INFO 2019-01-01 19:33:45,896Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170105T181147/201701051811_201701051922.nc4 file...
INFO 2019-01-01 19:33:50,340Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-01 19:33:50,561Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:33:50,755Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:33:50,976Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 19:33:50,978Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-01-01 19:33:51,196Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:33:51,416Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 19:33:51,612Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
WARNING 2019-01-01 19:33:51,612Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170105T181147/201701051811_201701051922.nc4
INFO 2019-01-01 19:33:51,613Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable sea_water_salinity empty so skipping
INFO 2019-01-01 19:33:51,615Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable sea_water_temperature empty so skipping
WARNING 2019-01-01 19:33:51,615Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170105T181147/201701051811_201701051922.nc4
INFO 2019-01-01 19:33:51,879Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-01 19:33:51,888Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-01 19:33:51,893Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-01 19:33:51,897Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-01 19:33:51,954Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-01 19:33:52,021Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-01 19:33:52,028Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-01 19:33:52,057Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-01 19:33:52,089Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-01 19:33:52,108Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-01 19:33:52,113Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-01 19:33:52,135Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-01 19:33:52,149Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-01 19:33:52,159Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-01 19:33:52,175Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-01 19:33:52,424Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:33:52,673Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:33:52,905Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 19:33:52,906Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170105T181147/201701051811_201701051922.nc4
INFO 2019-01-01 19:33:53,408Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-01 19:33:53,409Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-01 19:33:53,410Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.365807056) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,412Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.366   -0.0000693   -0.0000790       117    0.95         -10.24         -15.42
WARNING 2019-01-01 19:33:53,415Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.3178792) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,416Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.318   -0.0027152   -0.0030055      4472   32.86         -11.22         -16.95
WARNING 2019-01-01 19:33:53,419Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.328933001) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,420Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.329   -0.0002087   -0.0002520       278    1.97         -15.66         -23.68
WARNING 2019-01-01 19:33:53,423Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.357714891) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,424Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.358   -0.0020325   -0.0016647      2364   17.65         -11.54         -17.47
WARNING 2019-01-01 19:33:53,427Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.311573028) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,428Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.312   -0.0000627   -0.0000573        71    0.48         -14.54         -22.02
WARNING 2019-01-01 19:33:53,431Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.322689057) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,432Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.323   -0.0000037    0.0000027         5    0.04           9.19          13.92
WARNING 2019-01-01 19:33:53,434Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35872984) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,435Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.359   -0.0000077   -0.0000045         6    0.04         -14.14         -21.42
WARNING 2019-01-01 19:33:53,438Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346351147) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,439Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.346   -0.0000055   -0.0000030         7    0.05          -7.84         -11.88
WARNING 2019-01-01 19:33:53,442Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.359664202) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,443Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.360   -0.0000092   -0.0000055         6    0.04         -16.69         -25.28
WARNING 2019-01-01 19:33:53,445Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.313382864) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,446Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.313   -0.0000053   -0.0000047         7    0.05         -12.05         -18.25
WARNING 2019-01-01 19:33:53,449Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.318903923) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,450Z lrauvNc4ToNetcdf.py nudge_coords():589   10:        0.319   -0.0000060    0.0000002         6    0.04           0.51           0.77
WARNING 2019-01-01 19:33:53,453Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.350436926) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,454Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        0.350   -0.0000093   -0.0000122         7    0.05         -32.29         -48.90
WARNING 2019-01-01 19:33:53,456Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.358729124) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,457Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        0.359   -0.0000062   -0.0000063         6    0.04         -19.48         -29.51
WARNING 2019-01-01 19:33:53,460Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.350547075) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,461Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.351    0.0000030   -0.0000017         7    0.05          -4.38          -6.64
WARNING 2019-01-01 19:33:53,464Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35771513) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,464Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.358   -0.0000093   -0.0000045         6    0.04         -13.85         -20.98
WARNING 2019-01-01 19:33:53,467Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.362635135) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,468Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.363   -0.0000052   -0.0000080         7    0.05         -21.10         -31.96
WARNING 2019-01-01 19:33:53,471Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.367779016) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,472Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.368   -0.0000060   -0.0000057         6    0.04         -17.69         -26.79
WARNING 2019-01-01 19:33:53,475Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.311524868) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,475Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.312   -0.0000065   -0.0000038         7    0.05          -9.84         -14.91
WARNING 2019-01-01 19:33:53,478Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346740961) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,479Z lrauvNc4ToNetcdf.py nudge_coords():589   18:        0.347   -0.0000042   -0.0000040         6    0.04         -12.23         -18.52
WARNING 2019-01-01 19:33:53,482Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.358740091) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,483Z lrauvNc4ToNetcdf.py nudge_coords():589   19:        0.359   -0.0000022   -0.0000050         7    0.05         -13.26         -20.08
WARNING 2019-01-01 19:33:53,485Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35566783) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,486Z lrauvNc4ToNetcdf.py nudge_coords():589   20:        0.356   -0.0007777   -0.0006215      1071    7.14         -10.64         -16.13
WARNING 2019-01-01 19:33:53,489Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.35361886) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,490Z lrauvNc4ToNetcdf.py nudge_coords():589   21:        0.354   -0.0002910   -0.0001712       345    2.47          -8.46         -12.82
WARNING 2019-01-01 19:33:53,493Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.362835884) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,494Z lrauvNc4ToNetcdf.py nudge_coords():589   22:        0.363   -0.0000055   -0.0000100        11    0.07         -16.77         -25.42
WARNING 2019-01-01 19:33:53,497Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.37464714) < max_sec_diff_at_end (10)
INFO 2019-01-01 19:33:53,497Z lrauvNc4ToNetcdf.py nudge_coords():589   23:        0.375   -0.0000403   -0.0000523        69    0.49         -13.07         -19.81
INFO 2019-01-01 19:33:53,500Z lrauvNc4ToNetcdf.py nudge_coords():613   25:            -            -            -       409    2.84              -              -
INFO 2019-01-01 19:33:53,500Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 9303
INFO 2019-01-01 19:33:53,546Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20170105T171157/20170105T202226/data.csv
INFO 2019-01-01 19:33:53,593Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-01 19:33:53,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-01 19:33:53,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/tethys/missionlogs/2017/20170105_20170109/20170105T181147/201701051811_201701051922_2S_scieng.nc