INFO 2025-06-26 14:32:46,499 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 14:32:46,499 process.py process_mission():434 [1] dorado_info[mission]["comment"] = AUVCTD mission - Ryan along canyon transect - CTD1 had some issues we're looking into (software probably) - ctdToUse = ctd2 INFO 2025-06-26 14:32:46,499 process.py process_mission():449 [1] Processing AUVCTD mission 2009.055.05 by user docker_user on host eae60d30a712 INFO 2025-06-26 14:32:46,499 process.py download_process():165 [1] Download and processing steps for 2009.055.05 INFO 2025-06-26 14:32:46,499 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2009/2009055/2009.055.05 INFO 2025-06-26 14:32:46,499 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2009/2009055/2009.055.05 to /data/auv_data/dorado/missionlogs/2009.055.05 INFO 2025-06-26 14:32:53,981 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2009.055.05 INFO 2025-06-26 14:32:53,981 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/ctdDriver.log (23938948 bytes) INFO 2025-06-26 14:32:56,022 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2009.055.05/ctdDriver.log: [ 18663 18996 24249 24936 76812 120085 130613] INFO 2025-06-26 14:32:56,124 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/ctdDriver2.log (23939645 bytes) INFO 2025-06-26 14:32:58,038 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/gps.log (215636 bytes) INFO 2025-06-26 14:32:58,071 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/hydroscatlog.log (22867846 bytes) INFO 2025-06-26 14:33:00,527 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2009.055.05/hydroscatlog.log: [ 63095 130596] INFO 2025-06-26 14:33:00,621 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/navigation.log (80306206 bytes) INFO 2025-06-26 14:33:07,162 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/isuslog.log (1584981 bytes) INFO 2025-06-26 14:33:07,337 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/parosci.log (27911270 bytes) INFO 2025-06-26 14:33:09,877 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/tailCone.log (3310795 bytes) INFO 2025-06-26 14:33:10,332 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/biolume.log (18526876 bytes) INFO 2025-06-26 14:33:12,173 logs2netcdfs.py write_variables():575 [1] Expanding original timeTag to time60Hz variable for raw data INFO 2025-06-26 14:33:13,210 logs2netcdfs.py download_process_logs():807 [1] Time to process: 19.23 seconds INFO 2025-06-26 14:33:13,211 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2009.055.05/lopc.bin (3 bytes) INFO 2025-06-26 14:33:13,211 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 14:33:13 2025 INFO 2025-06-26 14:33:13,211 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2009.055.05/parosci.nc INFO 2025-06-26 14:33:13,211 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 14:33:13,211 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2009.055.05/parosci.nc INFO 2025-06-26 14:33:13,215 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1235514891.5, sensor_off_time = 1235582986.7 INFO 2025-06-26 14:33:13,216 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 68095 seconds. Expecting to read 136190 L frames from the lopc.bin file. INFO 2025-06-26 14:33:13,216 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 136190 records from the lopc.bin file. INFO 2025-06-26 14:33:14,041 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2009-02-24 22:34:51 Z and endTime = 2009-02-25 17:29:46 Z with 136190 records expected to be read from lopc.bin INFO 2025-06-26 14:33:14,041 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2009.055.05/lopc.bin INFO 2025-06-26 14:33:14,041 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2009.055.05/lopc.nc INFO 2025-06-26 14:33:14,041 lopcToNetCDF.py main():2345 [1] >>> Done reading file. INFO 2025-06-26 14:33:14,042 lopcToNetCDF.py main():2346 [1] lFrameCount = 0, mFrameCount = 0 ERROR 2025-06-26 14:33:14,042 lopcToNetCDF.py main():2376 [1] KeyError: sampleCountList or cFrameEsecsList not found in self.dataStructure INFO 2025-06-26 14:33:14,042 lopcToNetCDF.py main():2379 [1] No lopc.nc file created INFO 2025-06-26 14:33:14,042 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 14:33:14 2025 Elapsed processing time from start of processing = 0 seconds INFO 2025-06-26 14:33:14,044 process.py calibrate():227 [1] Calibration steps for 2009.055.05 INFO 2025-06-26 14:33:14,782 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 14:33:14,784 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 14:33:16,065 calibrate.py _nudge_pos():1806 [1] 141: 0.130 0.0006777 -0.0011612 3600 12.00 8.388 -17.936 2009-02-24T22:49:11.282826496 INFO 2025-06-26 14:33:17,209 calibrate.py _nudge_pos():1806 [1] 243: 0.140 -0.0001243 -0.0028677 11345 37.81 -0.488 -14.053 2009-02-24T23:28:41.280470272 INFO 2025-06-26 14:33:17,243 calibrate.py _nudge_pos():1806 [1] 246: 0.130 0.0000078 -0.0000309 115 0.38 3.052 -15.055 2009-02-24T23:29:06.288757248 INFO 2025-06-26 14:33:18,470 calibrate.py _nudge_pos():1806 [1] 357: 0.140 -0.0000794 -0.0024739 10660 35.53 -0.332 -12.902 2009-02-25T00:06:29.285101312 INFO 2025-06-26 14:33:18,969 calibrate.py _nudge_pos():1806 [1] 399: 0.150 0.0000059 -0.0000654 25 0.08 11.024 -151.503 2009-02-25T00:07:15.281950464 INFO 2025-06-26 14:33:19,350 calibrate.py _nudge_pos():1806 [1] 431: 0.140 0.0000023 0.0000197 15 0.05 7.393 78.067 2009-02-25T00:07:49.279621632 INFO 2025-06-26 14:33:19,465 calibrate.py _nudge_pos():1806 [1] 441: 0.140 -0.0011947 -0.0049985 14582 48.61 -3.650 -19.053 2009-02-25T00:56:35.289176320 INFO 2025-06-26 14:33:20,661 calibrate.py _nudge_pos():1806 [1] 545: 0.150 -0.0035060 0.0017145 9864 32.88 -15.836 9.662 2009-02-25T01:31:11.286960640 INFO 2025-06-26 14:33:20,751 calibrate.py _nudge_pos():1806 [1] 553: 0.150 -0.0000090 0.0000112 15 0.05 -28.751 44.400 2009-02-25T01:31:21.286275584 INFO 2025-06-26 14:33:21,882 calibrate.py _nudge_pos():1806 [1] 652: 0.160 -0.0028998 0.0028576 12209 40.70 -10.583 13.011 2009-02-25T02:13:41.282274048 INFO 2025-06-26 14:33:22,864 calibrate.py _nudge_pos():1806 [1] 738: 0.150 -0.0000008 -0.0000313 25 0.08 -1.413 -72.424 2009-02-25T02:15:11.286108160 INFO 2025-06-26 14:33:23,007 calibrate.py _nudge_pos():1806 [1] 750: 0.160 -0.0045121 -0.0003348 16113 53.71 -12.477 -1.155 2009-02-25T03:09:05.284564224 INFO 2025-06-26 14:33:24,133 calibrate.py _nudge_pos():1806 [1] 850: 0.170 -0.0053948 0.0046714 14413 48.05 -16.678 18.016 2009-02-25T03:58:47.280283392 INFO 2025-06-26 14:33:25,170 calibrate.py _nudge_pos():1806 [1] 947: 0.180 -0.0009785 0.0045309 14728 49.10 -2.961 17.100 2009-02-25T04:49:29.281892096 INFO 2025-06-26 14:33:26,161 calibrate.py _nudge_pos():1806 [1] 1041: 0.180 -0.0041548 0.0018515 16213 54.05 -11.421 6.348 2009-02-25T05:45:05.283360256 INFO 2025-06-26 14:33:27,269 calibrate.py _nudge_pos():1806 [1] 1145: 0.180 0.0000516 -0.0000617 15 0.05 164.217 -244.924 2009-02-25T05:46:51.286098688 INFO 2025-06-26 14:33:27,280 calibrate.py _nudge_pos():1806 [1] 1146: 0.190 -0.0001904 0.0008916 4749 15.83 -1.787 10.437 2009-02-25T06:02:41.281019392 INFO 2025-06-26 14:33:28,359 calibrate.py _nudge_pos():1806 [1] 1247: 0.190 0.0022208 0.0021108 16268 54.23 6.084 7.213 2009-02-25T06:58:35.281254656 INFO 2025-06-26 14:33:29,421 calibrate.py _nudge_pos():1806 [1] 1346: 0.190 0.0030101 0.0018448 16038 53.46 8.363 6.394 2009-02-25T07:53:41.284777984 INFO 2025-06-26 14:33:30,418 calibrate.py _nudge_pos():1806 [1] 1438: 0.190 0.0029857 0.0016128 16162 53.88 8.231 5.547 2009-02-25T08:49:05.287068160 INFO 2025-06-26 14:33:31,458 calibrate.py _nudge_pos():1806 [1] 1534: 0.200 0.0023138 0.0013271 16173 53.91 6.375 4.562 2009-02-25T09:44:35.288947456 INFO 2025-06-26 14:33:32,515 calibrate.py _nudge_pos():1806 [1] 1632: 0.010 0.0006706 0.0006262 7944 26.48 3.761 4.382 2009-02-25T10:12:41.483435264 INFO 2025-06-26 14:33:33,430 calibrate.py _nudge_pos():1806 [1] 1716: 0.010 0.0024108 -0.0001492 14523 48.41 7.395 -0.571 2009-02-25T11:02:29.488742912 INFO 2025-06-26 14:33:34,299 calibrate.py _nudge_pos():1806 [1] 1795: 0.020 0.0000025 0.0000144 15 0.05 8.038 57.242 2009-02-25T11:03:50.483194368 INFO 2025-06-26 14:33:34,347 calibrate.py _nudge_pos():1806 [1] 1799: 0.020 0.0017366 -0.0010227 9989 33.30 7.745 -5.692 2009-02-25T11:37:11.486116096 INFO 2025-06-26 14:33:35,201 calibrate.py _nudge_pos():1806 [1] 1876: 0.030 0.0032757 -0.0039206 15668 52.23 9.313 -13.909 2009-02-25T12:30:41.486216192 INFO 2025-06-26 14:33:36,165 calibrate.py _nudge_pos():1806 [1] 1961: 0.030 0.0020349 -0.0026964 9838 32.80 9.212 -15.235 2009-02-25T13:04:53.485644544 INFO 2025-06-26 14:33:37,157 calibrate.py _nudge_pos():1806 [1] 2050: 0.050 0.0030223 -0.0033401 15308 51.03 8.793 -12.129 2009-02-25T13:57:23.479855360 INFO 2025-06-26 14:33:37,170 calibrate.py _nudge_pos():1806 [1] 2051: 0.040 0.0000391 -0.0000917 240 0.80 7.290 -21.331 2009-02-25T13:58:11.486566656 INFO 2025-06-26 14:33:38,073 calibrate.py _nudge_pos():1806 [1] 2131: 0.060 0.0019887 -0.0022931 10134 33.78 8.740 -12.579 2009-02-25T14:33:17.482296064 INFO 2025-06-26 14:33:38,966 calibrate.py _nudge_pos():1806 [1] 2212: 0.060 0.0033124 -0.0026249 13188 43.96 11.184 -11.064 2009-02-25T15:18:35.486099968 INFO 2025-06-26 14:33:39,848 calibrate.py _nudge_pos():1806 [1] 2292: 0.060 0.0019305 -0.0008258 6085 20.28 14.128 -7.545 2009-02-25T15:40:11.487317760 INFO 2025-06-26 14:33:40,771 calibrate.py _nudge_pos():1806 [1] 2373: 0.080 0.0024364 -0.0015763 11027 36.76 9.835 -7.945 2009-02-25T16:18:17.480716544 INFO 2025-06-26 14:33:41,729 calibrate.py _nudge_pos():1806 [1] 2458: 0.080 0.0011890 -0.0005147 6810 22.70 7.774 -4.202 2009-02-25T16:42:23.481658624 INFO 2025-06-26 14:33:41,752 calibrate.py _nudge_pos():1806 [1] 2460: 0.070 -0.0000903 0.0000112 165 0.55 -24.496 3.784 2009-02-25T16:42:57.489328896 INFO 2025-06-26 14:33:42,765 calibrate.py _nudge_pos():1806 [1] 2551: 0.080 0.0019466 -0.0008616 11438 38.13 7.575 -4.187 2009-02-25T17:22:35.486424832 INFO 2025-06-26 14:33:47,568 calibrate.py _nudge_pos():1862 [1] 2951: - - - 1 0.00 - - INFO 2025-06-26 14:33:47,568 calibrate.py _nudge_pos():1868 [1] Points in final series = 340069 WARNING 2025-06-26 14:33:48,006 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 14:34:23,780 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 5 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 14:34:42,994 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 59 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 14:34:45,000 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 59 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 14:34:45,004 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2009.055.05/ctd1.nc WARNING 2025-06-26 14:34:45,007 calibrate.py _range_qc_combined_nc():890 [1] More than 500 (19454) ctd1_salinity values found outside of range. This may indicate a problem with the ctd1 data. INFO 2025-06-26 14:34:45,007 calibrate.py _range_qc_combined_nc():898 [1] Setting 19454 ctd1_salinity values to NaN INFO 2025-06-26 14:34:45,007 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 14:34:45,008 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 14:34:47,454 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 59 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 14:34:49,457 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 59 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 14:34:49,461 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2009.055.05/ctd2.nc INFO 2025-06-26 14:34:49,463 calibrate.py _range_qc_combined_nc():898 [1] Setting 6 ctd2_salinity values to NaN INFO 2025-06-26 14:34:49,463 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 14:34:49,463 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 INFO 2025-06-26 14:34:49,557 calibrate.py _biolume_process():3128 [1] Checking for non-monotonic increasing time60hz INFO 2025-06-26 14:34:52,648 calibrate.py _biolume_process():3131 [1] Removing non-monotonic increasing time60hz at indices: [ 60 61 62 63 8160 23340 23341 23342 23343 39900 39901 49800 49801 49802 57960 57961 57962 173760 173761 173762 283860 283861 283862 283863 283864 283865 394440 394441 394442 394443 394444 394445 394446 400260 400261 400262 400263 400264 400265 400266 400267 400268 400269 433260 433261 433262 433263 433264 433265 433266 433267 433268 433269 433270 433271 445260 445261 445262 483960 483961 483962 483963 483964 483965 516120 516121 516122 516123 516124 516125 516126 516127 516128 538200 538201 538202 538203 589800 589801 589802 589803 589804 589805 589806 589807 589808 589809 589810 589811 589812 714900 714901 714902 714903 714904 714905 720240 720241 720242 720243 720244 720245 720246 720247 720248 720249 725460 725461 725462 725463 725464 725465 725466 725467 725468 867540 867541 867542 867543 867544 867545 867546 867547 867548 945540 945541 945542 945543 945544 945545 945546 945547 945548 951960 951961 951962 1158480 1158481 1158482 1158483 1158484 1158485 1158486 1158487 1158488 1252740 1252741 1252742 1252743 1252744 1252745 1252746 1289220 1289221 1289222 1289223 1289224 1289225 1289226 1289227 1289228 1289229 1289230 1289231 1289232 1290300 1290301 1290302 1290303 1290304 1290305 1290306 1290307 1290308 1401660 1401661 1401662 1401663 1401664 1401665 1488480 1488481 1488482 1488483 1488484 1488485 1488486 1902300 1902301 1902302 2076240 2076241 2076242 2076243 2076244 2076245 2076246 2107920 2107921 2107922 2107923 2107924 2107925 2107926 2107927 2107928 2107929 2107930 2107931 2250060 2250061 2250062 2250063 2250064 2306700 2306701 2306702 2306703 2306704 2306705 2306706 2306707 2306708 2306709 2329140 2329141 2329142 2329143 2329144 2329145 2329146 2329147 2329148 2329149 2600280 2626680 2626681 2626682 2626683 2626684 2626685 2626686 2635380 2635381 2635382 2635383 2635384 2635385 2635386 2635387 2696580 2696581 2696582 2696583 2696584 2696585 2696586 2696587 2696588 2696589 2696590 2696591 2750820 2750821 2750822 2750823 2750824 2750825 2750826 2750827 2750828 2750829 2750830 2789220 2789221 2789222 2789223 2789224 2789225 2789226 2863260 2863261 2863262 2863263 2913420 2913421 3044640 3044641 3044642 3044643 3044644 3044645 3094500 3094501 3094502 3094503 3094504 3094505 3094506 3094507 3094508 3094509 3094510 3183780 3183781 3183782 3183783 3183784 3183785 3224280 3224281 3224282 3224283 3224284 3224285 3224286 3224287 3333540 3333541 3333542 3333543 3333544 3333545 3344460 3344461 3346320 3346321 3401940 3401941 3401942 3401943 3401944 3401945 3401946 3401947 3401948 3401949 3401950 3425460 3425461 3425462 3425463 3503760 3503761 3503762 3718920 3718921 3718922 3718923 3718924 3718925 3718926 3718927 3718928 3718929 3718930 3718931 3718932 3718933 3759960 3759961 3759962 3759963 3759964 3759965 3759966 3759967 3759968 3759969 3759970 3759971 3759972 3770580 3770581 3770582 3770583 3823740 3823741 3823742 3823743 3823744 3823745 3823746 3823747 3823748 3823749 3823750 3823751 3920280 3920281 3920282 3920283 3920284 3920285 3920286 3920287 3920288 3920289 3925020 3925021 3925022 3925023 3925024 3925025 3925026 3925027 3987540 3987541 3987542 3987543 3987544 3987545 3987546 3987547 4062000 4083120 4085100] INFO 2025-06-26 14:34:53,307 calibrate.py _geometric_depth_correction():3423 [1] biolume: d_beg_time_diff: -1 seconds, d_end_time_diff: -1 seconds ERROR 2025-06-26 14:34:53,314 calibrate.py process_logs():3548 [1] Error processing biolume: missing variable "No variable named 'avg_biolume'. Variables on the dataset include ['time', 'rrr', 'cal_striing', 'pump', 'flow', 'humidity', 'temperature', 'time60hz', 'raw']" ERROR 2025-06-26 14:34:53,314 calibrate.py process_logs():3542 [1] Error processing lopc: lopc has no orig_data - likely a missing or zero-sized .log file in missionlogs/2009.055.05 ERROR 2025-06-26 14:34:53,315 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2009.055.05 INFO 2025-06-26 14:34:53,370 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_cal.nc INFO 2025-06-26 14:35:06,325 calibrate.py write_netcdf():3512 [1] Data variables written: biolume_depth, biolume_flow, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 14:35:06,331 process.py align():251 [1] Alignment steps for 2009.055.05 INFO 2025-06-26 14:35:06,372 align.py process_cal():139 [1] Processing dorado_2009.055.05_cal.nc from /data/auv_data/dorado/missionnetcdfs/2009.055.05 INFO 2025-06-26 14:35:06,461 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 14:35:06,470 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 14:35:06,704 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 14:35:06,719 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 14:35:06,927 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 14:35:06,939 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 14:35:07,070 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 14:35:07,070 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 14:35:07,159 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 14:35:07,173 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 14:35:07,376 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:07,386 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:07,565 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:07,575 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:07,754 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:07,764 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:07,944 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:07,954 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:08,140 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:08,150 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:08,328 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:08,338 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:08,517 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:08,527 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:08,710 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:08,720 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:08,900 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:08,910 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:09,090 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:09,100 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:09,283 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:09,294 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:09,473 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:09,483 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:09,665 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:09,675 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:09,854 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:09,864 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:10,049 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:10,060 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:10,240 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:10,253 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:10,435 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:10,445 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:10,624 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:10,634 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:10,817 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:10,828 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:11,008 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2009.055.05_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 14:35:11,018 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 14:35:11,236 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 14:35:11,373 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 14:35:11,510 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.73 INFO 2025-06-26 14:35:11,651 align.py process_cal():249 [1] biolume_flow: instrument_sample_rate_hz = 1.00 INFO 2025-06-26 14:35:11,796 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 1.01 INFO 2025-06-26 14:35:11,837 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_align.nc INFO 2025-06-26 14:35:11,983 align.py write_netcdf():342 [1] Data variables written: biolume_depth, biolume_flow, biolume_latitude, biolume_longitude, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 14:35:11,985 process.py resample():273 [1] Resampling steps for 2009.055.05 INFO 2025-06-26 14:35:11,986 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 14:35:12,026 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_align.nc mission netCDF file INFO 2025-06-26 14:35:12,034 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_align.nc mission netCDF file INFO 2025-06-26 14:35:12,036 resample.py get_mission_start_end():1145 [1] navigation: 2009-02-24T22:35:24.149488896 to 2009-02-25T17:29:46.686885888 (0 days 00:00:00.039996928 before mission_end) INFO 2025-06-26 14:35:12,039 resample.py get_mission_start_end():1145 [1] hs2 : 2009-02-24T22:34:56.951352064 to 2009-02-25T17:29:46.636889344 (0 days 00:00:00.089993472 before mission_end) INFO 2025-06-26 14:35:12,042 resample.py get_mission_start_end():1145 [1] ctd1 : 2009-02-24T22:35:51.107642112 to 2009-02-25T17:29:46.726882816 (0 days 00:00:00 before mission_end) INFO 2025-06-26 14:35:12,044 resample.py get_mission_start_end():1145 [1] ctd2 : 2009-02-24T22:35:51.437619712 to 2009-02-25T17:29:46.696884992 (0 days 00:00:00.029997824 before mission_end) INFO 2025-06-26 14:35:12,046 resample.py get_mission_start_end():1145 [1] isus : 2009-02-24T22:36:07.176541440 to 2009-02-25T17:29:45.986933760 (0 days 00:00:00.739949056 before mission_end) INFO 2025-06-26 14:35:12,048 resample.py get_mission_start_end():1145 [1] biolume : 2009-02-24T22:34:50.751742720 to 2009-02-25T17:29:45.546929664 (0 days 00:00:01.179953152 before mission_end) INFO 2025-06-26 14:35:12,049 resample.py get_mission_start_end():1145 [1] tailcone : 2009-02-24T22:34:56.011416320 to 2009-02-25T17:29:46.406904832 (0 days 00:00:00.319977984 before mission_end) INFO 2025-06-26 14:35:12,050 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_align.nc mission netCDF file INFO 2025-06-26 14:35:12,050 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:12,732 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:12,842 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:12,950 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,059 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,152 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,245 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,337 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,425 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,510 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,636 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,720 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,806 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,891 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:13,974 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,059 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,143 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,231 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,319 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,411 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,497 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,583 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,668 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,699 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,727 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,755 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,788 resample.py resample_variable():1031 [1] Resampling biolume_flow with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:14,820 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 14:35:15,294 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_1S.nc INFO 2025-06-26 14:35:18,569 create_products.py _get_best_ctd():380 [1] ctdToUse = ctd2 INFO 2025-06-26 14:35:29,252 create_products.py gulper_odv():522 [1] Wrote 10 Gulper data lines to /data/auv_data/dorado/missionodvs/2009.055.05/dorado_2009.055.05_1S_Gulper.txt INFO 2025-06-26 14:35:29,252 process.py archive():337 [1] Archiving steps for 2009.055.05 INFO 2025-06-26 14:35:29,252 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05, BASE_PATH = /data/auv_data INFO 2025-06-26 14:35:29,254 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05 files to /Volumes/AUVCTD/surveys/2009/netcdf INFO 2025-06-26 14:35:29,255 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.055.05_1S.nc INFO 2025-06-26 14:35:29,298 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_1S.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 14:35:29,299 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.055.05_cal.nc INFO 2025-06-26 14:35:29,551 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_cal.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 14:35:29,553 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2009/netcdf/dorado_2009.055.05_align.nc INFO 2025-06-26 14:35:29,764 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_align.nc /Volumes/AUVCTD/surveys/2009/netcdf done. INFO 2025-06-26 14:35:29,831 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:29,899 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:29,905 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/gps.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:29,973 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,163 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,172 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,249 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,264 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,444 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/biolume.nc /Volumes/AUVCTD/missionnetcdfs/2009/2009055/2009.055.05 done. INFO 2025-06-26 14:35:30,444 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 14:35:30,446 archive.py copy_to_AUVTCD():133 [1] Removing /Volumes/AUVCTD/surveys/2009/odv/dorado_2009.055.05_1S_Gulper.txt INFO 2025-06-26 14:35:30,452 archive.py copy_to_AUVTCD():136 [1] copyfile /data/auv_data/dorado/missionodvs/2009.055.05/dorado_2009.055.05_1S_Gulper.txt /Volumes/AUVCTD/surveys/2009/odv done. INFO 2025-06-26 14:35:30,452 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2009.055.05/dorado_2009.055.05_processing.log /Volumes/AUVCTD/surveys/2009/netcdf