INFO 2019-01-01 19:40:27,273Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170107T193614/201701071936_201701072008.nc4 file...
INFO 2019-01-01 19:40:30,074Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-01 19:40:30,153Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:40:30,233Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:40:30,341Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:40:30,343Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-01 19:40:30,454Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:40:30,596Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:40:30,677Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
WARNING 2019-01-01 19:40:30,677Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170107T193614/201701071936_201701072008.nc4
INFO 2019-01-01 19:40:30,769Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-01 19:40:30,849Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-01 19:40:30,849Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170107T193614/201701071936_201701072008.nc4
INFO 2019-01-01 19:40:30,931Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-01 19:40:31,090Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-01 19:40:31,222Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-01 19:40:31,337Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-01 19:40:31,391Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-01 19:40:31,430Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-01 19:40:31,443Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-01 19:40:31,450Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-01 19:40:31,454Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-01 19:40:31,458Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-01 19:40:31,470Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-01 19:40:31,486Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-01 19:40:31,499Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-01 19:40:31,549Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-01 19:40:31,567Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-01 19:40:31,695Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:40:31,819Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:40:31,942Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:40:31,943Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170107T193614/201701071936_201701072008.nc4
INFO 2019-01-01 19:40:32,337Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-01 19:40:32,338Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-01 19:40:32,340Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.320740938) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,341Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.321    0.0003265    0.0008110       490    3.47          27.08          43.32
WARNING 2019-01-01 19:40:32,344Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.366997004) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,345Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.367    0.0002405    0.0009145       475    4.02          26.40          42.19
WARNING 2019-01-01 19:40:32,348Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.086215973) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,349Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.086    0.0001023    0.0007710       459    3.46          25.88          41.33
WARNING 2019-01-01 19:40:32,352Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.371951103) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,352Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.372   -0.0000087    0.0000283        18    0.12          26.85          42.87
WARNING 2019-01-01 19:40:32,355Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.377271176) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,356Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.377   -0.0000410    0.0000342         3    0.08          49.04          78.28
WARNING 2019-01-01 19:40:32,359Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.340783119) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,360Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.341   -0.0000203    0.0000048         5    0.03          17.04          27.20
WARNING 2019-01-01 19:40:32,362Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.286334992) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,363Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.286    0.0000160    0.0000132         6    0.04          37.07          59.18
WARNING 2019-01-01 19:40:32,366Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.377804995) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,367Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.378   -0.0002845    0.0000568         7    0.04         149.33         238.38
WARNING 2019-01-01 19:40:32,370Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338983059) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,370Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.339    0.0004298   -0.0000267        14    0.09         -33.90         -54.12
WARNING 2019-01-01 19:40:32,373Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.347475052) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,374Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.347    0.0000223    0.0000098         6    0.04          28.66          45.75
WARNING 2019-01-01 19:40:32,377Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.354367018) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,378Z lrauvNc4ToNetcdf.py nudge_coords():589   10:        0.354    0.0000075    0.0000365         7    0.05          91.82         146.58
WARNING 2019-01-01 19:40:32,380Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (4.728203058) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,381Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        4.728    0.0000013   -0.0000120         6    0.04         -34.69         -55.38
WARNING 2019-01-01 19:40:32,384Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (4.243374825) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,385Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        4.243   -0.0000295    0.0000328         6    0.03         110.32         176.10
WARNING 2019-01-01 19:40:32,388Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346151114) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,388Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.346   -0.0000183    0.0000137         5    0.03          51.19          81.72
WARNING 2019-01-01 19:40:32,391Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.101728201) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,392Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.102   -0.0000135    0.0000173         7    0.12          16.92          27.01
WARNING 2019-01-01 19:40:32,395Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.287073136) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,396Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.287    0.0007143    0.0018185      1061    7.98          26.50          42.21
WARNING 2019-01-01 19:40:32,399Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.342256069) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,400Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.342    0.0004788    0.0014133       747    6.61          24.94          39.64
WARNING 2019-01-01 19:40:32,403Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.360687971) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:40:32,403Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.361   -0.0004867    0.0014379       342    2.99          56.17          89.24
INFO 2019-01-01 19:40:32,406Z lrauvNc4ToNetcdf.py nudge_coords():613   19:            -            -            -        69    0.71              -              -
INFO 2019-01-01 19:40:32,407Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 3733
INFO 2019-01-01 19:40:32,451Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20170107T183624/20170107T210815/data.csv
INFO 2019-01-01 19:40:32,510Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-01 19:40:32,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-01 19:40:32,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170107T193614/201701071936_201701072008_2S_scieng.nc