INFO 2019-01-02 22:23:27,917Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160923_20161003/20160930T140441/201609301404_201609302012.nc4 file...
INFO 2019-01-02 22:23:45,328Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 22:23:46,382Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 22:23:47,492Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 22:23:48,506Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 22:23:48,528Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 22:23:49,602Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 22:23:50,658Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 22:23:51,671Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 22:23:51,964Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-02 22:23:53,231Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-02 22:23:54,577Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-02 22:23:54,577Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2016/20160923_20161003/20160930T140441/201609301404_201609302012.nc4
INFO 2019-01-02 22:23:55,735Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-02 22:23:58,848Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-02 22:24:01,932Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-02 22:24:04,936Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-02 22:24:05,000Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-02 22:24:05,053Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-02 22:24:05,059Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-02 22:24:05,065Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-02 22:24:05,070Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-02 22:24:05,077Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
WARNING 2019-01-02 22:24:05,078Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_buoyancy_position' not in /mbari/LRAUV/tethys/missionlogs/2016/20160923_20161003/20160930T140441/201609301404_201609302012.nc4
INFO 2019-01-02 22:24:05,134Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-02 22:24:05,219Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-02 22:24:05,280Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-02 22:24:05,922Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-02 22:24:06,984Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 22:24:08,031Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 22:24:09,050Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 22:24:09,052Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/tethys/missionlogs/2016/20160923_20161003/20160930T140441/201609301404_201609302012.nc4
INFO 2019-01-02 22:24:10,463Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-02 22:24:10,465Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2019-01-02 22:24:10,467Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349612952) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,472Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.350   -0.0000373    0.0000650       342    2.50           3.14           4.82
WARNING 2019-01-02 22:24:10,475Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.327296018) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,476Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.327   -0.0003272    0.0001215      1229    8.96           1.64           2.51
WARNING 2019-01-02 22:24:10,479Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.325236797) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,480Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.325   -0.0000583    0.0000323       147    1.67           2.33           3.59
WARNING 2019-01-02 22:24:10,484Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.355142832) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,485Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.355   -0.0017304    0.0004834       593    5.03          11.59          17.80
WARNING 2019-01-02 22:24:10,488Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.304166794) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,489Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.304   -0.0000810    0.0000638       292    4.01           1.92           2.95
WARNING 2019-01-02 22:24:10,492Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.325346946) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,493Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.325   -0.0046827    0.0019669      7591   50.74           4.66           7.18
WARNING 2019-01-02 22:24:10,497Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.357867956) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,498Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.358   -0.0004734    0.0000158      1175    9.04           0.21           0.32
WARNING 2019-01-02 22:24:10,501Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.308162928) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,502Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.308   -0.0010723    0.0004327      2225   17.27           3.02           4.64
WARNING 2019-01-02 22:24:10,506Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.284991026) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,507Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.285   -0.0004687    0.0000120       771    6.67           0.22           0.33
WARNING 2019-01-02 22:24:10,510Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.341869116) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,511Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.342   -0.0069326    0.0029450     13721   92.32           3.85           5.91
WARNING 2019-01-02 22:24:10,516Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.334810972) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,517Z lrauvNc4ToNetcdf.py nudge_coords():589   10:        0.335   -0.0006343    0.0003887      1277    9.66           4.85           7.45
WARNING 2019-01-02 22:24:10,520Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.33386302) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,521Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        0.334   -0.0004147    0.0000732       859    6.56           1.35           2.07
WARNING 2019-01-02 22:24:10,525Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.314607858) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,526Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        0.315   -0.0006125    0.0000947      1039    7.91           1.45           2.22
WARNING 2019-01-02 22:24:10,530Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.349823952) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,531Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.350   -0.0007794    0.0000044      1262    9.44           0.06           0.09
WARNING 2019-01-02 22:24:10,535Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.223850012) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,536Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.224   -0.0005702    0.0000307       638    7.22           0.51           0.79
WARNING 2019-01-02 22:24:10,539Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.344302892) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,540Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.344   -0.0008300    0.0006689      2917   20.04           4.01           6.18
WARNING 2019-01-02 22:24:10,544Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.22390604) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,545Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.224   -0.0009103   -0.0002825      1701   13.71          -2.48          -3.82
WARNING 2019-01-02 22:24:10,549Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.332403898) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,550Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.332   -0.0004767   -0.0000757       591    7.54          -1.21          -1.86
WARNING 2019-01-02 22:24:10,554Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.345227957) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,555Z lrauvNc4ToNetcdf.py nudge_coords():589   18:        0.345   -0.0001332   -0.0000107       195    1.53          -0.84          -1.29
WARNING 2019-01-02 22:24:10,558Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.311645985) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,559Z lrauvNc4ToNetcdf.py nudge_coords():589   19:        0.312   -0.0006412    0.0000495      1194   10.49           0.57           0.87
WARNING 2019-01-02 22:24:10,563Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.327232122) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,564Z lrauvNc4ToNetcdf.py nudge_coords():589   20:        0.327   -0.0002173    0.0000465       179    3.64           1.53           2.36
WARNING 2019-01-02 22:24:10,568Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.366731167) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,569Z lrauvNc4ToNetcdf.py nudge_coords():589   21:        0.367   -0.0009957   -0.0017582      3497   23.94          -8.84         -13.61
WARNING 2019-01-02 22:24:10,573Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (12.222272158) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,574Z lrauvNc4ToNetcdf.py nudge_coords():589   22:       12.222   -0.0009150    0.0003328      2035   16.26           2.47           3.79
WARNING 2019-01-02 22:24:10,578Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.356401921) < max_sec_diff_at_end (10)
INFO 2019-01-02 22:24:10,579Z lrauvNc4ToNetcdf.py nudge_coords():589   23:        0.356   -0.0003227    0.0001363       617    7.27           2.26           3.48
INFO 2019-01-02 22:24:10,583Z lrauvNc4ToNetcdf.py nudge_coords():613   25:            -            -            -      2747   19.28              -              -
INFO 2019-01-02 22:24:10,583Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 48834
INFO 2019-01-02 22:24:10,628Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20160930T130452/20160930T211147/data.csv
INFO 2019-01-02 22:24:10,679Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-02 22:24:10,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-02 22:24:11,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/tethys/missionlogs/2016/20160923_20161003/20160930T140441/201609301404_201609302012_2S_scieng.nc