sfcctdStream2netcdf.pl Run begun at Mon Feb 21 12:24:06 2005 on host mammoth by ssdsadmin

Executing getSIAM_sfcctd.pl 1337 1327 ssds.shore.mbari.org 168 outputFiles/m0/sfcctd/2005 | tee -a /u/ssdsadmin/dev/DPforSSDS/sfcctd/logs/m0_sfcctd_20040727_hourly.log

Executing /mbari/matlab13SP1/bin/matlab < sfcctd_mooring.m | tee -a /u/ssdsadmin/dev/DPforSSDS/sfcctd/logs/m0_sfcctd_20040727_hourly.log 2>&1

Executing /mbari/matlab13SP1/bin/matlab < nohandssfcctd.m | tee -a /u/ssdsadmin/dev/DPforSSDS/sfcctd/logs/m0_sfcctd_20040727_hourly.log
Copying ncFiles/m0_sfcctd_20040727_hourly.nc to /ssdsdata/mooring/m0/sfcctd/netcdf
Copying outputFiles/m0_ctdvar3.png to /ssdsdata/mooring/m0/sfcctd/plots
Copying outputFiles/m0_ctdvar5.png to /ssdsdata/mooring/m0/sfcctd/plots

Executing /usr/java/j2sdk1.4.2_04/bin/java -jar ../ssdsLoads-prey.jar -i xml/inputDS.xml -u xml/sfcctdM0pr.xml -o xml/outputNC.txt -x | tee -a /u/ssdsadmin/dev/DPforSSDS/sfcctd/logs/m0_sfcctd_20040727_hourly.log

Executing /usr/java/j2sdk1.4.2_04/bin/java -jar ../ssdsLoads-prey.jar -i xml/inputDS.xml -u xml/sfcctdM0pr.xml -o xml/outputNC.txt -s | tee -a /u/ssdsadmin/dev/DPforSSDS/sfcctd/logs/m0_sfcctd_20040727_hourly.log
-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]

                              < M A T L A B >
                  Copyright 1984-2003 The MathWorks, Inc.
              Version 6.5.1.199709 Release 13 (Service Pack 1)
                                Aug  4 2003

  Using Toolbox Path Cache.  Type "help toolbox_path_cache" for more info.
 
  To get started, type one of these: helpwin, helpdesk, or demo.
  For product information, visit www.mathworks.com.
 
>> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]
Font specified in font.properties not found [-*-standard symbols l-medium-r-normal--*-%d-*-*-p-*-adobe-fontspecific]

                              < M A T L A B >
                  Copyright 1984-2003 The MathWorks, Inc.
              Version 6.5.1.199709 Release 13 (Service Pack 1)
                                Aug  4 2003

  Using Toolbox Path Cache.  Type "help toolbox_path_cache" for more info.
 
  To get started, type one of these: helpwin, helpdesk, or demo.
  For product information, visit www.mathworks.com.
 
>> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> load outputFiles/m0/sfcctd/2004/m0_sfcctd_jul_2004;
load outputFiles/m0/sfcctd/2004/m0_sfcctd_aug_2004;
load outputFiles/m0/sfcctd/2004/m0_sfcctd_sep_2004;
load outputFiles/m0/sfcctd/2004/m0_sfcctd_oct_2004;
load outputFiles/m0/sfcctd/2004/m0_sfcctd_nov_2004;
load outputFiles/m0/sfcctd/2004/m0_sfcctd_dec_2004;
load outputFiles/m0/sfcctd/2005/m0_sfcctd_jan_2005;
load outputFiles/m0/sfcctd/2005/m0_sfcctd_feb_2005;
>> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> XML = 
<?xml version="1.0" encoding="ISO-8859-1"?>
<Metadata>
    <ProcessRun hostName="mammoth" name="sfcctdStream2netcdf.pl run on 21 Feb 2005" startDate="2005-02-21T20:24:06Z" endDate="2005-02-21T20:25:58Z">
        <Software name="sfcctdStream2netcdf.pl" version="1.10" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/sfcctdStream2netcdf.pl?rev=1.10&amp;content-type=text/x-cvsweb-markup">
            <description>Master Perl Script</description>
        </Software>
        <Resource name="sfcctdStream2netcdf.pl" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/sfcctdStream2netcdf.pl?rev=1.10&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
            <description>Master Perl Script</description>
        </Resource>
        <Resource name="sfcctd_mooring.m" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/sfcctd_mooring.m?rev=&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
            <description>Matlab m-file</description>
        </Resource>
        <Resource name="nohandssfcctd.m" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/nohandssfcctd.m?rev=&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
            <description>Matlab m-file</description>
        </Resource>
        <Resource name="Surface Temperature - last 7 days" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/plots/m0_ctdvar3.png" resourceType="image/png">
            <description>QC plot</description>
        </Resource>
        <Resource name="Surface Salinity - last 7 days" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/plots/m0_ctdvar5.png" resourceType="image/png">
            <description>QC plot</description>
        </Resource>
        <Resource name="Processing Log" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/logs/m0_sfcctd_20040727_hourly.log" resourceType="processing log">
            <description>Ouptut from Perl and Matlab scripts</description>
        </Resource>
        <input>
            <DataStream name="1337_0_1_1327" url="http://ssds-test.shore.mbari.org/ssds/rawpackets/1337_0_1_1327" original="true">
                <description>Original Surface CTD DataStream</description>
            </DataStream>
        </input>
        <output>
            <DataFile dodsAccessible="true" name="m0_sfcctd_20040727_hourly.nc" url="http://ssds.shore.mbari.org/cgi-bin/nph-dods/ssdsdata/mooring/m0/sfcctd/netcdf/m0_sfcctd_20040727_hourly.nc" original="false">
                <Resource name="sfcctdStream2netcdf.pl" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/sfcctdStream2netcdf.pl?rev=1.10&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
                    <description>Master Perl Script</description>
                </Resource>
                <Resource name="sfcctd_mooring.m" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/sfcctd_mooring.m?rev=&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
                    <description>Matlab m-file</description>
                </Resource>
                <Resource name="nohandssfcctd.m" url="http://moonjelly.shore.mbari.org/cgi-bin/cvsweb.cgi/DPforSSDS/sfcctd/nohandssfcctd.m?rev=&amp;content-type=text/x-cvsweb-markup" resourceType="software source code">
                    <description>Matlab m-file</description>
                </Resource>
                <Resource name="Surface Temperature - last 7 days" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/plots/m0_ctdvar3.png" resourceType="image/png">
                    <description>QC plot</description>
                </Resource>
                <Resource name="Surface Salinity - last 7 days" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/plots/m0_ctdvar5.png" resourceType="image/png">
                    <description>QC plot</description>
                </Resource>
                <Resource name="Processing Log" url="http://predator.shore.mbari.org/ssdsdata/mooring/m0/sfcctd/logs/m0_sfcctd_20040727_hourly.log" resourceType="processing log">
                    <description>Ouptut from Perl and Matlab scripts</description>
                </Resource>
                <RecordDescription endian="little" parseable="false">
                    <RecordVariable name="temperature" longName="Temperature" units="Celsius" columnIndex="-1" validMin="0." validMax="30." missingValue="-999."/>
                    <RecordVariable name="conductivity" longName="Conductivity" units="Siemens/m" columnIndex="-1" validMin="2." validMax="5." missingValue="-999."/>
                    <RecordVariable name="salinity" longName="Salinity" units="none" columnIndex="-1" validMin="30." validMax="37." missingValue="-999."/>
                    <RecordVariable name="pressure" longName="Pressure" units="db" columnIndex="-1" validMin="0." validMax="400." missingValue="-999."/>
                    <RecordVariable name="temperature_flag" longName="Temperature Flag" units="none" columnIndex="-1" validMin="0." validMax="3." missingValue="1."/>
                    <RecordVariable name="salinity_flag" longName="Salinity Flag" units="none" columnIndex="-1" validMin="0." validMax="3." missingValue="1."/>
                    <RecordVariable name="conductivity_flag" longName="Conductivity Flag" units="none" columnIndex="-1" validMin="0." validMax="3." missingValue="1."/>
                    <RecordVariable name="pressure_flag" longName="Pressure Flag" units="none" columnIndex="-1" validMin="0." validMax="3." missingValue="1."/>
                </RecordDescription>
            </DataFile>
        </output>
    </ProcessRun>
</Metadata>


Submitting metadata to SSDS (updating PR)...
done. ProcessRun id = 5000314 updated.