INFO 2024-04-09 23:23:18,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4 file...
INFO 2024-04-09 23:23:18,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011042040_202011042045.nc4
INFO 2024-04-09 23:23:18,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4
INFO 2024-04-09 23:23:18,666Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:18,726Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:18,784Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:18,842Z lrauvNc4ToNetcdf.py createSeries():299 time     :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:18,902Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:18,960Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,019Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,076Z lrauvNc4ToNetcdf.py createSeries():299 time     :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,134Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,192Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,249Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,306Z lrauvNc4ToNetcdf.py createSeries():299 time     :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,364Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,422Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,481Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,538Z lrauvNc4ToNetcdf.py createSeries():299 time     :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes
INFO 2024-04-09 23:23:19,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2024-04-09 23:23:19,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2024-04-09 23:23:19,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2024-04-09 23:23:19,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping
INFO 2024-04-09 23:23:19,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping
INFO 2024-04-09 23:23:19,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping
INFO 2024-04-09 23:23:19,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping
INFO 2024-04-09 23:23:19,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping
INFO 2024-04-09 23:23:19,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping
INFO 2024-04-09 23:23:19,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping
INFO 2024-04-09 23:23:19,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping
INFO 2024-04-09 23:23:19,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping
INFO 2024-04-09 23:23:19,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping
INFO 2024-04-09 23:23:19,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping
INFO 2024-04-09 23:23:19,608Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,613Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2024-04-09 23:23:19,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2024-04-09 23:23:19,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping
INFO 2024-04-09 23:23:19,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping
INFO 2024-04-09 23:23:19,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping
INFO 2024-04-09 23:23:19,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping
INFO 2024-04-09 23:23:19,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping
INFO 2024-04-09 23:23:19,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2024-04-09 23:23:19,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2024-04-09 23:23:19,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping
INFO 2024-04-09 23:23:19,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping
INFO 2024-04-09 23:23:19,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2024-04-09 23:23:19,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2024-04-09 23:23:19,641Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,646Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 23:23:19,648Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 23:23:19,653Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:19,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 23:23:19,686Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle:   91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:20,564Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 23:23:20,587Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle:   91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:21,475Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 23:23:21,496Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation:   91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00
INFO 2024-04-09 23:23:22,337Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 23:23:22,338Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4
INFO 2024-04-09 23:23:22,440Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 739 vehicle dead reckoned longitude and latitude values
INFO 2024-04-09 23:23:22,551Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4
INFO 2024-04-09 23:23:22,551Z lrauvNc4ToNetcdf.py nudge_coords():786 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2024-04-09 23:23:22,553Z lrauvNc4ToNetcdf.py nudge_coords():807                  -            -            -       561      3.78              -              -                             -
INFO 2024-04-09 23:23:22,554Z lrauvNc4ToNetcdf.py nudge_coords():871    1:            -            -            -       177      1.18              -              -
INFO 2024-04-09 23:23:22,554Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 738
INFO 2024-04-09 23:23:22,582Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T194038/20201104T214537/data.csv
INFO 2024-04-09 23:23:22,681Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database
INFO 2024-04-09 23:23:22,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2024-04-09 23:23:22,889Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S'
INFO 2024-04-09 23:23:23,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045_2S_scieng.nc