2018-09-24T20:19:36.649Z,1537820376.649 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg 2018-09-24T20:19:48.905Z,1537820388.905 [SBIT](IMPORTANT): git: 2018-09-20 2018-09-24T20:19:48.905Z,1537820388.905 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8 2018-09-24T20:19:48.906Z,1537820388.906 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018 2018-09-24T20:19:50.765Z,1537820390.765 [BuoyancyServo](FAULT): Buoyancy failed to initialize 2018-09-24T20:20:09.637Z,1537820409.637 [SBIT](IMPORTANT): Beginning Startup BIT 2018-09-24T20:20:09.648Z,1537820409.648 [CBIT](IMPORTANT): Beginning ground fault scan 2018-09-24T20:20:20.583Z,1537820420.583 [CBIT](IMPORTANT): No ground fault detected mA: CHAN A0 (Batt): -0.024750 CHAN A1 (24V): -0.028013 CHAN A2 (12V): -0.006973 CHAN A3 (5V): -0.001786 CHAN B0 (3.3V): 0.000263 CHAN B1 (3.15aV): 0.000114 CHAN B2 (3.15bV): 0.000607 CHAN B3 (GND): 0.002166 OPEN: 0.005192 Full Scale Calc: 4.765 mA, -1.589 mA 2018-09-24T20:21:03.715Z,1537820463.715 [SBIT](IMPORTANT): SBIT PASSED 2018-09-24T20:21:03.759Z,1537820463.759 [CommandLine](IMPORTANT): got command configSet list 2018-09-24T20:21:03.759Z,1537820463.759 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg 2018-09-24T20:21:03.760Z,1537820463.760 [CommandLine](IMPORTANT): Aanderaa_O2.loadAtStartup=0 bool; 2018-09-24T20:21:03.760Z,1537820463.760 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): BuoyancyServo.accel=400 none; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): BuoyancyServo.fastPumpCoefficient=1 none; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): BuoyancyServo.velocity=300 none; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=1 bool; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter; 2018-09-24T20:21:03.761Z,1537820463.761 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): WetLabsBB2FL.loadAtStartup=0 bool; 2018-09-24T20:21:03.762Z,1537820463.762 [CommandLine](IMPORTANT): WetLabsBB2FL.simulateHardware=0 bool; 2018-09-24T20:21:04.105Z,1537820464.105 [MissionManager](IMPORTANT): Started mission Startup 2018-09-24T20:23:04.864Z,1537820584.864 [MissionManager](IMPORTANT): Started mission Default 2018-09-24T20:24:49.758Z,1537820689.758 [CommandLine](IMPORTANT): got command show variable sea_water_temperature 2018-09-24T20:24:49.768Z,1537820689.768 [CommandLine](IMPORTANT): sea_water_temperature (unknown) 2018-09-24T20:24:49.768Z,1537820689.768 [CommandLine](IMPORTANT): upward_derivative_of_sea_water_temperature (unknown) 2018-09-24T20:24:49.906Z,1537820689.906 [CommandLine](IMPORTANT): TempGradientCalculator.upward_derivative_of_sea_water_temperature (celsius_per_meter) 2018-09-24T20:24:49.913Z,1537820689.913 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_temperature (celsius) 2018-09-24T20:24:49.915Z,1537820689.915 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_median_sea_water_temperature (celsius) 2018-09-24T20:24:49.915Z,1537820689.915 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_mean_sea_water_temperature (celsius) 2018-09-24T20:24:49.915Z,1537820689.915 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_standard_deviation_sea_water_temperature (celsius) 2018-09-24T20:24:57.208Z,1537820697.208 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.sea_water_temperature 2018-09-24T20:24:57.209Z,1537820697.209 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_temperature nan degC 2018-09-24T20:25:03.409Z,1537820703.409 [CommandLine](IMPORTANT): got command get sea_water_temperature 2018-09-24T20:25:03.410Z,1537820703.410 [CommandLine](FAULT): Element has no value 2018-09-24T20:25:27.452Z,1537820727.452 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science_yz.xml 2018-09-24T20:25:28.460Z,1537820728.460 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science_yz.xml 2018-09-24T20:25:28.460Z,1537820728.460 [CommandLine](IMPORTANT): got command report touch sea_water_temperature 2018-09-24T20:25:28.615Z,1537820728.615 [MissionManager](IMPORTANT): Started mission Science 2018-09-24T20:25:35.985Z,1537820735.985 [CTD_NeilBrown](FAULT): No CTD communication! Re-initializing 2018-09-24T20:25:36.209Z,1537820736.209 [CBIT](FAULT): Communications Fault in component: CTD_NeilBrown 2018-09-24T20:25:49.907Z,1537820749.907 [CommandLine](IMPORTANT): got command configSet list 2018-09-24T20:25:49.907Z,1537820749.907 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg 2018-09-24T20:25:49.908Z,1537820749.908 [CommandLine](IMPORTANT): Aanderaa_O2.loadAtStartup=0 bool; 2018-09-24T20:25:49.908Z,1537820749.908 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour; 2018-09-24T20:25:49.908Z,1537820749.908 [CommandLine](IMPORTANT): BuoyancyServo.accel=400 none; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): BuoyancyServo.fastPumpCoefficient=1 none; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): BuoyancyServo.velocity=300 none; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=1 bool; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter; 2018-09-24T20:25:49.909Z,1537820749.909 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt; 2018-09-24T20:25:49.910Z,1537820749.910 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool; 2018-09-24T20:25:49.910Z,1537820749.910 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter; 2018-09-24T20:25:49.910Z,1537820749.910 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter; 2018-09-24T20:25:49.910Z,1537820749.910 [CommandLine](IMPORTANT): WetLabsBB2FL.loadAtStartup=0 bool; 2018-09-24T20:25:49.910Z,1537820749.910 [CommandLine](IMPORTANT): WetLabsBB2FL.simulateHardware=0 bool; 2018-09-24T20:26:03.130Z,1537820763.130 [CommandLine](IMPORTANT): got command show variable CTD_NeilBrown 2018-09-24T20:26:03.191Z,1537820763.191 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup (bool) 2018-09-24T20:26:03.191Z,1537820763.191 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware (bool) 2018-09-24T20:26:03.193Z,1537820763.193 [CommandLine](IMPORTANT): CTD_NeilBrown.power (watt) 2018-09-24T20:26:03.221Z,1537820763.221 [CommandLine](IMPORTANT): CTD_NeilBrown.maxPressBound (decibar) 2018-09-24T20:26:03.222Z,1537820763.222 [CommandLine](IMPORTANT): CTD_NeilBrown.minPressBound (decibar) 2018-09-24T20:26:03.222Z,1537820763.222 [CommandLine](IMPORTANT): CTD_NeilBrown.offset (decibar) 2018-09-24T20:26:03.222Z,1537820763.222 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound (practical_salinity_unit) 2018-09-24T20:26:03.223Z,1537820763.223 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound (practical_salinity_unit) 2018-09-24T20:26:03.321Z,1537820763.321 [CommandLine](IMPORTANT): CTD_NeilBrown.loadControl (none) 2018-09-24T20:26:03.321Z,1537820763.321 [CommandLine](IMPORTANT): CTD_NeilBrown.uart (none) 2018-09-24T20:26:03.326Z,1537820763.326 [CommandLine](IMPORTANT): CTD_NeilBrown.baud (bit_per_second) 2018-09-24T20:26:03.477Z,1537820763.477 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_density (kilogram_per_cubic_meter) 2018-09-24T20:26:03.477Z,1537820763.477 [CommandLine](IMPORTANT): CTD_NeilBrown.depth (meter) 2018-09-24T20:26:03.477Z,1537820763.477 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_pressure (decibar) 2018-09-24T20:26:03.478Z,1537820763.478 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_salinity (practical_salinity_unit) 2018-09-24T20:26:03.478Z,1537820763.478 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_temperature (celsius) 2018-09-24T20:26:03.479Z,1537820763.479 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_electrical_conductivity (unspecified) 2018-09-24T20:26:03.479Z,1537820763.479 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_median_sea_water_electrical_conductivity (millimho_per_centimeter) 2018-09-24T20:26:03.480Z,1537820763.480 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_mean_sea_water_electrical_conductivity (millimho_per_centimeter) 2018-09-24T20:26:03.480Z,1537820763.480 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_standard_deviation_sea_water_electrical_conductivity (millimho_per_centimeter) 2018-09-24T20:26:03.485Z,1537820763.485 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_median_sea_water_temperature (celsius) 2018-09-24T20:26:03.485Z,1537820763.485 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_mean_sea_water_temperature (celsius) 2018-09-24T20:26:03.485Z,1537820763.485 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_standard_deviation_sea_water_temperature (celsius) 2018-09-24T20:26:03.486Z,1537820763.486 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_median_sea_water_salinity (practical_salinity_unit) 2018-09-24T20:26:03.486Z,1537820763.486 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_mean_sea_water_salinity (practical_salinity_unit) 2018-09-24T20:26:03.487Z,1537820763.487 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_standard_deviation_sea_water_salinity (practical_salinity_unit) 2018-09-24T20:26:03.602Z,1537820763.602 [CommandLine](IMPORTANT): CTD_NeilBrown.durationOfLastRun (second) 2018-09-24T20:26:17.933Z,1537820777.933 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.simulateHardware 2018-09-24T20:26:17.934Z,1537820777.934 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware 1 bool 2018-09-24T20:26:21.953Z,1537820781.953 [CommandLine](IMPORTANT): got command failComponent 2018-09-24T20:26:21.954Z,1537820781.954 [CommandLine](IMPORTANT): Failed components: 2018-09-24T20:26:21.954Z,1537820781.954 [CommandLine](IMPORTANT): CTD_NeilBrown: Communications Fault 2018-09-24T20:26:53.040Z,1537820813.040 [CommandLine](IMPORTANT): got command maintain sensor sea_water_temperature 12.000000 celsius 2018-09-24T20:26:59.600Z,1537820819.600 [CommandLine](IMPORTANT): got command get sea_water_temperature 2018-09-24T20:26:59.600Z,1537820819.600 [CommandLine](FAULT): Element has no value 2018-09-24T20:27:25.183Z,1537820845.183 [CommandLine](IMPORTANT): got command maintain sensor CTD_NeilBrown.sea_water_temperature 12.000000 celsius 2018-09-24T20:27:28.766Z,1537820848.766 [CommandLine](IMPORTANT): got command failComponent 2018-09-24T20:27:28.766Z,1537820848.766 [CommandLine](IMPORTANT): Failed components: 2018-09-24T20:27:28.766Z,1537820848.766 [CommandLine](IMPORTANT): CTD_NeilBrown: Communications Fault 2018-09-24T20:27:32.024Z,1537820852.024 [CommandLine](IMPORTANT): got command report clear 2018-09-24T20:27:38.059Z,1537820858.059 [CommandLine](IMPORTANT): got command show stack 2018-09-24T20:27:38.060Z,1537820858.060 [CommandLine](IMPORTANT): Behavior Stack: 2018-09-24T20:27:38.061Z,1537820858.061 [Science](IMPORTANT): Priority 0: Science:C 2018-09-24T20:27:38.061Z,1537820858.061 [Science](IMPORTANT): Priority 1: Science:Read_Oil 2018-09-24T20:27:44.776Z,1537820864.776 [CommandLine](IMPORTANT): got command show variable PeakChl 2018-09-24T20:27:45.040Z,1537820865.040 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter) 2018-09-24T20:27:45.040Z,1537820865.040 [CommandLine](IMPORTANT): Science.PeakChlDeepBound (meter) 2018-09-24T20:27:45.041Z,1537820865.041 [CommandLine](IMPORTANT): Science.PeakChl (microgram_per_liter) 2018-09-24T20:27:45.042Z,1537820865.042 [CommandLine](IMPORTANT): Science.PeakChlDepth (meter) 2018-09-24T20:27:45.042Z,1537820865.042 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius) 2018-09-24T20:27:45.043Z,1537820865.043 [CommandLine](IMPORTANT): Science.PeakChlLatitude (degree) 2018-09-24T20:27:45.043Z,1537820865.043 [CommandLine](IMPORTANT): Science.PeakChlLongitude (degree) 2018-09-24T20:27:51.720Z,1537820871.720 [CommandLine](IMPORTANT): got command report touch Science.PeakChl 2018-09-24T20:27:56.135Z,1537820876.135 [CommandLine](IMPORTANT): got command show variable peakDet 2018-09-24T20:27:56.354Z,1537820876.354 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool) 2018-09-24T20:27:56.355Z,1537820876.355 [CommandLine](IMPORTANT): Science.PeakDetectNO3Active (bool) 2018-09-24T20:27:56.356Z,1537820876.356 [CommandLine](IMPORTANT): Science.PeakDetectOilActive (bool) 2018-09-24T20:28:07.094Z,1537820887.094 [CommandLine](IMPORTANT): got command set Science.PeakDetectChlActive 1.000000 bool 2018-09-24T20:28:08.510Z,1537820888.510 [Science:PeakDetectChl:A](IMPORTANT): Calling peak detect vs depth 2018-09-24T20:28:24.504Z,1537820904.504 [CommandLine](IMPORTANT): got command get sea_water_temperature 2018-09-24T20:28:24.505Z,1537820904.505 [CommandLine](IMPORTANT): sea_water_temperature 11.999994 degC 2018-09-24T20:28:39.965Z,1537820919.965 [CommandLine](IMPORTANT): got command failComponent none CTD_NeilBrown 2018-09-24T20:28:39.966Z,1537820919.966 [CommandLine](IMPORTANT): CTD_NeilBrown failureMode is No Fault 2018-09-24T20:28:47.261Z,1537820927.261 [CTD_NeilBrown](FAULT): No CTD communication! Re-initializing 2018-09-24T20:28:47.416Z,1537820927.416 [CBIT](FAULT): Communications Fault in component: CTD_NeilBrown 2018-09-24T20:28:51.679Z,1537820931.679 [CommandLine](IMPORTANT): got command show variable shallowB 2018-09-24T20:28:51.706Z,1537820931.706 [CommandLine](IMPORTANT): TempGradientCalculator.depShallowBndForAvg (meter) 2018-09-24T20:28:51.956Z,1537820931.956 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter) 2018-09-24T20:28:57.648Z,1537820937.648 [CommandLine](IMPORTANT): got command get Science.PeakChlShallowBound 2018-09-24T20:28:57.648Z,1537820937.648 [CommandLine](IMPORTANT): Science.PeakChlShallowBound 10.000000 m 2018-09-24T20:29:06.627Z,1537820946.627 [CommandLine](IMPORTANT): got command set Science.PeakChlShallowBound 0.000000 meter 2018-09-24T20:29:13.293Z,1537820953.293 [CommandLine](IMPORTANT): got command stop 2018-09-24T20:29:13.293Z,1537820953.293 [CommandLine](IMPORTANT): Scheduling is paused 2018-09-24T20:29:14.052Z,1537820954.052 [MissionManager](IMPORTANT): Started mission Default 2018-09-24T20:30:09.022Z,1537821009.022 [CommandLine](IMPORTANT): got command get depth 2018-09-24T20:30:09.023Z,1537821009.023 [CommandLine](IMPORTANT): depth 0.329802 m 2018-09-24T20:30:13.180Z,1537821013.180 [CommandLine](IMPORTANT): got command get depth 2018-09-24T20:30:13.181Z,1537821013.181 [CommandLine](IMPORTANT): depth 0.311261 m 2018-09-24T20:30:17.764Z,1537821017.764 [CommandLine](IMPORTANT): got command get depth 2018-09-24T20:30:17.765Z,1537821017.765 [CommandLine](IMPORTANT): depth 0.307190 m 2018-09-24T20:30:25.113Z,1537821025.113 [CommandLine](IMPORTANT): got command get depth 2018-09-24T20:30:25.115Z,1537821025.115 [CommandLine](IMPORTANT): depth 0.329802 m 2018-09-24T20:30:35.371Z,1537821035.371 [CommandLine](IMPORTANT): got command failComponent 2018-09-24T20:30:35.371Z,1537821035.371 [CommandLine](IMPORTANT): Failed components: 2018-09-24T20:30:35.371Z,1537821035.371 [CommandLine](IMPORTANT): CTD_NeilBrown: Communications Fault 2018-09-24T20:32:39.362Z,1537821159.362 [DataOverHttps](IMPORTANT): SBD MOMSN=8575377, MTMSN=20180924T203231 2018-09-24T20:32:45.350Z,1537821165.350 [CommandLine](IMPORTANT): got command configSet CTD_Seabird.loadAtStartup 1.000000 bool persist 2018-09-24T20:32:45.350Z,1537821165.350 [CommandLine](IMPORTANT): configSet CTD_Seabird.loadAtStartup requires a restart to take effect. 2018-09-24T20:32:45.354Z,1537821165.354 [CommandLine](IMPORTANT): got command configSet CTD_Seabird.simulateHardware 1.000000 bool persist 2018-09-24T20:32:59.772Z,1537821179.772 [CommandLine](IMPORTANT): got command restart application