INFO 2024-04-09 22:14:13,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2019/20190625_20190628/20190628T141520/201906281415_201906281610.nc4 file... INFO 2024-04-09 22:14:13,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/201906281415_201906281610.nc4 INFO 2024-04-09 22:14:13,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2019/20190625_20190628/20190628T141520/201906281415_201906281610.nc4 INFO 2024-04-09 22:14:13,965Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,058Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,148Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,249Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,351Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,433Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,514Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,619Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,720Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,801Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,899Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:14,993Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,091Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,181Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,277Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,364Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 22:14:15,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 22:14:15,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 22:14:15,449Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 22:14:15,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 22:14:15,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 22:14:15,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 22:14:15,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 22:14:15,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 22:14:15,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 22:14:15,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 22:14:15,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 22:14:15,523Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 22:14:15,529Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 22:14:15,535Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 22:14:15,542Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 22:14:15,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 22:14:15,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 22:14:15,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 22:14:15,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 22:14:15,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 22:14:15,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 22:14:15,684Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 22:14:15,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 22:14:15,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 22:14:15,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 22:14:15,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 22:14:15,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 22:14:15,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 22:14:15,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 22:14:15,747Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 22:14:15,771Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,792Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 22:14:15,795Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 22:14:15,850Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 113 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:15,923Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 22:14:15,960Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 113 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:16,030Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 22:14:16,062Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 113 v_t values found before 2019-06-28 14:15:00 and after 2019-06-28 16:10:00 INFO 2024-04-09 22:14:16,134Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 22:14:16,134Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2019/20190625_20190628/20190628T141520/201906281415_201906281610.nc4 INFO 2024-04-09 22:14:16,311Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 17009 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 22:14:16,459Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 12 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2019/20190625_20190628/20190628T141520/201906281415_201906281610.nc4 INFO 2024-04-09 22:14:16,460Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 22:14:16,462Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 22:14:16,463Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.354 -0.0000228 -0.0000535 343 2.63 -2.34 -3.77 2019-06-28 14:17:58.832354069 INFO 2024-04-09 22:14:16,466Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.359 -0.0021637 -0.0023478 5285 35.60 -7.54 -12.22 2019-06-28 14:53:35.177988052 INFO 2024-04-09 22:14:16,470Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.371 0.0000180 -0.0000237 73 0.51 -5.27 -8.54 2019-06-28 14:54:06.469300032 INFO 2024-04-09 22:14:16,473Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.367 0.0001815 -0.0000997 390 2.83 -4.03 -6.53 2019-06-28 14:56:56.490653038 INFO 2024-04-09 22:14:16,476Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.357 -0.0016280 -0.0017160 3446 23.21 -8.49 -13.70 2019-06-28 15:20:09.415709019 INFO 2024-04-09 22:14:16,480Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.359 0.0001413 -0.0000968 180 1.35 -8.21 -13.25 2019-06-28 15:21:31.044496059 INFO 2024-04-09 22:14:16,484Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.385 -0.0012560 -0.0018223 3814 25.68 -8.19 -13.15 2019-06-28 15:47:12.042921066 INFO 2024-04-09 22:14:16,488Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.338 0.0001327 -0.0003627 627 4.31 -9.70 -15.58 2019-06-28 15:51:31.228162050 INFO 2024-04-09 22:14:16,492Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.366 0.0002005 -0.0005558 873 5.87 -10.91 -17.54 2019-06-28 15:57:23.992192030 INFO 2024-04-09 22:14:16,495Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.376 0.0003128 -0.0007088 1171 7.94 -10.29 -16.55 2019-06-28 16:05:20.525110006 INFO 2024-04-09 22:14:16,498Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.373 0.0004545 -0.0002845 800 5.38 -6.09 -9.80 2019-06-28 16:10:43.735734940 INFO 2024-04-09 22:14:16,501Z lrauvNc4ToNetcdf.py nudge_coords():871 12: - - - 6 0.03 - - INFO 2024-04-09 22:14:16,502Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 17008 INFO 2024-04-09 22:14:16,535Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20190628T131520/20190628T171046/data.csv INFO 2024-04-09 22:14:16,640Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 22:14:16,645Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 22:14:17,264Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 22:14:17,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2019/20190625_20190628/20190628T141520/201906281415_201906281610_2S_scieng.nc