] Time to process: 4.15 seconds INFO 2025-06-26 15:03:44,905 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2009.182.01/lopc.bin (23803288 bytes) INFO 2025-06-26 15:03:44,905 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:03:44 2025 INFO 2025-06-26 15:03:44,905 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2009.182.01/parosci.nc INFO 2025-06-26 15:03:44,905 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:03:44,905 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2009.182.01/parosci.nc INFO 2025-06-26 15:03:44,908 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1246461530.4, sensor_off_time = 1246479242.4 INFO 2025-06-26 15:03:44,909 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 17712 seconds. Expecting to read 35424 L frames from the lopc.bin file. INFO 2025-06-26 15:03:44,909 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 35424 records from the lopc.bin file. INFO 2025-06-26 15:03:45,122 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2009-07-01 15:18:50 Z and endTime = 2009-07-01 20:14:02 Z with 35424 records expected to be read from lopc.bin INFO 2025-06-26 15:03:45,122 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2009.182.01/lopc.bin INFO 2025-06-26 15:03:45,122 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2009.182.01/lopc.nc INFO 2025-06-26 15:03:45,122 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2009.182.01/lopc.nc INFO 2025-06-26 15:03:45,123 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2009.182.01 INFO 2025-06-26 15:03:45,123 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 INFO 2025-06-26 15:03:45,157 lopcToNetCDF.py unpackLOPCbin():951 [1] L Frames sample M Frames ShortLFrame LBeforeMEnd MBeforeLEnd UnknownFrame Garbled L INFO 2025-06-26 15:03:45,157 lopcToNetCDF.py unpackLOPCbin():969 [1] Count Count Count Error Error Error Error Error INFO 2025-06-26 15:03:45,157 lopcToNetCDF.py unpackLOPCbin():987 [1] -------- -------- -------- ----------- ----------- ----------- ----------- ------------ ERROR 2025-06-26 15:03:49,892 lopcToNetCDF.py main():2340 [1] UnicodeDecodeError: 'utf-8' codec can't decode byte 0x9a in position 0: invalid start byte INFO 2025-06-26 15:03:49,892 lopcToNetCDF.py main():2341 [1] Failed to decode all of lopc.bin - resulting lopc.nc file likely incomplete INFO 2025-06-26 15:03:49,892 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2009.182.01/parosci.nc INFO 2025-06-26 15:03:49,892 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:03:49,892 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2009.182.01/parosci.nc INFO 2025-06-26 15:03:49,896 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1246461530.4, sensor_off_time = 1246479242.4 INFO 2025-06-26 15:03:49,896 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 17712 seconds. Expecting to read 35424 L frames from the lopc.bin file. INFO 2025-06-26 15:03:49,896 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 35424 records from the lopc.bin file. INFO 2025-06-26 15:03:49,896 lopcToNetCDF.py constructTimestampList():1340 [1] Calling correctSampleCountList() with sampleCountList[0] = 419 and len(sampleCountList) = 7767 INFO 2025-06-26 15:03:49,897 lopcToNetCDF.py correctSampleCountList():1737 [1] Found overflows at indices: [] INFO 2025-06-26 15:03:49,897 lopcToNetCDF.py correctSampleCountList():1745 [1] Original sampleCountList = [ 419 420 421 ... 13621 13622 13623] INFO 2025-06-26 15:03:49,897 lopcToNetCDF.py correctSampleCountList():1746 [1] Found 0 0 values at indices: [] INFO 2025-06-26 15:03:49,897 lopcToNetCDF.py correctSampleCountList():1779 [1] Found 0 stuck values at indices: [] INFO 2025-06-26 15:03:49,897 lopcToNetCDF.py deSpike():1588 [1] d_sampleCountList = [1 1 1 ... 1 1 1] INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py deSpike():1590 [1] Found 1 spike indicators at indices: [7] INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py deSpike():1595 [1] Identifying nature of spike value = 5864 at index = 7 INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py deSpike():1714 [1] This is the last element in spike_indx. No need to deSpike(). INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py correctSampleCountList():1805 [1] After despike() sampleCountList = [ 419 420 421 ... 13621 13622 13623] INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py constructTimestampList():1347 [1] correctSampleCountList() returned correctedSampleCountList = [ 419 420 421 ... 13621 13622 13623] with len(correctedSampleCountList) = 7767 INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py constructTimestampList():1358 [1] Subtracting 419 from all values of correctedSampleCountList INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py constructTimestampList():1363 [1] Constructing timestampArray from instrument corrected sampleCount and constant deltaT = 0.500000 INFO 2025-06-26 15:03:49,898 lopcToNetCDF.py constructTimestampList():1368 [1] New re-zeroed correctedSampleCountList = [0.0000e+00 5.0000e-01 1.0000e+00 ... 6.6010e+03 6.6015e+03 6.6020e+03] INFO 2025-06-26 15:03:49,899 lopcToNetCDF.py constructTimestampList():1379 [1] timestampArray = [1.24646153e+09 1.24646153e+09 1.24646153e+09 ... 1.24646813e+09 1.24646813e+09 1.24646813e+09] INFO 2025-06-26 15:03:49,899 lopcToNetCDF.py constructTimestampList():1380 [1] timestampArray[:2] = [1246461530.4 1246461530.9, ..., timestampArray[-2:] = 1246468131.9 1246468132.4] INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1389 [1] timestampList[:2] = [np.float64(1246461530.374269), np.float64(1246461530.874269)], ..., timestampList[-2:] = [np.float64(1246468131.874269), np.float64(1246468132.374269)]] INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1394 [1] Subsampling correctedSampleCountList (len = 7767) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1399 [1] lFrameCountWrittenList[:2] = [20, 41], ... lFrameCountWrittenList[-2:] = [7664, 7685] INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1420 [1] len(subSampledCorrectedSampleCountList) = 366 INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1439 [1] len(timestampList) = 7767 INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1440 [1] timestampList[:2] = [np.float64(1246461530.374269), np.float64(1246461530.874269)], ..., timestampList[-2:] = [np.float64(1246468131.874269), np.float64(1246468132.374269)]] INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1446 [1] Subsampling timestampList (len = 7767) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:03:49,907 lopcToNetCDF.py constructTimestampList():1457 [1] Taking indices [[np.int32(19), np.int32(40)] ... [np.int32(7663), np.int32(7684)]] from timestampList to create subSampledTimestampList INFO 2025-06-26 15:03:49,908 lopcToNetCDF.py constructTimestampList():1463 [1] len(subSampledTimestampList) = 366 INFO 2025-06-26 15:03:49,908 lopcToNetCDF.py constructTimestampList():1477 [1] Finding elements of cFrameEsecsList that != -9999 ERROR 2025-06-26 15:03:49,908 lopcToNetCDF.py constructTimestampList():1501 [1] Cannot interpolate to cFrameEsecsListInterpolated: array of sample points is empty INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2096 [1] Writing time axis for len(tsList) = 366 INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2099 [1] tsList[:1] = [np.float64(1246464258.874269)], ..., tsList[-2:] = [np.float64(1246468080.874269), np.float64(1246468091.374269)] INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2100 [1] Begin time = 2009-07-01 16:04:18 Z INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2103 [1] End time = 2009-07-01 17:08:11 Z INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2107 [1] Writing time axis for len(cFrameEsecsList) = 7689 INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2111 [1] cFrameEsecsList[:1] = [-9999], ..., cFrameEsecsList[-2:] = [-9999, -9999] INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2116 [1] Begin time = 1969-12-31 21:13:21 Z INFO 2025-06-26 15:03:49,915 lopcToNetCDF.py closeNetCDFFile():2120 [1] End time = 1969-12-31 21:13:21 Z INFO 2025-06-26 15:03:49,919 lopcToNetCDF.py main():2381 [1] Created file: /data/auv_data/dorado/missionnetcdfs/2009.182.01/lopc.nc INFO 2025-06-26 15:03:49,919 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 15:03:49 2025 Elapsed processing time from start of processing = 5 seconds INFO 2025-06-26 15:03:49,920 process.py calibrate():227 [1] Calibration steps for 2009.182.01 INFO 2025-06-26 15:03:50,099 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:03:50,101 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:03:51,213 calibrate.py _nudge_pos():1806 [1] 138: 0.070 0.0032453 0.0011031 9315 31.05 15.499 6.584 2009-07-01T15:52:10.507250432 INFO 2025-06-26 15:03:52,075 calibrate.py _nudge_pos():1806 [1] 228: 0.070 0.0020773 -0.0008767 8975 29.91 10.294 -5.431 2009-07-01T16:23:34.508187648 INFO 2025-06-26 15:03:52,105 calibrate.py _nudge_pos():1806 [1] 231: 0.080 0.0000048 -0.0000149 140 0.46 1.541 -5.941 2009-07-01T16:24:04.506132480 INFO 2025-06-26 15:03:52,976 calibrate.py _nudge_pos():1806 [1] 321: 0.080 0.0021932 -0.0007989 9425 31.41 10.346 -4.713 2009-07-01T16:56:58.510904064 INFO 2025-06-26 15:03:53,633 calibrate.py _nudge_pos():1806 [1] 390: 0.080 0.0042629 0.0037317 9170 30.56 20.665 22.625 2009-07-01T17:28:40.510608128 INFO 2025-06-26 15:03:53,643 calibrate.py _nudge_pos():1806 [1] 391: 0.080 0.0000055 -0.0000002 210 0.70 1.178 -0.063 2009-07-01T17:29:22.507731200 INFO 2025-06-26 15:03:54,480 calibrate.py _nudge_pos():1806 [1] 479: 0.090 0.0006082 -0.0001515 3465 11.55 7.804 -2.432 2009-07-01T17:42:22.504297728 INFO 2025-06-26 15:04:06,935 calibrate.py _nudge_pos():1806 [1] 1771: 0.100 0.0058598 -0.0018178 9025 30.08 28.868 -11.198 2009-07-01T18:33:58.502207232 INFO 2025-06-26 15:04:08,209 calibrate.py _nudge_pos():1806 [1] 1905: 0.100 0.0029424 -0.0012142 9055 30.18 14.448 -7.455 2009-07-01T19:06:22.509033728 INFO 2025-06-26 15:04:09,416 calibrate.py _nudge_pos():1806 [1] 2030: 0.110 0.0045835 -0.0011798 9280 30.93 21.963 -7.068 2009-07-01T19:39:22.503394816 INFO 2025-06-26 15:04:09,598 calibrate.py _nudge_pos():1806 [1] 2049: 0.110 0.0000070 -0.0000092 60 0.20 5.272 -8.639 2009-07-01T19:39:52.511339264 INFO 2025-06-26 15:04:10,205 calibrate.py _nudge_pos():1806 [1] 2111: 0.120 0.0011067 -0.0010406 9085 30.28 5.416 -6.368 2009-07-01T20:11:10.502688000 INFO 2025-06-26 15:04:11,857 calibrate.py _nudge_pos():1862 [1] 2250: - - - 4 0.01 - - INFO 2025-06-26 15:04:11,857 calibrate.py _nudge_pos():1868 [1] Points in final series = 88394 WARNING 2025-06-26 15:04:12,048 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 15:04:12,171 calibrate.py _hs2_process():2400 [1] Number of bad hs2 points: 2987 of 70795 INFO 2025-06-26 15:04:12,703 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 5 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:04:13,366 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:04:13,895 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:04:13,897 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2009.182.01/ctd1.nc INFO 2025-06-26 15:04:13,898 calibrate.py _range_qc_combined_nc():898 [1] Setting 1 ctd1_salinity values to NaN INFO 2025-06-26 15:04:13,899 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:04:13,899 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:04:14,525 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:04:15,059 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:04:15,061 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2009.182.01/ctd2.nc INFO 2025-06-26 15:04:15,062 calibrate.py _range_qc_combined_nc():898 [1] Setting 180 ctd2_salinity values to NaN INFO 2025-06-26 15:04:15,063 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:04:15,063 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:04:15,078 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2009.182.01 ERROR 2025-06-26 15:04:15,087 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2009.182.01 INFO 2025-06-26 15:04:15,105 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_cal.nc INFO 2025-06-26 15:04:15,186 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_flowSpeed, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:04:15,191 process.py align():251 [1] Alignment steps for 2009.182.01 INFO 2025-06-26 15:04:15,219 align.py process_cal():139 [1] Processing dorado_2009.182.01_cal.nc from /data/auv_data/dorado/missionnetcdfs/2009.182.01 INFO 2025-06-26 15:04:15,245 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:04:15,249 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:04:15,310 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:04:15,314 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:04:15,375 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:04:15,380 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:04:15,414 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:04:15,415 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:04:15,438 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:04:15,443 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:04:15,504 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,508 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 3.83 INFO 2025-06-26 15:04:15,559 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,564 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 3.83 INFO 2025-06-26 15:04:15,617 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,621 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 3.83 INFO 2025-06-26 15:04:15,672 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,676 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:15,733 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,737 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:15,789 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,794 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:15,848 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,852 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:15,904 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,908 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:15,966 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:15,971 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,024 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,028 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,082 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,086 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,139 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,144 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,198 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,202 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,254 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,259 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,313 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,317 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,370 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,374 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,428 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,432 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,485 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,489 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,543 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,547 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,601 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.182.01_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:04:16,605 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:04:16,670 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 15:04:16,714 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 15:04:16,758 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 15:04:16,802 align.py process_cal():249 [1] lopc_countListSum: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:04:16,841 align.py process_cal():249 [1] lopc_transCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:04:16,881 align.py process_cal():249 [1] lopc_nonTransCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:04:16,921 align.py process_cal():249 [1] lopc_LCcount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:04:16,962 align.py process_cal():249 [1] lopc_flowSpeed: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:04:17,002 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 1.04 INFO 2025-06-26 15:04:17,021 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_align.nc INFO 2025-06-26 15:04:17,092 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_depth, lopc_flowSpeed, lopc_latitude, lopc_longitude, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:04:17,095 process.py resample():273 [1] Resampling steps for 2009.182.01 INFO 2025-06-26 15:04:17,095 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:04:17,121 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_align.nc mission netCDF file INFO 2025-06-26 15:04:17,126 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_align.nc mission netCDF file INFO 2025-06-26 15:04:17,127 resample.py get_mission_start_end():1145 [1] navigation: 2009-07-01T15:19:23.521998080 to 2009-07-01T20:14:02.310918400 (0 days 00:00:00.049996288 before mission_end) INFO 2025-06-26 15:04:17,129 resample.py get_mission_start_end():1145 [1] hs2 : 2009-07-01T15:18:55.743901184 to 2009-07-01T20:14:02.290919424 (0 days 00:00:00.069995264 before mission_end) INFO 2025-06-26 15:04:17,130 resample.py get_mission_start_end():1145 [1] ctd1 : 2009-07-01T15:19:18.052372992 to 2009-07-01T20:14:02.190926592 (0 days 00:00:00.169988096 before mission_end) INFO 2025-06-26 15:04:17,132 resample.py get_mission_start_end():1145 [1] ctd2 : 2009-07-01T15:19:17.992377088 to 2009-07-01T20:14:02.360914688 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:04:17,133 resample.py get_mission_start_end():1145 [1] isus : 2009-07-01T15:20:06.369062912 to 2009-07-01T20:14:01.740957184 (0 days 00:00:00.619957504 before mission_end) INFO 2025-06-26 15:04:17,134 resample.py get_mission_start_end():1145 [1] lopc : 2009-07-01T16:04:18.874268928 to 2009-07-01T17:08:11.374268928 (0 days 03:05:50.986645760 before mission_end) WARNING 2025-06-26 15:04:17,135 resample.py get_mission_start_end():1156 [1] Instrument lopc has a gap > 5 minutes at the end of the mission: 0 days 03:05:50.986645760 INFO 2025-06-26 15:04:17,136 resample.py get_mission_start_end():1145 [1] tailcone : 2009-07-01T15:18:55.443921920 to 2009-07-01T20:14:02.040936704 (0 days 00:00:00.319977984 before mission_end) INFO 2025-06-26 15:04:17,136 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_align.nc mission netCDF file INFO 2025-06-26 15:04:17,137 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,333 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,368 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,401 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,436 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,466 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,496 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,524 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,553 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,580 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,607 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,635 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,662 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,689 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,716 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,742 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,769 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,798 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,825 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,856 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,884 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,911 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,939 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,954 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,967 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,980 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,990 resample.py resample_variable():1031 [1] Resampling lopc_countListSum with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:17,990 resample.py resample_variable():1038 [1] Padding lopc_countListSum with 0 days 03:05:50.986645760 of NaNs to the end of mission INFO 2025-06-26 15:04:18,000 resample.py resample_variable():1031 [1] Resampling lopc_transCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:18,000 resample.py resample_variable():1038 [1] Padding lopc_transCount with 0 days 03:05:50.986645760 of NaNs to the end of mission INFO 2025-06-26 15:04:18,010 resample.py resample_variable():1031 [1] Resampling lopc_nonTransCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:18,010 resample.py resample_variable():1038 [1] Padding lopc_nonTransCount with 0 days 03:05:50.986645760 of NaNs to the end of mission INFO 2025-06-26 15:04:18,020 resample.py resample_variable():1031 [1] Resampling lopc_LCcount with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:18,021 resample.py resample_variable():1038 [1] Padding lopc_LCcount with 0 days 03:05:50.986645760 of NaNs to the end of mission INFO 2025-06-26 15:04:18,030 resample.py resample_variable():1031 [1] Resampling lopc_flowSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:18,030 resample.py resample_variable():1038 [1] Padding lopc_flowSpeed with 0 days 03:05:50.986645760 of NaNs to the end of mission INFO 2025-06-26 15:04:18,044 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:04:18,247 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_1S.nc INFO 2025-06-26 15:04:20,062 create_products.py _get_best_ctd():380 [1] ctdToUse = ctd2 INFO 2025-06-26 15:04:24,333 create_products.py gulper_odv():522 [1] Wrote 4 Gulper data lines to /data/auv_data/dorado/missionodvs/2009.182.01/dorado_2009.182.01_1S_Gulper.txt INFO 2025-06-26 15:04:24,333 process.py archive():337 [1] Archiving steps for 2009.182.01 INFO 2025-06-26 15:04:24,333 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01, BASE_PATH = /data/auv_data INFO 2025-06-26 15:04:24,333 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01 files to /Volumes/AUVCTD/surveys/2009/netcdf INFO 2025-06-26 15:04:24,335 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.182.01_1S.nc INFO 2025-06-26 15:04:24,353 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_1S.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 15:04:24,355 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.182.01_cal.nc INFO 2025-06-26 15:04:24,431 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_cal.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 15:04:24,432 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.182.01_align.nc INFO 2025-06-26 15:04:24,493 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_align.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 15:04:24,515 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,536 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,542 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/gps.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,562 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,619 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,626 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,650 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,658 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,676 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009182/2009.182.01 done. INFO 2025-06-26 15:04:24,676 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:04:24,677 archive.py copy_to_AUVTCD():133 [1] Removing /Volumes/AUVCTD/surveys/2009/odv/dorado_2009.182.01_1S_Gulper.txt INFO 2025-06-26 15:04:24,682 archive.py copy_to_AUVTCD():136 [1] copyfile /data/auv_data/dorado/missionodvs/2009.182.01/dorado_2009.182.01_1S_Gulper.txt /Volumes/AUVCTD/surveys/2009/odv done. INFO 2025-06-26 15:04:24,683 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.182.01/dorado_2009.182.01_processing.log /Volumes/AUVCTD/surveys/2009/netcdf