INFO 2019-01-01 19:41:59,866Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4 file...
INFO 2019-01-01 19:42:52,013Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:42:55,451Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:42:58,834Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:43:02,164Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:43:02,186Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:43:05,540Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:43:08,918Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:43:12,222Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
WARNING 2019-01-01 19:43:12,223Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4
INFO 2019-01-01 19:43:19,123Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-01 19:43:25,829Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-01 19:43:25,829Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4
INFO 2019-01-01 19:43:29,094Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-01 19:43:47,678Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-01 19:44:04,768Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-01 19:44:18,947Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
WARNING 2019-01-01 19:44:18,948Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_battery_charge' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4
WARNING 2019-01-01 19:44:18,948Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_battery_voltage' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4
INFO 2019-01-01 19:44:18,959Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-01 19:44:19,014Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-01 19:44:19,020Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-01 19:44:19,031Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-01 19:44:19,286Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-01 19:44:19,785Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-01 19:44:19,802Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-01 19:44:20,517Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-01 19:44:23,356Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-01 19:44:26,607Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:44:29,868Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:44:33,023Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:44:33,027Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125.nc4
INFO 2019-01-01 19:44:36,846Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-01 19:44:36,848Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-01 19:44:36,850Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.334063768) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,865Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.334   -0.0005898    0.0003293       920    6.14           6.04           9.94
WARNING 2019-01-01 19:44:36,869Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.336112022) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,870Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.336   -0.0000508    0.0000425        79    0.57           8.37          13.77
WARNING 2019-01-01 19:44:36,874Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.351462125) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,874Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.351   -0.0012015    0.0006577      1585   11.41           6.49          10.68
WARNING 2019-01-01 19:44:36,878Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338259221) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,879Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.338   -0.0044338    0.0248315     18875  125.85          22.07          36.56
WARNING 2019-01-01 19:44:36,884Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349722862) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,885Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.350    0.0000027    0.0005645       678    4.82          13.11          21.71
WARNING 2019-01-01 19:44:36,889Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.335088015) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,890Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.335   -0.0199561    0.0156147     19793  132.22          13.03          21.88
WARNING 2019-01-01 19:44:36,895Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.342978954) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,896Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.343   -0.0171753    0.0165489     19301  128.70          14.14          23.83
WARNING 2019-01-01 19:44:36,901Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.329819918) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,902Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.330    0.0005005    0.0024330      1640   11.59          23.17          38.90
WARNING 2019-01-01 19:44:36,906Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349323034) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,907Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.349   -0.0055481    0.0214068     19073  127.27          18.62          31.17
WARNING 2019-01-01 19:44:36,912Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.352609157) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,913Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.353    0.0006718    0.0017488       977    6.89          28.17          47.03
WARNING 2019-01-01 19:44:36,917Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.335366963) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,918Z lrauvNc4ToNetcdf.py nudge_coords():589   10:        0.335    0.0000768    0.0001567        78    0.58          29.85          49.82
WARNING 2019-01-01 19:44:36,921Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35771513) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,922Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        0.358    0.0020910    0.0039250      2519   17.65          24.81          41.21
WARNING 2019-01-01 19:44:36,926Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.355443) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,927Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        0.355   -0.0244328    0.0213498     20967  139.80          17.75          28.30
WARNING 2019-01-01 19:44:36,932Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.343168974) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,933Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.343    0.0020348    0.0028698      2779   19.35          17.30          27.48
WARNING 2019-01-01 19:44:36,938Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.34103179) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,939Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.341   -0.0372391    0.0203212     20492  136.72          17.39          27.54
WARNING 2019-01-01 19:44:36,944Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.386187077) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,945Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.386   -0.0000875    0.0000658        46    0.34          22.81          36.11
WARNING 2019-01-01 19:44:36,949Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.359764099) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,950Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.360   -0.0000387    0.0000997        67    0.51          22.92          36.29
WARNING 2019-01-01 19:44:36,954Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.354442835) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,954Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.354    0.0003110    0.0005828       589    4.28          15.94          25.22
WARNING 2019-01-01 19:44:36,958Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.347374916) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,959Z lrauvNc4ToNetcdf.py nudge_coords():589   18:        0.347   -0.0117400    0.0130020      9690   64.61          23.73          37.29
WARNING 2019-01-01 19:44:36,964Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35751605) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,965Z lrauvNc4ToNetcdf.py nudge_coords():589   19:        0.358    0.0002947    0.0013623      2627   18.30           8.79          13.80
WARNING 2019-01-01 19:44:36,969Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349323988) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,970Z lrauvNc4ToNetcdf.py nudge_coords():589   20:        0.349   -0.0066004    0.0082185      9741   64.94          14.78          23.45
WARNING 2019-01-01 19:44:36,975Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.355866909) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,976Z lrauvNc4ToNetcdf.py nudge_coords():589   21:        0.356    0.0001565    0.0001682       294    2.18           9.03          14.32
WARNING 2019-01-01 19:44:36,980Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.368880033) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,981Z lrauvNc4ToNetcdf.py nudge_coords():589   22:        0.369   -0.0060144    0.0089718      9977   66.52          15.66          24.99
WARNING 2019-01-01 19:44:36,986Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.362834931) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,987Z lrauvNc4ToNetcdf.py nudge_coords():589   23:        0.363    0.0008480    0.0002503      2045   14.11           2.06           3.29
WARNING 2019-01-01 19:44:36,991Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.382543802) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:44:36,992Z lrauvNc4ToNetcdf.py nudge_coords():589   24:        0.383    0.0001062    0.0000383      1774   12.02           0.37           0.59
INFO 2019-01-01 19:44:36,997Z lrauvNc4ToNetcdf.py nudge_coords():613   26:            -            -            -         5    0.03              -              -
INFO 2019-01-01 19:44:36,997Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 166611
INFO 2019-01-01 19:44:37,012Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20170108T054712/20170109T022556/data.csv
INFO 2019-01-01 19:44:37,073Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-01 19:44:37,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-01 19:44:37,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170108T064705/201701080647_201701090125_2S_scieng.nc