INFO 2018-11-03 15:42:23,382Z lrauvNc4ToNetcdf.py processResampleNc4File():849 Reading /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4 file...
INFO 2018-11-03 15:42:25,280Z lrauvNc4ToNetcdf.py processResampleNc4File():892 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2018-11-03 15:42:25,292Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-11-03 15:42:25,304Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-11-03 15:42:25,318Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-11-03 15:42:25,320Z lrauvNc4ToNetcdf.py processResampleNc4File():892 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2018-11-03 15:42:25,332Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-11-03 15:42:25,344Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-11-03 15:42:25,357Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
WARNING 2018-11-03 15:42:25,358Z lrauvNc4ToNetcdf.py processResampleNc4File():931 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
WARNING 2018-11-03 15:42:25,358Z lrauvNc4ToNetcdf.py processResampleNc4File():931 'sea_water_salinity' not in /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
WARNING 2018-11-03 15:42:25,358Z lrauvNc4ToNetcdf.py processResampleNc4File():931 'sea_water_temperature' not in /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
INFO 2018-11-03 15:42:25,360Z lrauvNc4ToNetcdf.py processResampleNc4File():892 Variable sea_water_salinity empty so skipping
INFO 2018-11-03 15:42:25,361Z lrauvNc4ToNetcdf.py processResampleNc4File():892 Variable sea_water_temperature empty so skipping
WARNING 2018-11-03 15:42:25,361Z lrauvNc4ToNetcdf.py processResampleNc4File():931 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
INFO 2018-11-03 15:42:25,427Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2018-11-03 15:42:25,431Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2018-11-03 15:42:25,435Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2018-11-03 15:42:25,438Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2018-11-03 15:42:25,451Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-11-03 15:42:25,457Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-11-03 15:42:25,468Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-11-03 15:42:25,472Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-11-03 15:42:25,492Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-11-03 15:42:25,526Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2018-11-03 15:42:25,563Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2018-11-03 15:42:25,567Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-11-03 15:42:25,570Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-11-03 15:42:25,574Z lrauvNc4ToNetcdf.py processResampleNc4File():929 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-11-03 15:42:25,574Z lrauvNc4ToNetcdf.py processResampleNc4File():931 'platform_average_current' not in /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
INFO 2018-11-03 15:42:25,683Z lrauvNc4ToNetcdf.py createNav():419 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:25,789Z lrauvNc4ToNetcdf.py createNav():419 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:25,894Z lrauvNc4ToNetcdf.py createNav():419 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,000Z lrauvNc4ToNetcdf.py createNav():419 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,106Z lrauvNc4ToNetcdf.py createNav():419 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,211Z lrauvNc4ToNetcdf.py createNav():419 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,317Z lrauvNc4ToNetcdf.py createNav():419 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,422Z lrauvNc4ToNetcdf.py createNav():419 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,528Z lrauvNc4ToNetcdf.py createNav():419 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-11-03 15:42:26,529Z lrauvNc4ToNetcdf.py nudge_coords():514 /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716.nc4
INFO 2018-11-03 15:42:26,788Z lrauvNc4ToNetcdf.py nudge_coords():522 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-11-03 15:42:26,790Z lrauvNc4ToNetcdf.py nudge_coords():538                  -            -            -         0    0.00              -              -
INFO 2018-11-03 15:42:26,791Z lrauvNc4ToNetcdf.py nudge_coords():583    1:            -            -            -       446    3.27              -              -
INFO 2018-11-03 15:42:26,791Z lrauvNc4ToNetcdf.py nudge_coords():587 Points in final series = 446
INFO 2018-11-03 15:42:26,833Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():460 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20180912T155428/20180912T181640/data.csv
INFO 2018-11-03 15:42:26,877Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():483 Found 33 position values from the Tracking database
INFO 2018-11-03 15:42:26,880Z lrauvNc4ToNetcdf.py processResampleNc4File():975 ['pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-11-03 15:42:27,308Z lrauvNc4ToNetcdf.py processResampleNc4File():978 Wrote /mbari/LRAUV/tethys/missionlogs/2018/20180906_20180917/20180912T165417/201809121654_201809121716_2S_scieng.nc