INFO 2024-04-09 23:07:04,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T161845/202010101618_202010101620.nc4 file... INFO 2024-04-09 23:07:04,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010101618_202010101620.nc4 INFO 2024-04-09 23:07:04,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T161845/202010101618_202010101620.nc4 INFO 2024-04-09 23:07:05,055Z lrauvNc4ToNetcdf.py createSeries():299 depth : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,111Z lrauvNc4ToNetcdf.py createSeries():299 time : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,200Z lrauvNc4ToNetcdf.py createSeries():299 depth : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,251Z lrauvNc4ToNetcdf.py createSeries():299 time : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,339Z lrauvNc4ToNetcdf.py createSeries():299 depth : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,390Z lrauvNc4ToNetcdf.py createSeries():299 time : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,477Z lrauvNc4ToNetcdf.py createSeries():299 depth : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,528Z lrauvNc4ToNetcdf.py createSeries():299 time : 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,564Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:05,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:07:05,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:07:05,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:07:05,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:07:05,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:07:05,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:07:05,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_average_current empty so skipping INFO 2024-04-09 23:07:05,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:05,590Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:05,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:05,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:05,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:05,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:07:05,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:07:05,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:07:05,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:07:05,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:07:05,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:07:05,610Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,613Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:05,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:05,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:07:05,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:07:05,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:07:05,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:07:05,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:07:05,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:05,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:05,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:07:05,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude empty so skipping INFO 2024-04-09 23:07:05,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude empty so skipping INFO 2024-04-09 23:07:05,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable depth empty so skipping INFO 2024-04-09 23:07:05,656Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,693Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:05,710Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,746Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:05,763Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 4 v_t values found before 2020-10-10 16:18:00 and after 2020-10-10 16:20:00 INFO 2024-04-09 23:07:05,800Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:05,801Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T161845/202010101618_202010101620.nc4 INFO 2024-04-09 23:07:05,847Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 0 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:05,892Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T161845/202010101618_202010101620.nc4 INFO 2024-04-09 23:07:05,893Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:07:05,893Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:07:05,910Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201010T151856/20201010T172001/data.csv INFO 2024-04-09 23:07:06,006Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database ERROR 2024-04-09 23:07:06,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1391 array of sample points is empty ERROR 2024-04-09 23:07:06,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1392 Not creating /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T161845/202010101618_202010101620_2S_scieng.nc INFO 2024-04-09 23:07:06,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162551/202010101626_202010101627.nc4 file... INFO 2024-04-09 23:07:06,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010101626_202010101627.nc4 INFO 2024-04-09 23:07:06,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162551/202010101626_202010101627.nc4 INFO 2024-04-09 23:07:06,558Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,607Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,690Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,739Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,821Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,873Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:06,958Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,008Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:07,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:07:07,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:07:07,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:07:07,049Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:07:07,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:07:07,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:07:07,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_average_current empty so skipping INFO 2024-04-09 23:07:07,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:07,063Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 7 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:07,067Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 6 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:07,071Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 7 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:07,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:07,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:07:07,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:07:07,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:07:07,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:07:07,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:07:07,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:07:07,087Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:07,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:07,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:07:07,095Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:07:07,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:07:07,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:07:07,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:07:07,100Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:07,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:07:07,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:07:07,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude empty so skipping INFO 2024-04-09 23:07:07,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude empty so skipping INFO 2024-04-09 23:07:07,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable depth empty so skipping INFO 2024-04-09 23:07:07,127Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,162Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:07,178Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,214Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:07,230Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 33 v_t values found before 2020-10-10 16:26:00 and after 2020-10-10 16:27:00 INFO 2024-04-09 23:07:07,266Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:07,267Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162551/202010101626_202010101627.nc4 INFO 2024-04-09 23:07:07,310Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 0 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:07,357Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162551/202010101626_202010101627.nc4 INFO 2024-04-09 23:07:07,357Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:07:07,357Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:07:07,373Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201010T152603/20201010T172713/data.csv INFO 2024-04-09 23:07:07,468Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database ERROR 2024-04-09 23:07:07,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1391 array of sample points is empty ERROR 2024-04-09 23:07:07,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1392 Not creating /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162551/202010101626_202010101627_2S_scieng.nc INFO 2024-04-09 23:07:07,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162715/202010101627_202010101704.nc4 file... INFO 2024-04-09 23:07:07,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010101627_202010101704.nc4 INFO 2024-04-09 23:07:08,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162715/202010101627_202010101704.nc4 INFO 2024-04-09 23:07:08,271Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,329Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,386Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,442Z lrauvNc4ToNetcdf.py createSeries():299 time : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,499Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,557Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,611Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,666Z lrauvNc4ToNetcdf.py createSeries():299 time : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,719Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,772Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,826Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,881Z lrauvNc4ToNetcdf.py createSeries():299 time : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,938Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:08,995Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,049Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,102Z lrauvNc4ToNetcdf.py createSeries():299 time : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:09,144Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:09,148Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:09,153Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:09,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:09,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:09,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:09,179Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:09,183Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 26 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:09,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:09,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:09,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:09,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:09,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:09,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:09,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:09,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:09,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:09,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:09,235Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:09,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:09,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:09,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:09,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:09,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:09,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:09,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:09,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:09,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:09,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:09,293Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:09,295Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:09,304Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:09,314Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,321Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:09,346Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,387Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:09,404Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,447Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:09,468Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 67 v_t values found before 2020-10-10 16:27:00 and after 2020-10-10 17:04:00 INFO 2024-04-09 23:07:09,516Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:09,516Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162715/202010101627_202010101704.nc4 INFO 2024-04-09 23:07:09,612Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 5235 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:09,696Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162715/202010101627_202010101704.nc4 INFO 2024-04-09 23:07:09,697Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:09,698Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:07:09,698Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 0.0000135 0.0001105 176 1.26 10.10 16.20 2020-10-10 16:30:19.010196924 INFO 2024-04-09 23:07:09,701Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.376 0.0023590 0.0006860 5050 34.06 2.35 3.73 2020-10-10 17:04:23.212274075 INFO 2024-04-09 23:07:09,704Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 8 0.05 - - INFO 2024-04-09 23:07:09,704Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 5234 INFO 2024-04-09 23:07:09,723Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201010T152724/20201010T180426/data.csv INFO 2024-04-09 23:07:09,817Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:09,821Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:10,385Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:11,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T162715/202010101627_202010101704_2S_scieng.nc INFO 2024-04-09 23:07:11,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010101627_202010101704.nc4 INFO 2024-04-09 23:07:12,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T170428/202010101704_202010112321.nc4 file... INFO 2024-04-09 23:07:12,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010101704_202010112321.nc4 INFO 2024-04-09 23:07:13,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T170428/202010101704_202010112321.nc4 INFO 2024-04-09 23:07:13,369Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:13,612Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:13,848Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:14,072Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:14,278Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:14,456Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:14,646Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:14,834Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,002Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,177Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,337Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,498Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,661Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,828Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:15,999Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:16,173Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:16,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:16,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:16,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:16,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:16,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:16,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:16,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:16,446Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:16,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:16,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:16,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:16,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:16,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:16,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:16,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:16,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:16,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:16,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:16,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:16,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:16,973Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:17,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:17,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:17,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:17,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:17,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:17,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:17,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:17,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:17,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:17,673Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:17,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:17,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:17,726Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:17,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:17,939Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:18,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:18,156Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:18,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:18,394Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:18,596Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:18,665Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:18,867Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:18,933Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 100 v_t values found before 2020-10-10 17:04:00 and after 2020-10-11 23:21:00 INFO 2024-04-09 23:07:19,129Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:19,130Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T170428/202010101704_202010112321.nc4 INFO 2024-04-09 23:07:19,508Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 269404 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:19,604Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 83 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T170428/202010101704_202010112321.nc4 INFO 2024-04-09 23:07:19,604Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:19,606Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:07:19,608Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 -0.0000708 0.0001497 172 1.29 13.51 21.46 2020-10-10 17:07:45.721838951 INFO 2024-04-09 23:07:19,612Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.389 -0.0000145 0.0005345 808 5.49 11.36 18.04 2020-10-10 17:13:15.501091003 INFO 2024-04-09 23:07:19,616Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.383 0.0000720 0.0010643 1279 8.61 14.46 22.92 2020-10-10 17:21:52.233196020 INFO 2024-04-09 23:07:19,619Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.399 0.0003790 0.0050895 9116 61.38 9.72 15.37 2020-10-10 18:23:15.199150085 INFO 2024-04-09 23:07:19,623Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.376 0.0003157 0.0003080 499 3.58 10.08 15.93 2020-10-10 18:26:50.609220028 INFO 2024-04-09 23:07:19,627Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.382 0.0028814 0.0033952 9630 64.84 6.18 9.70 2020-10-10 19:31:41.190321922 INFO 2024-04-09 23:07:19,631Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.383 0.0000752 0.0000050 77 0.51 1.15 1.81 2020-10-10 19:32:12.354130030 INFO 2024-04-09 23:07:19,636Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.379 -0.0001469 0.0024271 10136 68.24 4.24 6.59 2020-10-10 20:40:27.434578896 INFO 2024-04-09 23:07:19,641Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.369 0.0000935 0.0000013 94 0.66 0.24 0.38 2020-10-10 20:41:07.331537962 INFO 2024-04-09 23:07:19,645Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.376 -0.0038264 0.0058057 10162 68.45 10.01 15.72 2020-10-10 21:49:34.694691896 INFO 2024-04-09 23:07:19,650Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.382 0.0001537 -0.0000293 272 1.83 -1.90 -2.98 2020-10-10 21:51:24.635660887 INFO 2024-04-09 23:07:19,653Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.373 0.0004208 -0.0000944 764 5.14 -2.17 -3.40 2020-10-10 21:56:33.371839046 INFO 2024-04-09 23:07:19,657Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.378 0.0000450 -0.0000288 83 0.55 -6.16 -9.67 2020-10-10 21:57:06.910361052 INFO 2024-04-09 23:07:19,660Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.367 -0.0018167 0.0051572 10575 71.20 8.35 13.42 2020-10-10 23:08:19.345698118 INFO 2024-04-09 23:07:19,665Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.374 0.0000695 -0.0000327 107 0.71 -5.27 -8.47 2020-10-10 23:09:02.598438025 INFO 2024-04-09 23:07:19,669Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.370 -0.0018960 0.0057324 10182 68.55 9.41 15.49 2020-10-11 00:17:36.176810980 INFO 2024-04-09 23:07:19,674Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.368 0.0001183 0.0000955 203 1.42 7.56 12.45 2020-10-11 00:19:01.852394104 INFO 2024-04-09 23:07:19,678Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.376 0.0000067 0.0020709 4748 31.96 7.28 12.01 2020-10-11 00:51:00.068265915 INFO 2024-04-09 23:07:19,682Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.381 0.0006018 0.0001857 816 5.49 3.80 6.27 2020-10-11 00:56:29.730133057 INFO 2024-04-09 23:07:19,685Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.396 0.0005978 0.0067427 9606 64.68 11.60 19.32 2020-10-11 02:01:10.818450928 INFO 2024-04-09 23:07:19,690Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.361 0.0002122 0.0002175 303 2.15 11.26 18.75 2020-10-11 02:03:20.178482056 INFO 2024-04-09 23:07:19,693Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.374 0.0017822 0.0044607 9843 66.27 7.67 12.47 2020-10-11 03:09:36.822544098 INFO 2024-04-09 23:07:19,698Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.314 0.0000777 -0.0000225 501 3.48 -0.74 -1.20 2020-10-11 03:13:06.314377069 INFO 2024-04-09 23:07:19,701Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.441 0.0044416 0.0047847 10649 71.70 7.71 12.37 2020-10-11 04:24:48.625994921 INFO 2024-04-09 23:07:19,706Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.362 0.0000632 0.0000300 83 0.55 6.25 10.03 2020-10-11 04:25:22.369803905 INFO 2024-04-09 23:07:19,709Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.392 0.0030102 0.0031144 10080 67.87 5.32 8.50 2020-10-11 05:33:14.917660952 INFO 2024-04-09 23:07:19,713Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.346 -0.0000165 0.0000303 178 1.22 2.88 4.60 2020-10-11 05:34:28.611176968 INFO 2024-04-09 23:07:19,717Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.390 0.0011698 0.0018623 5289 35.61 6.05 9.69 2020-10-11 06:10:05.382128 INFO 2024-04-09 23:07:19,721Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.390 0.0005148 0.0031332 9631 64.85 5.61 8.95 2020-10-11 07:14:56.772027969 INFO 2024-04-09 23:07:19,726Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.380 -0.0002125 0.0000953 433 3.08 3.60 5.74 2020-10-11 07:18:01.929276943 INFO 2024-04-09 23:07:19,730Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.382 -0.0000746 0.0035380 12270 82.62 4.98 7.93 2020-10-11 08:40:39.682209969 INFO 2024-04-09 23:07:19,735Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.377 -0.0003173 0.0000498 818 5.50 1.05 1.68 2020-10-11 08:46:10.226200104 INFO 2024-04-09 23:07:19,739Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.373 -0.0002927 0.0001060 822 5.53 2.23 3.55 2020-10-11 08:51:42.381439924 INFO 2024-04-09 23:07:19,743Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.374 -0.0002923 0.0001072 818 5.50 2.27 3.61 2020-10-11 08:57:12.862318039 INFO 2024-04-09 23:07:19,747Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.351 -0.0002920 0.0001220 815 5.48 2.59 4.12 2020-10-11 09:02:42.158570051 INFO 2024-04-09 23:07:19,750Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.382 -0.0002930 0.0001267 817 5.49 2.68 4.27 2020-10-11 09:08:12.194124937 INFO 2024-04-09 23:07:19,754Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.387 -0.0003102 0.0001550 848 5.70 3.16 5.04 2020-10-11 09:13:54.833200932 INFO 2024-04-09 23:07:19,758Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.388 -0.0002033 0.0002318 818 5.50 4.91 7.81 2020-10-11 09:19:25.305386066 INFO 2024-04-09 23:07:19,762Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.383 -0.0002102 0.0002697 816 5.49 5.72 9.11 2020-10-11 09:24:54.977376938 INFO 2024-04-09 23:07:19,766Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.383 -0.0001575 0.0003373 818 5.50 7.14 11.36 2020-10-11 09:30:25.474039078 INFO 2024-04-09 23:07:19,770Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.382 -0.0001398 0.0004060 816 5.49 8.63 13.71 2020-10-11 09:35:55.150034904 INFO 2024-04-09 23:07:19,774Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.378 -0.0001562 0.0004263 816 5.49 9.06 14.39 2020-10-11 09:41:24.830152988 INFO 2024-04-09 23:07:19,778Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.382 -0.0001780 0.0004117 816 5.49 8.75 13.90 2020-10-11 09:46:54.498037100 INFO 2024-04-09 23:07:19,782Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.380 -0.0000786 0.0001978 400 2.69 8.60 13.64 2020-10-11 09:49:36.104255915 INFO 2024-04-09 23:07:19,786Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.372 -0.0000093 0.0000320 76 0.51 7.39 11.73 2020-10-11 09:50:06.829560041 INFO 2024-04-09 23:07:19,790Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.392 -0.0004582 0.0039534 7864 52.94 8.59 13.84 2020-10-11 10:43:03.927179098 INFO 2024-04-09 23:07:19,795Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.392 -0.0000060 -0.0000003 7 0.04 -0.94 -1.52 2020-10-11 10:43:06.795197964 INFO 2024-04-09 23:07:19,799Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.370 -0.0024646 -0.0000594 8057 54.24 -0.13 -0.20 2020-10-11 11:37:21.909636021 INFO 2024-04-09 23:07:19,804Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.325 -0.0001168 0.0000137 171 1.15 1.37 2.21 2020-10-11 11:38:31.115657091 INFO 2024-04-09 23:07:19,808Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.383 -0.0002169 -0.0000036 371 2.49 -0.17 -0.27 2020-10-11 11:41:00.954471111 INFO 2024-04-09 23:07:19,811Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.327 -0.0000347 0.0000212 83 0.55 4.41 7.09 2020-10-11 11:41:34.569583893 INFO 2024-04-09 23:07:19,815Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.372 -0.0019007 0.0002581 6966 46.90 0.63 1.02 2020-10-11 12:28:28.861498117 INFO 2024-04-09 23:07:19,819Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.377 -0.0002043 0.0000917 418 2.95 3.58 5.75 2020-10-11 12:31:26.453304052 INFO 2024-04-09 23:07:19,823Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.380 -0.0015319 0.0000535 8077 54.38 0.11 0.18 2020-10-11 13:25:49.697777033 INFO 2024-04-09 23:07:19,828Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.373 -0.0000222 0.0000122 78 0.52 2.70 4.34 2020-10-11 13:26:21.246566057 INFO 2024-04-09 23:07:19,833Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.367 -0.0002075 0.0015476 7916 53.30 3.35 5.38 2020-10-11 14:19:39.453582048 INFO 2024-04-09 23:07:19,837Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.340 0.0000130 0.0000410 78 0.52 9.11 14.62 2020-10-11 14:20:11.008245944 INFO 2024-04-09 23:07:19,841Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.360 0.0012920 0.0027995 8230 55.41 5.84 9.36 2020-10-11 15:15:36.013847113 INFO 2024-04-09 23:07:19,846Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.397 0.0000082 0.0000688 77 0.51 15.55 24.91 2020-10-11 15:16:07.109421015 INFO 2024-04-09 23:07:19,851Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.373 0.0022970 0.0037464 7828 52.70 8.23 13.17 2020-10-11 16:08:49.770585060 INFO 2024-04-09 23:07:19,855Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.377 0.0000408 0.0000687 99 0.66 12.05 19.28 2020-10-11 16:09:29.766657114 INFO 2024-04-09 23:07:19,859Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.366 0.0034282 0.0034754 8039 54.12 7.43 11.90 2020-10-11 17:03:37.586579084 INFO 2024-04-09 23:07:19,863Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.358 -0.0000037 -0.0000010 8 0.05 -2.39 -3.82 2020-10-11 17:03:40.871077061 INFO 2024-04-09 23:07:19,867Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.385 0.0030161 0.0034830 8092 54.48 7.40 11.85 2020-10-11 17:58:10.066992998 INFO 2024-04-09 23:07:19,872Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.390 0.0003082 0.0003242 905 6.09 6.17 9.87 2020-10-11 18:04:15.745404959 INFO 2024-04-09 23:07:19,876Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.371 0.0002892 0.0003093 817 5.50 6.52 10.43 2020-10-11 18:09:45.877305031 INFO 2024-04-09 23:07:19,880Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.377 0.0005971 0.0047988 9972 67.14 8.33 13.24 2020-10-11 19:16:54.775346994 INFO 2024-04-09 23:07:19,885Z lrauvNc4ToNetcdf.py nudge_coords():840 67: 0.379 0.0000352 -0.0000102 124 0.83 -1.43 -2.27 2020-10-11 19:17:44.914154053 INFO 2024-04-09 23:07:19,889Z lrauvNc4ToNetcdf.py nudge_coords():840 68: 0.372 -0.0003074 0.0057288 10509 70.76 9.45 15.00 2020-10-11 20:28:30.770539045 INFO 2024-04-09 23:07:19,894Z lrauvNc4ToNetcdf.py nudge_coords():840 69: 0.370 0.0000462 0.0000098 108 0.72 1.59 2.53 2020-10-11 20:29:14.414688110 INFO 2024-04-09 23:07:19,898Z lrauvNc4ToNetcdf.py nudge_coords():840 70: 0.387 0.0005070 0.0000651 859 5.78 1.31 2.09 2020-10-11 20:35:01.438044071 INFO 2024-04-09 23:07:19,903Z lrauvNc4ToNetcdf.py nudge_coords():840 71: 0.373 0.0003183 0.0000711 791 5.32 1.56 2.48 2020-10-11 20:40:21.029304981 INFO 2024-04-09 23:07:19,907Z lrauvNc4ToNetcdf.py nudge_coords():840 72: 0.387 0.0002515 0.0000328 553 3.72 1.03 1.64 2020-10-11 20:44:04.626111984 INFO 2024-04-09 23:07:19,912Z lrauvNc4ToNetcdf.py nudge_coords():840 73: 0.377 0.0000003 -0.0000007 38 0.25 -0.31 -0.50 2020-10-11 20:44:19.981098890 INFO 2024-04-09 23:07:19,916Z lrauvNc4ToNetcdf.py nudge_coords():840 74: 0.383 0.0001899 0.0000192 480 3.23 0.70 1.11 2020-10-11 20:47:33.919106007 INFO 2024-04-09 23:07:19,920Z lrauvNc4ToNetcdf.py nudge_coords():840 75: 0.385 0.0001003 0.0000198 237 1.59 1.46 2.31 2020-10-11 20:49:09.669420958 INFO 2024-04-09 23:07:19,925Z lrauvNc4ToNetcdf.py nudge_coords():840 76: 0.369 0.0001189 -0.0000078 212 1.42 -0.64 -1.02 2020-10-11 20:50:35.333477974 INFO 2024-04-09 23:07:19,930Z lrauvNc4ToNetcdf.py nudge_coords():840 77: 0.370 0.0000470 0.0000145 172 1.15 1.47 2.33 2020-10-11 20:51:44.830776930 INFO 2024-04-09 23:07:19,934Z lrauvNc4ToNetcdf.py nudge_coords():840 78: 0.372 0.0039463 0.0082246 10569 71.16 13.12 21.42 2020-10-11 22:02:54.769620895 INFO 2024-04-09 23:07:19,939Z lrauvNc4ToNetcdf.py nudge_coords():840 79: 0.371 0.0004523 0.0000182 871 5.86 0.35 0.57 2020-10-11 22:08:46.701622963 INFO 2024-04-09 23:07:19,943Z lrauvNc4ToNetcdf.py nudge_coords():840 80: 0.383 0.0004201 0.0007174 9544 64.26 1.24 2.07 2020-10-11 23:13:02.557508945 INFO 2024-04-09 23:07:19,948Z lrauvNc4ToNetcdf.py nudge_coords():840 81: 0.391 -0.0000282 -0.0003933 823 5.53 -7.86 -13.17 2020-10-11 23:18:35.042131901 INFO 2024-04-09 23:07:19,952Z lrauvNc4ToNetcdf.py nudge_coords():871 83: - - - 457 3.07 - - INFO 2024-04-09 23:07:19,953Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 269403 INFO 2024-04-09 23:07:19,980Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201010T160438/20201012T002140/data.csv INFO 2024-04-09 23:07:20,083Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:20,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:21,020Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:23,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201010T170428/202010101704_202010112321_2S_scieng.nc INFO 2024-04-09 23:07:23,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010101704_202010112321.nc4 INFO 2024-04-09 23:07:24,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201011T232140/202010112321_202010121835.nc4 file... INFO 2024-04-09 23:07:24,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010112321_202010121835.nc4 INFO 2024-04-09 23:07:25,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201011T232140/202010112321_202010121835.nc4 INFO 2024-04-09 23:07:25,487Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:25,692Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:25,884Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,077Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,253Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,427Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,610Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,770Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:26,940Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,098Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,256Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,421Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,581Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,758Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:27,908Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,058Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:28,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:28,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:28,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:28,227Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 45 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:28,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:28,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:28,311Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:28,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:28,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:28,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:28,373Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 13 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:28,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:28,573Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 46 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:28,633Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 46 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:28,682Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 10 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:28,706Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 10 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:28,729Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 10 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:28,753Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 10 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:28,799Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:28,931Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:28,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:28,993Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:29,054Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:29,116Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:29,177Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:29,237Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:29,289Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:29,335Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 42 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:29,385Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:29,400Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:29,419Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:29,443Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:29,593Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:29,744Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:29,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:29,937Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 114 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:30,114Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:30,174Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 114 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:30,333Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:30,396Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 114 v_t values found before 2020-10-11 23:21:00 and after 2020-10-12 18:35:00 INFO 2024-04-09 23:07:30,560Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:30,561Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201011T232140/202010112321_202010121835.nc4 INFO 2024-04-09 23:07:30,904Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 170781 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:31,043Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 41 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201011T232140/202010112321_202010121835.nc4 INFO 2024-04-09 23:07:31,043Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:31,045Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:07:31,047Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.372 -0.0026446 0.0016415 9603 64.66 2.80 4.70 2020-10-12 00:28:46.117456913 INFO 2024-04-09 23:07:31,054Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.342 0.0000055 0.0000408 1274 9.29 0.49 0.81 2020-10-12 00:38:03.647064924 INFO 2024-04-09 23:07:31,058Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.375 -0.0035904 0.0024305 10192 68.62 3.99 6.56 2020-10-12 01:46:41.461868048 INFO 2024-04-09 23:07:31,064Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.382 -0.0000268 -0.0000072 195 1.48 -0.55 -0.90 2020-10-12 01:48:10.577389956 INFO 2024-04-09 23:07:31,069Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.387 -0.0025936 0.0024097 9915 66.76 4.15 6.69 2020-10-12 02:54:56.526243924 INFO 2024-04-09 23:07:31,075Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.318 -0.0000293 0.0000837 271 1.97 4.90 7.88 2020-10-12 02:56:54.946496010 INFO 2024-04-09 23:07:31,079Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.364 0.0004968 0.0034331 9307 62.66 6.32 10.15 2020-10-12 03:59:35.174226999 INFO 2024-04-09 23:07:31,085Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.364 0.0000338 0.0001335 386 2.74 5.62 9.02 2020-10-12 04:02:20.040795088 INFO 2024-04-09 23:07:31,088Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.362 -0.0000142 0.0000345 43 0.28 14.02 22.53 2020-10-12 04:02:37.442028046 INFO 2024-04-09 23:07:31,093Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.370 0.0030902 0.0018919 10068 67.79 3.27 5.17 2020-10-12 05:10:25.406934023 INFO 2024-04-09 23:07:31,098Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.286 -0.0000580 0.0000107 87 0.59 2.10 3.33 2020-10-12 05:11:01.430603027 INFO 2024-04-09 23:07:31,102Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.389 -0.0005612 0.0001596 760 5.11 3.65 5.78 2020-10-12 05:16:08.406500101 INFO 2024-04-09 23:07:31,106Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.377 -0.0000527 0.0000173 86 0.57 3.54 5.61 2020-10-12 05:16:43.158915997 INFO 2024-04-09 23:07:31,110Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.376 -0.0007812 0.0001098 752 5.06 2.54 4.02 2020-10-12 05:21:46.980609894 INFO 2024-04-09 23:07:31,113Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.386 -0.0000658 0.0000187 114 0.76 2.87 4.54 2020-10-12 05:22:33.046415091 INFO 2024-04-09 23:07:31,117Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 -0.0006001 0.0001355 716 4.81 3.30 5.22 2020-10-12 05:27:22.346199989 INFO 2024-04-09 23:07:31,121Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.386 -0.0000542 0.0000053 61 0.40 1.55 2.45 2020-10-12 05:27:46.978010893 INFO 2024-04-09 23:07:31,125Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.374 0.0014175 0.0001322 9758 65.70 0.24 0.37 2020-10-12 06:33:29.326574087 INFO 2024-04-09 23:07:31,131Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.389 -0.0007625 0.0006408 1355 9.29 8.19 12.78 2020-10-12 06:42:47.078258038 INFO 2024-04-09 23:07:31,136Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 -0.0020483 0.0027857 10388 69.94 4.70 7.38 2020-10-12 07:52:43.934742928 INFO 2024-04-09 23:07:31,142Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.368 -0.0000482 0.0000447 86 0.58 9.12 14.31 2020-10-12 07:53:19.032623053 INFO 2024-04-09 23:07:31,147Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.380 -0.0011432 0.0041863 10175 68.51 7.05 11.32 2020-10-12 09:01:49.817343950 INFO 2024-04-09 23:07:31,153Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.369 -0.0000647 0.0000075 93 0.65 1.33 2.13 2020-10-12 09:02:29.400453091 INFO 2024-04-09 23:07:31,158Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.401 -0.0029184 0.0015302 10415 70.12 2.45 4.04 2020-10-12 10:12:37.176366091 INFO 2024-04-09 23:07:31,164Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.370 -0.0000368 -0.0000172 84 0.56 -3.46 -5.69 2020-10-12 10:13:11.129703998 INFO 2024-04-09 23:07:31,168Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.368 -0.0002146 -0.0000923 760 5.11 -2.03 -3.35 2020-10-12 10:18:18.181644917 INFO 2024-04-09 23:07:31,171Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.390 -0.0000445 0.0000223 84 0.56 4.47 7.36 2020-10-12 10:18:52.290393114 INFO 2024-04-09 23:07:31,175Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.363 -0.0008826 -0.0001394 1115 7.50 -2.09 -3.44 2020-10-12 10:26:22.870901108 INFO 2024-04-09 23:07:31,179Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.367 -0.0000532 -0.0000055 113 0.75 -0.82 -1.35 2020-10-12 10:27:08.537795067 INFO 2024-04-09 23:07:31,183Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.375 -0.0066590 -0.0032235 10844 73.02 -4.86 -8.18 2020-10-12 11:40:09.889476061 INFO 2024-04-09 23:07:31,190Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.387 -0.0073042 -0.0015316 10548 71.02 -2.37 -4.00 2020-10-12 12:51:11.527128935 INFO 2024-04-09 23:07:31,196Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.380 -0.0000098 0.0000232 82 0.55 4.67 7.87 2020-10-12 12:51:44.663506985 INFO 2024-04-09 23:07:31,201Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.373 -0.0071410 -0.0009062 9808 66.04 -1.55 -2.54 2020-10-12 13:57:47.382513046 INFO 2024-04-09 23:07:31,208Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.370 -0.0002765 0.0001627 380 2.82 6.50 10.70 2020-10-12 14:00:36.791028976 INFO 2024-04-09 23:07:31,213Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.325 -0.0029059 -0.0005161 10722 72.19 -0.82 -1.32 2020-10-12 15:12:48.687671900 INFO 2024-04-09 23:07:31,219Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.378 -0.0000015 0.0000592 80 0.53 12.73 20.53 2020-10-12 15:13:21.055241108 INFO 2024-04-09 23:07:31,223Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.383 0.0016068 0.0021711 9745 65.61 3.81 6.13 2020-10-12 16:18:58.174290895 INFO 2024-04-09 23:07:31,229Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.359 -0.0000038 0.0000883 103 0.69 14.82 23.82 2020-10-12 16:19:39.806060076 INFO 2024-04-09 23:07:31,234Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.379 0.0075604 0.0009641 9972 67.14 1.68 2.66 2020-10-12 17:26:48.721584082 INFO 2024-04-09 23:07:31,240Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.388 0.0000185 0.0000688 79 0.53 15.30 24.26 2020-10-12 17:27:20.652822971 INFO 2024-04-09 23:07:31,245Z lrauvNc4ToNetcdf.py nudge_coords():871 41: - - - 10161 68.41 - - INFO 2024-04-09 23:07:31,245Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 170780 INFO 2024-04-09 23:07:31,279Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201011T222140/20201012T193546/data.csv INFO 2024-04-09 23:07:31,380Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:31,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:31,888Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:32,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201011T232140/202010112321_202010121835_2S_scieng.nc INFO 2024-04-09 23:07:32,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010112321_202010121835.nc4 INFO 2024-04-09 23:07:32,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T183546/202010121835_202010122332.nc4 file... INFO 2024-04-09 23:07:32,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010121835_202010122332.nc4 INFO 2024-04-09 23:07:33,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T183546/202010121835_202010122332.nc4 INFO 2024-04-09 23:07:33,040Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,142Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,248Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,347Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,444Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,544Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,635Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,723Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,809Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,903Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:33,994Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,085Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,181Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,270Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,365Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,462Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:34,551Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:34,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:34,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:34,565Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 59 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:34,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:34,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:34,616Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:34,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:34,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:34,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:34,644Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 73 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:34,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:34,708Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 59 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:34,733Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 59 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:34,754Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 11 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:34,764Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 11 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,771Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:34,773Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 11 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:34,782Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 11 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:34,796Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:34,843Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:34,867Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:34,891Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:34,914Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:34,937Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:34,961Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:34,981Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:34,982Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:35,002Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 53 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:35,022Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:35,030Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:35,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:35,046Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:35,096Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:35,146Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:35,228Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,313Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:35,349Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,430Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:35,466Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 142 v_t values found before 2020-10-12 18:35:00 and after 2020-10-12 23:32:00 INFO 2024-04-09 23:07:35,554Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:35,556Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T183546/202010121835_202010122332.nc4 INFO 2024-04-09 23:07:35,720Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 44020 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:35,824Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T183546/202010121835_202010122332.nc4 INFO 2024-04-09 23:07:35,824Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:35,826Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:07:35,826Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.357 0.0000695 0.0000018 94 0.63 0.35 0.54 2020-10-12 18:36:25.092468023 INFO 2024-04-09 23:07:35,830Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.372 -0.0001965 0.0007639 10728 72.23 1.25 1.96 2020-10-12 19:48:39.337394953 INFO 2024-04-09 23:07:35,834Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.382 0.0000745 0.0000015 89 0.59 0.30 0.47 2020-10-12 19:49:15.378268957 INFO 2024-04-09 23:07:35,838Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.383 -0.0042193 0.0016701 10255 69.05 2.85 4.48 2020-10-12 20:58:18.517818927 INFO 2024-04-09 23:07:35,842Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.397 0.0000675 -0.0000365 103 0.69 -6.23 -9.78 2020-10-12 20:59:00.418255091 INFO 2024-04-09 23:07:35,846Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.388 0.0002865 -0.0003123 951 6.40 -5.76 -9.05 2020-10-12 21:05:24.649799109 INFO 2024-04-09 23:07:35,849Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.371 0.0000617 -0.0000388 133 0.95 -4.84 -7.61 2020-10-12 21:06:21.819519043 INFO 2024-04-09 23:07:35,853Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.375 -0.0001027 0.0009062 9976 67.17 1.60 2.50 2020-10-12 22:13:32.402384043 INFO 2024-04-09 23:07:35,858Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.339 0.0005655 -0.0004148 935 6.78 -7.25 -11.34 2020-10-12 22:20:19.541481972 INFO 2024-04-09 23:07:35,861Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.384 -0.0012915 0.0016397 9730 65.51 2.97 4.64 2020-10-12 23:25:50.574438095 INFO 2024-04-09 23:07:35,867Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 1025 7.13 - - INFO 2024-04-09 23:07:35,867Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 44019 INFO 2024-04-09 23:07:35,898Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201012T173546/20201013T003258/data.csv INFO 2024-04-09 23:07:35,994Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:36,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:36,350Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:36,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T183546/202010121835_202010122332_2S_scieng.nc INFO 2024-04-09 23:07:36,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010121835_202010122332.nc4 INFO 2024-04-09 23:07:38,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T233259/202010122332_202010141435.nc4 file... INFO 2024-04-09 23:07:38,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010122332_202010141435.nc4 INFO 2024-04-09 23:07:38,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T233259/202010122332_202010141435.nc4 INFO 2024-04-09 23:07:42,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:42,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:42,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:42,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:42,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:42,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:42,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:42,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:42,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:42,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:42,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:42,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:42,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:42,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:43,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:43,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:43,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:43,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:43,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:43,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:43,458Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:43,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:43,555Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:43,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:43,651Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:43,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:43,748Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:43,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:43,842Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:43,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:43,940Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:44,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:44,024Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:44,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:44,095Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 1 v_t values found before 2020-10-12 23:32:00 and after 2020-10-14 14:35:00 INFO 2024-04-09 23:07:44,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:44,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:44,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:44,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:44,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:44,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:45,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:45,364Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:45,677Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:45,986Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:45,987Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T233259/202010122332_202010141435.nc4 INFO 2024-04-09 23:07:46,480Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 345342 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:46,594Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 74 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T233259/202010122332_202010141435.nc4 INFO 2024-04-09 23:07:46,594Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:46,596Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:07:46,600Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 -0.0019136 0.0026894 10667 71.82 4.39 6.94 2020-10-13 00:52:27.302447081 INFO 2024-04-09 23:07:46,606Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.346 -0.0001145 -0.0000397 131 0.88 -5.30 -8.37 2020-10-13 00:53:20.350373030 INFO 2024-04-09 23:07:46,611Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.373 -0.0010967 -0.0002320 1211 8.15 -3.34 -5.27 2020-10-13 01:01:29.761410952 INFO 2024-04-09 23:07:46,616Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.358 -0.0042784 0.0034981 10719 72.17 5.56 8.98 2020-10-13 02:13:40.370414972 INFO 2024-04-09 23:07:46,623Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.382 -0.0001358 -0.0000100 129 0.87 -1.32 -2.13 2020-10-13 02:14:32.891562939 INFO 2024-04-09 23:07:46,628Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.378 -0.0057980 0.0036816 9494 63.92 6.46 10.67 2020-10-13 03:18:28.550405979 INFO 2024-04-09 23:07:46,634Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.383 -0.0001447 0.0000637 207 1.44 4.94 8.17 2020-10-13 03:19:55.618151903 INFO 2024-04-09 23:07:46,639Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.369 -0.0028452 0.0030816 6885 46.35 7.35 12.32 2020-10-13 04:06:17.217288971 INFO 2024-04-09 23:07:46,646Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.369 -0.0007876 0.0039730 10060 67.76 6.48 10.86 2020-10-13 05:14:03.385454893 INFO 2024-04-09 23:07:46,652Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.383 -0.0001037 0.0002172 308 2.07 11.61 19.45 2020-10-13 05:16:07.902101994 INFO 2024-04-09 23:07:46,656Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.374 -0.0001381 0.0004597 797 5.36 9.49 15.89 2020-10-13 05:21:29.918682098 INFO 2024-04-09 23:07:46,660Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.363 -0.0000095 0.0000480 68 0.45 11.71 19.61 2020-10-13 05:21:57.577166080 INFO 2024-04-09 23:07:46,665Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.375 0.0025305 0.0036751 9766 65.75 6.23 10.36 2020-10-13 06:27:43.175121069 INFO 2024-04-09 23:07:46,672Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.386 0.0000183 0.0000878 81 0.54 18.18 30.20 2020-10-13 06:28:15.902357101 INFO 2024-04-09 23:07:46,676Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.382 0.0021835 0.0024883 10104 68.03 4.20 6.78 2020-10-13 07:36:18.073714972 INFO 2024-04-09 23:07:46,683Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.361 0.0000717 0.0002155 185 1.32 18.68 30.17 2020-10-13 07:37:37.879740953 INFO 2024-04-09 23:07:46,687Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.366 0.0026735 0.0016082 9168 61.73 3.01 4.83 2020-10-13 08:39:21.881572962 INFO 2024-04-09 23:07:46,694Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.350 0.0000573 0.0002752 406 2.85 11.18 17.90 2020-10-13 08:42:13.166033983 INFO 2024-04-09 23:07:46,699Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.397 0.0035610 0.0032012 10516 70.80 5.20 8.38 2020-10-13 09:53:01.768390894 INFO 2024-04-09 23:07:46,706Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.346 0.0000215 0.0000705 83 0.55 14.68 23.64 2020-10-13 09:53:35.327312946 INFO 2024-04-09 23:07:46,711Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.381 0.0019996 0.0001386 10589 71.30 0.23 0.36 2020-10-13 11:04:53.675422907 INFO 2024-04-09 23:07:46,718Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.358 0.0000158 0.0000030 80 0.53 0.65 1.04 2020-10-13 11:05:26.019872904 INFO 2024-04-09 23:07:46,723Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.381 0.0021084 -0.0013329 10316 69.46 -2.25 -3.56 2020-10-13 12:14:53.975244999 INFO 2024-04-09 23:07:46,730Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.397 0.0000202 -0.0020597 3956 27.68 -8.72 -13.79 2020-10-13 12:42:35.327394962 INFO 2024-04-09 23:07:46,735Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.380 -0.0003445 -0.0007773 10454 70.39 -1.31 -2.05 2020-10-13 13:52:58.979439974 INFO 2024-04-09 23:07:46,743Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.327 -0.0000025 -0.0000527 79 0.53 -11.84 -18.55 2020-10-13 13:53:30.939376116 INFO 2024-04-09 23:07:46,747Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.369 -0.0017627 0.0022184 9997 67.31 3.83 6.11 2020-10-13 15:00:49.875480890 INFO 2024-04-09 23:07:46,754Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.366 -0.0000275 -0.0000197 79 0.53 -4.33 -6.91 2020-10-13 15:01:21.909728050 INFO 2024-04-09 23:07:46,759Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.371 -0.0025129 0.0019635 10446 70.33 3.16 5.17 2020-10-13 16:11:42.253669024 INFO 2024-04-09 23:07:46,766Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.378 0.0000123 0.0000093 163 1.10 0.96 1.58 2020-10-13 16:12:48.390276909 INFO 2024-04-09 23:07:46,771Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.386 -0.0027514 0.0034964 10579 71.23 5.43 9.10 2020-10-13 17:24:02.407005072 INFO 2024-04-09 23:07:46,778Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.371 0.0000043 0.0000143 79 0.53 3.02 5.05 2020-10-13 17:24:34.337502003 INFO 2024-04-09 23:07:46,783Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.379 -0.0003824 0.0039643 10427 70.21 6.29 10.46 2020-10-13 18:34:47.066313027 INFO 2024-04-09 23:07:46,791Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.349 0.0000507 0.0000577 105 0.70 9.16 15.25 2020-10-13 18:35:29.524538040 INFO 2024-04-09 23:07:46,798Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.380 0.0018543 0.0019097 10092 67.95 3.21 5.21 2020-10-13 19:43:26.733688116 INFO 2024-04-09 23:07:46,805Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.355 0.0001065 0.0000425 77 0.52 9.43 15.28 2020-10-13 19:43:58.046001911 INFO 2024-04-09 23:07:46,811Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.371 0.0026833 0.0012348 5082 34.21 4.15 6.69 2020-10-13 20:18:11.221577883 INFO 2024-04-09 23:07:46,817Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.382 0.0010007 0.0001808 846 5.69 3.65 5.89 2020-10-13 20:23:53.078210115 INFO 2024-04-09 23:07:46,822Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.382 0.0009248 0.0002143 817 5.49 4.48 7.23 2020-10-13 20:29:23.158571005 INFO 2024-04-09 23:07:46,827Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.378 0.0008805 0.0002592 837 5.63 5.29 8.53 2020-10-13 20:35:01.351049900 INFO 2024-04-09 23:07:46,832Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.382 0.0010065 0.0002380 816 5.49 4.99 8.04 2020-10-13 20:40:31.047096968 INFO 2024-04-09 23:07:46,837Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.374 0.0011240 0.0001952 859 5.78 3.89 6.26 2020-10-13 20:46:18.089301109 INFO 2024-04-09 23:07:46,843Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.375 0.0063005 0.0038300 10489 70.62 6.23 10.05 2020-10-13 21:56:55.705445051 INFO 2024-04-09 23:07:46,850Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.365 0.0000720 0.0000108 79 0.53 2.35 3.80 2020-10-13 21:57:27.798780918 INFO 2024-04-09 23:07:46,855Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.394 0.0047799 0.0035596 10311 69.42 5.85 9.50 2020-10-13 23:06:53.572006941 INFO 2024-04-09 23:07:46,862Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.362 0.0000717 -0.0000240 78 0.52 -5.26 -8.54 2020-10-13 23:07:25.218616009 INFO 2024-04-09 23:07:46,867Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.374 0.0030779 -0.0000500 9718 65.43 -0.09 -0.14 2020-10-14 00:12:51.362467051 INFO 2024-04-09 23:07:46,874Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.384 -0.0007957 -0.0007327 1765 12.69 -6.52 -10.70 2020-10-14 00:25:32.857489109 INFO 2024-04-09 23:07:46,879Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.372 -0.0001887 0.0004211 9352 62.96 0.74 1.24 2020-10-14 01:28:31.094315052 INFO 2024-04-09 23:07:46,886Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.380 -0.0003342 -0.0005805 989 7.23 -8.93 -14.88 2020-10-14 01:35:45.342322111 INFO 2024-04-09 23:07:46,891Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.369 0.0015786 -0.0017280 9694 65.27 -2.93 -4.91 2020-10-14 02:41:01.833436012 INFO 2024-04-09 23:07:46,898Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.397 -0.0007837 -0.0011317 2910 20.60 -6.06 -10.18 2020-10-14 03:01:38.518454074 INFO 2024-04-09 23:07:46,903Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.382 0.0012437 -0.0013255 9414 63.39 -2.29 -3.88 2020-10-14 04:05:02.058809996 INFO 2024-04-09 23:07:46,911Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.391 -0.0002277 -0.0002530 514 3.80 -7.29 -12.33 2020-10-14 04:08:50.523140907 INFO 2024-04-09 23:07:46,916Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.360 0.0041541 -0.0009962 9477 63.81 -1.69 -2.89 2020-10-14 05:12:39.337316036 INFO 2024-04-09 23:07:46,924Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.390 -0.0001000 -0.0002623 350 2.64 -10.76 -18.45 2020-10-14 05:15:17.822463989 INFO 2024-04-09 23:07:46,929Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.379 0.0010678 -0.0016776 9542 64.24 -2.85 -4.84 2020-10-14 06:19:32.874296904 INFO 2024-04-09 23:07:46,937Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.373 -0.0003900 -0.0001238 470 3.48 -3.89 -6.60 2020-10-14 06:23:01.869256020 INFO 2024-04-09 23:07:46,942Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.376 0.0015105 -0.0021551 9811 66.06 -3.66 -6.05 2020-10-14 07:29:05.789536953 INFO 2024-04-09 23:07:46,949Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.379 -0.0005307 -0.0000100 836 6.03 -0.19 -0.31 2020-10-14 07:35:07.741879940 INFO 2024-04-09 23:07:46,955Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.375 0.0042202 0.0015794 9555 64.33 2.74 4.55 2020-10-14 08:39:28.036514044 INFO 2024-04-09 23:07:46,962Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.374 -0.0006018 0.0001798 855 6.15 3.27 5.42 2020-10-14 08:45:37.238009930 INFO 2024-04-09 23:07:46,968Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.381 0.0019182 0.0020972 9902 66.67 3.48 5.83 2020-10-14 09:52:17.851622105 INFO 2024-04-09 23:07:46,975Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.374 -0.0012716 0.0004565 1426 10.16 4.97 8.32 2020-10-14 10:02:28.126656054 INFO 2024-04-09 23:07:46,980Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.375 -0.0008722 0.0021248 6364 42.84 5.47 9.19 2020-10-14 10:45:19.197366953 INFO 2024-04-09 23:07:46,987Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.391 -0.0017390 0.0002707 2118 14.54 2.05 3.45 2020-10-14 10:59:51.689416885 INFO 2024-04-09 23:07:46,993Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.391 -0.0007007 0.0001348 997 6.79 2.19 3.68 2020-10-14 11:06:39.473681927 INFO 2024-04-09 23:07:46,998Z lrauvNc4ToNetcdf.py nudge_coords():840 67: 0.386 -0.0009878 0.0002655 1530 10.46 2.80 4.70 2020-10-14 11:17:07.642502069 INFO 2024-04-09 23:07:47,003Z lrauvNc4ToNetcdf.py nudge_coords():840 68: 0.369 -0.0006098 0.0007851 5768 38.92 2.22 3.74 2020-10-14 11:56:03.007424116 INFO 2024-04-09 23:07:47,010Z lrauvNc4ToNetcdf.py nudge_coords():840 69: 0.324 -0.0002802 0.0003847 2292 16.01 2.65 4.45 2020-10-14 12:12:04.121617079 INFO 2024-04-09 23:07:47,016Z lrauvNc4ToNetcdf.py nudge_coords():840 70: 0.379 -0.0005941 0.0048326 12697 86.71 6.15 10.33 2020-10-14 13:38:46.985191107 INFO 2024-04-09 23:07:47,024Z lrauvNc4ToNetcdf.py nudge_coords():840 71: 0.375 0.0000330 0.0003163 598 4.24 8.24 13.83 2020-10-14 13:43:01.601214886 INFO 2024-04-09 23:07:47,029Z lrauvNc4ToNetcdf.py nudge_coords():840 72: 0.371 0.0000368 0.0003382 540 3.88 9.62 16.14 2020-10-14 13:46:54.913582087 INFO 2024-04-09 23:07:47,035Z lrauvNc4ToNetcdf.py nudge_coords():871 74: - - - 7140 48.07 - - INFO 2024-04-09 23:07:47,035Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 345341 INFO 2024-04-09 23:07:47,064Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201012T223259/20201014T153459/data.csv INFO 2024-04-09 23:07:47,165Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:47,183Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:47,948Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:48,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201012T233259/202010122332_202010141435_2S_scieng.nc INFO 2024-04-09 23:07:48,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010122332_202010141435.nc4 INFO 2024-04-09 23:07:50,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201014T143500/202010141435_202010160119.nc4 file... INFO 2024-04-09 23:07:50,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010141435_202010160119.nc4 INFO 2024-04-09 23:07:50,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201014T143500/202010141435_202010160119.nc4 INFO 2024-04-09 23:07:50,528Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:50,760Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:50,999Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:51,242Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:51,469Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:51,661Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:51,851Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:52,043Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:52,235Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:52,431Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:52,624Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:52,818Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,012Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,210Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,407Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,602Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:07:53,801Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:07:53,810Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:07:53,818Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:07:53,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:07:53,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:07:53,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:07:53,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:07:53,908Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:07:53,933Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:53,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:07:53,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:07:53,983Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 3 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:07:54,069Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:07:54,244Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:07:54,327Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:07:54,400Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 4 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:07:54,433Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 4 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:07:54,464Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 4 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:07:54,495Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 4 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:07:54,562Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:07:54,759Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:07:54,847Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:07:54,930Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:54,999Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:07:55,012Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:07:55,105Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:07:55,189Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:07:55,261Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,321Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:07:55,323Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 22 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:07:55,387Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:55,408Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:07:55,427Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:55,472Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:55,724Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:55,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:55,962Z lrauvNc4ToNetcdf.py createSeries():299 depth : 65 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:56,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:07:56,233Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:56,460Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:56,535Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:56,766Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:56,840Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 64 v_t values found before 2020-10-14 14:35:00 and after 2020-10-16 01:19:00 INFO 2024-04-09 23:07:57,066Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:07:57,068Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201014T143500/202010141435_202010160119.nc4 INFO 2024-04-09 23:07:57,516Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 306898 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:07:57,629Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 83 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201014T143500/202010141435_202010160119.nc4 INFO 2024-04-09 23:07:57,630Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:07:57,632Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2472 16.64 - - - INFO 2024-04-09 23:07:57,634Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.383 0.0000460 0.0000937 1759 12.62 0.80 1.38 2020-10-14 15:04:16.270097017 INFO 2024-04-09 23:07:57,639Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.374 0.0002503 0.0022356 8074 54.67 4.38 7.58 2020-10-14 15:58:56.910387039 INFO 2024-04-09 23:07:57,645Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.383 -0.0000792 0.0003387 923 6.60 5.50 9.50 2020-10-14 16:05:33.481267929 INFO 2024-04-09 23:07:57,650Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.379 -0.0008624 0.0016287 10008 67.38 2.54 4.48 2020-10-14 17:12:56.754211903 INFO 2024-04-09 23:07:57,657Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.383 -0.0000290 -0.0002945 1937 13.57 -2.28 -4.02 2020-10-14 17:26:31.274102926 INFO 2024-04-09 23:07:57,662Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.382 -0.0022167 0.0018049 9495 63.93 2.91 5.23 2020-10-14 18:30:27.346108913 INFO 2024-04-09 23:07:57,668Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.388 -0.0008995 0.0001667 1037 7.51 2.29 4.11 2020-10-14 18:37:58.546025038 INFO 2024-04-09 23:07:57,673Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.374 -0.0049149 0.0029832 9993 67.28 4.54 8.22 2020-10-14 19:45:15.802346945 INFO 2024-04-09 23:07:57,679Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.354 -0.0008960 0.0002083 1462 10.32 2.07 3.74 2020-10-14 19:55:35.634296894 INFO 2024-04-09 23:07:57,684Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.378 -0.0073768 0.0025534 9513 64.05 4.13 7.39 2020-10-14 20:59:38.906291962 INFO 2024-04-09 23:07:57,690Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.378 -0.0004200 0.0001603 1458 10.40 1.60 2.86 2020-10-14 21:10:03.542325974 INFO 2024-04-09 23:07:57,694Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.380 -0.0076924 0.0021673 9636 64.88 3.48 6.19 2020-10-14 22:14:56.540262938 INFO 2024-04-09 23:07:57,701Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.386 -0.0001652 -0.0000313 572 4.22 -0.77 -1.38 2020-10-14 22:19:09.842216969 INFO 2024-04-09 23:07:57,706Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.375 -0.0067993 -0.0006098 9483 63.85 -0.99 -1.77 2020-10-14 23:23:01.054158926 INFO 2024-04-09 23:07:57,713Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.377 -0.0027505 -0.0031412 3671 25.84 -12.56 -22.52 2020-10-14 23:48:52.141386032 INFO 2024-04-09 23:07:57,718Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.372 -0.0128655 -0.0003163 9679 65.17 -0.50 -0.90 2020-10-15 00:54:02.541567087 INFO 2024-04-09 23:07:57,724Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.371 -0.0025512 -0.0026152 3278 23.09 -11.68 -20.98 2020-10-15 01:17:08.501630068 INFO 2024-04-09 23:07:57,729Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.387 -0.0056378 0.0005699 4940 33.26 1.77 3.18 2020-10-15 01:50:24.301501989 INFO 2024-04-09 23:07:57,733Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.383 -0.0016470 -0.0011495 1687 11.74 -10.10 -18.14 2020-10-15 02:02:09.117224932 INFO 2024-04-09 23:07:57,738Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 -0.0010500 -0.0006665 1109 7.54 -9.10 -16.37 2020-10-15 02:09:42.137312889 INFO 2024-04-09 23:07:57,742Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.383 -0.0047192 0.0002165 5475 37.08 0.61 1.08 2020-10-15 02:46:47.534121990 INFO 2024-04-09 23:07:57,748Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.376 -0.0030310 -0.0014572 2207 15.44 -9.81 -17.49 2020-10-15 03:02:14.288259983 INFO 2024-04-09 23:07:57,753Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 -0.0011090 -0.0005870 848 5.76 -10.58 -18.89 2020-10-15 03:08:00.194128036 INFO 2024-04-09 23:07:57,757Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.387 -0.0012047 -0.0005943 764 5.36 -11.50 -20.54 2020-10-15 03:13:22.293373108 INFO 2024-04-09 23:07:57,763Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.375 -0.0006408 -0.0002392 355 2.55 -9.72 -17.37 2020-10-15 03:15:55.738704920 INFO 2024-04-09 23:07:57,768Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.374 -0.0123540 0.0019579 9795 65.95 3.11 5.50 2020-10-15 04:21:53.250660896 INFO 2024-04-09 23:07:57,775Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.365 -0.0024468 -0.0000485 1628 11.57 -0.44 -0.78 2020-10-15 04:33:28.103526115 INFO 2024-04-09 23:07:57,780Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.373 -0.0108859 0.0052083 10240 68.95 7.99 14.00 2020-10-15 05:42:25.295526981 INFO 2024-04-09 23:07:57,786Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.375 -0.0026532 0.0007367 1844 12.97 6.01 10.52 2020-10-15 05:55:23.953860998 INFO 2024-04-09 23:07:57,791Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.367 -0.0106091 0.0064556 10286 69.25 9.92 17.27 2020-10-15 07:04:39.578857899 INFO 2024-04-09 23:07:57,799Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.350 -0.0001937 0.0002410 297 2.14 11.99 20.87 2020-10-15 07:06:48.361820936 INFO 2024-04-09 23:07:57,803Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.369 -0.0018102 0.0019730 2516 17.59 11.98 20.79 2020-10-15 07:24:23.913830042 INFO 2024-04-09 23:07:57,808Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.372 -0.0080840 0.0096768 10308 69.40 14.79 25.84 2020-10-15 08:33:48.525572061 INFO 2024-04-09 23:07:57,815Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.376 -0.0007172 0.0006725 981 7.02 10.16 17.74 2020-10-15 08:40:50.401665926 INFO 2024-04-09 23:07:57,820Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.387 -0.0009020 0.0009680 1251 8.61 11.95 20.83 2020-10-15 08:49:27.398030996 INFO 2024-04-09 23:07:57,825Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.389 -0.0034609 0.0048361 6273 42.54 12.25 21.07 2020-10-15 09:32:00.122164011 INFO 2024-04-09 23:07:57,831Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.379 -0.0007785 0.0008448 1280 8.95 10.18 17.50 2020-10-15 09:40:57.357275009 INFO 2024-04-09 23:07:57,835Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.380 -0.0005377 0.0006123 1026 7.04 9.39 16.12 2020-10-15 09:48:00.186019897 INFO 2024-04-09 23:07:57,840Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.391 -0.0002007 0.0002438 334 2.49 10.56 18.12 2020-10-15 09:50:30.183031082 INFO 2024-04-09 23:07:57,844Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.371 -0.0002632 0.0003600 483 3.47 11.21 19.23 2020-10-15 09:53:58.769898891 INFO 2024-04-09 23:07:57,849Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.369 -0.0057037 0.0096900 10276 69.19 14.94 25.95 2020-10-15 11:03:10.346626997 INFO 2024-04-09 23:07:57,856Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.378 -0.0015330 0.0026218 3330 23.09 12.15 21.04 2020-10-15 11:26:16.263251065 INFO 2024-04-09 23:07:57,861Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.374 -0.0011133 0.0049732 5931 39.93 13.18 23.08 2020-10-15 12:06:12.467453957 INFO 2024-04-09 23:07:57,867Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.380 -0.0002597 0.0006340 875 6.22 10.79 18.88 2020-10-15 12:12:26.174902916 INFO 2024-04-09 23:07:57,872Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.379 -0.0009881 0.0074755 9539 64.23 12.16 21.57 2020-10-15 13:16:40.165759087 INFO 2024-04-09 23:07:57,880Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.380 0.0001263 0.0004580 598 4.25 11.27 19.99 2020-10-15 13:20:55.338383913 INFO 2024-04-09 23:07:57,885Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.390 -0.0021402 0.0068043 9668 65.09 10.71 19.37 2020-10-15 14:26:01.385288 INFO 2024-04-09 23:07:57,892Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.364 -0.0010352 0.0002240 2059 14.50 1.58 2.86 2020-10-15 14:40:32.069524050 INFO 2024-04-09 23:07:57,897Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.379 -0.0026586 0.0042544 9735 65.54 6.49 12.03 2020-10-15 15:46:05.118227959 INFO 2024-04-09 23:07:57,903Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.363 -0.0003853 -0.0000220 487 3.50 -0.63 -1.16 2020-10-15 15:49:35.757503033 INFO 2024-04-09 23:07:57,908Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.390 -0.0014787 0.0011371 7300 49.23 2.35 4.28 2020-10-15 16:38:49.966958046 INFO 2024-04-09 23:07:57,914Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.383 -0.0000120 0.0000027 10 0.06 4.47 8.13 2020-10-15 16:38:54.013370991 INFO 2024-04-09 23:07:57,918Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.371 -0.0000328 -0.0000007 30 0.20 -0.35 -0.63 2020-10-15 16:39:06.138212919 INFO 2024-04-09 23:07:57,923Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.383 -0.0000038 -0.0000032 11 0.07 -4.77 -8.67 2020-10-15 16:39:10.578218937 INFO 2024-04-09 23:07:57,927Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.387 -0.0014495 -0.0001610 1300 9.08 -1.81 -3.29 2020-10-15 16:48:15.814209938 INFO 2024-04-09 23:07:57,931Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.389 -0.0001115 -0.0000290 115 0.84 -3.52 -6.40 2020-10-15 16:49:06.563035965 INFO 2024-04-09 23:07:57,935Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.344 -0.0000755 -0.0000137 62 0.41 -3.38 -6.16 2020-10-15 16:49:31.654073954 INFO 2024-04-09 23:07:57,939Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.391 -0.0000173 -0.0000037 13 0.08 -4.60 -8.37 2020-10-15 16:49:36.874243975 INFO 2024-04-09 23:07:57,943Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.374 -0.0010853 -0.0001210 904 6.16 -2.00 -3.64 2020-10-15 16:55:47.070219040 INFO 2024-04-09 23:07:57,948Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.381 -0.0009814 -0.0002988 4876 32.92 -0.93 -1.68 2020-10-15 17:28:42.654144049 INFO 2024-04-09 23:07:57,952Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.383 -0.0002483 -0.0000425 1022 7.04 -0.62 -1.12 2020-10-15 17:35:45.713345051 INFO 2024-04-09 23:07:57,956Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.390 -0.0003338 -0.0001042 927 6.32 -1.68 -3.05 2020-10-15 17:42:05.294970989 INFO 2024-04-09 23:07:57,961Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.379 -0.0000622 -0.0000047 71 0.61 -0.78 -1.41 2020-10-15 17:42:42.533485889 INFO 2024-04-09 23:07:57,965Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.378 -0.0001315 -0.0000345 246 1.85 -1.91 -3.46 2020-10-15 17:44:33.650374889 INFO 2024-04-09 23:07:57,969Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.375 -0.0004549 -0.0009861 10010 67.39 -1.54 -2.71 2020-10-15 18:51:57.701556921 INFO 2024-04-09 23:07:57,976Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.381 0.0000377 0.0001153 411 2.98 4.08 7.16 2020-10-15 18:54:57.143130064 INFO 2024-04-09 23:07:57,982Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.365 0.0015849 -0.0017636 8041 54.14 -3.53 -6.04 2020-10-15 19:49:05.777471066 INFO 2024-04-09 23:07:57,988Z lrauvNc4ToNetcdf.py nudge_coords():840 67: 0.383 0.0012052 -0.0001337 1200 8.41 -1.72 -2.94 2020-10-15 19:57:30.806968927 INFO 2024-04-09 23:07:57,993Z lrauvNc4ToNetcdf.py nudge_coords():840 68: 0.379 0.0007315 -0.0001630 833 5.66 -3.12 -5.34 2020-10-15 20:03:10.673929930 INFO 2024-04-09 23:07:57,998Z lrauvNc4ToNetcdf.py nudge_coords():840 69: 0.377 0.0007175 0.0001063 852 5.79 1.99 3.41 2020-10-15 20:08:58.208178997 INFO 2024-04-09 23:07:58,002Z lrauvNc4ToNetcdf.py nudge_coords():840 70: 0.392 0.0009407 0.0001655 967 6.59 2.72 4.66 2020-10-15 20:15:33.865258932 INFO 2024-04-09 23:07:58,007Z lrauvNc4ToNetcdf.py nudge_coords():840 71: 0.372 0.0008178 0.0001875 822 5.58 3.64 6.22 2020-10-15 20:21:09.296272039 INFO 2024-04-09 23:07:58,011Z lrauvNc4ToNetcdf.py nudge_coords():840 72: 0.381 0.0002075 0.0000328 131 1.08 3.30 5.65 2020-10-15 20:22:14.268193960 INFO 2024-04-09 23:07:58,016Z lrauvNc4ToNetcdf.py nudge_coords():840 73: 0.384 0.0003953 0.0000827 314 2.25 3.99 6.82 2020-10-15 20:24:29.470217943 INFO 2024-04-09 23:07:58,020Z lrauvNc4ToNetcdf.py nudge_coords():840 74: 0.379 0.0011469 -0.0006527 2676 18.01 -3.93 -6.71 2020-10-15 20:42:30.585443974 INFO 2024-04-09 23:07:58,025Z lrauvNc4ToNetcdf.py nudge_coords():840 75: 0.380 0.0015788 0.0005194 9629 64.93 0.87 1.48 2020-10-15 21:47:26.585383892 INFO 2024-04-09 23:07:58,032Z lrauvNc4ToNetcdf.py nudge_coords():840 76: 0.370 0.0012075 -0.0004712 1176 8.60 -5.94 -10.15 2020-10-15 21:56:02.889877081 INFO 2024-04-09 23:07:58,037Z lrauvNc4ToNetcdf.py nudge_coords():840 77: 0.378 -0.0005453 -0.0001801 9779 65.84 -0.30 -0.51 2020-10-15 23:01:53.642360926 INFO 2024-04-09 23:07:58,044Z lrauvNc4ToNetcdf.py nudge_coords():840 78: 0.417 0.0007398 -0.0007620 1175 8.48 -9.71 -16.66 2020-10-15 23:10:22.576245070 INFO 2024-04-09 23:07:58,050Z lrauvNc4ToNetcdf.py nudge_coords():840 79: 0.381 -0.0003935 -0.0011577 9318 62.74 -2.00 -3.42 2020-10-16 00:13:07.246200085 INFO 2024-04-09 23:07:58,057Z lrauvNc4ToNetcdf.py nudge_coords():840 80: 0.376 0.0001395 -0.0002298 405 3.01 -8.26 -14.14 2020-10-16 00:16:08.380443096 INFO 2024-04-09 23:07:58,062Z lrauvNc4ToNetcdf.py nudge_coords():840 81: 0.372 -0.0015112 -0.0010401 9340 63.01 -1.77 -3.06 2020-10-16 01:19:09.086230040 INFO 2024-04-09 23:07:58,069Z lrauvNc4ToNetcdf.py nudge_coords():871 83: - - - 56 0.40 - - INFO 2024-04-09 23:07:58,069Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 306897 INFO 2024-04-09 23:07:58,099Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201014T133500/20201016T021933/data.csv INFO 2024-04-09 23:07:58,206Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:07:58,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:07:58,963Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:07:59,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201014T143500/202010141435_202010160119_2S_scieng.nc INFO 2024-04-09 23:07:59,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010141435_202010160119.nc4 INFO 2024-04-09 23:08:00,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T011933/202010160119_202010162221.nc4 file... INFO 2024-04-09 23:08:00,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010160119_202010162221.nc4 INFO 2024-04-09 23:08:01,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T011933/202010160119_202010162221.nc4 INFO 2024-04-09 23:08:01,449Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:01,629Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:01,811Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:01,990Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,153Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,311Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,458Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,604Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,747Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:02,893Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,037Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,180Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,346Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,509Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,677Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,841Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:03,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:03,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:03,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:04,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:04,020Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 56 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:04,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:04,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:04,106Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:04,115Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 64 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:04,133Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 14 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:04,159Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 13 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:04,175Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 37 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:04,245Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 73 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:04,391Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 56 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:04,456Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 56 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:04,517Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 10 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:04,541Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 10 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:04,563Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 10 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:04,588Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 10 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:04,638Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:04,783Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:04,851Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:04,917Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:04,971Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:04,981Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:05,047Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:05,111Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:05,169Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:05,218Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 50 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:05,268Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:05,284Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:05,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:05,332Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:05,501Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:05,668Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:05,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:05,866Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 138 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:06,045Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:06,106Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 138 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:06,282Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:06,343Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 138 v_t values found before 2020-10-16 01:19:00 and after 2020-10-16 22:21:00 INFO 2024-04-09 23:08:06,529Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:06,530Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T011933/202010160119_202010162221.nc4 INFO 2024-04-09 23:08:06,867Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 185936 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:06,982Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 40 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T011933/202010160119_202010162221.nc4 INFO 2024-04-09 23:08:06,982Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:06,984Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:06,987Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 -0.0045115 -0.0023104 9886 66.56 -3.76 -6.43 2020-10-16 02:34:03.482422113 INFO 2024-04-09 23:08:06,993Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 -0.0000627 -0.0001397 301 2.22 -6.83 -11.68 2020-10-16 02:36:16.824209929 INFO 2024-04-09 23:08:06,998Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.385 -0.0028846 -0.0027874 9730 65.51 -4.66 -7.88 2020-10-16 03:41:47.933387041 INFO 2024-04-09 23:08:07,005Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.363 0.0000300 -0.0000957 419 3.07 -3.41 -5.78 2020-10-16 03:44:52.477710009 INFO 2024-04-09 23:08:07,009Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.390 -0.0035734 -0.0036068 9933 66.88 -5.97 -9.99 2020-10-16 04:51:45.471113920 INFO 2024-04-09 23:08:07,016Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.384 -0.0000945 -0.0000733 398 2.93 -2.77 -4.64 2020-10-16 04:54:41.467263937 INFO 2024-04-09 23:08:07,021Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.393 -0.0028932 -0.0027840 9544 64.26 -4.85 -8.03 2020-10-16 05:58:57.418134928 INFO 2024-04-09 23:08:07,028Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.381 -0.0005222 0.0000872 1185 8.41 1.16 1.92 2020-10-16 06:07:22.222403049 INFO 2024-04-09 23:08:07,033Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.388 -0.0038352 -0.0003338 9427 63.47 -0.60 -0.97 2020-10-16 07:10:50.762554884 INFO 2024-04-09 23:08:07,040Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.382 0.0001795 0.0000933 347 2.56 4.14 6.75 2020-10-16 07:13:25.018428087 INFO 2024-04-09 23:08:07,045Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.384 -0.0034222 -0.0002314 10483 70.58 -0.38 -0.61 2020-10-16 08:24:00.214335918 INFO 2024-04-09 23:08:07,051Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.369 -0.0000227 -0.0000027 81 0.54 -0.57 -0.92 2020-10-16 08:24:32.959244967 INFO 2024-04-09 23:08:07,056Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.374 0.0020778 0.0007647 9897 66.63 1.32 2.13 2020-10-16 09:31:11.418581963 INFO 2024-04-09 23:08:07,063Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.367 0.0000080 0.0000562 81 0.54 11.98 19.29 2020-10-16 09:31:44.180735111 INFO 2024-04-09 23:08:07,067Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.385 0.0033449 0.0021246 10443 70.31 3.48 5.60 2020-10-16 10:42:03.333425999 INFO 2024-04-09 23:08:07,073Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.375 0.0000022 0.0000507 79 0.53 11.11 17.87 2020-10-16 10:42:35.257663965 INFO 2024-04-09 23:08:07,078Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.383 0.0029186 0.0017215 9613 64.72 3.07 4.93 2020-10-16 11:47:19.085230112 INFO 2024-04-09 23:08:07,084Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.377 0.0000627 0.0000970 169 1.22 9.18 14.74 2020-10-16 11:48:32.702702045 INFO 2024-04-09 23:08:07,089Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.384 0.0024270 0.0033724 10247 68.99 5.62 9.06 2020-10-16 12:57:32.782201052 INFO 2024-04-09 23:08:07,095Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.373 0.0000283 0.0000627 80 0.53 13.48 21.72 2020-10-16 12:58:05.249409914 INFO 2024-04-09 23:08:07,100Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.376 0.0013322 0.0018696 9979 67.19 3.20 5.16 2020-10-16 14:05:17.017373085 INFO 2024-04-09 23:08:07,107Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.377 0.0000133 0.0000355 78 0.52 7.88 12.69 2020-10-16 14:05:48.527327061 INFO 2024-04-09 23:08:07,112Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 0.0002023 0.0017575 9598 64.62 3.13 5.04 2020-10-16 15:10:26.278597116 INFO 2024-04-09 23:08:07,119Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.385 -0.0000405 0.0000423 165 1.22 4.00 6.43 2020-10-16 15:11:39.856168032 INFO 2024-04-09 23:08:07,123Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.380 -0.0009751 0.0011968 9634 64.86 2.14 3.42 2020-10-16 16:16:32.064498901 INFO 2024-04-09 23:08:07,130Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.374 -0.0002453 0.0001335 302 2.14 7.23 11.55 2020-10-16 16:18:40.937952042 INFO 2024-04-09 23:08:07,135Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.369 -0.0015957 0.0003155 9805 66.01 0.56 0.89 2020-10-16 17:24:42.293791056 INFO 2024-04-09 23:08:07,143Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.385 -0.0000653 0.0000710 139 0.96 8.71 13.71 2020-10-16 17:25:40.268363953 INFO 2024-04-09 23:08:07,147Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.381 -0.0028781 -0.0000291 9828 66.17 -0.05 -0.08 2020-10-16 18:31:50.897479057 INFO 2024-04-09 23:08:07,155Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.379 -0.0002503 0.0002615 919 6.73 4.61 7.19 2020-10-16 18:38:35.369745970 INFO 2024-04-09 23:08:07,159Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.368 -0.0029405 0.0006270 9887 66.57 1.12 1.75 2020-10-16 19:45:09.980837107 INFO 2024-04-09 23:08:07,166Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.371 -0.0000177 0.0000234 85 0.59 4.69 7.30 2020-10-16 19:45:46.031328916 INFO 2024-04-09 23:08:07,170Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.381 -0.0000835 0.0000368 297 2.11 2.08 3.23 2020-10-16 19:47:53.121577024 INFO 2024-04-09 23:08:07,175Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.371 -0.0012278 0.0013809 5619 37.83 4.29 6.76 2020-10-16 20:25:43.237879992 INFO 2024-04-09 23:08:07,181Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.390 0.0000377 0.0000187 93 0.62 3.54 5.57 2020-10-16 20:26:20.876164913 INFO 2024-04-09 23:08:07,185Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.391 0.0000795 0.0012869 5809 39.11 3.82 6.10 2020-10-16 21:05:27.904004097 INFO 2024-04-09 23:08:07,191Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.357 0.0000398 0.0000078 75 0.50 1.82 2.90 2020-10-16 21:05:58.306809902 INFO 2024-04-09 23:08:07,195Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.364 0.0001603 0.0026053 6135 41.30 7.25 11.69 2020-10-16 21:47:16.885875940 INFO 2024-04-09 23:08:07,201Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.376 0.0000587 0.0000455 60 0.40 13.16 21.21 2020-10-16 21:47:41.118463993 INFO 2024-04-09 23:08:07,205Z lrauvNc4ToNetcdf.py nudge_coords():871 40: - - - 5085 34.23 - - INFO 2024-04-09 23:08:07,206Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 185935 INFO 2024-04-09 23:08:07,235Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201016T001934/20201016T232156/data.csv INFO 2024-04-09 23:08:07,337Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:07,351Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:08,061Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:08,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T011933/202010160119_202010162221_2S_scieng.nc INFO 2024-04-09 23:08:08,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010160119_202010162221.nc4 INFO 2024-04-09 23:08:08,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T222156/202010162221_202010170013.nc4 file... INFO 2024-04-09 23:08:08,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010162221_202010170013.nc4 INFO 2024-04-09 23:08:09,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T222156/202010162221_202010170013.nc4 INFO 2024-04-09 23:08:09,203Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,277Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,346Z lrauvNc4ToNetcdf.py createSeries():299 depth : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,417Z lrauvNc4ToNetcdf.py createSeries():299 time : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,490Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,555Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,619Z lrauvNc4ToNetcdf.py createSeries():299 depth : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,686Z lrauvNc4ToNetcdf.py createSeries():299 time : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,750Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,815Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,879Z lrauvNc4ToNetcdf.py createSeries():299 depth : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:09,946Z lrauvNc4ToNetcdf.py createSeries():299 time : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,012Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,085Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,148Z lrauvNc4ToNetcdf.py createSeries():299 depth : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,216Z lrauvNc4ToNetcdf.py createSeries():299 time : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:10,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:10,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:10,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:10,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:10,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:10,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:10,307Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:10,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:10,321Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:10,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:10,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:10,349Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:10,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:10,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:10,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:10,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:10,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:10,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:10,392Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:10,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:10,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:10,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:10,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:10,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:10,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:10,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:10,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:10,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:10,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:10,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:10,500Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:10,523Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:10,546Z lrauvNc4ToNetcdf.py createSeries():299 depth : 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:10,596Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,653Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:10,685Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,752Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:10,784Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 38 v_t values found before 2020-10-16 22:21:00 and after 2020-10-17 00:13:00 INFO 2024-04-09 23:08:10,846Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:10,846Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T222156/202010162221_202010170013.nc4 INFO 2024-04-09 23:08:10,987Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 16505 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:11,088Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T222156/202010162221_202010170013.nc4 INFO 2024-04-09 23:08:11,089Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:11,090Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:11,090Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.384 0.0007737 -0.0000197 465 3.27 -0.69 -1.11 2020-10-16 22:25:13.809407949 INFO 2024-04-09 23:08:11,093Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0022563 0.0022170 5573 37.52 6.83 10.95 2020-10-16 23:02:45.385245085 INFO 2024-04-09 23:08:11,096Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.388 0.0000089 0.0000021 14 0.09 2.60 4.16 2020-10-16 23:02:51.457784891 INFO 2024-04-09 23:08:11,098Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.373 0.0001500 0.0000663 150 1.00 7.63 12.23 2020-10-16 23:03:52.162123919 INFO 2024-04-09 23:08:11,100Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.377 0.0015093 0.0009751 3839 25.84 4.38 6.99 2020-10-16 23:29:43.249615908 INFO 2024-04-09 23:08:11,103Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.377 0.0000937 0.0000202 77 0.51 4.58 7.30 2020-10-16 23:30:14.368736029 INFO 2024-04-09 23:08:11,106Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.359 0.0011067 0.0010787 3857 25.96 4.84 7.70 2020-10-16 23:56:12.632589102 INFO 2024-04-09 23:08:11,109Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.389 0.0000748 0.0000047 82 0.55 0.99 1.57 2020-10-16 23:56:46.109097004 INFO 2024-04-09 23:08:11,112Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.413 0.0008360 0.0001932 880 5.92 3.80 6.05 2020-10-17 00:02:41.650120020 INFO 2024-04-09 23:08:11,114Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.375 0.0008722 0.0001963 838 5.64 4.06 6.46 2020-10-17 00:08:20.213293076 INFO 2024-04-09 23:08:11,117Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 729 4.90 - - INFO 2024-04-09 23:08:11,117Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 16504 INFO 2024-04-09 23:08:11,147Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201016T212156/20201017T011315/data.csv INFO 2024-04-09 23:08:11,245Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:11,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:11,738Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:12,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201008_20201017/20201016T222156/202010162221_202010170013_2S_scieng.nc INFO 2024-04-09 23:08:12,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202010162221_202010170013.nc4 INFO 2024-04-09 23:08:13,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201110T185455/202011101854_202011112050.nc4 file... INFO 2024-04-09 23:08:13,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011101854_202011112050.nc4 INFO 2024-04-09 23:08:13,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201110T185455/202011101854_202011112050.nc4 INFO 2024-04-09 23:08:13,942Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:14,161Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:14,373Z lrauvNc4ToNetcdf.py createSeries():299 depth : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:14,585Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:14,782Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:14,950Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,116Z lrauvNc4ToNetcdf.py createSeries():299 depth : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,283Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,452Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,620Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,794Z lrauvNc4ToNetcdf.py createSeries():299 depth : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:15,981Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,167Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,349Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,537Z lrauvNc4ToNetcdf.py createSeries():299 depth : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,710Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:16,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:16,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:16,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:16,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:16,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:16,981Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:16,982Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:16,989Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:17,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:17,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:17,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:17,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:17,256Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:17,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:17,375Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:17,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:17,419Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:17,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:17,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:17,494Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:17,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:17,716Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:17,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:17,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:17,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:17,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:18,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:18,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:18,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:18,110Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:18,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:18,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:18,158Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:18,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:18,358Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:18,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:18,566Z lrauvNc4ToNetcdf.py createSeries():299 depth : 108 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:18,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:18,801Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 106 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:19,933Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:20,005Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 106 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:21,267Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:21,334Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 106 v_t values found before 2020-11-10 18:54:00 and after 2020-11-11 20:50:00 INFO 2024-04-09 23:08:22,472Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:22,473Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201110T185455/202011101854_202011112050.nc4 INFO 2024-04-09 23:08:22,863Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 230297 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:22,991Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 54 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201110T185455/202011101854_202011112050.nc4 INFO 2024-04-09 23:08:22,991Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:22,993Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:22,996Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 0.0016013 -0.0004282 306 2.08 -23.71 -38.23 2020-11-10 18:57:54.984385014 INFO 2024-04-09 23:08:23,001Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.378 0.0034938 0.0049205 9380 63.16 8.99 14.44 2020-11-10 20:01:04.876391888 INFO 2024-04-09 23:08:23,006Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.416 0.0000863 -0.0002363 440 3.33 -8.18 -13.14 2020-11-10 20:04:25.295192003 INFO 2024-04-09 23:08:23,011Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.386 0.0029323 0.0017847 9431 63.51 3.25 5.21 2020-11-10 21:07:56.192378044 INFO 2024-04-09 23:08:23,016Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.367 0.0001928 0.0001118 785 5.32 2.43 3.90 2020-11-10 21:13:15.803553104 INFO 2024-04-09 23:08:23,021Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.358 0.0002473 -0.0000372 877 5.90 -0.73 -1.17 2020-11-10 21:19:10.217720985 INFO 2024-04-09 23:08:23,025Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.372 -0.0000567 -0.0000118 819 5.51 -0.25 -0.40 2020-11-10 21:24:41.230350018 INFO 2024-04-09 23:08:23,029Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.374 0.0000250 -0.0000117 458 3.08 -0.44 -0.71 2020-11-10 21:27:46.328378916 INFO 2024-04-09 23:08:23,034Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.361 0.0000177 0.0000038 84 0.56 0.79 1.26 2020-11-10 21:28:20.401087999 INFO 2024-04-09 23:08:23,038Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.376 0.0016424 0.0006984 9115 61.41 1.28 2.11 2020-11-10 22:29:45.743693113 INFO 2024-04-09 23:08:23,044Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.413 0.0000558 0.0000097 540 3.88 0.28 0.46 2020-11-10 22:33:38.719655037 INFO 2024-04-09 23:08:23,049Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.374 0.0004282 -0.0000776 9779 65.84 -0.13 -0.22 2020-11-10 23:39:29.808383942 INFO 2024-04-09 23:08:23,054Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.389 0.0003651 0.0002951 1873 13.31 2.40 4.11 2020-11-10 23:52:48.718039989 INFO 2024-04-09 23:08:23,059Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.386 -0.0000756 -0.0001328 851 5.72 -2.51 -4.30 2020-11-10 23:58:32.644077063 INFO 2024-04-09 23:08:23,063Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.370 0.0000770 -0.0006338 9263 62.38 -1.06 -1.88 2020-11-11 01:00:55.713057041 INFO 2024-04-09 23:08:23,069Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.372 -0.0002169 0.0000179 415 3.08 0.61 1.08 2020-11-11 01:04:00.885597944 INFO 2024-04-09 23:08:23,073Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 -0.0001296 -0.0005443 10147 68.34 -0.79 -1.48 2020-11-11 02:12:21.736331940 INFO 2024-04-09 23:08:23,079Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.317 0.0000245 -0.0000623 139 1.02 -6.08 -11.33 2020-11-11 02:13:23.250936985 INFO 2024-04-09 23:08:23,083Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.397 -0.0010157 -0.0006867 9814 66.08 -0.99 -1.93 2020-11-11 03:19:28.383593082 INFO 2024-04-09 23:08:23,089Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 0.0001018 0.0000663 113 0.81 7.73 15.09 2020-11-11 03:20:17.651521921 INFO 2024-04-09 23:08:23,094Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.366 -0.0009439 0.0000682 10152 68.37 0.10 0.18 2020-11-11 04:28:40.415683031 INFO 2024-04-09 23:08:23,099Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.377 0.0000991 -0.0000543 430 3.04 -1.72 -3.31 2020-11-11 04:31:43.104852915 INFO 2024-04-09 23:08:23,104Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.399 -0.0010631 0.0004161 10082 67.88 0.61 1.14 2020-11-11 05:39:36.610922098 INFO 2024-04-09 23:08:23,110Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.369 -0.0000272 -0.0000241 313 2.33 -1.03 -1.91 2020-11-11 05:41:57.031683922 INFO 2024-04-09 23:08:23,115Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.380 -0.0011323 0.0002211 9867 66.45 0.34 0.62 2020-11-11 06:48:24.720304966 INFO 2024-04-09 23:08:23,121Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.356 -0.0009842 -0.0008298 338 2.68 -31.97 -57.43 2020-11-11 06:51:05.743866920 INFO 2024-04-09 23:08:23,126Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.361 0.0060705 -0.0025728 10093 67.96 -4.02 -7.02 2020-11-11 07:59:03.644618988 INFO 2024-04-09 23:08:23,132Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.374 -0.0000563 -0.0000868 297 2.14 -4.32 -7.53 2020-11-11 08:01:12.232460976 INFO 2024-04-09 23:08:23,137Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.373 0.0016656 -0.0029173 10212 68.76 -4.66 -7.86 2020-11-11 09:09:58.275393963 INFO 2024-04-09 23:08:23,143Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.346 -0.0000188 -0.0000220 263 2.00 -1.21 -2.04 2020-11-11 09:11:58.495486021 INFO 2024-04-09 23:08:23,148Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.368 -0.0001980 -0.0062476 10065 67.77 -10.51 -17.08 2020-11-11 10:19:45.128669024 INFO 2024-04-09 23:08:23,154Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.375 -0.0000882 0.0002973 396 2.93 11.59 18.83 2020-11-11 10:22:41.131294011 INFO 2024-04-09 23:08:23,159Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.378 -0.0013657 -0.0063869 10270 69.15 -10.91 -17.11 2020-11-11 11:31:50.610372066 INFO 2024-04-09 23:08:23,166Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.383 -0.0001037 0.0001685 272 2.08 9.56 14.99 2020-11-11 11:33:55.995805025 INFO 2024-04-09 23:08:23,171Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.387 -0.0019841 -0.0068306 9838 66.24 -12.59 -19.11 2020-11-11 12:40:11.076380014 INFO 2024-04-09 23:08:23,177Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.338 -0.0000270 0.0000195 151 1.13 2.11 3.20 2020-11-11 12:41:19.163302898 INFO 2024-04-09 23:08:23,182Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.369 0.0001967 0.0002814 10186 68.59 0.52 0.76 2020-11-11 13:49:54.721638918 INFO 2024-04-09 23:08:23,188Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.337 0.0000107 0.0000035 94 0.63 0.71 1.04 2020-11-11 13:50:33.009546995 INFO 2024-04-09 23:08:23,194Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.376 0.0003771 0.0005399 9363 63.05 1.11 1.59 2020-11-11 14:53:36.413427114 INFO 2024-04-09 23:08:23,200Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.341 0.0000121 0.0000096 207 1.51 0.82 1.18 2020-11-11 14:55:07.373529911 INFO 2024-04-09 23:08:23,205Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.315 0.0002637 -0.0003882 9710 65.38 -0.75 -1.10 2020-11-11 16:00:30.610022068 INFO 2024-04-09 23:08:23,211Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.366 0.0000153 -0.0000015 98 0.66 -0.29 -0.42 2020-11-11 16:01:10.616519928 INFO 2024-04-09 23:08:23,216Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.382 0.0000193 0.0000360 467 3.14 1.46 2.12 2020-11-11 16:04:19.517673968 INFO 2024-04-09 23:08:23,221Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.405 -0.0000030 -0.0000036 116 0.78 -0.59 -0.86 2020-11-11 16:05:06.895487070 INFO 2024-04-09 23:08:23,226Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.372 -0.0003438 -0.0000451 10284 69.25 -0.08 -0.12 2020-11-11 17:14:22.062588930 INFO 2024-04-09 23:08:23,232Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.359 -0.0000103 0.0000277 123 0.84 4.07 6.09 2020-11-11 17:15:13.117100954 INFO 2024-04-09 23:08:23,237Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.379 -0.0012155 0.0000236 10119 68.14 0.04 0.06 2020-11-11 18:23:21.753796101 INFO 2024-04-09 23:08:23,243Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.337 -0.0000355 0.0000283 82 0.55 6.26 9.58 2020-11-11 18:23:55.018215895 INFO 2024-04-09 23:08:23,249Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.381 -0.0003420 -0.0002178 10045 67.64 -0.38 -0.60 2020-11-11 19:31:33.797540903 INFO 2024-04-09 23:08:23,255Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.361 0.0000331 -0.0000111 234 1.67 -0.79 -1.24 2020-11-11 19:33:14.148802042 INFO 2024-04-09 23:08:23,261Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.380 -0.0014126 0.0030248 9490 63.90 5.46 8.77 2020-11-11 20:37:08.755310059 INFO 2024-04-09 23:08:23,267Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.374 0.0006472 0.0001758 849 5.75 3.53 5.67 2020-11-11 20:42:53.992404938 INFO 2024-04-09 23:08:23,272Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.397 0.0007383 0.0001478 840 5.65 3.02 4.85 2020-11-11 20:48:33.439323902 INFO 2024-04-09 23:08:23,277Z lrauvNc4ToNetcdf.py nudge_coords():871 54: - - - 321 2.16 - - INFO 2024-04-09 23:08:23,277Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 230296 INFO 2024-04-09 23:08:23,312Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201110T175455/20201111T215043/data.csv INFO 2024-04-09 23:08:23,413Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:23,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:24,230Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:24,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201110T185455/202011101854_202011112050_2S_scieng.nc INFO 2024-04-09 23:08:24,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011101854_202011112050.nc4 INFO 2024-04-09 23:08:25,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201111T205043/202011112050_202011121851.nc4 file... INFO 2024-04-09 23:08:25,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011112050_202011121851.nc4 INFO 2024-04-09 23:08:26,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201111T205043/202011112050_202011121851.nc4 INFO 2024-04-09 23:08:26,347Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:26,553Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:26,752Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:26,951Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,144Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,314Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,484Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,660Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,825Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:27,994Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:28,160Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:28,328Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:28,546Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:28,731Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:28,899Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:29,066Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:29,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:29,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:29,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:29,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:29,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:29,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:29,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:29,324Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:29,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:29,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:29,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:29,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:29,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:29,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:29,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:29,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:29,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:29,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:29,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:29,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:29,760Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 47 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:29,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:29,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:30,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:30,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:30,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:30,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:30,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:30,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:30,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:30,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:30,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:30,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:30,357Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:30,506Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:30,532Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:30,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:30,708Z lrauvNc4ToNetcdf.py createSeries():299 depth : 46 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:30,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:30,920Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 45 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:31,095Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:31,158Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 45 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:31,322Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:31,384Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 45 v_t values found before 2020-11-11 20:50:00 and after 2020-11-12 18:51:00 INFO 2024-04-09 23:08:31,555Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:31,556Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201111T205043/202011112050_202011121851.nc4 INFO 2024-04-09 23:08:31,922Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 194804 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:32,049Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 61 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201111T205043/202011112050_202011121851.nc4 INFO 2024-04-09 23:08:32,050Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:32,052Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:32,054Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 0.0006548 0.0001155 751 5.06 2.64 4.23 2020-11-11 20:59:20.791723967 INFO 2024-04-09 23:08:32,058Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.392 0.0001843 0.0000697 198 1.33 6.05 9.72 2020-11-11 21:00:40.904052019 INFO 2024-04-09 23:08:32,062Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.391 0.0010746 0.0008134 489 3.29 28.52 45.81 2020-11-11 21:03:58.755451918 INFO 2024-04-09 23:08:32,066Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.379 0.0005495 -0.0000281 828 5.57 -0.58 -0.93 2020-11-11 21:09:33.475543976 INFO 2024-04-09 23:08:32,070Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.341 0.0014349 0.0000820 608 4.09 2.31 3.72 2020-11-11 21:13:39.229299068 INFO 2024-04-09 23:08:32,074Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.402 0.0000674 0.0000292 142 0.95 3.54 5.68 2020-11-11 21:14:36.670305014 INFO 2024-04-09 23:08:32,077Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.384 0.0058239 0.0041790 10809 72.79 6.56 10.64 2020-11-11 22:27:24.512396097 INFO 2024-04-09 23:08:32,081Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.335 0.0000907 0.0000070 85 0.57 1.41 2.29 2020-11-11 22:27:58.950700045 INFO 2024-04-09 23:08:32,086Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.374 0.0133439 0.0045234 10304 69.39 7.35 12.08 2020-11-11 23:37:22.997438908 INFO 2024-04-09 23:08:32,090Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.375 0.0009687 -0.0000652 1186 8.50 -0.87 -1.42 2020-11-11 23:45:53.127374886 INFO 2024-04-09 23:08:32,095Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.374 0.0068086 -0.0033018 10287 69.27 -5.27 -8.83 2020-11-12 00:55:09.552637100 INFO 2024-04-09 23:08:32,100Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.371 -0.0001705 -0.0001658 567 3.97 -4.62 -7.74 2020-11-12 00:59:08.081516981 INFO 2024-04-09 23:08:32,104Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.361 0.0014535 -0.0003685 10672 71.86 -0.56 -0.95 2020-11-12 02:11:00.272211075 INFO 2024-04-09 23:08:32,109Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.363 -0.0014803 -0.0001253 2253 15.73 -0.87 -1.48 2020-11-12 02:26:44.212429047 INFO 2024-04-09 23:08:32,113Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.400 0.0017523 0.0026977 10735 72.28 4.05 6.92 2020-11-12 03:39:01.584495068 INFO 2024-04-09 23:08:32,118Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.371 -0.0017965 0.0000727 2789 19.78 0.40 0.68 2020-11-12 03:58:48.911828041 INFO 2024-04-09 23:08:32,123Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 0.0008575 0.0009179 9974 67.16 1.52 2.53 2020-11-12 05:05:58.808327913 INFO 2024-04-09 23:08:32,128Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.338 0.0001451 0.0000954 680 4.98 2.13 3.55 2020-11-12 05:10:57.978909969 INFO 2024-04-09 23:08:32,133Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.372 -0.0039386 -0.0012024 10905 73.43 -1.90 -3.03 2020-11-12 06:24:24.074448109 INFO 2024-04-09 23:08:32,138Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 -0.0008636 0.0016326 1513 10.65 17.84 28.42 2020-11-12 06:35:03.197442055 INFO 2024-04-09 23:08:32,142Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.383 -0.0004742 0.0013365 10485 70.60 2.28 3.51 2020-11-12 07:45:39.665652990 INFO 2024-04-09 23:08:32,147Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.362 0.0002639 0.0000576 4408 30.02 0.23 0.36 2020-11-12 08:15:41.451926947 INFO 2024-04-09 23:08:32,151Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.371 0.0002777 0.0011094 9867 66.44 2.08 3.09 2020-11-12 09:22:08.226650 INFO 2024-04-09 23:08:32,156Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.380 -0.0000366 -0.0000143 154 1.04 -1.71 -2.55 2020-11-12 09:23:10.849580050 INFO 2024-04-09 23:08:32,160Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.359 0.0002092 0.0009743 9745 65.62 1.90 2.75 2020-11-12 10:28:48.547821045 INFO 2024-04-09 23:08:32,165Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.387 0.0000071 0.0000018 85 0.57 0.40 0.57 2020-11-12 10:29:22.945759058 INFO 2024-04-09 23:08:32,169Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.375 0.0000790 -0.0000277 750 5.05 -0.70 -1.02 2020-11-12 10:34:26.283549070 INFO 2024-04-09 23:08:32,173Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.334 0.0000009 0.0000191 124 0.83 2.94 4.25 2020-11-12 10:35:16.648942947 INFO 2024-04-09 23:08:32,177Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.352 0.0000480 0.0000107 762 5.13 0.27 0.39 2020-11-12 10:40:24.582041025 INFO 2024-04-09 23:08:32,181Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.283 0.0000023 0.0000088 106 0.72 1.58 2.28 2020-11-12 10:41:07.857053041 INFO 2024-04-09 23:08:32,186Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.370 0.0000740 -0.0000010 762 5.13 -0.03 -0.04 2020-11-12 10:46:15.691464901 INFO 2024-04-09 23:08:32,190Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.363 0.0005575 -0.0000655 10033 67.56 -0.12 -0.18 2020-11-12 11:53:49.771568060 INFO 2024-04-09 23:08:32,195Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.366 0.0000329 0.0000050 195 1.31 0.48 0.70 2020-11-12 11:55:08.997821093 INFO 2024-04-09 23:08:32,199Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.325 0.0000380 0.0000071 759 5.11 0.18 0.26 2020-11-12 12:00:15.736557961 INFO 2024-04-09 23:08:32,204Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.375 0.0000224 0.0000140 267 1.79 1.00 1.45 2020-11-12 12:02:03.578695059 INFO 2024-04-09 23:08:32,208Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.374 0.0000554 -0.0000451 9874 66.49 -0.08 -0.13 2020-11-12 13:08:33.334554911 INFO 2024-04-09 23:08:32,213Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.434 0.0000302 -0.0000095 417 2.95 -0.40 -0.60 2020-11-12 13:11:30.447562933 INFO 2024-04-09 23:08:32,217Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.375 0.0002090 0.0003347 10125 68.18 0.60 0.91 2020-11-12 14:19:41.540326118 INFO 2024-04-09 23:08:32,222Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.379 -0.0000169 -0.0000019 82 0.55 -0.42 -0.64 2020-11-12 14:20:14.715293884 INFO 2024-04-09 23:08:32,227Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.362 0.0002998 0.0003819 10396 70.00 0.66 1.01 2020-11-12 15:30:15.155637026 INFO 2024-04-09 23:08:32,232Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.376 -0.0004672 0.0001539 1450 9.88 1.88 2.89 2020-11-12 15:40:08.090262890 INFO 2024-04-09 23:08:32,236Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.349 -0.0004869 -0.0002163 3963 27.16 -0.96 -1.48 2020-11-12 16:07:18.380532026 INFO 2024-04-09 23:08:32,240Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.326 -0.0001809 -0.0000308 760 5.12 -0.73 -1.12 2020-11-12 16:12:25.673892975 INFO 2024-04-09 23:08:32,245Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.343 0.0006924 0.0000778 161 1.09 8.66 13.28 2020-11-12 16:13:31.141086102 INFO 2024-04-09 23:08:32,249Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.320 0.0001292 -0.0000200 772 5.20 -0.46 -0.71 2020-11-12 16:18:43.554004908 INFO 2024-04-09 23:08:32,253Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.312 -0.0000286 0.0000113 84 0.58 2.35 3.61 2020-11-12 16:19:18.792181969 INFO 2024-04-09 23:08:32,257Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.374 0.0000223 -0.0000168 631 4.24 -0.48 -0.73 2020-11-12 16:23:33.818628073 INFO 2024-04-09 23:08:32,261Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.415 0.0000623 -0.0000253 146 0.98 -3.12 -4.78 2020-11-12 16:24:32.945724964 INFO 2024-04-09 23:08:32,265Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.384 -0.0003691 -0.0002706 10635 71.67 -0.44 -0.70 2020-11-12 17:36:13.633824110 INFO 2024-04-09 23:08:32,270Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.374 0.0000134 -0.0000129 129 1.03 -1.47 -2.32 2020-11-12 17:37:15.714337111 INFO 2024-04-09 23:08:32,275Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.375 -0.0005431 -0.0000167 1316 9.23 -0.21 -0.34 2020-11-12 17:46:29.799547911 INFO 2024-04-09 23:08:32,279Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.384 0.0000968 -0.0000627 978 6.58 -1.12 -1.77 2020-11-12 17:53:04.944052935 INFO 2024-04-09 23:08:32,283Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.383 -0.0002475 -0.0000256 1324 9.14 -0.33 -0.52 2020-11-12 18:02:13.475163937 INFO 2024-04-09 23:08:32,287Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.389 -0.0000497 0.0000267 838 5.64 0.56 0.88 2020-11-12 18:07:52.234159946 INFO 2024-04-09 23:08:32,292Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.391 0.0000713 -0.0000344 819 5.51 -0.73 -1.16 2020-11-12 18:13:23.454286098 INFO 2024-04-09 23:08:32,296Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.359 -0.0000164 -0.0000257 540 3.63 -0.83 -1.31 2020-11-12 18:17:01.898931026 INFO 2024-04-09 23:08:32,300Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.354 -0.0001052 0.0000414 126 0.84 5.76 9.11 2020-11-12 18:17:52.801845074 INFO 2024-04-09 23:08:32,305Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.378 -0.0001836 -0.0004070 3862 26.00 -1.83 -2.90 2020-11-12 18:43:53.332307100 INFO 2024-04-09 23:08:32,309Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.383 0.0001151 -0.0002581 93 0.62 -48.45 -76.95 2020-11-12 18:44:31.039589882 INFO 2024-04-09 23:08:32,314Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.391 -0.0002760 -0.0007211 748 5.04 -16.68 -26.51 2020-11-12 18:49:33.930538893 INFO 2024-04-09 23:08:32,318Z lrauvNc4ToNetcdf.py nudge_coords():871 61: - - - 257 1.73 - - INFO 2024-04-09 23:08:32,318Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 194803 INFO 2024-04-09 23:08:32,349Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201111T195044/20201112T195118/data.csv INFO 2024-04-09 23:08:32,450Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:32,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:33,261Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:33,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201110_20201112/20201111T205043/202011112050_202011121851_2S_scieng.nc INFO 2024-04-09 23:08:33,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011112050_202011121851.nc4 INFO 2024-04-09 23:08:34,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T191125/202012011911_202012012309.nc4 file... INFO 2024-04-09 23:08:34,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012011911_202012012309.nc4 INFO 2024-04-09 23:08:34,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T191125/202012011911_202012012309.nc4 INFO 2024-04-09 23:08:34,910Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:34,997Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,074Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,150Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,229Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,299Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,371Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,443Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,516Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,587Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,660Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,735Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,816Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,900Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:35,977Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,063Z lrauvNc4ToNetcdf.py createSeries():299 time : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:36,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:36,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:36,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:36,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:36,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:36,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:36,176Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:36,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:36,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:36,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:36,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:36,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:36,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:36,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:36,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:36,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:36,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:36,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:36,296Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:36,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:36,358Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:36,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:36,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:36,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:36,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:36,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:36,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:36,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:36,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:36,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:36,457Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:36,496Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:36,536Z lrauvNc4ToNetcdf.py createSeries():299 depth : 142 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:36,605Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 140 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,668Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:36,706Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 140 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,775Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:36,811Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 140 v_t values found before 2020-12-01 19:11:00 and after 2020-12-01 23:09:00 INFO 2024-04-09 23:08:36,885Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:36,885Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T191125/202012011911_202012012309.nc4 INFO 2024-04-09 23:08:37,072Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 34323 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:37,179Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 15 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T191125/202012011911_202012012309.nc4 INFO 2024-04-09 23:08:37,179Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:37,180Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:37,181Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 0.0000307 -0.0001052 113 0.76 -15.90 -25.76 2020-12-01 19:18:52.096071005 INFO 2024-04-09 23:08:37,183Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.357 0.0000102 -0.0000532 78 0.52 -11.72 -18.99 2020-12-01 19:19:23.638812065 INFO 2024-04-09 23:08:37,186Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.355 0.0008289 0.0008966 6403 43.11 2.37 3.85 2020-12-01 20:02:30.872549057 INFO 2024-04-09 23:08:37,188Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.400 0.0000497 -0.0003532 310 2.17 -18.60 -30.20 2020-12-01 20:04:41.273034096 INFO 2024-04-09 23:08:37,191Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.388 0.0003643 -0.0033856 9554 64.44 -5.98 -9.74 2020-12-01 21:09:07.969017029 INFO 2024-04-09 23:08:37,194Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.380 0.0000137 -0.0009883 807 5.86 -19.18 -31.27 2020-12-01 21:14:59.776283026 INFO 2024-04-09 23:08:37,197Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.374 -0.0007236 -0.0010255 3842 25.87 -4.56 -7.35 2020-12-01 21:40:52.149256945 INFO 2024-04-09 23:08:37,199Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.389 -0.0000445 -0.0012653 1071 7.23 -20.10 -32.41 2020-12-01 21:48:06.628082037 INFO 2024-04-09 23:08:37,202Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.382 0.0008515 -0.0010410 416 2.80 -42.68 -68.86 2020-12-01 21:50:55.112322092 INFO 2024-04-09 23:08:37,205Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.389 -0.0000667 -0.0002445 262 1.77 -15.90 -25.66 2020-12-01 21:52:41.436233044 INFO 2024-04-09 23:08:37,208Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.372 0.0020706 0.0002842 10299 69.37 0.46 0.76 2020-12-01 23:02:03.801700115 INFO 2024-04-09 23:08:37,211Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.373 0.0001305 -0.0000393 188 1.26 -3.47 -5.76 2020-12-01 23:03:20.033088923 INFO 2024-04-09 23:08:37,214Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.336 -0.0000191 -0.0000493 113 0.75 -7.30 -12.12 2020-12-01 23:04:05.734776974 INFO 2024-04-09 23:08:37,216Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.381 0.0009176 0.0001258 601 4.06 3.46 5.75 2020-12-01 23:08:09.444233894 INFO 2024-04-09 23:08:37,219Z lrauvNc4ToNetcdf.py nudge_coords():871 15: - - - 265 1.78 - - INFO 2024-04-09 23:08:37,219Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 34322 INFO 2024-04-09 23:08:37,249Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201201T181125/20201202T000957/data.csv INFO 2024-04-09 23:08:37,351Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:37,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:38,066Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:38,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T191125/202012011911_202012012309_2S_scieng.nc INFO 2024-04-09 23:08:38,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012011911_202012012309.nc4 INFO 2024-04-09 23:08:41,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T230959/202012012310_202012032102.nc4 file... INFO 2024-04-09 23:08:41,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012012310_202012032102.nc4 INFO 2024-04-09 23:08:42,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T230959/202012012310_202012032102.nc4 INFO 2024-04-09 23:08:42,337Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:42,646Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:42,936Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:43,230Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:43,502Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:43,746Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:43,978Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:44,211Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:44,436Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:44,665Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:44,895Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:45,122Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:45,353Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:45,582Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:45,807Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,036Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:08:46,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:08:46,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:08:46,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:08:46,335Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 25 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:08:46,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:08:46,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:08:46,444Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:08:46,455Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 1 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:08:46,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:08:46,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:08:46,535Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 11 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:08:46,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:08:46,875Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 26 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:46,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:08:46,977Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 26 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:08:47,060Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 4 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:08:47,094Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 4 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:08:47,127Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 4 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:08:47,159Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 4 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:08:47,242Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:08:47,522Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:08:47,630Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:08:47,723Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:08:47,817Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:08:47,912Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:47,989Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:08:48,009Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:08:48,087Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:08:48,151Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 22 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:08:48,216Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:48,234Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:08:48,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:48,305Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:48,633Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:48,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:48,952Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:49,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:08:49,307Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 63 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:49,559Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:49,647Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 63 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:49,903Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:49,989Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 63 v_t values found before 2020-12-01 23:10:00 and after 2020-12-03 21:02:00 INFO 2024-04-09 23:08:50,243Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:08:50,245Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T230959/202012012310_202012032102.nc4 INFO 2024-04-09 23:08:50,742Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 407040 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:08:50,841Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 134 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T230959/202012012310_202012032102.nc4 INFO 2024-04-09 23:08:50,841Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:08:50,843Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:08:50,846Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.315 0.0000357 -0.0000668 133 0.89 -8.37 -13.91 2020-12-01 23:15:48.543550014 INFO 2024-04-09 23:08:50,850Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.394 -0.0001416 -0.0003842 1297 8.76 -4.88 -8.13 2020-12-01 23:24:34.269356966 INFO 2024-04-09 23:08:50,855Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.378 0.0008525 -0.0013772 9574 64.48 -2.30 -3.96 2020-12-02 00:29:03.369255066 INFO 2024-04-09 23:08:50,861Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.331 -0.0005491 -0.0030702 2245 15.48 -21.28 -36.74 2020-12-02 00:44:32.864666939 INFO 2024-04-09 23:08:50,866Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.304 0.0002448 -0.0010503 10131 68.23 -1.59 -2.85 2020-12-02 01:52:46.731956005 INFO 2024-04-09 23:08:50,872Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.373 -0.0002890 0.0000029 689 4.65 0.07 0.12 2020-12-02 01:57:25.827253103 INFO 2024-04-09 23:08:50,877Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.373 0.0009596 -0.0015803 10026 67.51 -2.31 -4.34 2020-12-02 03:04:56.746115923 INFO 2024-04-09 23:08:50,882Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.361 0.0000295 -0.0000328 82 0.55 -5.90 -11.10 2020-12-02 03:05:30.026242971 INFO 2024-04-09 23:08:50,887Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.422 0.0003198 -0.0019510 10108 68.06 -2.69 -5.31 2020-12-02 04:13:34.136940956 INFO 2024-04-09 23:08:50,893Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.345 0.0000685 -0.0001439 84 0.56 -24.12 -47.62 2020-12-02 04:14:08.199173927 INFO 2024-04-09 23:08:50,898Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.382 0.0004875 -0.0004353 749 5.04 -8.10 -16.00 2020-12-02 04:19:11.045492887 INFO 2024-04-09 23:08:50,903Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.372 0.0002267 -0.0000948 300 2.02 -4.41 -8.72 2020-12-02 04:21:12.431337118 INFO 2024-04-09 23:08:50,908Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.401 -0.0017931 -0.0004988 10476 70.54 -0.68 -1.31 2020-12-02 05:31:45.212189913 INFO 2024-04-09 23:08:50,913Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.391 -0.0000644 0.0000373 87 0.58 6.22 11.94 2020-12-02 05:32:20.428523064 INFO 2024-04-09 23:08:50,918Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.366 -0.0013611 -0.0003380 11013 74.18 -0.45 -0.84 2020-12-02 06:46:31.654021025 INFO 2024-04-09 23:08:50,924Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.374 -0.0000373 -0.0000070 100 0.68 -1.03 -1.92 2020-12-02 06:47:12.881201029 INFO 2024-04-09 23:08:50,929Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.367 -0.0010202 0.0000877 11053 74.44 0.12 0.22 2020-12-02 08:01:39.435585976 INFO 2024-04-09 23:08:50,934Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.352 -0.0000765 0.0000537 281 1.90 2.90 5.24 2020-12-02 08:03:33.648576975 INFO 2024-04-09 23:08:50,939Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.368 0.0000943 -0.0001228 846 5.69 -2.22 -4.00 2020-12-02 08:09:15.668569088 INFO 2024-04-09 23:08:50,944Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.353 0.0000482 -0.0000175 82 0.55 -3.26 -5.89 2020-12-02 08:09:49.069915056 INFO 2024-04-09 23:08:50,949Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.365 -0.0003338 -0.0073137 10847 73.06 -10.54 -18.55 2020-12-02 09:22:52.950330019 INFO 2024-04-09 23:08:50,955Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.366 -0.0001203 0.0000272 92 0.61 4.66 8.20 2020-12-02 09:23:30.178854942 INFO 2024-04-09 23:08:50,960Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.364 -0.0037139 -0.0031503 10799 72.72 -4.72 -8.03 2020-12-02 10:36:13.702837944 INFO 2024-04-09 23:08:50,966Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.408 -0.0014214 0.0002235 655 4.42 5.52 9.37 2020-12-02 10:40:39.173149109 INFO 2024-04-09 23:08:50,971Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.371 -0.0005625 0.0000670 756 5.10 1.43 2.44 2020-12-02 10:45:45.547981977 INFO 2024-04-09 23:08:50,976Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.371 -0.0001893 0.0000674 472 3.17 2.32 3.94 2020-12-02 10:48:56.268260956 INFO 2024-04-09 23:08:50,981Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.362 -0.0003327 0.0001216 751 5.06 2.62 4.46 2020-12-02 10:54:00.041790962 INFO 2024-04-09 23:08:50,986Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.329 -0.0057146 0.0075706 10770 72.52 11.09 19.34 2020-12-02 12:06:31.692565918 INFO 2024-04-09 23:08:50,991Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.325 -0.0002335 0.0005318 446 3.01 18.78 32.75 2020-12-02 12:09:32.614413977 INFO 2024-04-09 23:08:50,997Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.364 -0.0008489 0.0002084 757 5.10 4.35 7.58 2020-12-02 12:14:38.739886999 INFO 2024-04-09 23:08:51,002Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.379 -0.0000722 0.0000465 93 0.62 7.92 13.82 2020-12-02 12:15:16.533425092 INFO 2024-04-09 23:08:51,006Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.375 -0.0009452 0.0001674 765 5.15 3.46 6.03 2020-12-02 12:20:25.777882099 INFO 2024-04-09 23:08:51,012Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.356 -0.0006552 0.0002413 698 4.71 5.45 9.50 2020-12-02 12:25:08.562983990 INFO 2024-04-09 23:08:51,017Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.374 -0.0017339 -0.0000933 752 5.06 -1.96 -3.42 2020-12-02 12:30:12.373233080 INFO 2024-04-09 23:08:51,022Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.343 -0.0000855 0.0000013 119 0.80 0.18 0.31 2020-12-02 12:31:00.702480078 INFO 2024-04-09 23:08:51,027Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.360 -0.0005673 0.0000691 762 5.13 1.43 2.50 2020-12-02 12:36:08.778537989 INFO 2024-04-09 23:08:51,032Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.366 0.0001936 0.0001743 408 2.75 6.74 11.74 2020-12-02 12:38:54.210428953 INFO 2024-04-09 23:08:51,036Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.424 -0.0009929 0.0001275 839 5.65 2.40 4.19 2020-12-02 12:44:33.350373983 INFO 2024-04-09 23:08:51,041Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.390 -0.0008310 0.0001353 818 5.51 2.61 4.55 2020-12-02 12:50:04.221842051 INFO 2024-04-09 23:08:51,046Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.334 -0.0055433 0.0064724 10372 69.85 9.58 17.17 2020-12-02 13:59:55.564300060 INFO 2024-04-09 23:08:51,051Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.365 0.0002771 -0.0002552 1035 7.00 -3.77 -6.75 2020-12-02 14:06:55.985491037 INFO 2024-04-09 23:08:51,056Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.396 0.0011626 0.0004550 10621 71.52 0.64 1.18 2020-12-02 15:18:27.481374979 INFO 2024-04-09 23:08:51,062Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.409 -0.0000120 0.0000001 100 0.67 0.02 0.04 2020-12-02 15:19:08.397345066 INFO 2024-04-09 23:08:51,066Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.373 0.0008827 -0.0000805 10798 72.71 -0.11 -0.21 2020-12-02 16:31:51.354640961 INFO 2024-04-09 23:08:51,072Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.362 -0.0000318 0.0000740 214 1.44 4.98 9.52 2020-12-02 16:33:18.108336926 INFO 2024-04-09 23:08:51,076Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.376 -0.0011154 0.0001919 2784 18.76 0.99 1.90 2020-12-02 16:52:03.829196930 INFO 2024-04-09 23:08:51,081Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.390 0.0003773 -0.0003169 9784 65.91 -0.45 -0.89 2020-12-02 17:57:58.585098028 INFO 2024-04-09 23:08:51,086Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.262 0.0000317 0.0000022 102 0.68 0.30 0.60 2020-12-02 17:58:40.102591991 INFO 2024-04-09 23:08:51,091Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.363 -0.0006095 -0.0001599 637 4.29 -3.50 -6.91 2020-12-02 18:02:57.784183979 INFO 2024-04-09 23:08:51,096Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.391 0.0003733 -0.0000401 1045 7.03 -0.54 -1.06 2020-12-02 18:10:00.088288069 INFO 2024-04-09 23:08:51,101Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.374 0.0000896 0.0000672 138 0.93 6.81 13.44 2020-12-02 18:10:56.121189117 INFO 2024-04-09 23:08:51,105Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.379 0.0000198 0.0000260 387 2.60 0.94 1.85 2020-12-02 18:13:32.502233028 INFO 2024-04-09 23:08:51,110Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.371 -0.0011735 -0.0003169 10136 68.26 -0.45 -0.86 2020-12-02 19:21:48.464293003 INFO 2024-04-09 23:08:51,116Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.354 -0.0000117 -0.0000238 245 1.65 -1.40 -2.67 2020-12-02 19:23:27.827795982 INFO 2024-04-09 23:08:51,120Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.374 -0.0000893 -0.0000283 750 5.05 -0.54 -1.04 2020-12-02 19:28:31.455946922 INFO 2024-04-09 23:08:51,125Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.392 0.0000183 -0.0000147 95 0.65 -2.19 -4.19 2020-12-02 19:29:10.912434101 INFO 2024-04-09 23:08:51,130Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.363 0.0000465 0.0000274 751 5.05 0.53 1.00 2020-12-02 19:34:14.486440897 INFO 2024-04-09 23:08:51,134Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.410 -0.0000709 -0.0000124 362 2.44 -0.49 -0.94 2020-12-02 19:36:41.088566065 INFO 2024-04-09 23:08:51,139Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.374 -0.0004011 0.0001201 1015 6.84 1.70 3.26 2020-12-02 19:43:31.775518894 INFO 2024-04-09 23:08:51,144Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.396 0.0000861 -0.0000301 430 2.90 -1.01 -1.92 2020-12-02 19:46:25.908246994 INFO 2024-04-09 23:08:51,149Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.389 -0.0002743 -0.0000838 769 5.19 -1.57 -2.99 2020-12-02 19:51:37.760346889 INFO 2024-04-09 23:08:51,153Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.283 -0.0000555 0.0000238 84 0.56 4.11 7.85 2020-12-02 19:52:11.935266972 INFO 2024-04-09 23:08:51,158Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.379 -0.0001010 0.0000510 761 5.12 0.97 1.85 2020-12-02 19:57:19.704073906 INFO 2024-04-09 23:08:51,163Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.385 -0.0010982 0.0000894 10216 68.79 0.13 0.24 2020-12-02 21:06:07.729101896 INFO 2024-04-09 23:08:51,168Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.372 -0.0000373 -0.0000535 462 3.11 -1.72 -3.19 2020-12-02 21:09:14.889307022 INFO 2024-04-09 23:08:51,173Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.311 0.0000396 0.0000059 769 5.17 0.11 0.21 2020-12-02 21:14:25.725714922 INFO 2024-04-09 23:08:51,178Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.375 0.0000228 -0.0000438 94 0.63 -7.00 -12.95 2020-12-02 21:15:03.685349941 INFO 2024-04-09 23:08:51,183Z lrauvNc4ToNetcdf.py nudge_coords():840 67: 0.305 0.0000539 -0.0000042 546 3.68 -0.12 -0.21 2020-12-02 21:18:44.598778009 INFO 2024-04-09 23:08:51,188Z lrauvNc4ToNetcdf.py nudge_coords():840 68: 0.371 0.0000030 -0.0000393 369 2.48 -1.58 -2.93 2020-12-02 21:21:14.053375959 INFO 2024-04-09 23:08:51,194Z lrauvNc4ToNetcdf.py nudge_coords():840 69: 0.355 -0.0000193 -0.0010899 11187 75.33 -1.50 -2.68 2020-12-02 22:36:34.277164936 INFO 2024-04-09 23:08:51,199Z lrauvNc4ToNetcdf.py nudge_coords():840 70: 0.310 0.0004772 0.0000117 459 3.10 0.39 0.70 2020-12-02 22:39:40.713087082 INFO 2024-04-09 23:08:51,204Z lrauvNc4ToNetcdf.py nudge_coords():840 71: 0.362 0.0012844 0.0000811 1506 10.15 0.83 1.48 2020-12-02 22:49:50.291001081 INFO 2024-04-09 23:08:51,209Z lrauvNc4ToNetcdf.py nudge_coords():840 72: 0.386 0.0024694 -0.0028339 10896 73.37 -4.09 -7.16 2020-12-03 00:03:12.754904985 INFO 2024-04-09 23:08:51,215Z lrauvNc4ToNetcdf.py nudge_coords():840 73: 0.361 0.0020415 -0.0026722 4380 30.04 -9.38 -16.49 2020-12-03 00:33:15.337426901 INFO 2024-04-09 23:08:51,221Z lrauvNc4ToNetcdf.py nudge_coords():840 74: 0.389 -0.0016147 -0.0043841 11007 74.12 -6.39 -10.96 2020-12-03 01:47:22.813019037 INFO 2024-04-09 23:08:51,226Z lrauvNc4ToNetcdf.py nudge_coords():840 75: 0.378 -0.0017399 -0.0044412 4399 30.02 -15.88 -27.41 2020-12-03 02:17:24.722129107 INFO 2024-04-09 23:08:51,232Z lrauvNc4ToNetcdf.py nudge_coords():840 76: 0.336 -0.0021394 -0.0038745 10428 70.22 -6.13 -10.22 2020-12-03 03:27:38.164040089 INFO 2024-04-09 23:08:51,237Z lrauvNc4ToNetcdf.py nudge_coords():840 77: 0.297 0.0014297 -0.0027332 4323 30.14 -10.03 -16.80 2020-12-03 03:57:46.940366030 INFO 2024-04-09 23:08:51,242Z lrauvNc4ToNetcdf.py nudge_coords():840 78: 0.412 0.0036073 -0.0043420 10522 70.85 -7.01 -11.36 2020-12-03 05:08:38.141604900 INFO 2024-04-09 23:08:51,248Z lrauvNc4ToNetcdf.py nudge_coords():840 79: 0.353 -0.0046870 -0.0017515 4344 30.06 -6.65 -10.80 2020-12-03 05:38:41.911667109 INFO 2024-04-09 23:08:51,253Z lrauvNc4ToNetcdf.py nudge_coords():840 80: 0.334 0.0001797 -0.0013124 10919 73.52 -2.11 -3.31 2020-12-03 06:52:13.745359898 INFO 2024-04-09 23:08:51,259Z lrauvNc4ToNetcdf.py nudge_coords():840 81: 0.364 -0.0002260 0.0000061 4394 30.08 0.02 0.04 2020-12-03 07:22:19.080950022 INFO 2024-04-09 23:08:51,264Z lrauvNc4ToNetcdf.py nudge_coords():840 82: 0.383 -0.0011370 -0.0001839 9978 67.19 -0.33 -0.51 2020-12-03 08:29:30.587346077 INFO 2024-04-09 23:08:51,269Z lrauvNc4ToNetcdf.py nudge_coords():840 83: 0.274 -0.0002938 0.0001360 780 5.31 3.13 4.75 2020-12-03 08:34:49.558655977 INFO 2024-04-09 23:08:51,274Z lrauvNc4ToNetcdf.py nudge_coords():840 84: 0.367 -0.0000120 0.0022342 10723 72.20 3.89 5.73 2020-12-03 09:47:02.085802078 INFO 2024-04-09 23:08:51,280Z lrauvNc4ToNetcdf.py nudge_coords():840 85: 0.325 -0.0000653 -0.0001370 611 4.12 -4.18 -6.16 2020-12-03 09:51:09.577357054 INFO 2024-04-09 23:08:51,285Z lrauvNc4ToNetcdf.py nudge_coords():840 86: 0.361 0.0001256 0.0000862 782 5.26 2.06 3.04 2020-12-03 09:56:25.633727074 INFO 2024-04-09 23:08:51,290Z lrauvNc4ToNetcdf.py nudge_coords():840 87: 0.339 0.0002920 0.0000150 1530 10.31 0.18 0.27 2020-12-03 10:06:44.363457918 INFO 2024-04-09 23:08:51,295Z lrauvNc4ToNetcdf.py nudge_coords():840 88: 0.370 -0.0000802 0.0000437 852 5.73 0.96 1.41 2020-12-03 10:12:28.660303116 INFO 2024-04-09 23:08:51,300Z lrauvNc4ToNetcdf.py nudge_coords():840 89: 0.370 -0.0000138 -0.0000136 75 0.50 -3.43 -5.06 2020-12-03 10:12:59.028408051 INFO 2024-04-09 23:08:51,305Z lrauvNc4ToNetcdf.py nudge_coords():840 90: 0.412 -0.0000920 -0.0000122 1067 7.19 -0.21 -0.31 2020-12-03 10:20:10.917216063 INFO 2024-04-09 23:08:51,310Z lrauvNc4ToNetcdf.py nudge_coords():840 91: 0.367 0.0001257 -0.0000023 760 5.12 -0.06 -0.08 2020-12-03 10:25:18.499005079 INFO 2024-04-09 23:08:51,315Z lrauvNc4ToNetcdf.py nudge_coords():840 92: 0.396 0.0001808 0.0000340 761 5.13 0.83 1.23 2020-12-03 10:30:26.491024971 INFO 2024-04-09 23:08:51,320Z lrauvNc4ToNetcdf.py nudge_coords():840 93: 0.382 -0.0000732 -0.0000135 764 5.14 -0.33 -0.49 2020-12-03 10:35:35.483364105 INFO 2024-04-09 23:08:51,325Z lrauvNc4ToNetcdf.py nudge_coords():840 94: 0.352 -0.0000048 -0.0000101 86 0.57 -2.21 -3.25 2020-12-03 10:36:10.354439974 INFO 2024-04-09 23:08:51,330Z lrauvNc4ToNetcdf.py nudge_coords():840 95: 0.377 0.0000562 0.0000269 772 5.20 0.65 0.96 2020-12-03 10:41:22.651459932 INFO 2024-04-09 23:08:51,335Z lrauvNc4ToNetcdf.py nudge_coords():840 96: 0.367 0.0000556 0.0000115 353 2.38 0.61 0.89 2020-12-03 10:43:45.620362997 INFO 2024-04-09 23:08:51,340Z lrauvNc4ToNetcdf.py nudge_coords():840 97: 0.373 0.0001202 0.0000629 767 5.16 1.54 2.26 2020-12-03 10:48:55.598176003 INFO 2024-04-09 23:08:51,345Z lrauvNc4ToNetcdf.py nudge_coords():840 98: 0.399 0.0012072 0.0006324 9712 65.40 1.25 1.79 2020-12-03 11:54:19.745065928 INFO 2024-04-09 23:08:51,350Z lrauvNc4ToNetcdf.py nudge_coords():840 99: 0.379 0.0000097 -0.0000071 229 1.55 -0.59 -0.85 2020-12-03 11:55:52.944025040 INFO 2024-04-09 23:08:51,355Z lrauvNc4ToNetcdf.py nudge_coords():840 100: 0.386 0.0000090 0.0000322 659 4.44 0.94 1.34 2020-12-03 12:00:20.008183002 INFO 2024-04-09 23:08:51,360Z lrauvNc4ToNetcdf.py nudge_coords():840 101: 0.318 0.0000174 -0.0000114 402 2.72 -0.54 -0.78 2020-12-03 12:03:03.657527924 INFO 2024-04-09 23:08:51,365Z lrauvNc4ToNetcdf.py nudge_coords():840 102: 0.363 0.0022944 -0.0020311 9954 67.03 -3.84 -5.61 2020-12-03 13:10:05.828845978 INFO 2024-04-09 23:08:51,371Z lrauvNc4ToNetcdf.py nudge_coords():840 103: 0.364 0.0000241 0.0000077 115 0.77 1.27 1.85 2020-12-03 13:10:52.651480913 INFO 2024-04-09 23:08:51,376Z lrauvNc4ToNetcdf.py nudge_coords():840 104: 0.369 -0.0000250 -0.0000217 750 5.05 -0.54 -0.80 2020-12-03 13:15:56.098402977 INFO 2024-04-09 23:08:51,381Z lrauvNc4ToNetcdf.py nudge_coords():840 105: 0.373 0.0000239 0.0000113 817 5.51 0.26 0.38 2020-12-03 13:21:27.173686981 INFO 2024-04-09 23:08:51,386Z lrauvNc4ToNetcdf.py nudge_coords():840 106: 0.389 0.0000502 -0.0000265 765 5.15 -0.65 -0.95 2020-12-03 13:26:36.408385992 INFO 2024-04-09 23:08:51,391Z lrauvNc4ToNetcdf.py nudge_coords():840 107: 0.374 -0.0000054 -0.0000036 97 0.67 -0.68 -1.00 2020-12-03 13:27:16.856435061 INFO 2024-04-09 23:08:51,396Z lrauvNc4ToNetcdf.py nudge_coords():840 108: 0.358 0.0000176 -0.0000052 700 4.72 -0.14 -0.20 2020-12-03 13:32:00.705832005 INFO 2024-04-09 23:08:51,401Z lrauvNc4ToNetcdf.py nudge_coords():840 109: 0.376 -0.0000166 -0.0000325 408 2.76 -1.49 -2.19 2020-12-03 13:34:46.636703014 INFO 2024-04-09 23:08:51,406Z lrauvNc4ToNetcdf.py nudge_coords():840 110: 0.355 0.0014935 0.0001330 10380 69.91 0.24 0.35 2020-12-03 14:44:41.580457926 INFO 2024-04-09 23:08:51,412Z lrauvNc4ToNetcdf.py nudge_coords():840 111: 0.367 -0.0000092 0.0000195 87 0.59 4.11 6.16 2020-12-03 14:45:17.192295074 INFO 2024-04-09 23:08:51,417Z lrauvNc4ToNetcdf.py nudge_coords():840 112: 0.390 0.0017515 -0.0002106 10574 71.20 -0.36 -0.55 2020-12-03 15:56:29.501254082 INFO 2024-04-09 23:08:51,422Z lrauvNc4ToNetcdf.py nudge_coords():840 113: 0.373 0.0004063 0.0001526 481 3.24 5.71 8.73 2020-12-03 15:59:44.317312002 INFO 2024-04-09 23:08:51,427Z lrauvNc4ToNetcdf.py nudge_coords():840 114: 0.339 0.0002431 0.0001804 797 5.36 4.07 6.23 2020-12-03 16:05:06.594645023 INFO 2024-04-09 23:08:51,433Z lrauvNc4ToNetcdf.py nudge_coords():840 115: 0.348 -0.0003740 0.0002342 69 0.46 61.28 93.73 2020-12-03 16:05:34.738992929 INFO 2024-04-09 23:08:51,438Z lrauvNc4ToNetcdf.py nudge_coords():840 116: 0.406 0.0013710 -0.0002642 10370 69.83 -0.45 -0.70 2020-12-03 17:15:24.784109116 INFO 2024-04-09 23:08:51,444Z lrauvNc4ToNetcdf.py nudge_coords():840 117: 0.338 0.0000060 0.0000025 475 3.20 0.09 0.15 2020-12-03 17:18:37.212897062 INFO 2024-04-09 23:08:51,450Z lrauvNc4ToNetcdf.py nudge_coords():840 118: 0.371 0.0001844 -0.0000196 749 5.04 -0.46 -0.72 2020-12-03 17:23:40.100167036 INFO 2024-04-09 23:08:51,455Z lrauvNc4ToNetcdf.py nudge_coords():840 119: 0.364 0.0000112 -0.0000044 649 4.36 -0.12 -0.19 2020-12-03 17:28:02.379843950 INFO 2024-04-09 23:08:51,460Z lrauvNc4ToNetcdf.py nudge_coords():840 120: 0.360 -0.0000599 0.0000114 580 3.91 0.35 0.54 2020-12-03 17:31:57.078332901 INFO 2024-04-09 23:08:51,465Z lrauvNc4ToNetcdf.py nudge_coords():840 121: 0.356 -0.0020500 0.0006445 10255 69.05 1.13 1.73 2020-12-03 18:41:00.502517938 INFO 2024-04-09 23:08:51,471Z lrauvNc4ToNetcdf.py nudge_coords():840 122: 0.363 -0.0003635 0.0000675 1821 12.40 0.66 1.01 2020-12-03 18:53:25.038218021 INFO 2024-04-09 23:08:51,476Z lrauvNc4ToNetcdf.py nudge_coords():840 123: 0.385 0.0006745 -0.0001242 1235 8.55 -1.76 -2.69 2020-12-03 19:01:58.470839024 INFO 2024-04-09 23:08:51,481Z lrauvNc4ToNetcdf.py nudge_coords():840 124: 0.379 0.0000119 -0.0000061 73 0.51 -1.43 -2.18 2020-12-03 19:02:29.671981096 INFO 2024-04-09 23:08:51,486Z lrauvNc4ToNetcdf.py nudge_coords():840 125: 0.389 0.0009310 0.0005079 4941 34.14 1.81 2.76 2020-12-03 19:36:38.350827932 INFO 2024-04-09 23:08:51,491Z lrauvNc4ToNetcdf.py nudge_coords():840 126: 0.374 0.0001093 -0.0001170 908 6.16 -2.31 -3.52 2020-12-03 19:42:48.529238938 INFO 2024-04-09 23:08:51,497Z lrauvNc4ToNetcdf.py nudge_coords():840 127: 0.371 -0.0000035 -0.0000118 69 0.57 -2.50 -3.82 2020-12-03 19:43:23.296168089 INFO 2024-04-09 23:08:51,502Z lrauvNc4ToNetcdf.py nudge_coords():840 128: 0.374 0.0000723 -0.0000024 236 1.73 -0.17 -0.25 2020-12-03 19:45:07.195368052 INFO 2024-04-09 23:08:51,507Z lrauvNc4ToNetcdf.py nudge_coords():840 129: 0.383 0.0002058 -0.0000895 3446 23.20 -0.47 -0.72 2020-12-03 20:08:19.500089884 INFO 2024-04-09 23:08:51,512Z lrauvNc4ToNetcdf.py nudge_coords():840 130: 0.367 -0.0000121 0.0004707 300 2.22 25.58 39.30 2020-12-03 20:10:33.097670078 INFO 2024-04-09 23:08:51,517Z lrauvNc4ToNetcdf.py nudge_coords():840 131: 0.367 -0.0002047 0.0000047 3627 24.42 0.02 0.04 2020-12-03 20:34:58.549815893 INFO 2024-04-09 23:08:51,522Z lrauvNc4ToNetcdf.py nudge_coords():840 132: 0.366 0.0000706 0.0000266 194 1.42 2.24 3.47 2020-12-03 20:36:24.018877983 INFO 2024-04-09 23:08:51,528Z lrauvNc4ToNetcdf.py nudge_coords():871 134: - - - 3864 26.01 - - INFO 2024-04-09 23:08:51,531Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 407039 INFO 2024-04-09 23:08:51,560Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201201T221009/20201203T220225/data.csv INFO 2024-04-09 23:08:51,668Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:08:51,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:08:52,755Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:08:53,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201201T230959/202012012310_202012032102_2S_scieng.nc INFO 2024-04-09 23:08:53,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012012310_202012032102.nc4 INFO 2024-04-09 23:08:54,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201203T210225/202012032102_202012040713.nc4 file... INFO 2024-04-09 23:08:54,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012032102_202012040713.nc4 INFO 2024-04-09 23:08:58,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201203T210225/202012032102_202012040713.nc4 INFO 2024-04-09 23:08:58,284Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:58,416Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:58,548Z lrauvNc4ToNetcdf.py createSeries():299 depth : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:58,677Z lrauvNc4ToNetcdf.py createSeries():299 time : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:58,794Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:58,909Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,021Z lrauvNc4ToNetcdf.py createSeries():299 depth : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,128Z lrauvNc4ToNetcdf.py createSeries():299 time : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,231Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,341Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,451Z lrauvNc4ToNetcdf.py createSeries():299 depth : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,560Z lrauvNc4ToNetcdf.py createSeries():299 time : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,677Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,790Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:08:59,909Z lrauvNc4ToNetcdf.py createSeries():299 depth : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,032Z lrauvNc4ToNetcdf.py createSeries():299 time : 133 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:00,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:00,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:00,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:00,164Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 53 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:00,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:00,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:00,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:00,220Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 127 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:00,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:00,258Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 5 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,263Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:00,268Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 62 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:00,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:00,376Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 53 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:00,408Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 53 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:00,436Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 10 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:00,450Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 10 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:00,464Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 10 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:00,478Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 10 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:00,503Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:00,586Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,613Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:00,617Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:00,646Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:00,675Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:00,705Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:00,734Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:00,760Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:00,782Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 48 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:00,805Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:00,814Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,821Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:00,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:00,839Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:00,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:00,943Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:01,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:01,045Z lrauvNc4ToNetcdf.py createSeries():299 depth : 132 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:01,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:01,178Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 122 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:01,289Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:01,336Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 122 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:01,433Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:01,478Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 122 v_t values found before 2020-12-03 21:02:00 and after 2020-12-04 07:13:00 INFO 2024-04-09 23:09:01,578Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:01,579Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201203T210225/202012032102_202012040713.nc4 INFO 2024-04-09 23:09:01,805Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 90262 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:01,906Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 68 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201203T210225/202012032102_202012040713.nc4 INFO 2024-04-09 23:09:01,906Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:01,909Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:09:01,911Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.373 -0.0000810 0.0001079 261 1.95 6.54 10.24 2020-12-03 21:04:24.155332088 INFO 2024-04-09 23:09:01,915Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 0.0006801 -0.0004027 3974 26.75 -1.76 -2.79 2020-12-03 21:31:09.769475937 INFO 2024-04-09 23:09:01,918Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.363 0.0000621 0.0000070 138 1.04 0.78 1.24 2020-12-03 21:32:12.832386971 INFO 2024-04-09 23:09:01,922Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.383 0.0019373 -0.0009565 4905 33.03 -3.35 -5.37 2020-12-03 22:05:14.939235926 INFO 2024-04-09 23:09:01,925Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.377 -0.0005198 0.0002140 173 1.28 19.38 31.03 2020-12-03 22:06:32.028116941 INFO 2024-04-09 23:09:01,928Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.390 0.0056574 -0.0001342 3454 23.25 -0.67 -1.07 2020-12-03 22:29:47.594346046 INFO 2024-04-09 23:09:01,931Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.280 0.0000249 -0.0000943 232 1.68 -6.47 -10.40 2020-12-03 22:31:28.778419018 INFO 2024-04-09 23:09:01,935Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.377 0.0005033 0.0009131 3500 23.56 4.44 7.18 2020-12-03 22:55:02.850320101 INFO 2024-04-09 23:09:01,938Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.368 -0.0000140 -0.0000197 38 0.25 -9.04 -14.62 2020-12-03 22:55:18.205184937 INFO 2024-04-09 23:09:01,941Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.385 -0.0000572 -0.0007547 1049 7.29 -11.86 -19.19 2020-12-03 23:02:35.769077063 INFO 2024-04-09 23:09:01,944Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.333 -0.0009188 0.0003652 886 5.96 7.01 11.35 2020-12-03 23:08:33.861373901 INFO 2024-04-09 23:09:01,947Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.357 0.0000563 -0.0003412 823 5.54 -7.05 -11.42 2020-12-03 23:14:06.406518936 INFO 2024-04-09 23:09:01,950Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.382 -0.0000027 -0.0001435 354 2.38 -6.89 -11.17 2020-12-03 23:16:29.589261055 INFO 2024-04-09 23:09:01,953Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.362 -0.0000052 -0.0000190 44 0.29 -7.41 -12.01 2020-12-03 23:16:47.614516973 INFO 2024-04-09 23:09:01,956Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.377 0.0000132 -0.0000228 72 0.48 -5.46 -8.85 2020-12-03 23:17:16.687073946 INFO 2024-04-09 23:09:01,959Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.402 -0.0041167 0.0007851 4739 31.91 2.81 4.56 2020-12-03 23:49:11.600094080 INFO 2024-04-09 23:09:01,963Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.388 -0.0001218 -0.0001473 238 1.77 -9.52 -15.45 2020-12-03 23:50:58.027993917 INFO 2024-04-09 23:09:01,966Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.397 -0.0012272 -0.0001848 4824 32.48 -0.64 -1.05 2020-12-04 00:23:27.108833075 INFO 2024-04-09 23:09:01,969Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.365 0.0000478 0.0000094 1206 8.34 0.13 0.21 2020-12-04 00:31:47.896470070 INFO 2024-04-09 23:09:01,972Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.381 0.0000044 0.0000079 940 6.33 0.14 0.23 2020-12-04 00:38:07.850059986 INFO 2024-04-09 23:09:01,975Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.356 0.0000603 0.0000066 896 6.03 0.12 0.20 2020-12-04 00:44:10.219552040 INFO 2024-04-09 23:09:01,978Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.397 0.0000193 0.0000040 836 5.63 0.08 0.13 2020-12-04 00:49:48.152267933 INFO 2024-04-09 23:09:01,981Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.389 0.0000097 -0.0000160 942 6.34 -0.28 -0.47 2020-12-04 00:56:09.006807089 INFO 2024-04-09 23:09:01,985Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.380 0.0000227 0.0000006 130 0.87 0.08 0.13 2020-12-04 00:57:01.683247089 INFO 2024-04-09 23:09:01,987Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.336 0.0000353 0.0000018 262 1.76 0.12 0.19 2020-12-04 00:58:47.571074009 INFO 2024-04-09 23:09:01,990Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.372 0.0000128 -0.0000122 68 0.45 -3.03 -5.02 2020-12-04 00:59:15.003526926 INFO 2024-04-09 23:09:01,993Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.371 -0.0000063 0.0000266 1103 7.42 0.40 0.66 2020-12-04 01:06:40.676189899 INFO 2024-04-09 23:09:01,996Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.381 0.0000089 0.0000132 135 1.02 1.45 2.40 2020-12-04 01:07:42.282871962 INFO 2024-04-09 23:09:02,000Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.356 0.0000775 -0.0000439 1899 12.78 -0.39 -0.64 2020-12-04 01:20:29.599457026 INFO 2024-04-09 23:09:02,003Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.390 0.0000136 0.0000067 516 3.55 0.21 0.35 2020-12-04 01:24:03.103177071 INFO 2024-04-09 23:09:02,006Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.357 0.0001037 -0.0000713 1119 7.53 -1.06 -1.75 2020-12-04 01:31:35.597496986 INFO 2024-04-09 23:09:02,009Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.391 0.0000114 -0.0000023 419 2.99 -0.09 -0.14 2020-12-04 01:34:35.084992886 INFO 2024-04-09 23:09:02,013Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.376 0.0000283 -0.0000473 1095 7.37 -0.72 -1.19 2020-12-04 01:41:57.535057067 INFO 2024-04-09 23:09:02,016Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.366 0.0000189 0.0000081 97 0.73 1.23 2.04 2020-12-04 01:42:41.885293007 INFO 2024-04-09 23:09:02,019Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.376 0.0001292 0.0002262 2413 16.25 1.56 2.58 2020-12-04 01:58:57.119215012 INFO 2024-04-09 23:09:02,023Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.318 0.0000142 0.0000013 329 2.32 0.06 0.10 2020-12-04 02:01:16.853209019 INFO 2024-04-09 23:09:02,026Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.361 0.0001693 -0.0000849 2780 18.71 -0.51 -0.84 2020-12-04 02:20:00.046447992 INFO 2024-04-09 23:09:02,030Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.366 0.0000306 0.0000217 820 5.55 0.44 0.72 2020-12-04 02:25:33.272340059 INFO 2024-04-09 23:09:02,033Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.368 0.0000097 -0.0000390 1313 8.84 -0.49 -0.82 2020-12-04 02:34:23.791167021 INFO 2024-04-09 23:09:02,036Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.374 0.0000069 -0.0000014 139 1.01 -0.16 -0.27 2020-12-04 02:35:24.971158028 INFO 2024-04-09 23:09:02,039Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.380 0.0001065 0.0000764 3113 20.96 0.41 0.68 2020-12-04 02:56:22.747008085 INFO 2024-04-09 23:09:02,043Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.338 0.0000556 -0.0000115 1087 7.49 -0.17 -0.29 2020-12-04 03:03:52.395045042 INFO 2024-04-09 23:09:02,046Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.390 0.0000457 -0.0000068 1007 6.78 -0.11 -0.18 2020-12-04 03:10:39.331902981 INFO 2024-04-09 23:09:02,050Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.371 0.0000353 -0.0000120 860 5.79 -0.23 -0.38 2020-12-04 03:16:26.864414930 INFO 2024-04-09 23:09:02,053Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.370 0.0000086 -0.0000282 417 2.81 -1.12 -1.86 2020-12-04 03:19:15.621087074 INFO 2024-04-09 23:09:02,056Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.390 -0.0000032 -0.0000095 176 1.18 -0.90 -1.49 2020-12-04 03:20:26.868489981 INFO 2024-04-09 23:09:02,059Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.367 0.0000047 0.0000040 42 0.28 1.60 2.65 2020-12-04 03:20:43.916258097 INFO 2024-04-09 23:09:02,062Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.359 0.0000121 0.0000159 74 0.49 3.62 6.00 2020-12-04 03:21:13.824733973 INFO 2024-04-09 23:09:02,066Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.380 0.0001207 0.0000693 907 6.10 1.27 2.11 2020-12-04 03:27:20.256006956 INFO 2024-04-09 23:09:02,069Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.373 0.0000108 -0.0000037 184 1.32 -0.32 -0.52 2020-12-04 03:28:39.726140976 INFO 2024-04-09 23:09:02,072Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.380 0.0001726 0.0005446 4078 27.45 2.23 3.68 2020-12-04 03:56:07.411992073 INFO 2024-04-09 23:09:02,076Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.385 0.0000289 0.0000142 374 2.68 0.60 0.98 2020-12-04 03:58:48.807023048 INFO 2024-04-09 23:09:02,079Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.375 0.0001871 -0.0000536 1876 12.63 -0.48 -0.79 2020-12-04 04:11:26.992176056 INFO 2024-04-09 23:09:02,083Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.379 -0.0000031 -0.0000164 156 1.16 -1.60 -2.63 2020-12-04 04:12:36.776079893 INFO 2024-04-09 23:09:02,086Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.383 0.0000961 -0.0012358 4264 28.71 -4.79 -7.98 2020-12-04 04:41:19.716001987 INFO 2024-04-09 23:09:02,090Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.290 -0.0000103 -0.0000091 434 3.20 -0.31 -0.52 2020-12-04 04:44:32.280497074 INFO 2024-04-09 23:09:02,094Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.373 -0.0000040 0.0001426 1794 12.08 1.32 2.19 2020-12-04 04:56:37.402230024 INFO 2024-04-09 23:09:02,097Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.352 -0.0000055 -0.0000083 241 1.76 -0.53 -0.88 2020-12-04 04:58:23.247637987 INFO 2024-04-09 23:09:02,101Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.398 0.0000842 -0.0003017 3669 24.70 -1.37 -2.26 2020-12-04 05:23:05.891149998 INFO 2024-04-09 23:09:02,105Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.374 0.0000301 -0.0000197 242 1.76 -1.25 -2.07 2020-12-04 05:24:52.100356102 INFO 2024-04-09 23:09:02,108Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.381 -0.0000508 -0.0002401 1947 13.10 -2.04 -3.40 2020-12-04 05:37:58.756927013 INFO 2024-04-09 23:09:02,112Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.373 0.0000324 0.0000023 183 1.34 0.19 0.32 2020-12-04 05:39:19.470201015 INFO 2024-04-09 23:09:02,115Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.386 0.0000899 -0.0003707 1252 8.42 -4.89 -8.15 2020-12-04 05:47:45.313098907 INFO 2024-04-09 23:09:02,118Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.352 -0.0000191 -0.0000065 295 2.15 -0.34 -0.56 2020-12-04 05:49:54.675723076 INFO 2024-04-09 23:09:02,122Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.251 0.0002137 -0.0004409 4394 29.60 -1.65 -2.76 2020-12-04 06:19:31.228864908 INFO 2024-04-09 23:09:02,125Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.398 -0.0000203 -0.0000658 13 0.09 -82.07 -137.06 2020-12-04 06:19:36.916282892 INFO 2024-04-09 23:09:02,129Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.361 0.0000649 -0.0000826 796 5.62 -1.63 -2.72 2020-12-04 06:25:14.509505033 INFO 2024-04-09 23:09:02,133Z lrauvNc4ToNetcdf.py nudge_coords():871 68: - - - 7223 48.63 - - INFO 2024-04-09 23:09:02,133Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 90261 INFO 2024-04-09 23:09:02,162Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201203T200226/20201204T081353/data.csv INFO 2024-04-09 23:09:02,272Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:02,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:03,030Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:03,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201203T210225/202012032102_202012040713_2S_scieng.nc INFO 2024-04-09 23:09:03,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012032102_202012040713.nc4 INFO 2024-04-09 23:09:04,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T071353/202012040713_202012041813.nc4 file... INFO 2024-04-09 23:09:04,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012040713_202012041813.nc4 INFO 2024-04-09 23:09:04,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T071353/202012040713_202012041813.nc4 INFO 2024-04-09 23:09:04,844Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:04,985Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,134Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,283Z lrauvNc4ToNetcdf.py createSeries():299 time : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,422Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,548Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,668Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,787Z lrauvNc4ToNetcdf.py createSeries():299 time : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:05,911Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,040Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,182Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,313Z lrauvNc4ToNetcdf.py createSeries():299 time : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,459Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,596Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,726Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,862Z lrauvNc4ToNetcdf.py createSeries():299 time : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:06,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:06,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:06,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:07,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:07,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:07,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:07,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:07,065Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:07,076Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:07,095Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:07,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:07,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:07,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:07,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:07,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:07,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:07,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:07,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:07,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:07,358Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:07,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:07,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:07,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:07,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:07,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:07,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:07,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:07,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:07,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:07,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:07,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:07,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:07,719Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:07,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:07,818Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:07,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:07,916Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:07,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:08,053Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:08,159Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:08,208Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:08,316Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:08,368Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 32 v_t values found before 2020-12-04 07:13:00 and after 2020-12-04 18:13:00 INFO 2024-04-09 23:09:08,483Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:08,484Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T071353/202012040713_202012041813.nc4 INFO 2024-04-09 23:09:08,750Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 97681 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:08,877Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 31 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T071353/202012040713_202012041813.nc4 INFO 2024-04-09 23:09:08,878Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:08,880Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:09:08,882Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.360 0.0000471 -0.0000326 577 4.21 -0.84 -1.44 2020-12-04 07:18:07.311747074 INFO 2024-04-09 23:09:08,886Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 0.0012172 -0.0053996 7131 48.02 -11.84 -20.84 2020-12-04 08:06:08.886902094 INFO 2024-04-09 23:09:08,891Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.386 -0.0012820 0.0029658 775 5.45 57.49 100.75 2020-12-04 08:11:36.607157946 INFO 2024-04-09 23:09:08,894Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.372 -0.0028039 -0.0055009 8276 55.73 -10.27 -18.29 2020-12-04 09:07:20.551341057 INFO 2024-04-09 23:09:08,900Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.356 -0.0001836 -0.0001028 81 0.54 -19.80 -35.29 2020-12-04 09:07:53.347698927 INFO 2024-04-09 23:09:08,904Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.368 -0.0025595 -0.0047699 8951 60.28 -8.10 -14.66 2020-12-04 10:08:10.564378023 INFO 2024-04-09 23:09:08,910Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.382 -0.0010518 -0.0019815 7041 47.41 -4.22 -7.74 2020-12-04 10:55:35.578224897 INFO 2024-04-09 23:09:08,915Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.350 -0.0000266 -0.0000195 365 2.66 -0.74 -1.36 2020-12-04 10:58:15.415700912 INFO 2024-04-09 23:09:08,918Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.336 0.0008733 0.0000739 7168 48.27 0.15 0.28 2020-12-04 11:46:31.706058979 INFO 2024-04-09 23:09:08,923Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.391 -0.0000060 -0.0000192 344 2.45 -0.79 -1.45 2020-12-04 11:48:59.297410965 INFO 2024-04-09 23:09:08,927Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.379 0.0011899 0.0003725 7856 52.90 0.71 1.30 2020-12-04 12:41:53.556188107 INFO 2024-04-09 23:09:08,932Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.272 -0.0000074 0.0000086 100 0.67 1.29 2.37 2020-12-04 12:42:34.208947897 INFO 2024-04-09 23:09:08,935Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.353 0.0001193 -0.0000624 760 5.12 -1.23 -2.26 2020-12-04 12:47:41.723509073 INFO 2024-04-09 23:09:08,938Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.335 0.0000012 -0.0000082 461 3.11 -0.27 -0.49 2020-12-04 12:50:48.448260069 INFO 2024-04-09 23:09:08,941Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.357 0.0000244 0.0000032 928 6.25 0.05 0.09 2020-12-04 12:57:03.650697947 INFO 2024-04-09 23:09:08,945Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.382 -0.0000069 -0.0000027 85 0.57 -0.49 -0.90 2020-12-04 12:57:37.985323906 INFO 2024-04-09 23:09:08,948Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.375 0.0009658 0.0000504 7696 51.82 0.10 0.18 2020-12-04 13:49:27.796494007 INFO 2024-04-09 23:09:08,953Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.360 0.0000056 0.0000059 83 0.55 1.06 1.96 2020-12-04 13:50:01.378693104 INFO 2024-04-09 23:09:08,956Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.369 0.0010537 -0.0002032 7579 51.03 -0.40 -0.74 2020-12-04 14:41:03.774710894 INFO 2024-04-09 23:09:08,961Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 0.0000050 0.0000096 85 0.57 1.70 3.15 2020-12-04 14:41:38.137526989 INFO 2024-04-09 23:09:08,965Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.371 0.0008695 0.0000388 7701 51.85 0.07 0.14 2020-12-04 15:33:29.756184101 INFO 2024-04-09 23:09:08,970Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.408 -0.0001180 -0.0000586 1008 6.78 -0.86 -1.60 2020-12-04 15:40:17.199234009 INFO 2024-04-09 23:09:08,973Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 0.0000433 -0.0000072 831 5.60 -0.13 -0.24 2020-12-04 15:45:53.512162923 INFO 2024-04-09 23:09:08,977Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.379 0.0001379 -0.0003196 3325 22.39 -1.42 -2.65 2020-12-04 16:08:17.196326971 INFO 2024-04-09 23:09:08,980Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.342 0.0002520 -0.0004900 9542 64.35 -0.76 -1.41 2020-12-04 17:12:38.497989893 INFO 2024-04-09 23:09:08,986Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.369 -0.0000109 0.0000022 144 1.11 0.19 0.36 2020-12-04 17:13:45.586429119 INFO 2024-04-09 23:09:08,989Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.382 0.0000555 -0.0000881 904 6.08 -1.44 -2.68 2020-12-04 17:19:50.905138969 INFO 2024-04-09 23:09:08,992Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.368 -0.0000231 0.0000175 198 1.44 1.21 2.24 2020-12-04 17:21:17.975455999 INFO 2024-04-09 23:09:08,996Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.372 0.0003101 -0.0003210 6366 42.87 -0.75 -1.39 2020-12-04 18:04:10.319134951 INFO 2024-04-09 23:09:09,001Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.383 0.0000574 0.0000259 1027 7.08 0.37 0.68 2020-12-04 18:11:15.448051929 INFO 2024-04-09 23:09:09,004Z lrauvNc4ToNetcdf.py nudge_coords():871 31: - - - 289 1.94 - - INFO 2024-04-09 23:09:09,004Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 97680 INFO 2024-04-09 23:09:09,038Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201204T061354/20201204T191312/data.csv INFO 2024-04-09 23:09:09,139Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:09,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:09,529Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:09,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T071353/202012040713_202012041813_2S_scieng.nc INFO 2024-04-09 23:09:09,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012040713_202012041813.nc4 INFO 2024-04-09 23:09:10,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T181312/202012041813_202012041941.nc4 file... INFO 2024-04-09 23:09:10,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012041813_202012041941.nc4 INFO 2024-04-09 23:09:10,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T181312/202012041813_202012041941.nc4 INFO 2024-04-09 23:09:10,816Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:10,890Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:10,963Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,037Z lrauvNc4ToNetcdf.py createSeries():299 time : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,109Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,186Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,260Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,332Z lrauvNc4ToNetcdf.py createSeries():299 time : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,406Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,480Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,552Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,626Z lrauvNc4ToNetcdf.py createSeries():299 time : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,694Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,763Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,832Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,903Z lrauvNc4ToNetcdf.py createSeries():299 time : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:11,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:11,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:11,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:11,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:11,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:11,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:11,993Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:11,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:12,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:12,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:12,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:12,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:12,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:12,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:12,032Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:12,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:12,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:12,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:12,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:12,050Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:12,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:12,079Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:12,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:12,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:12,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:12,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:12,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:12,106Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:12,110Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:12,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:12,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:12,119Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:12,141Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:12,162Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:12,213Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 77 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,271Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:12,295Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 77 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,348Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:12,371Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 77 v_t values found before 2020-12-04 18:13:00 and after 2020-12-04 19:41:00 INFO 2024-04-09 23:09:12,427Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:12,428Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T181312/202012041813_202012041941.nc4 INFO 2024-04-09 23:09:12,549Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 13112 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:12,655Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 8 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T181312/202012041813_202012041941.nc4 INFO 2024-04-09 23:09:12,655Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:12,657Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 1120 7.54 - - - INFO 2024-04-09 23:09:12,658Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 -0.0000104 0.0000007 820 5.52 0.01 0.02 2020-12-04 18:26:16.912069082 INFO 2024-04-09 23:09:12,660Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.388 0.0001917 -0.0001476 5741 38.67 -0.38 -0.71 2020-12-04 19:04:57.419047117 INFO 2024-04-09 23:09:12,664Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.355 0.0000435 -0.0000159 1475 9.93 -0.16 -0.30 2020-12-04 19:14:53.710741997 INFO 2024-04-09 23:09:12,667Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.390 0.0000617 0.0000325 818 5.50 0.59 1.09 2020-12-04 19:20:24.256253004 INFO 2024-04-09 23:09:12,670Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.377 -0.0000086 0.0000010 1066 7.17 0.01 0.03 2020-12-04 19:27:35.197936058 INFO 2024-04-09 23:09:12,673Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.360 0.0000510 0.0000326 819 5.51 0.59 1.10 2020-12-04 19:33:06.156474113 INFO 2024-04-09 23:09:12,675Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.387 -0.0007512 0.0001110 1153 7.76 1.42 2.65 2020-12-04 19:40:52.155092955 INFO 2024-04-09 23:09:12,678Z lrauvNc4ToNetcdf.py nudge_coords():871 8: - - - 99 0.66 - - INFO 2024-04-09 23:09:12,678Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 13111 INFO 2024-04-09 23:09:12,705Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201204T171313/20201204T204132/data.csv INFO 2024-04-09 23:09:12,800Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:12,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:13,142Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:13,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201130_20201204/20201204T181312/202012041813_202012041941_2S_scieng.nc INFO 2024-04-09 23:09:13,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012041813_202012041941.nc4 INFO 2024-04-09 23:09:13,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201208T233441/202012082334_202012090515.nc4 file... INFO 2024-04-09 23:09:13,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012082334_202012090515.nc4 INFO 2024-04-09 23:09:14,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201208T233441/202012082334_202012090515.nc4 INFO 2024-04-09 23:09:14,402Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,487Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,578Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,675Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,756Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,831Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,909Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:14,987Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,064Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,142Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,218Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,293Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,372Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,448Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,524Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,603Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 WARNING 2024-04-09 23:09:15,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [37028 37029 37030 37031 37032 37033 37034 37035] WARNING 2024-04-09 23:09:15,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [37028 37029 37030 37031 37032 37033 37034 37035] WARNING 2024-04-09 23:09:15,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [37028 37029 37030 37031 37032 37033 37034 37035] WARNING 2024-04-09 23:09:15,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [37028 37029 37030 37031 37032 37033 37034 37035] INFO 2024-04-09 23:09:15,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:15,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:15,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:15,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:15,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:15,741Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:15,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:15,753Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:15,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:15,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:15,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:15,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:15,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:15,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:15,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:15,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:15,915Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:15,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:15,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:15,939Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:15,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:16,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:16,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:16,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:16,076Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:16,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:16,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:16,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:16,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:16,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:16,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:16,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:16,179Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:16,236Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:16,294Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:16,382Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,467Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:16,500Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,585Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:16,621Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 82 v_t values found before 2020-12-08 23:34:00 and after 2020-12-09 05:15:00 INFO 2024-04-09 23:09:16,705Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:16,706Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201208T233441/202012082334_202012090515.nc4 INFO 2024-04-09 23:09:16,862Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 50452 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:16,957Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 23 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201208T233441/202012082334_202012090515.nc4 INFO 2024-04-09 23:09:16,957Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:16,959Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 165 1.10 - - - INFO 2024-04-09 23:09:16,960Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.391 0.0000522 -0.0007070 727 4.89 -14.37 -26.78 2020-12-08 23:40:41.512516975 INFO 2024-04-09 23:09:16,963Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.424 0.0000447 -0.0007737 782 5.28 -14.56 -27.16 2020-12-08 23:45:58.618935108 INFO 2024-04-09 23:09:16,966Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.353 0.0007143 -0.0006869 4799 32.32 -2.08 -3.94 2020-12-09 00:18:18.278590918 INFO 2024-04-09 23:09:16,969Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.365 0.0002170 -0.0001100 233 1.77 -6.09 -11.52 2020-12-09 00:20:04.848089933 INFO 2024-04-09 23:09:16,971Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0000671 -0.0002708 4870 32.79 -0.81 -1.53 2020-12-09 00:52:52.508676052 INFO 2024-04-09 23:09:16,975Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.367 -0.0000560 -0.0000078 77 0.54 -1.42 -2.67 2020-12-09 00:53:25.478193045 INFO 2024-04-09 23:09:16,978Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.188 -0.0004832 -0.0004529 464 3.40 -13.11 -24.65 2020-12-09 00:56:50.153104067 INFO 2024-04-09 23:09:16,981Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.373 -0.0007820 -0.0008475 5000 33.66 -2.49 -4.67 2020-12-09 01:30:30.040385962 INFO 2024-04-09 23:09:16,984Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.372 -0.0001368 0.0000402 230 1.72 2.31 4.34 2020-12-09 01:32:13.510921001 INFO 2024-04-09 23:09:16,987Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.383 -0.0010678 -0.0004764 4934 33.22 -1.42 -2.66 2020-12-09 02:05:27.011738062 INFO 2024-04-09 23:09:16,990Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.396 0.0000187 0.0000599 291 2.12 2.80 5.22 2020-12-09 02:07:34.875981092 INFO 2024-04-09 23:09:16,993Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.345 -0.0000900 0.0004070 5264 35.44 1.14 2.13 2020-12-09 02:43:01.805668116 INFO 2024-04-09 23:09:16,997Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.377 -0.0001968 0.0003413 527 3.55 9.58 17.84 2020-12-09 02:46:34.899923086 INFO 2024-04-09 23:09:17,000Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.366 0.0001622 -0.0006017 5447 36.67 -1.64 -3.04 2020-12-09 03:23:15.752505064 INFO 2024-04-09 23:09:17,005Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.401 0.0000475 -0.0001078 728 4.90 -2.20 -4.08 2020-12-09 03:28:10.220822096 INFO 2024-04-09 23:09:17,008Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.366 0.0000551 -0.0000169 596 4.02 -0.42 -0.78 2020-12-09 03:32:11.669260025 INFO 2024-04-09 23:09:17,010Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.397 0.0000032 -0.0000091 38 0.25 -3.64 -6.77 2020-12-09 03:32:27.015666962 INFO 2024-04-09 23:09:17,013Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.377 0.0001105 0.0000197 840 5.66 0.35 0.64 2020-12-09 03:38:06.792026043 INFO 2024-04-09 23:09:17,016Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.371 0.0001204 -0.0000657 1358 9.09 -0.72 -1.34 2020-12-09 03:47:12.349272966 INFO 2024-04-09 23:09:17,019Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.380 0.0003902 -0.0001438 4957 33.39 -0.43 -0.80 2020-12-09 04:20:36.158051014 INFO 2024-04-09 23:09:17,022Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.369 0.0001373 -0.0000329 1461 10.05 -0.32 -0.61 2020-12-09 04:30:39.488317013 INFO 2024-04-09 23:09:17,024Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.382 0.0001491 -0.0000097 1363 9.18 -0.10 -0.20 2020-12-09 04:39:50.509984970 INFO 2024-04-09 23:09:17,028Z lrauvNc4ToNetcdf.py nudge_coords():871 23: - - - 5300 35.69 - - INFO 2024-04-09 23:09:17,028Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 50451 INFO 2024-04-09 23:09:17,055Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201208T223441/20201209T061533/data.csv INFO 2024-04-09 23:09:17,151Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:17,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:17,593Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:17,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201208T233441/202012082334_202012090515_2S_scieng.nc INFO 2024-04-09 23:09:17,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012082334_202012090515.nc4 INFO 2024-04-09 23:09:18,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T051533/202012090515_202012090534.nc4 file... INFO 2024-04-09 23:09:18,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012090515_202012090534.nc4 INFO 2024-04-09 23:09:18,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T051533/202012090515_202012090534.nc4 INFO 2024-04-09 23:09:18,452Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,510Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,567Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,625Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,681Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,738Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,794Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,850Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,907Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:18,963Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,020Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,076Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,133Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,190Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,246Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,302Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 WARNING 2024-04-09 23:09:19,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [733 734 735] WARNING 2024-04-09 23:09:19,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [733 734 735] WARNING 2024-04-09 23:09:19,343Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [732 733 734] WARNING 2024-04-09 23:09:19,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [732 733 734] INFO 2024-04-09 23:09:19,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:19,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:19,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:19,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:19,358Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:09:19,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:19,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:19,375Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:19,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping INFO 2024-04-09 23:09:19,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:09:19,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:09:19,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping INFO 2024-04-09 23:09:19,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping INFO 2024-04-09 23:09:19,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:09:19,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:09:19,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:09:19,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:09:19,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:09:19,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:09:19,394Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:19,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:09:19,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:09:19,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:09:19,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:09:19,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:09:19,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:09:19,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:09:19,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:09:19,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:19,415Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:19,423Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:19,431Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:19,464Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,506Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:19,524Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,566Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:19,585Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 125 v_t values found before 2020-12-09 05:15:00 and after 2020-12-09 05:34:00 INFO 2024-04-09 23:09:19,627Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:19,628Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T051533/202012090515_202012090534.nc4 INFO 2024-04-09 23:09:19,723Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 2865 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:19,815Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T051533/202012090515_202012090534.nc4 INFO 2024-04-09 23:09:19,815Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:19,816Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:09:19,817Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.383 0.0000277 -0.0000454 829 5.55 -0.81 -1.51 2020-12-09 05:21:07.873014927 INFO 2024-04-09 23:09:19,819Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 0.0001011 0.0000250 827 5.57 0.45 0.83 2020-12-09 05:26:42.244941950 INFO 2024-04-09 23:09:19,822Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.377 0.0000940 -0.0000217 819 5.52 -0.39 -0.73 2020-12-09 05:32:13.735558033 INFO 2024-04-09 23:09:19,824Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 386 2.59 - - INFO 2024-04-09 23:09:19,824Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 2864 INFO 2024-04-09 23:09:19,842Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T041533/20201209T063450/data.csv INFO 2024-04-09 23:09:19,936Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:19,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'PAR', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:20,179Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:20,365Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T051533/202012090515_202012090534_2S_scieng.nc INFO 2024-04-09 23:09:20,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012090515_202012090534.nc4 INFO 2024-04-09 23:09:20,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T053450/202012090534_202012090628.nc4 file... INFO 2024-04-09 23:09:20,668Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012090534_202012090628.nc4 INFO 2024-04-09 23:09:21,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T053450/202012090534_202012090628.nc4 INFO 2024-04-09 23:09:21,110Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,180Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,244Z lrauvNc4ToNetcdf.py createSeries():299 depth : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,307Z lrauvNc4ToNetcdf.py createSeries():299 time : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,368Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,432Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,492Z lrauvNc4ToNetcdf.py createSeries():299 depth : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,553Z lrauvNc4ToNetcdf.py createSeries():299 time : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,611Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,668Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,726Z lrauvNc4ToNetcdf.py createSeries():299 depth : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,783Z lrauvNc4ToNetcdf.py createSeries():299 time : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,843Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,901Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:21,959Z lrauvNc4ToNetcdf.py createSeries():299 depth : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,016Z lrauvNc4ToNetcdf.py createSeries():299 time : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:22,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:22,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:22,073Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:22,074Z lrauvNc4ToNetcdf.py createSeries():299 flow_rate: 48 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:22,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:09:22,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:09:22,090Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:22,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:22,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:22,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:22,106Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 53 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:22,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:22,123Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 47 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:22,130Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 47 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:22,137Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 9 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:22,142Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 9 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:22,147Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 9 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:22,152Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 9 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:22,158Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:22,173Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:22,180Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:22,187Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:22,194Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:22,200Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:22,207Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:22,213Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:22,219Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 42 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:22,225Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:22,229Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:22,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:22,238Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:22,253Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:22,267Z lrauvNc4ToNetcdf.py createSeries():299 depth : 120 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:22,306Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 118 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,353Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:22,373Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 118 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,419Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:22,439Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 118 v_t values found before 2020-12-09 05:34:00 and after 2020-12-09 06:28:00 INFO 2024-04-09 23:09:22,487Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:22,488Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T053450/202012090534_202012090628.nc4 INFO 2024-04-09 23:09:22,587Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 7952 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:22,676Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 8 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T053450/202012090534_202012090628.nc4 INFO 2024-04-09 23:09:22,677Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:22,678Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 320 2.15 - - - INFO 2024-04-09 23:09:22,679Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.266 0.0000264 0.0000017 247 1.66 0.10 0.19 2020-12-09 05:38:39.815351963 INFO 2024-04-09 23:09:22,681Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.363 0.0000321 -0.0002313 1733 11.68 -1.97 -3.67 2020-12-09 05:50:20.834750891 INFO 2024-04-09 23:09:22,683Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.394 0.0000265 -0.0000111 256 1.87 -0.59 -1.10 2020-12-09 05:52:13.474901915 INFO 2024-04-09 23:09:22,685Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.397 0.0000113 -0.0000161 1828 12.32 -0.13 -0.24 2020-12-09 06:04:32.922678947 INFO 2024-04-09 23:09:22,687Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.367 0.0000086 -0.0000015 191 1.38 -0.11 -0.20 2020-12-09 06:05:55.959739923 INFO 2024-04-09 23:09:22,690Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.328 -0.0000177 -0.0000065 1626 10.95 -0.06 -0.11 2020-12-09 06:16:53.176512957 INFO 2024-04-09 23:09:22,692Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.358 0.0000189 -0.0000208 326 2.31 -0.90 -1.67 2020-12-09 06:19:12.206871986 INFO 2024-04-09 23:09:22,695Z lrauvNc4ToNetcdf.py nudge_coords():871 8: - - - 1424 9.59 - - INFO 2024-04-09 23:09:22,695Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 7951 INFO 2024-04-09 23:09:22,717Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T043450/20201209T072848/data.csv INFO 2024-04-09 23:09:22,814Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:22,818Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:23,195Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:23,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T053450/202012090534_202012090628_2S_scieng.nc INFO 2024-04-09 23:09:23,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012090534_202012090628.nc4 INFO 2024-04-09 23:09:24,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T062848/202012090628_202012091452.nc4 file... INFO 2024-04-09 23:09:24,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012090628_202012091452.nc4 INFO 2024-04-09 23:09:24,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T062848/202012090628_202012091452.nc4 INFO 2024-04-09 23:09:24,618Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:24,716Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:24,815Z lrauvNc4ToNetcdf.py createSeries():299 depth : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:24,920Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,015Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,100Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,186Z lrauvNc4ToNetcdf.py createSeries():299 depth : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,281Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,369Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,454Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,546Z lrauvNc4ToNetcdf.py createSeries():299 depth : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,637Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,729Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,814Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,903Z lrauvNc4ToNetcdf.py createSeries():299 depth : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:25,988Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 WARNING 2024-04-09 23:09:26,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [34864 34865 34866 34867 34868 34869 34870 34871 34872 34873] WARNING 2024-04-09 23:09:26,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [34864 34865 34866 34867 34868 34869 34870 34871 34872 34873] WARNING 2024-04-09 23:09:26,063Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [34864 34865 34866 34867 34868 34869 34870 34871 34872 34873] WARNING 2024-04-09 23:09:26,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [34864 34865 34866 34867 34868 34869 34870 34871 34872 34873] INFO 2024-04-09 23:09:26,072Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:26,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:26,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:26,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:26,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:26,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:26,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:26,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:26,145Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 57 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:26,153Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 1 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:26,162Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 12 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:26,168Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 43 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,183Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:26,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:26,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:26,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:26,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:26,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:26,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:26,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:26,296Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:26,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:26,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:26,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:26,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:26,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:26,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:26,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:26,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:26,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:26,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:26,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:26,519Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:26,601Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:26,681Z lrauvNc4ToNetcdf.py createSeries():299 depth : 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:26,786Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:26,881Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:26,921Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:27,018Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:27,059Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 60 v_t values found before 2020-12-09 06:28:00 and after 2020-12-09 14:52:00 INFO 2024-04-09 23:09:27,155Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:27,156Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T062848/202012090628_202012091452.nc4 INFO 2024-04-09 23:09:27,335Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 74593 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:27,426Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 59 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T062848/202012090628_202012091452.nc4 INFO 2024-04-09 23:09:27,427Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:27,429Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:09:27,430Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 0.0000040 -0.0000035 38 0.25 -1.40 -2.60 2020-12-09 06:29:04.317179918 INFO 2024-04-09 23:09:27,434Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.368 0.0000780 -0.0003815 7473 50.48 -0.75 -1.40 2020-12-09 07:19:33.396447897 INFO 2024-04-09 23:09:27,438Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.324 0.0000533 -0.0000025 462 3.46 -0.07 -0.14 2020-12-09 07:23:01.259232998 INFO 2024-04-09 23:09:27,441Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.366 0.0000528 -0.0001856 6431 43.30 -0.43 -0.79 2020-12-09 08:06:19.537134886 INFO 2024-04-09 23:09:27,446Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.369 0.0000078 -0.0000083 137 1.03 -0.80 -1.49 2020-12-09 08:07:21.992285013 INFO 2024-04-09 23:09:27,449Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.377 0.0000801 -0.0001997 6474 43.59 -0.46 -0.85 2020-12-09 08:50:58.079301119 INFO 2024-04-09 23:09:27,453Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.361 0.0000368 -0.0000022 229 1.66 -0.13 -0.25 2020-12-09 08:52:37.821706057 INFO 2024-04-09 23:09:27,457Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.360 0.0000740 -0.0001683 6598 44.43 -0.38 -0.70 2020-12-09 09:37:03.831294060 INFO 2024-04-09 23:09:27,461Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.322 -0.0000232 -0.0000130 733 5.23 -0.25 -0.46 2020-12-09 09:42:17.822890043 INFO 2024-04-09 23:09:27,464Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.352 0.0000194 0.0000076 43 0.28 2.66 4.95 2020-12-09 09:42:35.165383101 INFO 2024-04-09 23:09:27,467Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.387 0.0001799 -0.0000878 909 6.17 -1.41 -2.64 2020-12-09 09:48:45.821571112 INFO 2024-04-09 23:09:27,470Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.381 0.0001210 -0.0000625 1153 7.87 -0.79 -1.47 2020-12-09 09:56:38.354600906 INFO 2024-04-09 23:09:27,473Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.362 0.0001848 -0.0000618 902 6.15 -0.99 -1.86 2020-12-09 10:02:47.915186882 INFO 2024-04-09 23:09:27,476Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.366 0.0001243 -0.0000367 817 5.50 -0.66 -1.24 2020-12-09 10:08:18.058932066 INFO 2024-04-09 23:09:27,479Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.375 0.0001292 -0.0000359 839 5.65 -0.63 -1.18 2020-12-09 10:13:57.221787930 INFO 2024-04-09 23:09:27,482Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.372 0.0001393 -0.0000582 819 5.51 -1.04 -1.96 2020-12-09 10:19:28.301871061 INFO 2024-04-09 23:09:27,486Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.392 0.0000445 -0.0000784 829 5.51 -1.40 -2.64 2020-12-09 10:24:59.170411110 INFO 2024-04-09 23:09:27,489Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.385 0.0001722 -0.0000662 818 5.50 -1.18 -2.23 2020-12-09 10:30:29.727442980 INFO 2024-04-09 23:09:27,492Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.380 0.0001115 -0.0000910 824 5.54 -1.61 -3.04 2020-12-09 10:36:02.650365114 INFO 2024-04-09 23:09:27,495Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.363 0.0001044 -0.0000382 837 5.63 -0.67 -1.26 2020-12-09 10:41:40.849756956 INFO 2024-04-09 23:09:27,498Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.375 0.0001219 -0.0000773 819 5.51 -1.37 -2.60 2020-12-09 10:47:11.785629988 INFO 2024-04-09 23:09:27,501Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.361 0.0000702 -0.0000176 819 5.51 -0.31 -0.59 2020-12-09 10:52:42.790244102 INFO 2024-04-09 23:09:27,504Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.368 0.0000787 -0.0000362 818 5.50 -0.64 -1.22 2020-12-09 10:58:13.326472044 INFO 2024-04-09 23:09:27,508Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.382 0.0000719 -0.0000561 836 5.62 -0.98 -1.85 2020-12-09 11:03:51.013250113 INFO 2024-04-09 23:09:27,511Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.365 0.0000717 -0.0000201 819 5.51 -0.36 -0.67 2020-12-09 11:09:22.192605019 INFO 2024-04-09 23:09:27,514Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.388 0.0000870 -0.0000774 817 5.50 -1.37 -2.61 2020-12-09 11:14:52.405224085 INFO 2024-04-09 23:09:27,517Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.366 0.0000988 -0.0000467 817 5.50 -0.83 -1.58 2020-12-09 11:20:22.540680885 INFO 2024-04-09 23:09:27,520Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.382 0.0000885 -0.0000303 827 5.56 -0.53 -1.01 2020-12-09 11:25:56.786194086 INFO 2024-04-09 23:09:27,523Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.387 0.0000792 -0.0000688 826 5.56 -1.20 -2.29 2020-12-09 11:31:30.658081055 INFO 2024-04-09 23:09:27,527Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.362 0.0000991 -0.0000387 818 5.50 -0.68 -1.31 2020-12-09 11:37:01.049245119 INFO 2024-04-09 23:09:27,530Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.360 0.0000509 -0.0000618 819 5.51 -1.09 -2.08 2020-12-09 11:42:32.029480934 INFO 2024-04-09 23:09:27,533Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.380 0.0001451 -0.0000655 821 5.52 -1.15 -2.20 2020-12-09 11:48:03.754878044 INFO 2024-04-09 23:09:27,537Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.363 0.0001042 -0.0000781 831 5.59 -1.35 -2.59 2020-12-09 11:53:39.664290905 INFO 2024-04-09 23:09:27,540Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.377 0.0001159 -0.0000692 819 5.51 -1.22 -2.33 2020-12-09 11:59:10.631920099 INFO 2024-04-09 23:09:27,543Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.364 0.0001284 -0.0000739 819 5.51 -1.30 -2.49 2020-12-09 12:04:41.478041887 INFO 2024-04-09 23:09:27,546Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.377 0.0000774 -0.0000243 818 5.50 -0.43 -0.82 2020-12-09 12:10:12.025635958 INFO 2024-04-09 23:09:27,549Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.380 0.0000643 -0.0000258 837 5.64 -0.44 -0.85 2020-12-09 12:15:50.875027895 INFO 2024-04-09 23:09:27,552Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.375 0.0000903 -0.0000868 820 5.52 -1.52 -2.92 2020-12-09 12:21:22.361758947 INFO 2024-04-09 23:09:27,555Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.383 0.0001036 -0.0000679 820 5.51 -1.19 -2.28 2020-12-09 12:26:53.460558891 INFO 2024-04-09 23:09:27,559Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.394 0.0001244 -0.0000640 819 5.51 -1.12 -2.15 2020-12-09 12:32:24.391577959 INFO 2024-04-09 23:09:27,562Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.378 0.0000508 -0.0000797 824 5.55 -1.38 -2.66 2020-12-09 12:37:57.779468060 INFO 2024-04-09 23:09:27,565Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.383 0.0000732 -0.0000744 828 5.57 -1.29 -2.48 2020-12-09 12:43:32.282229900 INFO 2024-04-09 23:09:27,568Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.380 0.0001196 -0.0000511 819 5.51 -0.89 -1.72 2020-12-09 12:49:03.245372057 INFO 2024-04-09 23:09:27,571Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.354 -0.0000027 -0.0000691 819 5.51 -1.21 -2.32 2020-12-09 12:54:34.300081968 INFO 2024-04-09 23:09:27,574Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.382 0.0000094 -0.0000093 818 5.51 -0.16 -0.31 2020-12-09 13:00:05.119273901 INFO 2024-04-09 23:09:27,578Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.381 0.0000489 -0.0000413 836 5.62 -0.71 -1.36 2020-12-09 13:05:42.812562943 INFO 2024-04-09 23:09:27,581Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.373 0.0000174 -0.0000240 818 5.50 -0.42 -0.81 2020-12-09 13:11:13.385674953 INFO 2024-04-09 23:09:27,584Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.394 0.0000187 -0.0000589 819 5.51 -1.03 -1.98 2020-12-09 13:16:44.396477938 INFO 2024-04-09 23:09:27,587Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.438 0.0000054 -0.0000260 817 5.50 -0.46 -0.88 2020-12-09 13:22:14.605828047 INFO 2024-04-09 23:09:27,590Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.383 0.0000282 -0.0000880 836 5.62 -1.51 -2.90 2020-12-09 13:27:52.404400110 INFO 2024-04-09 23:09:27,593Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.376 0.0000214 -0.0000065 819 5.51 -0.11 -0.22 2020-12-09 13:33:23.404685020 INFO 2024-04-09 23:09:27,596Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.372 0.0000712 -0.0000859 820 5.52 -1.50 -2.89 2020-12-09 13:38:54.832535982 INFO 2024-04-09 23:09:27,600Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.385 0.0001106 -0.0000929 819 5.50 -1.63 -3.13 2020-12-09 13:44:25.465390921 INFO 2024-04-09 23:09:27,603Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.368 -0.0000465 -0.0000412 827 5.56 -0.71 -1.37 2020-12-09 13:49:59.680766106 INFO 2024-04-09 23:09:27,606Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.377 0.0000783 -0.0000939 828 5.57 -1.63 -3.12 2020-12-09 13:55:34.383810997 INFO 2024-04-09 23:09:27,609Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.380 0.0000804 0.0000012 820 5.52 0.02 0.04 2020-12-09 14:01:05.740494967 INFO 2024-04-09 23:09:27,612Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.375 0.0001599 -0.0000864 588 3.95 -2.12 -4.05 2020-12-09 14:05:03.279259920 INFO 2024-04-09 23:09:27,615Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.379 0.0000493 -0.0000200 159 1.06 -1.83 -3.49 2020-12-09 14:06:07.511169910 INFO 2024-04-09 23:09:27,619Z lrauvNc4ToNetcdf.py nudge_coords():871 59: - - - 6872 46.27 - - INFO 2024-04-09 23:09:27,619Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 74592 INFO 2024-04-09 23:09:27,646Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T052848/20201209T155224/data.csv INFO 2024-04-09 23:09:27,743Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:27,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:28,225Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:28,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T062848/202012090628_202012091452_2S_scieng.nc INFO 2024-04-09 23:09:28,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012090628_202012091452.nc4 INFO 2024-04-09 23:09:29,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T145224/202012091452_202012091951.nc4 file... INFO 2024-04-09 23:09:29,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012091452_202012091951.nc4 INFO 2024-04-09 23:09:29,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T145224/202012091452_202012091951.nc4 INFO 2024-04-09 23:09:29,748Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:29,827Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:29,907Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:29,985Z lrauvNc4ToNetcdf.py createSeries():299 time : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,071Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,142Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,213Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,284Z lrauvNc4ToNetcdf.py createSeries():299 time : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,355Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,425Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,496Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,566Z lrauvNc4ToNetcdf.py createSeries():299 time : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,635Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,707Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,777Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:30,851Z lrauvNc4ToNetcdf.py createSeries():299 time : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 WARNING 2024-04-09 23:09:30,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [32190 32191 32192 32193 32194 32195 32196 32197 42215 42216] WARNING 2024-04-09 23:09:30,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [32190 32191 32192 32193 32194 32195 32196 32197 42215 42216] WARNING 2024-04-09 23:09:30,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [32190 32191 32192 32193 32194 32195 32196 32197 42215 42216] WARNING 2024-04-09 23:09:30,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [32190 32191 32192 32193 32194 32195 32196 32197 42215 42216] INFO 2024-04-09 23:09:30,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:30,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:30,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:30,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:30,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:30,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:30,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:30,977Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:30,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:30,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:30,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:31,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:31,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:31,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:31,079Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:31,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:31,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:31,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:31,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:31,105Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:31,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:31,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:31,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:31,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:31,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:31,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:31,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:31,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:31,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:31,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:31,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:31,237Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:31,284Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:31,330Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:31,405Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,477Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:31,516Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,590Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:31,621Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 7 v_t values found before 2020-12-09 14:52:00 and after 2020-12-09 19:51:00 INFO 2024-04-09 23:09:31,692Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:31,694Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T145224/202012091452_202012091951.nc4 INFO 2024-04-09 23:09:31,830Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 44187 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:31,921Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 29 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T145224/202012091452_202012091951.nc4 INFO 2024-04-09 23:09:31,921Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:31,923Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:09:31,924Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.366 -0.0000319 0.0000032 217 1.59 0.20 0.38 2020-12-09 14:54:00.691617966 INFO 2024-04-09 23:09:31,926Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.363 -0.0012496 0.0014342 6912 46.53 3.16 5.71 2020-12-09 15:40:33.166454077 INFO 2024-04-09 23:09:31,929Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.375 -0.0000162 -0.0000026 155 1.09 -0.25 -0.45 2020-12-09 15:41:39.222213030 INFO 2024-04-09 23:09:31,931Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.374 -0.0010936 0.0013383 6992 47.07 2.99 5.27 2020-12-09 16:28:43.999345064 INFO 2024-04-09 23:09:31,935Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.366 0.0000116 -0.0000311 138 0.98 -3.34 -5.89 2020-12-09 16:29:43.139524937 INFO 2024-04-09 23:09:31,938Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.368 0.0018381 0.0025710 6858 46.17 5.99 10.32 2020-12-09 17:15:53.769531965 INFO 2024-04-09 23:09:31,941Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.378 -0.0000573 0.0000169 207 1.51 1.20 2.07 2020-12-09 17:17:24.711226940 INFO 2024-04-09 23:09:31,944Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.376 -0.0002782 0.0018031 7150 48.14 4.13 6.94 2020-12-09 18:05:33.337321997 INFO 2024-04-09 23:09:31,947Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.256 0.0006583 -0.0000112 854 5.81 -0.21 -0.36 2020-12-09 18:11:22.087987900 INFO 2024-04-09 23:09:31,949Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.368 0.0005239 -0.0000518 47 0.31 -18.40 -30.92 2020-12-09 18:11:40.968657970 INFO 2024-04-09 23:09:31,952Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.368 -0.0000205 0.0000130 11 0.07 21.14 35.53 2020-12-09 18:11:45.416668892 INFO 2024-04-09 23:09:31,954Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.351 0.0000867 -0.0000185 80 0.53 -3.82 -6.42 2020-12-09 18:12:17.830941916 INFO 2024-04-09 23:09:31,956Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.379 0.0002087 0.0000168 391 2.63 0.71 1.19 2020-12-09 18:14:56.031358957 INFO 2024-04-09 23:09:31,959Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.376 0.0003235 0.0000390 466 3.32 1.30 2.18 2020-12-09 18:18:15.377476931 INFO 2024-04-09 23:09:31,961Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.372 0.0008008 -0.0000324 1183 7.99 -0.45 -0.75 2020-12-09 18:26:15.122385979 INFO 2024-04-09 23:09:31,963Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.394 0.0001247 -0.0000250 156 1.14 -2.43 -4.08 2020-12-09 18:27:23.628504038 INFO 2024-04-09 23:09:31,966Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 0.0000090 0.0000003 6 0.03 1.13 1.89 2020-12-09 18:27:26.063163996 INFO 2024-04-09 23:09:31,968Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.387 0.0000083 0.0000007 11 0.07 1.09 1.83 2020-12-09 18:27:30.490226030 INFO 2024-04-09 23:09:31,970Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.419 0.0001067 -0.0000180 126 0.84 -2.36 -3.96 2020-12-09 18:28:21.396239042 INFO 2024-04-09 23:09:31,973Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 0.0004844 -0.0004409 2592 17.39 -2.82 -4.70 2020-12-09 18:45:45.389698029 INFO 2024-04-09 23:09:31,975Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.378 0.0000291 -0.0000037 6 0.03 -12.24 -20.42 2020-12-09 18:45:47.805340052 INFO 2024-04-09 23:09:31,978Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.365 0.0006433 0.0001775 1973 13.28 1.49 2.48 2020-12-09 18:59:04.965053082 INFO 2024-04-09 23:09:31,980Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.369 0.0000054 -0.0000129 612 4.35 -0.33 -0.55 2020-12-09 19:03:26.077461004 INFO 2024-04-09 23:09:31,983Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.376 0.0002945 0.0000921 1721 11.58 0.89 1.47 2020-12-09 19:15:01.413443089 INFO 2024-04-09 23:09:31,985Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.375 0.0003048 0.0001281 1778 11.97 1.21 1.98 2020-12-09 19:26:59.760253906 INFO 2024-04-09 23:09:31,988Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.386 0.0008309 -0.0011186 1074 7.42 -17.04 -27.92 2020-12-09 19:34:25.565155983 INFO 2024-04-09 23:09:31,991Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.366 0.0001336 0.0007230 829 5.56 14.71 24.08 2020-12-09 19:39:59.715498924 INFO 2024-04-09 23:09:31,993Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.365 -0.0002730 0.0001484 827 5.57 3.02 4.94 2020-12-09 19:45:34.027694941 INFO 2024-04-09 23:09:31,996Z lrauvNc4ToNetcdf.py nudge_coords():871 29: - - - 812 5.46 - - INFO 2024-04-09 23:09:31,996Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 44186 INFO 2024-04-09 23:09:32,022Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T135224/20201209T205102/data.csv INFO 2024-04-09 23:09:32,119Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:32,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:32,629Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:33,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T145224/202012091452_202012091951_2S_scieng.nc INFO 2024-04-09 23:09:33,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012091452_202012091951.nc4 INFO 2024-04-09 23:09:33,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T195102/202012091951_202012100004.nc4 file... INFO 2024-04-09 23:09:33,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012091951_202012100004.nc4 INFO 2024-04-09 23:09:34,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T195102/202012091951_202012100004.nc4 INFO 2024-04-09 23:09:34,062Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,138Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,214Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,290Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,363Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,433Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,503Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,574Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,648Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,718Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,790Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,860Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:34,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,001Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,072Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,142Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 WARNING 2024-04-09 23:09:35,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [28199 28200 28201 28202 28203 28204] WARNING 2024-04-09 23:09:35,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [28199 28200 28201 28202 28203 28204] WARNING 2024-04-09 23:09:35,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [28199 28200 28201 28202 28203 28204] WARNING 2024-04-09 23:09:35,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [28199 28200 28201 28202 28203 28204] INFO 2024-04-09 23:09:35,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:35,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:35,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:35,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:35,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:35,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:35,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:35,244Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:35,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:35,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:35,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:35,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:35,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:35,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:35,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:35,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:35,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:35,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:35,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:35,345Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:35,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:35,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:35,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:35,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:35,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:35,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:35,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:35,419Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:35,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:35,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:35,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:35,435Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:35,476Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:35,516Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:35,582Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,649Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:35,675Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,743Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:35,772Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 96 v_t values found before 2020-12-09 19:51:00 and after 2020-12-10 00:04:00 INFO 2024-04-09 23:09:35,843Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:35,843Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T195102/202012091951_202012100004.nc4 INFO 2024-04-09 23:09:35,986Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 37528 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:36,078Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 20 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T195102/202012091951_202012100004.nc4 INFO 2024-04-09 23:09:36,079Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:36,080Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:09:36,081Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.361 0.0000360 0.0000263 63 0.42 7.13 11.67 2020-12-09 19:51:30.861157894 INFO 2024-04-09 23:09:36,084Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.378 0.0001692 -0.0003690 276 1.85 -22.58 -36.94 2020-12-09 19:53:22.308830976 INFO 2024-04-09 23:09:36,087Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.383 0.0023362 -0.0000099 4475 30.12 -0.04 -0.06 2020-12-09 20:23:30.207882881 INFO 2024-04-09 23:09:36,091Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.371 0.0000765 0.0000360 193 1.41 2.93 4.73 2020-12-09 20:24:55.191148996 INFO 2024-04-09 23:09:36,095Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.382 0.0016775 0.0025507 7010 47.19 6.23 10.01 2020-12-09 21:12:07.219856024 INFO 2024-04-09 23:09:36,100Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.376 0.0001378 0.0000607 271 1.93 3.62 5.81 2020-12-09 21:14:03.629976034 INFO 2024-04-09 23:09:36,103Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.374 0.0019018 0.0035256 6940 46.73 8.71 13.98 2020-12-09 22:00:47.540085077 INFO 2024-04-09 23:09:36,109Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.366 -0.0000212 0.0000274 103 0.72 4.41 7.09 2020-12-09 22:01:30.859232903 INFO 2024-04-09 23:09:36,112Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.368 -0.0001454 0.0000241 487 3.54 0.78 1.26 2020-12-09 22:05:03.429167986 INFO 2024-04-09 23:09:36,115Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.364 0.0001752 0.0004376 5514 37.12 1.37 2.18 2020-12-09 22:42:11.090215921 INFO 2024-04-09 23:09:36,120Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.372 0.0000605 0.0000185 933 6.39 0.34 0.53 2020-12-09 22:48:35.084053040 INFO 2024-04-09 23:09:36,123Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.379 0.0000619 0.0000102 832 5.60 0.21 0.34 2020-12-09 22:54:11.402183056 INFO 2024-04-09 23:09:36,126Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.370 0.0001352 -0.0000230 1286 8.62 -0.31 -0.49 2020-12-09 23:02:48.822810888 INFO 2024-04-09 23:09:36,129Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.378 0.0001351 -0.0000169 869 5.85 -0.34 -0.53 2020-12-09 23:08:39.962625027 INFO 2024-04-09 23:09:36,131Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.377 0.0006051 0.0003901 3310 22.29 2.05 3.24 2020-12-09 23:30:57.655864954 INFO 2024-04-09 23:09:36,134Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 0.0000443 0.0000197 375 2.75 0.84 1.33 2020-12-09 23:33:43.154048920 INFO 2024-04-09 23:09:36,137Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.376 -0.0000126 0.0001119 2624 17.66 0.74 1.17 2020-12-09 23:51:23.468755007 INFO 2024-04-09 23:09:36,140Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.372 0.0000456 -0.0000197 822 5.53 -0.42 -0.66 2020-12-09 23:56:55.696883917 INFO 2024-04-09 23:09:36,143Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.367 0.0000797 0.0000099 820 5.52 0.21 0.33 2020-12-10 00:02:27.045964003 INFO 2024-04-09 23:09:36,146Z lrauvNc4ToNetcdf.py nudge_coords():871 20: - - - 324 2.18 - - INFO 2024-04-09 23:09:36,146Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 37527 INFO 2024-04-09 23:09:36,172Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T185102/20201210T010438/data.csv INFO 2024-04-09 23:09:36,271Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:36,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:36,889Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:37,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201209T195102/202012091951_202012100004_2S_scieng.nc INFO 2024-04-09 23:09:37,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012091951_202012100004.nc4 INFO 2024-04-09 23:09:37,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T000438/202012100004_202012100101.nc4 file... INFO 2024-04-09 23:09:37,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100004_202012100101.nc4 INFO 2024-04-09 23:09:38,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T000438/202012100004_202012100101.nc4 INFO 2024-04-09 23:09:38,288Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,351Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,412Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,474Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,533Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,592Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,652Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,712Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,772Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,832Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,902Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:38,962Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,020Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,079Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,138Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,197Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 WARNING 2024-04-09 23:09:39,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [3740] WARNING 2024-04-09 23:09:39,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [3740] INFO 2024-04-09 23:09:39,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:39,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:39,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:39,255Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:39,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:39,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:39,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:39,278Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:39,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:39,293Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:39,301Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:39,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:39,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:39,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:39,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:39,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:39,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:39,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:39,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:39,343Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:39,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:39,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:39,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:39,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:39,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:39,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:39,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:39,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:39,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:39,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:39,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:39,404Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:39,417Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:39,431Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:39,470Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,516Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:39,535Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,581Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:39,601Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 35 v_t values found before 2020-12-10 00:04:00 and after 2020-12-10 01:01:00 INFO 2024-04-09 23:09:39,647Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:39,648Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T000438/202012100004_202012100101.nc4 INFO 2024-04-09 23:09:39,752Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8371 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:39,845Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T000438/202012100004_202012100101.nc4 INFO 2024-04-09 23:09:39,845Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:39,846Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2478 16.68 - - - INFO 2024-04-09 23:09:39,847Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.372 0.0001226 0.0000244 994 6.81 0.42 0.66 2020-12-10 00:28:09.168765068 INFO 2024-04-09 23:09:39,849Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.376 0.0001099 0.0000156 834 5.61 0.33 0.52 2020-12-10 00:33:46.327099085 INFO 2024-04-09 23:09:39,851Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.374 0.0002597 -0.0001411 3174 21.38 -0.77 -1.22 2020-12-10 00:55:09.779472113 INFO 2024-04-09 23:09:39,855Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 891 6.06 - - INFO 2024-04-09 23:09:39,855Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8371 INFO 2024-04-09 23:09:39,874Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201209T230439/20201210T020113/data.csv INFO 2024-04-09 23:09:39,971Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:39,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:40,631Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:41,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T000438/202012100004_202012100101_2S_scieng.nc INFO 2024-04-09 23:09:41,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100004_202012100101.nc4 INFO 2024-04-09 23:09:41,361Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T010113/202012100101_202012100127.nc4 file... INFO 2024-04-09 23:09:41,361Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100101_202012100127.nc4 INFO 2024-04-09 23:09:41,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T010113/202012100101_202012100127.nc4 INFO 2024-04-09 23:09:41,826Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:41,886Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:41,943Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,000Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,057Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,113Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,170Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,226Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,283Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,339Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,395Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,451Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,508Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,566Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,628Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,687Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 WARNING 2024-04-09 23:09:42,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [2888] WARNING 2024-04-09 23:09:42,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [2889] WARNING 2024-04-09 23:09:42,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [2888] WARNING 2024-04-09 23:09:42,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [2888] INFO 2024-04-09 23:09:42,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:42,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:42,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:42,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:42,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:42,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:09:42,756Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:09:42,757Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:42,764Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:42,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:42,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:42,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:42,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:42,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:42,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:42,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:42,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:42,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:42,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:42,806Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 51 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:42,818Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:42,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:42,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:42,830Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:42,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:42,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:42,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:42,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:42,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:42,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:42,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:42,856Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:42,864Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:42,873Z lrauvNc4ToNetcdf.py createSeries():299 depth : 52 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:42,908Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 50 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:42,959Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:42,979Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 50 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:43,022Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:43,041Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 50 v_t values found before 2020-12-10 01:01:00 and after 2020-12-10 01:27:00 INFO 2024-04-09 23:09:43,085Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:43,085Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T010113/202012100101_202012100127.nc4 INFO 2024-04-09 23:09:43,184Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 3872 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:43,278Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T010113/202012100101_202012100127.nc4 INFO 2024-04-09 23:09:43,278Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:43,280Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 135 0.90 - - - INFO 2024-04-09 23:09:43,281Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 0.0001652 0.0000635 3106 20.95 0.36 0.56 2020-12-10 01:23:05.961824894 INFO 2024-04-09 23:09:43,283Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 629 4.23 - - INFO 2024-04-09 23:09:43,284Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 3870 INFO 2024-04-09 23:09:43,309Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T000114/20201210T022720/data.csv INFO 2024-04-09 23:09:43,403Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:43,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:43,927Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:44,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T010113/202012100101_202012100127_2S_scieng.nc INFO 2024-04-09 23:09:44,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100101_202012100127.nc4 INFO 2024-04-09 23:09:44,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T012722/202012100127_202012100317.nc4 file... INFO 2024-04-09 23:09:44,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100127_202012100317.nc4 INFO 2024-04-09 23:09:48,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T012722/202012100127_202012100317.nc4 INFO 2024-04-09 23:09:48,058Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,122Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,186Z lrauvNc4ToNetcdf.py createSeries():299 depth : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,248Z lrauvNc4ToNetcdf.py createSeries():299 time : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,308Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,367Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,425Z lrauvNc4ToNetcdf.py createSeries():299 depth : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,484Z lrauvNc4ToNetcdf.py createSeries():299 time : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,542Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,600Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,658Z lrauvNc4ToNetcdf.py createSeries():299 depth : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,717Z lrauvNc4ToNetcdf.py createSeries():299 time : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,776Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,834Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,892Z lrauvNc4ToNetcdf.py createSeries():299 depth : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,951Z lrauvNc4ToNetcdf.py createSeries():299 time : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:48,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:49,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:49,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:49,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:49,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:09:49,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:49,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:49,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:49,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:49,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:49,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:49,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:49,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:49,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:49,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:49,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:49,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:49,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:49,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:49,141Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:49,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:49,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:49,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:49,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:49,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:49,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:49,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:49,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:49,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:49,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:49,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:49,236Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:49,261Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:49,284Z lrauvNc4ToNetcdf.py createSeries():299 depth : 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:49,336Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,393Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:49,415Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,473Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:49,495Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 49 v_t values found before 2020-12-10 01:27:00 and after 2020-12-10 03:17:00 INFO 2024-04-09 23:09:49,552Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:49,553Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T012722/202012100127_202012100317.nc4 INFO 2024-04-09 23:09:49,671Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 15606 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:49,764Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T012722/202012100127_202012100317.nc4 INFO 2024-04-09 23:09:49,765Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:49,766Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:09:49,767Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.381 -0.0007710 0.0004495 4469 30.09 1.74 2.77 2020-12-10 02:01:38.517198085 INFO 2024-04-09 23:09:49,771Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.370 0.0003419 -0.0002034 8989 60.99 -0.39 -0.62 2020-12-10 03:02:38.523430109 INFO 2024-04-09 23:09:49,776Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.374 0.0000621 0.0000283 374 2.72 1.21 1.93 2020-12-10 03:05:22.161140919 INFO 2024-04-09 23:09:49,780Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.389 0.0001365 -0.0000287 1419 9.56 -0.35 -0.56 2020-12-10 03:14:56.053323984 INFO 2024-04-09 23:09:49,783Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 354 2.38 - - INFO 2024-04-09 23:09:49,783Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 15605 INFO 2024-04-09 23:09:49,804Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T002732/20201210T041719/data.csv INFO 2024-04-09 23:09:49,902Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:49,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:50,190Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:50,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T012722/202012100127_202012100317_2S_scieng.nc INFO 2024-04-09 23:09:50,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100127_202012100317.nc4 INFO 2024-04-09 23:09:50,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T031719/202012100317_202012100401.nc4 file... INFO 2024-04-09 23:09:50,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100317_202012100401.nc4 INFO 2024-04-09 23:09:51,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T031719/202012100317_202012100401.nc4 INFO 2024-04-09 23:09:51,362Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,432Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,502Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,571Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,640Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,710Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,779Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,847Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,915Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:51,987Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,056Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,126Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,195Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,264Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,334Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,404Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:52,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:52,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:52,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:52,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:09:52,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:52,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:52,489Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:52,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:52,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:52,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:52,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:52,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:52,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:52,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:52,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:52,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:52,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:52,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:52,559Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:52,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:52,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:52,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:52,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:52,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:52,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:52,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:52,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:52,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:52,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:52,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:09:52,621Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:52,636Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,647Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:52,649Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:52,693Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,746Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:52,771Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,824Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:52,848Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 112 v_t values found before 2020-12-10 03:17:00 and after 2020-12-10 04:01:00 INFO 2024-04-09 23:09:52,901Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:52,902Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T031719/202012100317_202012100401.nc4 INFO 2024-04-09 23:09:53,022Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 6595 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:53,130Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T031719/202012100317_202012100401.nc4 INFO 2024-04-09 23:09:53,130Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:53,131Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 467 3.14 - - - INFO 2024-04-09 23:09:53,133Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 6127 41.26 - - INFO 2024-04-09 23:09:53,133Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 6594 INFO 2024-04-09 23:09:53,155Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T021719/20201210T050144/data.csv INFO 2024-04-09 23:09:53,254Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:53,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:53,608Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:53,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T031719/202012100317_202012100401_2S_scieng.nc INFO 2024-04-09 23:09:53,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100317_202012100401.nc4 INFO 2024-04-09 23:09:54,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T040145/202012100401_202012100446.nc4 file... INFO 2024-04-09 23:09:54,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100401_202012100446.nc4 INFO 2024-04-09 23:09:54,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T040145/202012100401_202012100446.nc4 INFO 2024-04-09 23:09:54,621Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:54,690Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:54,755Z lrauvNc4ToNetcdf.py createSeries():299 depth : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:54,822Z lrauvNc4ToNetcdf.py createSeries():299 time : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:54,888Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:54,952Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,017Z lrauvNc4ToNetcdf.py createSeries():299 depth : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,083Z lrauvNc4ToNetcdf.py createSeries():299 time : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,147Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,210Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,278Z lrauvNc4ToNetcdf.py createSeries():299 depth : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,354Z lrauvNc4ToNetcdf.py createSeries():299 time : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,421Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,487Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,552Z lrauvNc4ToNetcdf.py createSeries():299 depth : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,617Z lrauvNc4ToNetcdf.py createSeries():299 time : 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:55,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:55,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:55,677Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:55,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:09:55,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:09:55,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:09:55,689Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:55,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:55,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:55,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:55,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:55,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:55,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:55,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:55,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:55,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:55,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:55,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:55,749Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:55,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:55,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:55,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:55,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:55,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:55,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:55,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:55,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:55,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:55,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:55,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:55,814Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:55,829Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:55,844Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:55,888Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:55,939Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:55,960Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:56,010Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:56,031Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 123 v_t values found before 2020-12-10 04:01:00 and after 2020-12-10 04:46:00 INFO 2024-04-09 23:09:56,080Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:56,081Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T040145/202012100401_202012100446.nc4 INFO 2024-04-09 23:09:56,189Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 6683 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:56,286Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T040145/202012100401_202012100446.nc4 INFO 2024-04-09 23:09:56,287Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:56,289Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 5909 39.85 - - - INFO 2024-04-09 23:09:56,291Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 773 5.20 - - INFO 2024-04-09 23:09:56,291Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 6682 INFO 2024-04-09 23:09:56,312Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T030145/20201210T054649/data.csv INFO 2024-04-09 23:09:56,406Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:09:56,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:09:56,718Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:09:56,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T040145/202012100401_202012100446_2S_scieng.nc INFO 2024-04-09 23:09:56,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100401_202012100446.nc4 INFO 2024-04-09 23:09:57,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T044649/202012100446_202012100602.nc4 file... INFO 2024-04-09 23:09:57,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100446_202012100602.nc4 INFO 2024-04-09 23:09:58,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T044649/202012100446_202012100602.nc4 INFO 2024-04-09 23:09:58,070Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,138Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,203Z lrauvNc4ToNetcdf.py createSeries():299 depth : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,270Z lrauvNc4ToNetcdf.py createSeries():299 time : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,365Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,454Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,531Z lrauvNc4ToNetcdf.py createSeries():299 depth : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,620Z lrauvNc4ToNetcdf.py createSeries():299 time : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,691Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,762Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,834Z lrauvNc4ToNetcdf.py createSeries():299 depth : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,909Z lrauvNc4ToNetcdf.py createSeries():299 time : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:58,980Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,045Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,117Z lrauvNc4ToNetcdf.py createSeries():299 depth : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,188Z lrauvNc4ToNetcdf.py createSeries():299 time : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:09:59,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:09:59,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:09:59,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:09:59,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:09:59,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:09:59,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:09:59,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:09:59,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:09:59,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:09:59,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:09:59,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:09:59,319Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:09:59,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:09:59,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:09:59,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:09:59,343Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:09:59,347Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:09:59,351Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:09:59,354Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:09:59,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:09:59,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:09:59,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:09:59,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:09:59,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:09:59,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:09:59,420Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:09:59,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:09:59,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:59,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:09:59,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:59,440Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:59,459Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:59,478Z lrauvNc4ToNetcdf.py createSeries():299 depth : 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:09:59,524Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,581Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:59,607Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,664Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:59,692Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 73 v_t values found before 2020-12-10 04:46:00 and after 2020-12-10 06:02:00 INFO 2024-04-09 23:09:59,752Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:09:59,753Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T044649/202012100446_202012100602.nc4 INFO 2024-04-09 23:09:59,886Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11212 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:09:59,984Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T044649/202012100446_202012100602.nc4 INFO 2024-04-09 23:09:59,984Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:09:59,985Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 360 2.42 - - - INFO 2024-04-09 23:09:59,987Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 10851 73.22 - - INFO 2024-04-09 23:09:59,987Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11211 INFO 2024-04-09 23:10:00,019Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T034650/20201210T070229/data.csv INFO 2024-04-09 23:10:00,116Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:00,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:00,480Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:00,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T044649/202012100446_202012100602_2S_scieng.nc INFO 2024-04-09 23:10:00,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100446_202012100602.nc4 INFO 2024-04-09 23:10:01,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T060229/202012100602_202012100713.nc4 file... INFO 2024-04-09 23:10:01,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100602_202012100713.nc4 INFO 2024-04-09 23:10:01,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T060229/202012100602_202012100713.nc4 INFO 2024-04-09 23:10:01,780Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:01,895Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,010Z lrauvNc4ToNetcdf.py createSeries():299 depth : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,117Z lrauvNc4ToNetcdf.py createSeries():299 time : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,228Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,318Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,428Z lrauvNc4ToNetcdf.py createSeries():299 depth : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,540Z lrauvNc4ToNetcdf.py createSeries():299 time : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,648Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,716Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,796Z lrauvNc4ToNetcdf.py createSeries():299 depth : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,893Z lrauvNc4ToNetcdf.py createSeries():299 time : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:02,979Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,064Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,165Z lrauvNc4ToNetcdf.py createSeries():299 depth : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,269Z lrauvNc4ToNetcdf.py createSeries():299 time : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 WARNING 2024-04-09 23:10:03,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [46 47 48 49 50 51 52 53 54] WARNING 2024-04-09 23:10:03,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [46 47 48 49 50 51 52 53 54] WARNING 2024-04-09 23:10:03,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [46 47 48 49 50 51 52 53 54] WARNING 2024-04-09 23:10:03,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [46 47 48 49 50 51 52 53 54] INFO 2024-04-09 23:10:03,343Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:03,351Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:03,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:03,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:03,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:03,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:03,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:03,380Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:03,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:03,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:03,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:03,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:03,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:03,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:03,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:03,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:03,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:03,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:03,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:03,454Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:03,479Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:03,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:03,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:03,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:03,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:03,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:03,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:03,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:03,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:03,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:03,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:03,536Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:03,556Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:03,578Z lrauvNc4ToNetcdf.py createSeries():299 depth : 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:03,633Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,713Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:03,749Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,827Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:03,865Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 145 v_t values found before 2020-12-10 06:02:00 and after 2020-12-10 07:13:00 INFO 2024-04-09 23:10:03,951Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:03,952Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T060229/202012100602_202012100713.nc4 INFO 2024-04-09 23:10:04,140Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10605 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:04,267Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T060229/202012100602_202012100713.nc4 INFO 2024-04-09 23:10:04,267Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:04,269Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2805 18.84 - - - INFO 2024-04-09 23:10:04,269Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.355 0.0000294 -0.0000047 77 0.51 -1.07 -1.68 2020-12-10 06:21:51.005448103 INFO 2024-04-09 23:10:04,272Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 0.0002678 -0.0002249 7384 49.83 -0.53 -0.84 2020-12-10 07:11:41.244793892 INFO 2024-04-09 23:10:04,276Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 338 2.27 - - INFO 2024-04-09 23:10:04,276Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10604 INFO 2024-04-09 23:10:04,311Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T050229/20201210T081358/data.csv INFO 2024-04-09 23:10:04,412Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:04,417Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:04,899Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:05,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T060229/202012100602_202012100713_2S_scieng.nc INFO 2024-04-09 23:10:05,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100602_202012100713.nc4 INFO 2024-04-09 23:10:05,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T071358/202012100713_202012100826.nc4 file... INFO 2024-04-09 23:10:05,758Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100713_202012100826.nc4 INFO 2024-04-09 23:10:06,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T071358/202012100713_202012100826.nc4 INFO 2024-04-09 23:10:06,214Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,314Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,420Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,534Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,652Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,765Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,881Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:06,994Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,107Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,219Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,331Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,442Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,554Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,661Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,777Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:07,890Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 WARNING 2024-04-09 23:10:07,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [601 602] WARNING 2024-04-09 23:10:07,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [601 602] WARNING 2024-04-09 23:10:07,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [601 602] WARNING 2024-04-09 23:10:07,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [601 602] INFO 2024-04-09 23:10:07,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:07,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:10:07,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:10:07,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:10:07,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:07,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:08,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:08,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:08,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:08,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:08,021Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 20 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:08,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:08,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:08,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:08,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:08,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:08,079Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:08,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:08,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:08,091Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:08,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:08,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:08,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:08,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:08,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:08,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:08,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:08,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:08,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:08,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:08,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:08,176Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:08,197Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:08,218Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:08,274Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,361Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:08,401Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,490Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:08,527Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 27 v_t values found before 2020-12-10 07:13:00 and after 2020-12-10 08:26:00 INFO 2024-04-09 23:10:08,614Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:08,615Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T071358/202012100713_202012100826.nc4 INFO 2024-04-09 23:10:08,814Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10711 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:08,903Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T071358/202012100713_202012100826.nc4 INFO 2024-04-09 23:10:08,904Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:10:08,904Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:10:08,938Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T061358/20201210T092610/data.csv INFO 2024-04-09 23:10:09,032Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:09,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:09,543Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:10,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T071358/202012100713_202012100826_2S_scieng.nc INFO 2024-04-09 23:10:10,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100713_202012100826.nc4 INFO 2024-04-09 23:10:11,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T082610/202012100826_202012101726.nc4 file... INFO 2024-04-09 23:10:11,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012100826_202012101726.nc4 INFO 2024-04-09 23:10:11,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T082610/202012100826_202012101726.nc4 INFO 2024-04-09 23:10:11,616Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:11,769Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:11,923Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,081Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,229Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,361Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,489Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,620Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,753Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,863Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:12,993Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,112Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,230Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,365Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,508Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,645Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 WARNING 2024-04-09 23:10:13,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [ 1875 78365 78366 78367 78368 78369 78370 78371 78372 78373 78374 78375 78376 78377 78378 78379 78380] WARNING 2024-04-09 23:10:13,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [ 1875 78365 78366 78367 78368 78369 78370 78371 78372 78373 78374 78375 78376 78377 78378 78379 78380] WARNING 2024-04-09 23:10:13,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [ 1874 78364 78365 78366 78367 78368 78369 78370 78371 78372 78373 78374 78375 78376 78377 78378 78379] WARNING 2024-04-09 23:10:13,755Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [ 1874 78364 78365 78366 78367 78368 78369 78370 78371 78372 78373 78374 78375 78376 78377 78378 78379] INFO 2024-04-09 23:10:13,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:13,777Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:13,784Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:13,790Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:13,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:13,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:13,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:13,821Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:13,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:13,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:13,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:13,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:13,867Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:13,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:13,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:13,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:13,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:13,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:13,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:13,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:13,928Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 106 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:14,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:14,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:14,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:14,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:14,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:14,026Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:14,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:14,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:14,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:14,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:14,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:14,058Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:14,150Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:14,236Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:14,354Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 105 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,482Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:14,529Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 105 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,662Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:14,709Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 105 v_t values found before 2020-12-10 08:26:00 and after 2020-12-10 17:26:00 INFO 2024-04-09 23:10:14,843Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:14,844Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T082610/202012100826_202012101726.nc4 INFO 2024-04-09 23:10:15,101Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 80180 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:15,244Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 33 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T082610/202012100826_202012101726.nc4 INFO 2024-04-09 23:10:15,244Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:15,246Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:10:15,248Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.374 0.0001399 -0.0000140 1410 9.53 -0.17 -0.27 2020-12-10 08:35:43.666971922 INFO 2024-04-09 23:10:15,251Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 0.0000778 -0.0000031 818 5.50 -0.07 -0.11 2020-12-10 08:41:14.215238094 INFO 2024-04-09 23:10:15,254Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.387 0.0000472 0.0000314 191 1.28 2.87 4.53 2020-12-10 08:42:31.487337112 INFO 2024-04-09 23:10:15,256Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.346 0.0000037 -0.0000053 85 0.57 -1.09 -1.72 2020-12-10 08:43:05.964183092 INFO 2024-04-09 23:10:15,259Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.380 -0.0006175 0.0004000 2947 19.84 2.35 3.74 2020-12-10 09:02:56.522725105 INFO 2024-04-09 23:10:15,262Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.368 0.0000284 0.0000001 271 1.93 0.01 0.01 2020-12-10 09:04:52.929656982 INFO 2024-04-09 23:10:15,265Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.409 0.0000298 0.0000230 9071 61.07 0.04 0.07 2020-12-10 10:05:57.677037954 INFO 2024-04-09 23:10:15,271Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.363 0.0000107 -0.0000066 81 0.54 -1.41 -2.25 2020-12-10 10:06:30.502962111 INFO 2024-04-09 23:10:15,274Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.379 -0.0000913 -0.0000001 7272 48.96 -0.00 -0.00 2020-12-10 10:55:28.445142031 INFO 2024-04-09 23:10:15,278Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.363 -0.0000061 -0.0000135 117 0.84 -1.87 -2.98 2020-12-10 10:56:19.198957920 INFO 2024-04-09 23:10:15,282Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.354 0.0002498 -0.0000728 8565 57.66 -0.15 -0.23 2020-12-10 11:53:59.487880945 INFO 2024-04-09 23:10:15,288Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.365 0.0000201 0.0000121 153 1.11 1.26 2.01 2020-12-10 11:55:06.659852028 INFO 2024-04-09 23:10:15,292Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.376 -0.0000744 0.0000370 9075 61.10 0.07 0.11 2020-12-10 12:56:13.102027893 INFO 2024-04-09 23:10:15,297Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.383 0.0000081 0.0000137 89 0.59 2.68 4.27 2020-12-10 12:56:49.178353071 INFO 2024-04-09 23:10:15,300Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.385 0.0000913 -0.0000388 556 3.74 -1.21 -1.92 2020-12-10 13:00:33.863352060 INFO 2024-04-09 23:10:15,303Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.333 -0.0000103 0.0000135 83 0.55 2.83 4.51 2020-12-10 13:01:07.541256905 INFO 2024-04-09 23:10:15,306Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.382 0.0000285 -0.0000208 7263 48.90 -0.05 -0.08 2020-12-10 13:50:01.799184084 INFO 2024-04-09 23:10:15,310Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.340 -0.0000013 0.0000043 78 0.58 0.86 1.37 2020-12-10 13:50:36.917695999 INFO 2024-04-09 23:10:15,314Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.364 -0.0000434 0.0000015 8047 54.18 0.00 0.01 2020-12-10 14:44:48.045624971 INFO 2024-04-09 23:10:15,318Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.360 0.0000164 0.0000084 144 1.02 0.96 1.53 2020-12-10 14:45:49.725653887 INFO 2024-04-09 23:10:15,321Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.389 0.0000634 -0.0000949 7897 53.17 -0.21 -0.33 2020-12-10 15:39:00.103271008 INFO 2024-04-09 23:10:15,325Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.338 0.0000580 0.0000130 220 1.60 0.95 1.51 2020-12-10 15:40:36.348674059 INFO 2024-04-09 23:10:15,329Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.383 -0.0002193 0.0001374 8454 56.92 0.28 0.45 2020-12-10 16:37:31.891257048 INFO 2024-04-09 23:10:15,334Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.336 0.0001099 0.0000004 1010 6.92 0.01 0.01 2020-12-10 16:44:27.348355055 INFO 2024-04-09 23:10:15,338Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.375 0.0000957 0.0000184 833 5.60 0.38 0.61 2020-12-10 16:50:03.990356922 INFO 2024-04-09 23:10:15,341Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.322 0.0000464 0.0000019 826 5.56 0.04 0.06 2020-12-10 16:55:37.936635017 INFO 2024-04-09 23:10:15,344Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.364 0.0000674 0.0000084 826 5.56 0.18 0.28 2020-12-10 17:01:11.678776979 INFO 2024-04-09 23:10:15,348Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.334 0.0000496 0.0000060 314 2.14 0.33 0.52 2020-12-10 17:03:20.700185061 INFO 2024-04-09 23:10:15,351Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.355 0.0000863 0.0000189 849 5.72 0.38 0.61 2020-12-10 17:09:04.350068092 INFO 2024-04-09 23:10:15,354Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.364 0.0000479 0.0000050 844 5.57 0.10 0.16 2020-12-10 17:14:38.861277103 INFO 2024-04-09 23:10:15,358Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.366 0.0001093 0.0000268 781 5.27 0.59 0.94 2020-12-10 17:19:55.312977076 INFO 2024-04-09 23:10:15,361Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.427 0.0000405 -0.0000052 955 6.44 -0.09 -0.15 2020-12-10 17:26:21.828803062 INFO 2024-04-09 23:10:15,364Z lrauvNc4ToNetcdf.py nudge_coords():871 33: - - - 51 0.34 - - INFO 2024-04-09 23:10:15,364Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 80179 INFO 2024-04-09 23:10:15,397Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T072611/20201210T182642/data.csv INFO 2024-04-09 23:10:15,494Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:15,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:16,099Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:16,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T082610/202012100826_202012101726_2S_scieng.nc INFO 2024-04-09 23:10:16,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012100826_202012101726.nc4 INFO 2024-04-09 23:10:16,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T172643/202012101726_202012101837.nc4 file... INFO 2024-04-09 23:10:16,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012101726_202012101837.nc4 INFO 2024-04-09 23:10:17,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T172643/202012101726_202012101837.nc4 INFO 2024-04-09 23:10:17,432Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,505Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,574Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,644Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,721Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,787Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,852Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,917Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:17,983Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,049Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,114Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,181Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,259Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,333Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,400Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,466Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 WARNING 2024-04-09 23:10:18,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from latitude repeated/decreasing values at indices: [7731] WARNING 2024-04-09 23:10:18,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from longitude repeated/decreasing values at indices: [7731] WARNING 2024-04-09 23:10:18,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [7731] WARNING 2024-04-09 23:10:18,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from time repeated/decreasing values at indices: [7731] INFO 2024-04-09 23:10:18,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:18,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:18,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:18,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:18,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:18,545Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:18,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:18,555Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:18,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:18,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:18,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:18,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:18,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:18,590Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:18,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:18,599Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:18,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:18,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:18,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:18,613Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:18,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:18,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:18,646Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:18,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:18,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:18,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:18,666Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:18,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:18,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:18,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:18,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:18,684Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:18,702Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:18,721Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:18,767Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 138 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,820Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:18,854Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 138 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,908Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:18,935Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 138 v_t values found before 2020-12-10 17:26:00 and after 2020-12-10 18:37:00 INFO 2024-04-09 23:10:18,985Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:18,986Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T172643/202012101726_202012101837.nc4 INFO 2024-04-09 23:10:19,098Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10559 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:19,193Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 10 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T172643/202012101726_202012101837.nc4 INFO 2024-04-09 23:10:19,193Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:19,194Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 870 5.85 - - - INFO 2024-04-09 23:10:19,195Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.360 -0.0002726 0.0003669 3410 22.96 1.87 2.96 2020-12-10 17:55:32.685069084 INFO 2024-04-09 23:10:19,198Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.366 -0.0000009 -0.0000059 40 0.26 -2.62 -4.16 2020-12-10 17:55:48.841887951 INFO 2024-04-09 23:10:19,200Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.385 0.0001081 0.0000390 998 6.77 0.67 1.07 2020-12-10 18:02:35.473666906 INFO 2024-04-09 23:10:19,202Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.374 0.0000963 0.0000183 827 5.57 0.38 0.61 2020-12-10 18:08:09.965707064 INFO 2024-04-09 23:10:19,204Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.365 0.0000476 -0.0000004 429 2.90 -0.02 -0.03 2020-12-10 18:11:04.240793943 INFO 2024-04-09 23:10:19,206Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.373 0.0000277 0.0000313 459 3.10 1.18 1.87 2020-12-10 18:14:10.353734016 INFO 2024-04-09 23:10:19,209Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.372 0.0001097 -0.0000019 743 5.00 -0.04 -0.07 2020-12-10 18:19:10.724766970 INFO 2024-04-09 23:10:19,211Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.374 0.0000216 -0.0000051 144 0.96 -0.62 -0.98 2020-12-10 18:20:08.936678886 INFO 2024-04-09 23:10:19,213Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.372 -0.0002748 0.0000169 2158 14.54 0.14 0.22 2020-12-10 18:34:41.740518093 INFO 2024-04-09 23:10:19,216Z lrauvNc4ToNetcdf.py nudge_coords():871 10: - - - 480 3.23 - - INFO 2024-04-09 23:10:19,216Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10558 INFO 2024-04-09 23:10:19,246Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T162643/20201210T193756/data.csv INFO 2024-04-09 23:10:19,341Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:19,347Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:19,849Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:20,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T172643/202012101726_202012101837_2S_scieng.nc INFO 2024-04-09 23:10:20,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012101726_202012101837.nc4 INFO 2024-04-09 23:10:20,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T183756/202012101837_202012101909.nc4 file... INFO 2024-04-09 23:10:20,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012101837_202012101909.nc4 INFO 2024-04-09 23:10:20,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T183756/202012101837_202012101909.nc4 INFO 2024-04-09 23:10:20,976Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,061Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,133Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,210Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,293Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,363Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,422Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,481Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,541Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,600Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,659Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,717Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,775Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,833Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,891Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,951Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:21,996Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:21,999Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:22,000Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:22,004Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:22,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:22,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:10:22,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:10:22,019Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:22,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:22,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:22,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:22,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:22,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:22,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:10:22,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:10:22,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:22,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:22,049Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:22,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:22,052Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:22,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:22,063Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:10:22,065Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:10:22,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:10:22,067Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:10:22,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:10:22,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:22,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:22,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:22,076Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:22,085Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:22,094Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:22,129Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 95 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,173Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:22,200Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 95 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,245Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:22,268Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 95 v_t values found before 2020-12-10 18:37:00 and after 2020-12-10 19:09:00 INFO 2024-04-09 23:10:22,322Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:22,322Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T183756/202012101837_202012101909.nc4 INFO 2024-04-09 23:10:22,436Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 4705 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:22,529Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T183756/202012101837_202012101909.nc4 INFO 2024-04-09 23:10:22,529Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:22,531Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 360 2.42 - - - INFO 2024-04-09 23:10:22,531Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 -0.0006308 -0.0001729 4305 29.00 -0.69 -1.10 2020-12-10 19:09:22.348519087 INFO 2024-04-09 23:10:22,534Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 39 0.26 - - INFO 2024-04-09 23:10:22,534Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 4704 INFO 2024-04-09 23:10:22,554Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T173756/20201210T200938/data.csv INFO 2024-04-09 23:10:22,652Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:22,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:22,976Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:23,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T183756/202012101837_202012101909_2S_scieng.nc INFO 2024-04-09 23:10:23,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012101837_202012101909.nc4 INFO 2024-04-09 23:10:23,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T190938/202012101909_202012101926.nc4 file... INFO 2024-04-09 23:10:23,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012101909_202012101926.nc4 INFO 2024-04-09 23:10:23,955Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T190938/202012101909_202012101926.nc4 INFO 2024-04-09 23:10:23,983Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,040Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,095Z lrauvNc4ToNetcdf.py createSeries():299 depth : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,151Z lrauvNc4ToNetcdf.py createSeries():299 time : 80 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,207Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,263Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,320Z lrauvNc4ToNetcdf.py createSeries():299 depth : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,386Z lrauvNc4ToNetcdf.py createSeries():299 time : 80 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,446Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,502Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,560Z lrauvNc4ToNetcdf.py createSeries():299 depth : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,615Z lrauvNc4ToNetcdf.py createSeries():299 time : 80 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,671Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,728Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,786Z lrauvNc4ToNetcdf.py createSeries():299 depth : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,848Z lrauvNc4ToNetcdf.py createSeries():299 time : 80 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:24,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:24,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:24,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:24,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:24,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:10:24,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:10:24,939Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:24,943Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 71 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:24,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:24,953Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 11 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:24,957Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 44 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:24,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:24,969Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 32 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,973Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:24,975Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 32 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:24,980Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 6 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:24,985Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 6 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:24,989Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 6 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:24,994Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 6 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:24,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:24,998Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,004Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:25,005Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:25,010Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:25,015Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:25,020Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:25,025Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:25,030Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:25,035Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:25,039Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 29 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:25,043Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,046Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:25,047Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:25,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:10:25,053Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:25,060Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:25,067Z lrauvNc4ToNetcdf.py createSeries():299 depth : 79 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,073Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:25,106Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 77 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,164Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:25,190Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 77 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,240Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:25,267Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 77 v_t values found before 2020-12-10 19:09:00 and after 2020-12-10 19:26:00 INFO 2024-04-09 23:10:25,331Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:25,332Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T190938/202012101909_202012101926.nc4 INFO 2024-04-09 23:10:25,477Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 2504 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:25,583Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T190938/202012101909_202012101926.nc4 INFO 2024-04-09 23:10:25,583Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:25,585Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 319 2.14 - - - INFO 2024-04-09 23:10:25,585Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.343 0.0000079 0.0000032 44 0.29 1.28 2.04 2020-12-10 19:12:05.348294020 INFO 2024-04-09 23:10:25,587Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.382 0.0000108 -0.0000013 134 0.91 -0.17 -0.27 2020-12-10 19:13:00.323784113 INFO 2024-04-09 23:10:25,589Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.368 0.0000001 0.0000067 142 0.95 0.81 1.29 2020-12-10 19:13:57.982918978 INFO 2024-04-09 23:10:25,592Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 1864 12.55 - - INFO 2024-04-09 23:10:25,592Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 2503 INFO 2024-04-09 23:10:25,623Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T180938/20201210T202632/data.csv INFO 2024-04-09 23:10:25,722Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:25,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:26,300Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:27,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T190938/202012101909_202012101926_2S_scieng.nc INFO 2024-04-09 23:10:27,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012101909_202012101926.nc4 INFO 2024-04-09 23:10:27,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T193403/202012101934_202012101939.nc4 file... INFO 2024-04-09 23:10:27,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012101934_202012101939.nc4 INFO 2024-04-09 23:10:27,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T193403/202012101934_202012101939.nc4 INFO 2024-04-09 23:10:27,858Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:27,924Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:27,981Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,037Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,096Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,152Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,214Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,297Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,395Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,495Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,570Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,631Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,688Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,743Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,798Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,854Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:28,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:28,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:28,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:28,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:10:28,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:10:28,914Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:28,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:28,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:28,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:28,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:28,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:28,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:10:28,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:10:28,939Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:28,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:28,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:28,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:28,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:28,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:10:28,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:10:28,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:10:28,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:10:28,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:10:28,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:28,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:28,955Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:10:28,957Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:28,962Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:28,968Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:28,973Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:29,002Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:29,045Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:29,065Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:29,107Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:29,129Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 113 v_t values found before 2020-12-10 19:34:00 and after 2020-12-10 19:39:00 INFO 2024-04-09 23:10:29,171Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:29,171Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T193403/202012101934_202012101939.nc4 INFO 2024-04-09 23:10:29,286Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 506 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:29,420Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T193403/202012101934_202012101939.nc4 INFO 2024-04-09 23:10:29,421Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:29,422Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:29,422Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.348 -0.0000077 0.0000035 189 1.27 0.32 0.51 2020-12-10 19:37:37.139662981 INFO 2024-04-09 23:10:29,424Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 316 2.13 - - INFO 2024-04-09 23:10:29,425Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 505 INFO 2024-04-09 23:10:29,449Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T183414/20201210T203945/data.csv INFO 2024-04-09 23:10:29,548Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:29,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:30,020Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:30,693Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T193403/202012101934_202012101939_2S_scieng.nc INFO 2024-04-09 23:10:30,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012101934_202012101939.nc4 INFO 2024-04-09 23:10:31,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T194059/202012101941_202012102102.nc4 file... INFO 2024-04-09 23:10:31,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012101941_202012102102.nc4 INFO 2024-04-09 23:10:34,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T194059/202012101941_202012102102.nc4 INFO 2024-04-09 23:10:34,324Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,403Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,468Z lrauvNc4ToNetcdf.py createSeries():299 depth : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,538Z lrauvNc4ToNetcdf.py createSeries():299 time : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,619Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,688Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,749Z lrauvNc4ToNetcdf.py createSeries():299 depth : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,811Z lrauvNc4ToNetcdf.py createSeries():299 time : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,871Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,936Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:34,995Z lrauvNc4ToNetcdf.py createSeries():299 depth : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,056Z lrauvNc4ToNetcdf.py createSeries():299 time : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,117Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,174Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,233Z lrauvNc4ToNetcdf.py createSeries():299 depth : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,294Z lrauvNc4ToNetcdf.py createSeries():299 time : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:35,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:35,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:35,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:35,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:35,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:35,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:35,378Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:35,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:35,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:35,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:35,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:35,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:35,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:35,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:35,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:35,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:35,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:35,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:35,450Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:35,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:35,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:35,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:35,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:35,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:35,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:35,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:35,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:35,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:35,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:35,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:35,532Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:35,553Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:35,574Z lrauvNc4ToNetcdf.py createSeries():299 depth : 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:35,620Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,671Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:35,697Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,749Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:35,771Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 72 v_t values found before 2020-12-10 19:41:00 and after 2020-12-10 21:02:00 INFO 2024-04-09 23:10:35,822Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:35,823Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T194059/202012101941_202012102102.nc4 INFO 2024-04-09 23:10:35,942Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11642 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:36,030Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T194059/202012101941_202012102102.nc4 INFO 2024-04-09 23:10:36,030Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:36,031Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:36,032Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 -0.0000321 0.0001410 175 1.26 13.06 20.68 2020-12-10 19:44:53.881351948 INFO 2024-04-09 23:10:36,034Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.382 0.0001036 -0.0001007 905 6.09 -1.93 -3.06 2020-12-10 19:50:59.722280979 INFO 2024-04-09 23:10:36,036Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.353 0.0000820 0.0000037 614 4.14 0.11 0.17 2020-12-10 19:55:08.532037973 INFO 2024-04-09 23:10:36,039Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.369 0.0000162 -0.0000037 107 0.72 -0.61 -0.96 2020-12-10 19:55:51.988426924 INFO 2024-04-09 23:10:36,041Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.381 0.0000168 0.0000039 43 0.28 1.62 2.56 2020-12-10 19:56:09.379211903 INFO 2024-04-09 23:10:36,043Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.385 0.0002371 -0.0000485 833 5.61 -1.01 -1.60 2020-12-10 20:01:46.489644051 INFO 2024-04-09 23:10:36,045Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.371 0.0000763 -0.0000042 490 3.31 -0.15 -0.24 2020-12-10 20:05:05.405445099 INFO 2024-04-09 23:10:36,047Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.317 0.0000402 -0.0000013 211 1.43 -0.11 -0.17 2020-12-10 20:06:31.871860027 INFO 2024-04-09 23:10:36,050Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.389 -0.0000622 -0.0003562 4734 31.91 -1.32 -2.07 2020-12-10 20:38:26.871941090 INFO 2024-04-09 23:10:36,053Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.383 0.0003666 -0.0001291 322 2.42 -6.32 -9.90 2020-12-10 20:40:52.309315920 INFO 2024-04-09 23:10:36,055Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.342 -0.0004493 -0.0008659 2070 13.94 -7.36 -11.51 2020-12-10 20:54:48.962973118 INFO 2024-04-09 23:10:36,059Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.353 -0.0001265 -0.0000956 831 5.59 -2.02 -3.17 2020-12-10 21:00:24.790851116 INFO 2024-04-09 23:10:36,061Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 306 2.06 - - INFO 2024-04-09 23:10:36,062Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11641 INFO 2024-04-09 23:10:36,086Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T184110/20201210T220228/data.csv INFO 2024-04-09 23:10:36,190Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:36,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:36,493Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:36,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T194059/202012101941_202012102102_2S_scieng.nc INFO 2024-04-09 23:10:36,626Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012101941_202012102102.nc4 INFO 2024-04-09 23:10:36,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T210229/202012102102_202012102252.nc4 file... INFO 2024-04-09 23:10:36,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012102102_202012102252.nc4 INFO 2024-04-09 23:10:37,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T210229/202012102102_202012102252.nc4 INFO 2024-04-09 23:10:37,441Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,523Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,599Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,677Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,752Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,826Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,898Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:37,974Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,047Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,121Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,193Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,267Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,340Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,421Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,493Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,567Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:38,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:38,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:38,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:38,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:38,649Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:38,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:38,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:38,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:38,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:38,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:38,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:38,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:38,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:10:38,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:10:38,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:38,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:38,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:38,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:38,707Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:38,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:38,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:10:38,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:10:38,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:10:38,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:10:38,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:10:38,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:38,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:38,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:38,746Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:38,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:38,793Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:38,846Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:38,908Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:38,937Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:39,000Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:39,029Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 6 v_t values found before 2020-12-10 21:02:00 and after 2020-12-10 22:52:00 INFO 2024-04-09 23:10:39,091Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:39,092Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T210229/202012102102_202012102252.nc4 INFO 2024-04-09 23:10:39,233Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 16239 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:39,345Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T210229/202012102102_202012102252.nc4 INFO 2024-04-09 23:10:39,346Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:39,347Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 527 3.54 - - - INFO 2024-04-09 23:10:39,348Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.367 0.0005139 -0.0001108 975 6.56 -2.00 -3.13 2020-12-10 21:12:36.223531008 INFO 2024-04-09 23:10:39,351Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.361 0.0004773 -0.0000170 829 5.59 -0.36 -0.56 2020-12-10 21:18:12.087894917 INFO 2024-04-09 23:10:39,353Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.353 0.0001718 -0.0002118 930 6.26 -4.00 -6.27 2020-12-10 21:24:28.238847017 INFO 2024-04-09 23:10:39,355Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.367 -0.0001619 -0.0013069 4862 32.75 -4.69 -7.40 2020-12-10 21:57:13.409454107 INFO 2024-04-09 23:10:39,360Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.379 0.0000522 -0.0000041 306 2.20 -0.22 -0.34 2020-12-10 21:59:25.638163090 INFO 2024-04-09 23:10:39,362Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.369 -0.0001101 -0.0005127 3566 24.01 -2.50 -3.96 2020-12-10 22:23:26.495595932 INFO 2024-04-09 23:10:39,365Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.398 0.0000015 0.0000062 75 0.50 1.46 2.30 2020-12-10 22:23:56.781255960 INFO 2024-04-09 23:10:39,368Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.361 0.0000193 0.0000158 41 0.27 6.91 10.92 2020-12-10 22:24:13.357549906 INFO 2024-04-09 23:10:39,371Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.352 -0.0000459 -0.0000247 838 5.64 -0.51 -0.81 2020-12-10 22:29:52.182163954 INFO 2024-04-09 23:10:39,373Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.375 -0.0000344 0.0000033 830 5.58 0.07 0.11 2020-12-10 22:35:27.597362995 INFO 2024-04-09 23:10:39,376Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.379 -0.0000087 -0.0000240 819 5.51 -0.51 -0.81 2020-12-10 22:40:58.702193022 INFO 2024-04-09 23:10:39,379Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.348 0.0000143 -0.0000072 820 5.52 -0.15 -0.24 2020-12-10 22:46:30.150988102 INFO 2024-04-09 23:10:39,381Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 820 5.52 - - INFO 2024-04-09 23:10:39,382Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 16238 INFO 2024-04-09 23:10:39,419Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T200229/20201210T235202/data.csv INFO 2024-04-09 23:10:39,516Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:39,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:39,744Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:39,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T210229/202012102102_202012102252_2S_scieng.nc INFO 2024-04-09 23:10:39,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012102102_202012102252.nc4 INFO 2024-04-09 23:10:40,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T225202/202012102252_202012110001.nc4 file... INFO 2024-04-09 23:10:40,301Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012102252_202012110001.nc4 INFO 2024-04-09 23:10:40,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T225202/202012102252_202012110001.nc4 INFO 2024-04-09 23:10:40,778Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:40,900Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,027Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,161Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,291Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,385Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,479Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,568Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,646Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,721Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,808Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,889Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:41,962Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,038Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,123Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,215Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:42,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:42,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:42,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:42,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:42,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:42,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:42,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:42,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:42,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:42,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:42,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:42,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:42,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:42,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:42,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:42,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:42,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:42,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:42,386Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:42,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:42,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:42,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:42,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:42,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:42,449Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:42,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:42,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:42,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:42,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:42,474Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:42,477Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:42,494Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:42,512Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:42,560Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,623Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:42,666Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,749Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:42,777Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 16 v_t values found before 2020-12-10 22:52:00 and after 2020-12-11 00:01:00 INFO 2024-04-09 23:10:42,836Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:42,837Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T225202/202012102252_202012110001.nc4 INFO 2024-04-09 23:10:42,967Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10250 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:43,071Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T225202/202012102252_202012110001.nc4 INFO 2024-04-09 23:10:43,071Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:43,072Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 8 0.05 - - - INFO 2024-04-09 23:10:43,073Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.402 0.0023304 -0.0015001 9884 66.57 -2.59 -4.18 2020-12-10 23:58:40.145617008 INFO 2024-04-09 23:10:43,079Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.304 0.0000657 0.0000003 54 0.38 0.10 0.16 2020-12-10 23:59:03.341830015 INFO 2024-04-09 23:10:43,082Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 303 2.04 - - INFO 2024-04-09 23:10:43,082Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10249 INFO 2024-04-09 23:10:43,108Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T215202/20201211T010106/data.csv INFO 2024-04-09 23:10:43,204Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:43,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:43,509Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:43,710Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201210T225202/202012102252_202012110001_2S_scieng.nc INFO 2024-04-09 23:10:43,710Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012102252_202012110001.nc4 INFO 2024-04-09 23:10:44,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T000106/202012110001_202012110342.nc4 file... INFO 2024-04-09 23:10:44,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110001_202012110342.nc4 INFO 2024-04-09 23:10:44,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T000106/202012110001_202012110342.nc4 INFO 2024-04-09 23:10:44,755Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:44,842Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:44,941Z lrauvNc4ToNetcdf.py createSeries():299 depth : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,029Z lrauvNc4ToNetcdf.py createSeries():299 time : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,114Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,194Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,285Z lrauvNc4ToNetcdf.py createSeries():299 depth : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,379Z lrauvNc4ToNetcdf.py createSeries():299 time : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,457Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,543Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,627Z lrauvNc4ToNetcdf.py createSeries():299 depth : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,720Z lrauvNc4ToNetcdf.py createSeries():299 time : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,799Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,879Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:45,962Z lrauvNc4ToNetcdf.py createSeries():299 depth : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,048Z lrauvNc4ToNetcdf.py createSeries():299 time : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 WARNING 2024-04-09 23:10:46,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1219 Dropping from depth repeated/decreasing values at indices: [32654] INFO 2024-04-09 23:10:46,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:46,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:46,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:46,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:46,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:10:46,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:46,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:46,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:46,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:46,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:46,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:46,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:46,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:46,238Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 7 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:46,249Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 7 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:46,260Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 1 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:46,266Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 1 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:46,272Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 1 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:46,278Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 1 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:46,288Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:46,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:46,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:46,356Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:46,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:46,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:46,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:46,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:46,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:46,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:46,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:46,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:46,421Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:46,465Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:46,509Z lrauvNc4ToNetcdf.py createSeries():299 depth : 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:46,590Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,669Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:46,706Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,776Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:46,813Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 20 v_t values found before 2020-12-11 00:01:00 and after 2020-12-11 03:42:00 INFO 2024-04-09 23:10:46,892Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:46,893Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T000106/202012110001_202012110342.nc4 INFO 2024-04-09 23:10:47,080Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 31733 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:47,199Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 25 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T000106/202012110001_202012110342.nc4 INFO 2024-04-09 23:10:47,199Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:47,200Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:47,201Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.319 0.0007673 0.0000300 850 5.72 0.60 0.97 2020-12-11 00:13:10.389055967 INFO 2024-04-09 23:10:47,204Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 0.0004721 -0.0000182 821 5.53 -0.38 -0.61 2020-12-11 00:18:42.436230898 INFO 2024-04-09 23:10:47,206Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.379 0.0005453 0.0000030 820 5.52 0.06 0.10 2020-12-11 00:24:13.781274080 INFO 2024-04-09 23:10:47,208Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.373 0.0010295 0.0002180 838 5.64 4.45 7.16 2020-12-11 00:29:52.567322969 INFO 2024-04-09 23:10:47,211Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.362 0.0012829 0.0002748 2248 15.14 2.10 3.36 2020-12-11 00:45:01.305701971 INFO 2024-04-09 23:10:47,213Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.379 0.0000037 0.0000294 354 2.56 1.33 2.13 2020-12-11 00:47:35.491286993 INFO 2024-04-09 23:10:47,216Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.385 0.0013831 -0.0006307 4932 33.56 -2.17 -3.48 2020-12-11 01:21:09.265594959 INFO 2024-04-09 23:10:47,220Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.352 -0.0000400 0.0000064 133 0.89 0.83 1.34 2020-12-11 01:22:03.064912081 INFO 2024-04-09 23:10:47,224Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.352 0.0001838 -0.0000427 748 5.06 -0.97 -1.57 2020-12-11 01:27:06.901840925 INFO 2024-04-09 23:10:47,227Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.358 0.0000516 0.0000096 107 0.71 1.55 2.49 2020-12-11 01:27:50.134644985 INFO 2024-04-09 23:10:47,229Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.363 0.0001180 -0.0000575 765 5.15 -1.29 -2.07 2020-12-11 01:32:59.353456974 INFO 2024-04-09 23:10:47,232Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.369 -0.0000417 -0.0001238 751 5.06 -2.82 -4.54 2020-12-11 01:38:03.159424067 INFO 2024-04-09 23:10:47,235Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.382 0.0000707 -0.0000346 750 5.06 -0.79 -1.27 2020-12-11 01:43:07.110199928 INFO 2024-04-09 23:10:47,237Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.384 0.0014320 -0.0004501 5363 36.11 -1.45 -2.31 2020-12-11 02:19:14.087583065 INFO 2024-04-09 23:10:47,242Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.367 0.0001022 -0.0000173 819 5.51 -0.36 -0.58 2020-12-11 02:24:45.174371958 INFO 2024-04-09 23:10:47,244Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.300 0.0000823 0.0000195 819 5.51 0.41 0.66 2020-12-11 02:30:16.348468065 INFO 2024-04-09 23:10:47,247Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.390 0.0001342 -0.0000040 925 6.26 -0.07 -0.12 2020-12-11 02:36:32.546333075 INFO 2024-04-09 23:10:47,250Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.354 0.0013765 -0.0014302 5306 35.73 -4.61 -7.42 2020-12-11 03:12:16.699194908 INFO 2024-04-09 23:10:47,254Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.367 0.0000843 -0.0000090 124 0.84 -1.23 -1.98 2020-12-11 03:13:07.425342083 INFO 2024-04-09 23:10:47,257Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.352 0.0002634 -0.0001235 609 4.10 -3.47 -5.59 2020-12-11 03:17:13.707696915 INFO 2024-04-09 23:10:47,260Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.391 0.0003024 -0.0001269 883 5.94 -2.46 -3.96 2020-12-11 03:23:10.517266035 INFO 2024-04-09 23:10:47,263Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.384 0.0001251 -0.0000971 840 5.65 -1.98 -3.18 2020-12-11 03:28:49.938107014 INFO 2024-04-09 23:10:47,265Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.371 -0.0001977 0.0001007 811 5.46 2.12 3.42 2020-12-11 03:34:18.197627068 INFO 2024-04-09 23:10:47,268Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.345 0.0000756 0.0002870 469 3.17 10.42 16.80 2020-12-11 03:37:28.555080891 INFO 2024-04-09 23:10:47,271Z lrauvNc4ToNetcdf.py nudge_coords():871 25: - - - 647 4.65 - - INFO 2024-04-09 23:10:47,271Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 31732 INFO 2024-04-09 23:10:47,301Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201210T230106/20201211T044208/data.csv INFO 2024-04-09 23:10:47,401Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:47,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:47,796Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:48,061Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T000106/202012110001_202012110342_2S_scieng.nc INFO 2024-04-09 23:10:48,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110001_202012110342.nc4 INFO 2024-04-09 23:10:48,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T034408/202012110344_202012110352.nc4 file... INFO 2024-04-09 23:10:48,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110344_202012110352.nc4 INFO 2024-04-09 23:10:48,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T034408/202012110344_202012110352.nc4 INFO 2024-04-09 23:10:48,805Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:48,857Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:48,910Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:48,962Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,015Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,066Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,117Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,170Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,223Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,275Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,329Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,381Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,434Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,485Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,536Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,587Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:49,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:49,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:49,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:49,647Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:49,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:49,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:49,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:49,668Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:49,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:49,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:49,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:49,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:10:49,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:10:49,684Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:49,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:10:49,687Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:49,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:10:49,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:49,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:10:49,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:10:49,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:10:49,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:10:49,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:10:49,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:49,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:10:49,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:10:49,704Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:49,710Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,714Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:49,715Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:49,746Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,786Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:49,804Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,842Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:49,859Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 24 v_t values found before 2020-12-11 03:44:00 and after 2020-12-11 03:52:00 INFO 2024-04-09 23:10:49,896Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:49,897Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T034408/202012110344_202012110352.nc4 INFO 2024-04-09 23:10:49,983Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 297 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:50,070Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T034408/202012110344_202012110352.nc4 INFO 2024-04-09 23:10:50,071Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:50,072Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:50,072Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 296 1.99 - - INFO 2024-04-09 23:10:50,072Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 296 INFO 2024-04-09 23:10:50,090Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T024419/20201211T045209/data.csv INFO 2024-04-09 23:10:50,187Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:50,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:50,456Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:50,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T034408/202012110344_202012110352_2S_scieng.nc INFO 2024-04-09 23:10:50,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110344_202012110352.nc4 INFO 2024-04-09 23:10:51,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T035326/202012110353_202012110453.nc4 file... INFO 2024-04-09 23:10:51,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110353_202012110453.nc4 INFO 2024-04-09 23:10:51,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T035326/202012110353_202012110453.nc4 INFO 2024-04-09 23:10:51,475Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,542Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,632Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,698Z lrauvNc4ToNetcdf.py createSeries():299 time : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,762Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,864Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:51,974Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,082Z lrauvNc4ToNetcdf.py createSeries():299 time : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,156Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,221Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,327Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,441Z lrauvNc4ToNetcdf.py createSeries():299 time : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,546Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,608Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,670Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,732Z lrauvNc4ToNetcdf.py createSeries():299 time : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:52,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:52,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:52,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:52,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:10:52,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:52,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:52,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:52,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:52,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:52,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:52,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:52,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:52,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:52,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:52,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:52,855Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:52,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:52,862Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:52,865Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:52,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:52,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:52,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:52,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:52,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:52,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:52,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:52,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:52,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:52,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:52,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:10:52,915Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:52,931Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:52,945Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:52,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:52,987Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:53,040Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:53,071Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:53,120Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:53,143Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 25 v_t values found before 2020-12-11 03:53:00 and after 2020-12-11 04:53:00 INFO 2024-04-09 23:10:53,191Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:53,192Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T035326/202012110353_202012110453.nc4 INFO 2024-04-09 23:10:53,317Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8059 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:53,419Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 7 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T035326/202012110353_202012110453.nc4 INFO 2024-04-09 23:10:53,419Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:53,420Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:53,421Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.362 0.0002012 -0.0010772 1021 6.87 -17.93 -29.05 2020-12-11 04:05:43.085503101 INFO 2024-04-09 23:10:53,423Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.372 -0.0003385 -0.0009405 849 5.71 -18.81 -30.51 2020-12-11 04:11:26.191246033 INFO 2024-04-09 23:10:53,425Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.391 -0.0003748 -0.0008367 842 5.67 -16.84 -27.36 2020-12-11 04:17:06.621015072 INFO 2024-04-09 23:10:53,427Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.386 -0.0002134 -0.0002415 527 3.56 -7.74 -12.57 2020-12-11 04:20:40.636976004 INFO 2024-04-09 23:10:53,430Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.363 -0.0000155 -0.0001113 96 0.65 -19.61 -31.87 2020-12-11 04:21:19.952383041 INFO 2024-04-09 23:10:53,432Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.366 -0.0010393 -0.0017332 767 5.17 -38.16 -62.09 2020-12-11 04:26:30.717389107 INFO 2024-04-09 23:10:53,434Z lrauvNc4ToNetcdf.py nudge_coords():871 7: - - - 3956 26.64 - - INFO 2024-04-09 23:10:53,435Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8058 INFO 2024-04-09 23:10:53,464Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T025337/20201211T055309/data.csv INFO 2024-04-09 23:10:53,564Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:53,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:54,037Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:54,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T035326/202012110353_202012110453_2S_scieng.nc INFO 2024-04-09 23:10:54,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110353_202012110453.nc4 INFO 2024-04-09 23:10:54,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T045310/202012110453_202012110549.nc4 file... INFO 2024-04-09 23:10:54,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110453_202012110549.nc4 INFO 2024-04-09 23:10:55,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T045310/202012110453_202012110549.nc4 INFO 2024-04-09 23:10:55,336Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,401Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,461Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,524Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,584Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,642Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,700Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,759Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,818Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,890Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:55,958Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,023Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,087Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,147Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,207Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,268Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:56,319Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:56,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:56,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:56,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:10:56,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:56,348Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:56,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:56,356Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:56,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:56,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:56,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:56,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:56,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:56,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:56,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:56,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:56,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:56,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:56,400Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:56,417Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:56,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:56,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:56,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:56,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:56,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:56,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:56,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:56,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:56,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:56,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:56,456Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:56,470Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:56,485Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:56,523Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 6 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,569Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:56,591Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 6 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,638Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:56,660Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 6 v_t values found before 2020-12-11 04:53:00 and after 2020-12-11 05:49:00 INFO 2024-04-09 23:10:56,707Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:10:56,708Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T045310/202012110453_202012110549.nc4 INFO 2024-04-09 23:10:56,816Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 5283 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:10:56,910Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T045310/202012110453_202012110549.nc4 INFO 2024-04-09 23:10:56,911Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:10:56,912Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:10:56,912Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.277 -0.0007201 -0.0011016 758 5.11 -24.70 -39.93 2020-12-11 05:18:28.436976910 INFO 2024-04-09 23:10:56,915Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.375 -0.0000357 -0.0000985 174 1.18 -9.55 -15.45 2020-12-11 05:19:39.697395086 INFO 2024-04-09 23:10:56,917Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.396 -0.0004947 -0.0009470 755 5.11 -21.24 -34.35 2020-12-11 05:24:46.650281906 INFO 2024-04-09 23:10:56,919Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.318 -0.0000003 -0.0000755 121 0.83 -10.39 -16.80 2020-12-11 05:25:37.083024025 INFO 2024-04-09 23:10:56,921Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 3474 23.40 - - INFO 2024-04-09 23:10:56,921Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 5282 INFO 2024-04-09 23:10:56,942Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T035310/20201211T064902/data.csv INFO 2024-04-09 23:10:57,038Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:10:57,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:10:57,480Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:10:57,855Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T045310/202012110453_202012110549_2S_scieng.nc INFO 2024-04-09 23:10:57,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110453_202012110549.nc4 INFO 2024-04-09 23:10:58,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T055025/202012110550_202012110716.nc4 file... INFO 2024-04-09 23:10:58,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110550_202012110716.nc4 INFO 2024-04-09 23:10:58,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T055025/202012110550_202012110716.nc4 INFO 2024-04-09 23:10:58,771Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:58,834Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:58,896Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:58,957Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,017Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,077Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,136Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,194Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,252Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,311Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,371Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,430Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,491Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,550Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,609Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,669Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:10:59,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:10:59,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:10:59,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:10:59,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:10:59,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:10:59,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:10:59,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:10:59,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:10:59,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:10:59,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:10:59,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:10:59,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:10:59,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:10:59,810Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:10:59,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:10:59,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:10:59,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:10:59,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:10:59,830Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:10:59,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:10:59,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:10:59,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:10:59,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:10:59,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:10:59,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:10:59,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:10:59,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:10:59,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:59,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:10:59,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:59,911Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:59,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:59,948Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:10:59,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:10:59,991Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:11:00,063Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:00,091Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:11:00,145Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:00,176Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 13 v_t values found before 2020-12-11 05:50:00 and after 2020-12-11 07:16:00 INFO 2024-04-09 23:11:00,235Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:00,236Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T055025/202012110550_202012110716.nc4 INFO 2024-04-09 23:11:00,389Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 12081 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:00,527Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 9 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T055025/202012110550_202012110716.nc4 INFO 2024-04-09 23:11:00,528Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:00,529Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:11:00,530Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 -0.0000937 -0.0001540 43 0.28 -62.79 -100.90 2020-12-11 05:54:49.463418007 INFO 2024-04-09 23:11:00,532Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.364 0.0000830 0.0002391 421 2.84 9.70 15.59 2020-12-11 05:57:40.379318953 INFO 2024-04-09 23:11:00,535Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.372 -0.0000707 -0.0000404 746 5.14 -0.91 -1.46 2020-12-11 06:02:49.415169954 INFO 2024-04-09 23:11:00,537Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.309 0.0002680 -0.0001813 5308 35.75 -0.59 -0.94 2020-12-11 06:38:34.561338902 INFO 2024-04-09 23:11:00,540Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.389 0.0001364 -0.0000150 164 1.13 -1.53 -2.46 2020-12-11 06:39:42.419487 INFO 2024-04-09 23:11:00,542Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.415 -0.0001009 -0.0000996 3169 21.34 -0.54 -0.86 2020-12-11 07:01:03.175726891 INFO 2024-04-09 23:11:00,545Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.384 0.0000893 -0.0000159 844 5.68 -0.32 -0.52 2020-12-11 07:06:44.340167999 INFO 2024-04-09 23:11:00,548Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.361 0.0001403 0.0000061 820 5.52 0.13 0.21 2020-12-11 07:12:15.714437008 INFO 2024-04-09 23:11:00,551Z lrauvNc4ToNetcdf.py nudge_coords():871 9: - - - 565 3.81 - - INFO 2024-04-09 23:11:00,551Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 12080 INFO 2024-04-09 23:11:00,589Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T045036/20201211T081604/data.csv INFO 2024-04-09 23:11:00,703Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:00,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:01,336Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:01,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T055025/202012110550_202012110716_2S_scieng.nc INFO 2024-04-09 23:11:01,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110550_202012110716.nc4 INFO 2024-04-09 23:11:02,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T071605/202012110716_202012110841.nc4 file... INFO 2024-04-09 23:11:02,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110716_202012110841.nc4 INFO 2024-04-09 23:11:02,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T071605/202012110716_202012110841.nc4 INFO 2024-04-09 23:11:02,800Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:02,866Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:02,932Z lrauvNc4ToNetcdf.py createSeries():299 depth : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,004Z lrauvNc4ToNetcdf.py createSeries():299 time : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,092Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,155Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,218Z lrauvNc4ToNetcdf.py createSeries():299 depth : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,281Z lrauvNc4ToNetcdf.py createSeries():299 time : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,346Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,412Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,488Z lrauvNc4ToNetcdf.py createSeries():299 depth : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,554Z lrauvNc4ToNetcdf.py createSeries():299 time : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,620Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,682Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,744Z lrauvNc4ToNetcdf.py createSeries():299 depth : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,825Z lrauvNc4ToNetcdf.py createSeries():299 time : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:03,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:11:03,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:11:03,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:11:03,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:11:03,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:11:03,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:11:03,909Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:03,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:03,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:03,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:11:03,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:03,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:03,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:11:03,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:11:03,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:11:03,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:11:03,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:11:03,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:11:03,964Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:03,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:11:03,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:11:03,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:11:03,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:11:04,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:11:04,007Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:11:04,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:11:04,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:11:04,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:11:04,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:04,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:04,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:04,034Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:04,053Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:04,072Z lrauvNc4ToNetcdf.py createSeries():299 depth : 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:04,116Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,167Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:04,203Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,256Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:04,285Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 138 v_t values found before 2020-12-11 07:16:00 and after 2020-12-11 08:41:00 INFO 2024-04-09 23:11:04,339Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:04,339Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T071605/202012110716_202012110841.nc4 INFO 2024-04-09 23:11:04,485Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 12725 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:04,645Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T071605/202012110716_202012110841.nc4 INFO 2024-04-09 23:11:04,645Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:04,646Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 272 1.83 - - - INFO 2024-04-09 23:11:04,647Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.371 0.0003828 -0.0001511 3532 23.80 -0.74 -1.18 2020-12-11 07:41:42.989101887 INFO 2024-04-09 23:11:04,650Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.344 0.0001980 0.0000154 1553 10.46 0.17 0.27 2020-12-11 07:52:10.924621105 INFO 2024-04-09 23:11:04,654Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.378 0.0000924 0.0000144 840 5.65 0.30 0.47 2020-12-11 07:57:50.586345911 INFO 2024-04-09 23:11:04,656Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.355 0.0000117 0.0000265 316 2.13 1.45 2.31 2020-12-11 07:59:58.629616976 INFO 2024-04-09 23:11:04,658Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.356 0.0000348 -0.0000179 164 1.11 -1.88 -2.99 2020-12-11 08:01:05.619565964 INFO 2024-04-09 23:11:04,661Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.368 0.0000335 0.0000020 156 1.05 0.22 0.36 2020-12-11 08:02:08.737946033 INFO 2024-04-09 23:11:04,663Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.375 0.0002576 -0.0000241 797 5.37 -0.52 -0.83 2020-12-11 08:07:31.429136992 INFO 2024-04-09 23:11:04,665Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.370 0.0000354 -0.0000197 258 1.76 -1.30 -2.07 2020-12-11 08:09:17.722235918 INFO 2024-04-09 23:11:04,667Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.385 0.0000236 -0.0000068 154 1.04 -0.76 -1.21 2020-12-11 08:10:20.441984892 INFO 2024-04-09 23:11:04,669Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.370 0.0000409 -0.0000093 451 3.04 -0.36 -0.57 2020-12-11 08:13:23.078073978 INFO 2024-04-09 23:11:04,672Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 4231 28.53 - - INFO 2024-04-09 23:11:04,673Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 12724 INFO 2024-04-09 23:11:04,705Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T061605/20201211T094155/data.csv INFO 2024-04-09 23:11:04,800Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:04,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:05,423Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:05,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T071605/202012110716_202012110841_2S_scieng.nc INFO 2024-04-09 23:11:05,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110716_202012110841.nc4 INFO 2024-04-09 23:11:07,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T084157/202012110842_202012111949.nc4 file... INFO 2024-04-09 23:11:07,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012110842_202012111949.nc4 INFO 2024-04-09 23:11:07,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T084157/202012110842_202012111949.nc4 INFO 2024-04-09 23:11:07,532Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:07,659Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:07,786Z lrauvNc4ToNetcdf.py createSeries():299 depth : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:07,916Z lrauvNc4ToNetcdf.py createSeries():299 time : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,036Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,136Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,243Z lrauvNc4ToNetcdf.py createSeries():299 depth : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,346Z lrauvNc4ToNetcdf.py createSeries():299 time : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,453Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,562Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,666Z lrauvNc4ToNetcdf.py createSeries():299 depth : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,772Z lrauvNc4ToNetcdf.py createSeries():299 time : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,876Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:08,982Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,084Z lrauvNc4ToNetcdf.py createSeries():299 depth : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,187Z lrauvNc4ToNetcdf.py createSeries():299 time : 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:09,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:11:09,282Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:11:09,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:11:09,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:11:09,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:11:09,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:11:09,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:09,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:09,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:09,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:11:09,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:09,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:09,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:11:09,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:11:09,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:11:09,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:11:09,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:11:09,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:11:09,415Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:11:09,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:11:09,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:11:09,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:11:09,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:11:09,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:11:09,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:11:09,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:11:09,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:11:09,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:09,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:09,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:09,546Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:09,640Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:09,737Z lrauvNc4ToNetcdf.py createSeries():299 depth : 45 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:09,861Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:09,976Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:10,025Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:10,161Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:10,209Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 46 v_t values found before 2020-12-11 08:42:00 and after 2020-12-11 19:49:00 INFO 2024-04-09 23:11:10,333Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:10,334Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T084157/202012110842_202012111949.nc4 INFO 2024-04-09 23:11:10,595Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 98505 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:10,742Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 50 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T084157/202012110842_202012111949.nc4 INFO 2024-04-09 23:11:10,742Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:10,744Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:11:10,745Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.371 0.0000147 -0.0000130 79 0.53 -2.88 -4.58 2020-12-11 08:46:07.841134071 INFO 2024-04-09 23:11:10,748Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.365 0.0000596 0.0000037 462 3.12 0.14 0.22 2020-12-11 08:49:15.471374989 INFO 2024-04-09 23:11:10,751Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.373 0.0000603 -0.0000088 641 4.33 -0.24 -0.38 2020-12-11 08:53:35.379282951 INFO 2024-04-09 23:11:10,754Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.408 0.0000188 -0.0000003 127 0.85 -0.04 -0.07 2020-12-11 08:54:26.749914885 INFO 2024-04-09 23:11:10,757Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.509 0.0000651 -0.0000213 763 5.14 -0.48 -0.77 2020-12-11 08:59:35.541748047 INFO 2024-04-09 23:11:10,760Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.373 0.0000480 -0.0000381 691 4.65 -0.95 -1.52 2020-12-11 09:04:14.894959927 INFO 2024-04-09 23:11:10,763Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.466 0.0000026 0.0000050 12 0.07 7.95 12.64 2020-12-11 09:04:19.729310989 INFO 2024-04-09 23:11:10,766Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.385 -0.0000058 -0.0000024 111 0.74 -0.38 -0.60 2020-12-11 09:05:04.717824936 INFO 2024-04-09 23:11:10,770Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.363 -0.0007806 -0.0002280 18408 123.94 -0.22 -0.34 2020-12-11 11:09:01.679133892 INFO 2024-04-09 23:11:10,776Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.366 -0.0012179 -0.0000874 19162 129.09 -0.08 -0.13 2020-12-11 13:18:07.193950891 INFO 2024-04-09 23:11:10,784Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.383 0.0000736 0.0000383 766 5.15 0.89 1.38 2020-12-11 13:23:16.859688044 INFO 2024-04-09 23:11:10,789Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.369 0.0007322 0.0004699 6800 45.79 1.23 1.90 2020-12-11 14:09:04.928925037 INFO 2024-04-09 23:11:10,795Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.367 0.0000436 0.0000338 415 2.79 1.46 2.25 2020-12-11 14:11:52.651073933 INFO 2024-04-09 23:11:10,799Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.382 0.0000017 0.0000044 8 0.05 11.28 17.36 2020-12-11 14:11:55.869836092 INFO 2024-04-09 23:11:10,804Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.338 0.0000093 -0.0000035 83 0.55 -0.75 -1.16 2020-12-11 14:12:29.526710032 INFO 2024-04-09 23:11:10,809Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.369 0.0003782 0.0001742 7294 49.27 0.43 0.66 2020-12-11 15:01:46.073121071 INFO 2024-04-09 23:11:10,814Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.351 -0.0000191 0.0000068 75 0.50 1.64 2.51 2020-12-11 15:02:16.392683029 INFO 2024-04-09 23:11:10,818Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.393 0.0000022 -0.0000010 54 0.36 -0.35 -0.54 2020-12-11 15:02:38.481745005 INFO 2024-04-09 23:11:10,821Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.378 -0.0000136 -0.0000225 418 2.81 -0.97 -1.49 2020-12-11 15:05:27.445827007 INFO 2024-04-09 23:11:10,824Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.288 -0.0000029 0.0000054 120 0.80 0.81 1.25 2020-12-11 15:06:16.036509037 INFO 2024-04-09 23:11:10,828Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.375 0.0000048 -0.0000069 140 0.94 -0.89 -1.36 2020-12-11 15:07:12.780978918 INFO 2024-04-09 23:11:10,831Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.374 0.0000069 -0.0000425 819 5.51 -0.93 -1.43 2020-12-11 15:12:43.797957897 INFO 2024-04-09 23:11:10,834Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.370 -0.0000138 -0.0000395 820 5.52 -0.87 -1.33 2020-12-11 15:18:15.195041895 INFO 2024-04-09 23:11:10,838Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.376 0.0000116 -0.0000131 837 5.64 -0.28 -0.43 2020-12-11 15:23:54.005103111 INFO 2024-04-09 23:11:10,841Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.371 0.0000025 -0.0000583 838 5.64 -1.25 -1.92 2020-12-11 15:29:32.772960901 INFO 2024-04-09 23:11:10,844Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.361 0.0000710 0.0000285 762 5.13 0.67 1.03 2020-12-11 15:34:40.883212090 INFO 2024-04-09 23:11:10,847Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.388 0.0000089 -0.0000061 194 1.30 -0.57 -0.87 2020-12-11 15:35:59.316843033 INFO 2024-04-09 23:11:10,851Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.322 -0.0000035 0.0000373 348 2.34 1.93 2.96 2020-12-11 15:38:19.974109888 INFO 2024-04-09 23:11:10,854Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.375 0.0000370 -0.0000130 88 0.59 -2.68 -4.10 2020-12-11 15:38:55.621921062 INFO 2024-04-09 23:11:10,858Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.379 0.0001011 0.0001029 9505 63.99 0.20 0.30 2020-12-11 16:42:55.653796911 INFO 2024-04-09 23:11:10,863Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.381 0.0000569 -0.0000145 795 5.38 -0.33 -0.50 2020-12-11 16:48:18.689991951 INFO 2024-04-09 23:11:10,866Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.394 0.0000385 0.0000234 643 4.33 0.66 1.00 2020-12-11 16:52:38.801991940 INFO 2024-04-09 23:11:10,869Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.374 0.0000319 -0.0000097 300 2.01 -0.59 -0.90 2020-12-11 16:54:40.121931076 INFO 2024-04-09 23:11:10,873Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.331 0.0000291 0.0000132 270 1.81 0.88 1.35 2020-12-11 16:56:29.285721064 INFO 2024-04-09 23:11:10,876Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.366 0.0000050 0.0000041 238 1.61 0.31 0.47 2020-12-11 16:58:06.026118994 INFO 2024-04-09 23:11:10,879Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.359 0.0000829 0.0000049 745 5.01 0.12 0.18 2020-12-11 17:03:07.281414986 INFO 2024-04-09 23:11:10,882Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.378 -0.0000141 -0.0001137 5108 34.39 -0.40 -0.61 2020-12-11 17:37:31.137309074 INFO 2024-04-09 23:11:10,888Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.374 0.0000822 0.0000051 1189 8.01 0.08 0.12 2020-12-11 17:45:31.962872028 INFO 2024-04-09 23:11:10,892Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.367 0.0000196 0.0000440 820 5.52 0.97 1.48 2020-12-11 17:51:03.401026964 INFO 2024-04-09 23:11:10,896Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.385 -0.0008386 -0.0007821 5322 35.83 -2.61 -4.04 2020-12-11 18:26:53.815680027 INFO 2024-04-09 23:11:10,900Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.412 0.0000146 0.0000107 123 0.82 1.56 2.41 2020-12-11 18:27:43.508856058 INFO 2024-04-09 23:11:10,903Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.387 0.0000037 -0.0000786 764 5.14 -1.83 -2.83 2020-12-11 18:32:52.661673069 INFO 2024-04-09 23:11:10,906Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.375 0.0000268 0.0000010 76 0.50 0.24 0.37 2020-12-11 18:33:23.373042107 INFO 2024-04-09 23:11:10,909Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.356 -0.0007794 -0.0008776 5323 35.84 -2.89 -4.54 2020-12-11 19:09:13.962126970 INFO 2024-04-09 23:11:10,914Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.370 -0.0000026 0.0000047 75 0.50 1.12 1.76 2020-12-11 19:09:44.242245913 INFO 2024-04-09 23:11:10,917Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.374 -0.0001166 -0.0004038 2333 15.70 -3.03 -4.77 2020-12-11 19:25:26.769845009 INFO 2024-04-09 23:11:10,920Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.376 -0.0000056 0.0000186 74 0.49 4.45 7.01 2020-12-11 19:25:56.664798975 INFO 2024-04-09 23:11:10,924Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.377 0.0000139 0.0000072 41 0.27 3.14 4.94 2020-12-11 19:26:13.230968952 INFO 2024-04-09 23:11:10,927Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.378 0.0000778 -0.0000400 838 5.64 -0.84 -1.31 2020-12-11 19:31:51.989842892 INFO 2024-04-09 23:11:10,930Z lrauvNc4ToNetcdf.py nudge_coords():871 50: - - - 2587 17.42 - - INFO 2024-04-09 23:11:10,930Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 98504 INFO 2024-04-09 23:11:10,966Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T074207/20201211T204918/data.csv INFO 2024-04-09 23:11:11,080Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:11,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:11,852Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:12,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T084157/202012110842_202012111949_2S_scieng.nc INFO 2024-04-09 23:11:12,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012110842_202012111949.nc4 INFO 2024-04-09 23:11:12,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T194926/202012111949_202012112106.nc4 file... INFO 2024-04-09 23:11:12,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012111949_202012112106.nc4 INFO 2024-04-09 23:11:13,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T194926/202012111949_202012112106.nc4 INFO 2024-04-09 23:11:13,441Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,508Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,571Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,631Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,690Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,749Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,807Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,865Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,924Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:13,983Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,041Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,098Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,156Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,214Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,271Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,328Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:14,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:11:14,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:11:14,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:11:14,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:11:14,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:11:14,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:11:14,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:14,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:14,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:14,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:11:14,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:14,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:14,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:11:14,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:11:14,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:11:14,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:11:14,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:11:14,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:11:14,483Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:11:14,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:11:14,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:11:14,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:11:14,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:11:14,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:11:14,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:11:14,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:11:14,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:11:14,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:14,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:14,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:14,565Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:14,580Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:14,594Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:14,634Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,682Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:14,706Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,752Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:14,772Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 84 v_t values found before 2020-12-11 19:49:00 and after 2020-12-11 21:06:00 INFO 2024-04-09 23:11:14,819Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:14,819Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T194926/202012111949_202012112106.nc4 INFO 2024-04-09 23:11:14,922Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11404 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:15,018Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 6 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T194926/202012111949_202012112106.nc4 INFO 2024-04-09 23:11:15,019Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:15,020Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 387 2.60 - - - INFO 2024-04-09 23:11:15,021Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.354 0.0000325 0.0000077 489 3.33 0.27 0.43 2020-12-11 19:55:22.937935114 INFO 2024-04-09 23:11:15,023Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.364 0.0001845 -0.0000324 5067 34.13 -0.11 -0.18 2020-12-11 20:29:30.947536945 INFO 2024-04-09 23:11:15,026Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.371 0.0000133 -0.0000096 81 0.57 -1.97 -3.11 2020-12-11 20:30:05.584321976 INFO 2024-04-09 23:11:15,028Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.348 0.0001492 -0.0000677 4746 31.97 -0.25 -0.39 2020-12-11 21:02:04.060738087 INFO 2024-04-09 23:11:15,030Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.266 0.0000048 -0.0000066 121 0.88 -0.87 -1.39 2020-12-11 21:02:57.031671047 INFO 2024-04-09 23:11:15,032Z lrauvNc4ToNetcdf.py nudge_coords():871 6: - - - 512 3.60 - - INFO 2024-04-09 23:11:15,033Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11403 INFO 2024-04-09 23:11:15,054Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T184926/20201211T220633/data.csv INFO 2024-04-09 23:11:15,153Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:15,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:15,666Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:16,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T194926/202012111949_202012112106_2S_scieng.nc INFO 2024-04-09 23:11:16,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012111949_202012112106.nc4 INFO 2024-04-09 23:11:16,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T210634/202012112106_202012112108.nc4 file... INFO 2024-04-09 23:11:16,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012112106_202012112108.nc4 INFO 2024-04-09 23:11:19,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T210634/202012112106_202012112108.nc4 INFO 2024-04-09 23:11:19,425Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,479Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,532Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,584Z lrauvNc4ToNetcdf.py createSeries():299 time : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,637Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,690Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,743Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,797Z lrauvNc4ToNetcdf.py createSeries():299 time : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,849Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,902Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:19,955Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,011Z lrauvNc4ToNetcdf.py createSeries():299 time : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,085Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,151Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,231Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,286Z lrauvNc4ToNetcdf.py createSeries():299 time : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:20,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:11:20,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:11:20,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:11:20,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable flow_rate empty so skipping INFO 2024-04-09 23:11:20,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:11:20,343Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:11:20,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:20,348Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 33 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:20,354Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 20 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:20,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:11:20,360Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 15 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:20,364Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 33 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:20,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:11:20,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:11:20,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:11:20,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:11:20,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:11:20,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:11:20,378Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:11:20,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:20,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:11:20,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:11:20,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:11:20,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:11:20,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:11:20,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:20,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:20,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:11:20,395Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:20,400Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:20,405Z lrauvNc4ToNetcdf.py createSeries():299 depth : 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:20,433Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,472Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:20,490Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,528Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:20,547Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 34 v_t values found before 2020-12-11 21:06:00 and after 2020-12-11 21:08:00 INFO 2024-04-09 23:11:20,585Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:20,585Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T210634/202012112106_202012112108.nc4 INFO 2024-04-09 23:11:20,677Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 246 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:20,725Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T210634/202012112106_202012112108.nc4 INFO 2024-04-09 23:11:20,726Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:11:20,726Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:11:20,744Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T200634/20201211T220813/data.csv INFO 2024-04-09 23:11:20,850Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:20,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:21,064Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:21,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T210634/202012112106_202012112108_2S_scieng.nc INFO 2024-04-09 23:11:21,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012112106_202012112108.nc4 INFO 2024-04-09 23:11:21,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211022/202012112110_202012112116.nc4 file... INFO 2024-04-09 23:11:21,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012112110_202012112116.nc4 INFO 2024-04-09 23:11:21,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211022/202012112110_202012112116.nc4 INFO 2024-04-09 23:11:21,942Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,006Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,067Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,128Z lrauvNc4ToNetcdf.py createSeries():299 time : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,217Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,277Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,338Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,399Z lrauvNc4ToNetcdf.py createSeries():299 time : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,459Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,520Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,580Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,641Z lrauvNc4ToNetcdf.py createSeries():299 time : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,723Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,784Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,844Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,905Z lrauvNc4ToNetcdf.py createSeries():299 time : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:22,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:11:22,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:11:22,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:11:22,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:11:22,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:11:22,971Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:22,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:22,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:22,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:22,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:11:22,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:22,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:22,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:11:22,995Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:11:22,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:11:22,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:11:22,999Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:11:23,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:11:23,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:23,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:11:23,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:11:23,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:11:23,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:11:23,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:11:23,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:23,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:11:23,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:11:23,014Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:23,020Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:23,025Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:23,058Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 106 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,102Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:23,125Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 106 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,187Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:23,208Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 106 v_t values found before 2020-12-11 21:10:00 and after 2020-12-11 21:16:00 INFO 2024-04-09 23:11:23,251Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:23,252Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211022/202012112110_202012112116.nc4 INFO 2024-04-09 23:11:23,353Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 190 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:23,452Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211022/202012112110_202012112116.nc4 INFO 2024-04-09 23:11:23,452Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:23,453Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:11:23,454Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 189 1.28 - - INFO 2024-04-09 23:11:23,454Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 189 INFO 2024-04-09 23:11:23,474Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T201034/20201211T221643/data.csv INFO 2024-04-09 23:11:23,570Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:23,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:23,754Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:23,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211022/202012112110_202012112116_2S_scieng.nc INFO 2024-04-09 23:11:23,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012112110_202012112116.nc4 INFO 2024-04-09 23:11:24,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211803/202012112118_202012112338.nc4 file... INFO 2024-04-09 23:11:24,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012112118_202012112338.nc4 INFO 2024-04-09 23:11:24,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211803/202012112118_202012112338.nc4 INFO 2024-04-09 23:11:24,924Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,002Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,078Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,166Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,245Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,317Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,389Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,464Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,552Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,622Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,694Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,766Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,838Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:25,928Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,001Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,072Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:11:26,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:11:26,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:11:26,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:11:26,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsUBAT parameter flow_rate renaming to ubat_flow_rate INFO 2024-04-09 23:11:26,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:11:26,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:11:26,178Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:11:26,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:11:26,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:11:26,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:11:26,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:11:26,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:11:26,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:11:26,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:11:26,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:11:26,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:11:26,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:11:26,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:11:26,288Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:11:26,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:11:26,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:11:26,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:11:26,351Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:11:26,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:11:26,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:11:26,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:11:26,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:11:26,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:26,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:11:26,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:26,400Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:26,429Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:26,459Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:11:26,524Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,597Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:26,633Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,698Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:26,726Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 82 v_t values found before 2020-12-11 21:18:00 and after 2020-12-11 23:38:00 INFO 2024-04-09 23:11:26,789Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:11:26,790Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211803/202012112118_202012112338.nc4 INFO 2024-04-09 23:11:26,928Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 20269 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:11:27,048Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 17 longitude_fix and latititude_fix values from /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211803/202012112118_202012112338.nc4 INFO 2024-04-09 23:11:27,048Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:11:27,050Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:11:27,050Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 -0.0000172 0.0000089 83 0.59 1.78 2.82 2020-12-11 21:22:16.604022980 INFO 2024-04-09 23:11:27,053Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0001196 -0.0001615 4524 30.46 -0.62 -0.98 2020-12-11 21:52:44.838598013 INFO 2024-04-09 23:11:27,056Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.366 -0.0000095 0.0000100 120 0.80 1.45 2.30 2020-12-11 21:53:33.336527109 INFO 2024-04-09 23:11:27,058Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.379 -0.0000175 0.0000095 129 0.86 1.28 2.04 2020-12-11 21:54:25.614571095 INFO 2024-04-09 23:11:27,061Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.379 -0.0000127 0.0000173 829 5.58 0.36 0.57 2020-12-11 22:00:00.634419918 INFO 2024-04-09 23:11:27,063Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.377 -0.0000008 0.0000205 188 1.27 1.88 2.98 2020-12-11 22:01:17.452527046 INFO 2024-04-09 23:11:27,066Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.372 0.0000063 0.0000097 84 0.56 2.02 3.21 2020-12-11 22:01:51.429579973 INFO 2024-04-09 23:11:27,069Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.334 0.0000296 0.0000042 217 1.46 0.33 0.53 2020-12-11 22:03:19.627506018 INFO 2024-04-09 23:11:27,072Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.384 0.0000082 0.0000042 419 2.83 0.17 0.28 2020-12-11 22:06:09.596518993 INFO 2024-04-09 23:11:27,075Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.321 0.0000797 0.0003152 5362 36.16 1.02 1.62 2020-12-11 22:42:19.807292938 INFO 2024-04-09 23:11:27,079Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.326 0.0000023 0.0000134 124 0.86 1.82 2.87 2020-12-11 22:43:11.964385986 INFO 2024-04-09 23:11:27,082Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.411 0.0001178 0.0000400 759 5.12 0.92 1.45 2020-12-11 22:48:19.704044104 INFO 2024-04-09 23:11:27,085Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.355 0.0000285 0.0000122 807 5.51 0.26 0.41 2020-12-11 22:53:50.905215979 INFO 2024-04-09 23:11:27,088Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.384 0.0000071 0.0001953 5353 36.06 0.64 1.00 2020-12-11 23:29:54.776129961 INFO 2024-04-09 23:11:27,093Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.359 0.0000334 -0.0000024 126 0.87 -0.32 -0.51 2020-12-11 23:30:47.405699968 INFO 2024-04-09 23:11:27,096Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.388 0.0002539 0.0001926 773 5.23 4.33 6.82 2020-12-11 23:36:01.870362997 INFO 2024-04-09 23:11:27,099Z lrauvNc4ToNetcdf.py nudge_coords():871 17: - - - 371 2.50 - - INFO 2024-04-09 23:11:27,099Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 20268 INFO 2024-04-09 23:11:27,131Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/pontus_ac/between/20201211T201815/20201212T003833/data.csv INFO 2024-04-09 23:11:27,227Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:11:27,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'ubat_flow_rate', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:11:27,557Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:11:27,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/pontus/missionlogs/2020/20201208_20201211/20201211T211803/202012112118_202012112338_2S_scieng.nc INFO 2024-04-09 23:11:27,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012112118_202012112338.nc4 INFO 2024-04-09 23:13:44,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T015738/202007070157_202007070211.nc4 file... INFO 2024-04-09 23:13:44,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007070157_202007070211.nc4 INFO 2024-04-09 23:13:45,263Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T015738/202007070157_202007070211.nc4 INFO 2024-04-09 23:13:45,328Z lrauvNc4ToNetcdf.py createSeries():299 depth : 58 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,388Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,479Z lrauvNc4ToNetcdf.py createSeries():299 depth : 58 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,532Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,626Z lrauvNc4ToNetcdf.py createSeries():299 depth : 58 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,683Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,775Z lrauvNc4ToNetcdf.py createSeries():299 depth : 58 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,828Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:13:45,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:13:45,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:13:45,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:13:45,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:13:45,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:13:45,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:13:45,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:13:45,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:13:45,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:13:45,899Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:13:45,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:13:45,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:13:45,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:13:45,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:13:45,912Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 59 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:45,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:13:45,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:13:45,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:13:45,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:13:45,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:13:45,939Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude empty so skipping INFO 2024-04-09 23:13:45,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude empty so skipping INFO 2024-04-09 23:13:45,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable depth empty so skipping INFO 2024-04-09 23:13:45,966Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 57 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:46,465Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:46,484Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 57 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:46,978Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:46,997Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 57 v_t values found before 2020-07-07 01:57:00 and after 2020-07-07 02:11:00 INFO 2024-04-09 23:13:47,504Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:47,505Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T015738/202007070157_202007070211.nc4 INFO 2024-04-09 23:13:47,555Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 0 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:13:47,602Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T015738/202007070157_202007070211.nc4 INFO 2024-04-09 23:13:47,603Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:13:47,603Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:13:47,620Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T005748/20200707T031123/data.csv INFO 2024-04-09 23:13:47,727Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database ERROR 2024-04-09 23:13:47,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1391 array of sample points is empty ERROR 2024-04-09 23:13:47,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1392 Not creating /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T015738/202007070157_202007070211_2S_scieng.nc INFO 2024-04-09 23:13:48,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T021235/202007070212_202007071618.nc4 file... INFO 2024-04-09 23:13:48,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007070212_202007071618.nc4 INFO 2024-04-09 23:13:48,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T021235/202007070212_202007071618.nc4 INFO 2024-04-09 23:13:48,808Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:48,977Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,127Z lrauvNc4ToNetcdf.py createSeries():299 depth : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,271Z lrauvNc4ToNetcdf.py createSeries():299 time : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,401Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,517Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,633Z lrauvNc4ToNetcdf.py createSeries():299 depth : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,750Z lrauvNc4ToNetcdf.py createSeries():299 time : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,865Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:49,985Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,107Z lrauvNc4ToNetcdf.py createSeries():299 depth : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,223Z lrauvNc4ToNetcdf.py createSeries():299 time : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,339Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,458Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,578Z lrauvNc4ToNetcdf.py createSeries():299 depth : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,693Z lrauvNc4ToNetcdf.py createSeries():299 time : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:13:50,792Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:13:50,799Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:13:50,805Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:50,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:13:50,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:13:50,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:13:50,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:13:50,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:13:50,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:13:51,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:13:51,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:13:51,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:13:51,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:13:51,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:13:51,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:13:51,147Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:51,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:13:51,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:13:51,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:13:51,248Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:51,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:13:51,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:51,276Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:51,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:51,390Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:51,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:51,504Z lrauvNc4ToNetcdf.py createSeries():299 depth : 90 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:51,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:51,642Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 89 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:52,500Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:52,551Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 89 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:53,427Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:53,474Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 89 v_t values found before 2020-07-07 02:12:00 and after 2020-07-07 16:18:00 INFO 2024-04-09 23:13:54,342Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:54,343Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T021235/202007070212_202007071618.nc4 INFO 2024-04-09 23:13:54,585Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 122996 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:13:54,678Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 26 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T021235/202007070212_202007071618.nc4 INFO 2024-04-09 23:13:54,679Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:13:54,681Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:13:54,682Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.397 0.0002002 -0.0000500 176 1.18 -4.79 -7.86 2020-07-07 02:29:12.733011961 INFO 2024-04-09 23:13:54,686Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.353 0.0023146 -0.0004784 8177 55.06 -0.98 -1.61 2020-07-07 03:24:16.606307983 INFO 2024-04-09 23:13:54,691Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.368 0.0047667 0.0002075 10750 72.38 0.33 0.53 2020-07-07 04:36:39.740179062 INFO 2024-04-09 23:13:54,696Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.382 0.0000667 -0.0002055 586 4.25 -5.57 -8.95 2020-07-07 04:40:55.297210932 INFO 2024-04-09 23:13:54,700Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.357 0.0062225 0.0000309 10151 68.35 0.05 0.08 2020-07-07 05:49:16.615907907 INFO 2024-04-09 23:13:54,705Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.394 -0.0000622 0.0000870 72 0.48 20.93 33.71 2020-07-07 05:49:45.685200930 INFO 2024-04-09 23:13:54,709Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.389 0.0029148 0.0012336 9793 65.94 2.16 3.47 2020-07-07 06:55:42.280740976 INFO 2024-04-09 23:13:54,715Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.403 -0.0001502 0.0000592 180 1.35 5.07 8.14 2020-07-07 06:57:03.528825997 INFO 2024-04-09 23:13:54,719Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.375 0.0018999 0.0012667 10156 68.38 2.19 3.43 2020-07-07 08:05:26.749003887 INFO 2024-04-09 23:13:54,726Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.304 0.0000497 -0.0000323 164 1.24 -3.07 -4.82 2020-07-07 08:06:41.690968037 INFO 2024-04-09 23:13:54,729Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.366 -0.0003789 0.0004758 9379 63.15 0.91 1.40 2020-07-07 09:09:50.909351110 INFO 2024-04-09 23:13:54,735Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.400 0.0001284 0.0003239 336 2.46 15.83 24.37 2020-07-07 09:12:19.031069994 INFO 2024-04-09 23:13:54,739Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.375 0.0005076 0.0006400 9370 63.09 1.22 1.88 2020-07-07 10:15:24.752084970 INFO 2024-04-09 23:13:54,744Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.408 -0.0002852 0.0002689 359 2.61 12.38 19.07 2020-07-07 10:18:01.875688076 INFO 2024-04-09 23:13:54,749Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.371 0.0001587 0.0006308 9110 61.34 1.24 1.91 2020-07-07 11:19:22.617199898 INFO 2024-04-09 23:13:54,755Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.362 0.0000295 0.0002133 424 2.99 8.56 13.20 2020-07-07 11:22:22.579543114 INFO 2024-04-09 23:13:54,759Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 -0.0008260 0.0003593 10181 68.55 0.63 0.97 2020-07-07 12:30:55.838035107 INFO 2024-04-09 23:13:54,766Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.375 0.0004726 -0.0001151 290 2.15 -6.45 -9.94 2020-07-07 12:33:04.960282087 INFO 2024-04-09 23:13:54,770Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.370 -0.0006737 -0.0002744 10529 70.89 -0.47 -0.72 2020-07-07 13:43:58.846236944 INFO 2024-04-09 23:13:54,776Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.373 0.0000521 -0.0000042 143 1.04 -0.48 -0.74 2020-07-07 13:45:01.886042118 INFO 2024-04-09 23:13:54,780Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.377 0.0010949 0.0002569 10254 69.04 0.45 0.69 2020-07-07 14:54:04.748004913 INFO 2024-04-09 23:13:54,786Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.358 -0.0000262 0.0000798 289 2.11 4.52 6.99 2020-07-07 14:56:12.026483059 INFO 2024-04-09 23:13:54,790Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.396 0.0008622 -0.0002343 10355 70.43 -0.40 -0.62 2020-07-07 16:06:38.424926043 INFO 2024-04-09 23:13:54,796Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.383 0.0008000 -0.0000810 891 6.02 -1.62 -2.49 2020-07-07 16:12:40.104721069 INFO 2024-04-09 23:13:54,800Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.385 0.0002337 -0.0000841 819 5.51 -1.84 -2.83 2020-07-07 16:18:10.989005089 INFO 2024-04-09 23:13:54,804Z lrauvNc4ToNetcdf.py nudge_coords():871 26: - - - 61 0.40 - - INFO 2024-04-09 23:13:54,804Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 122995 INFO 2024-04-09 23:13:54,831Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T011246/20200707T171836/data.csv INFO 2024-04-09 23:13:54,931Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:13:54,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:13:55,539Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:13:56,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T021235/202007070212_202007071618_2S_scieng.nc INFO 2024-04-09 23:13:56,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007070212_202007071618.nc4 INFO 2024-04-09 23:13:56,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T161838/202007071618_202007071833.nc4 file... INFO 2024-04-09 23:13:56,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007071618_202007071833.nc4 INFO 2024-04-09 23:13:56,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T161838/202007071618_202007071833.nc4 INFO 2024-04-09 23:13:57,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:13:57,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:13:57,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:13:57,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:13:57,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:13:57,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:13:57,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:13:57,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:13:57,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:13:57,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:13:57,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:13:57,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:13:58,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:13:58,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:13:58,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:13:58,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:13:58,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:13:58,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:13:58,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:13:58,054Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:58,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:58,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:58,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:13:58,203Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:58,276Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:58,346Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:13:58,347Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T161838/202007071618_202007071833.nc4 INFO 2024-04-09 23:13:58,506Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 19485 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:13:58,631Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T161838/202007071618_202007071833.nc4 INFO 2024-04-09 23:13:58,631Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:13:58,632Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:13:58,633Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.362 0.0000263 -0.0000036 41 0.27 -1.62 -2.49 2020-07-07 16:20:43.188442945 INFO 2024-04-09 23:13:58,635Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.348 -0.0000356 0.0000544 172 1.27 5.19 7.96 2020-07-07 16:21:59.617794991 INFO 2024-04-09 23:13:58,637Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.365 0.0009322 0.0000994 1322 9.33 1.29 1.97 2020-07-07 16:31:19.637430906 INFO 2024-04-09 23:13:58,639Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.386 0.0003139 -0.0000353 427 3.08 -1.39 -2.12 2020-07-07 16:34:24.643850088 INFO 2024-04-09 23:13:58,641Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.387 0.0001188 -0.0001141 250 1.82 -7.59 -11.62 2020-07-07 16:36:14.165231943 INFO 2024-04-09 23:13:58,644Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.375 0.0005117 -0.0003562 3950 26.63 -1.62 -2.48 2020-07-07 17:02:52.625135899 INFO 2024-04-09 23:13:58,646Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.349 -0.0000859 -0.0002828 1018 7.10 -4.82 -7.38 2020-07-07 17:09:59.227554083 INFO 2024-04-09 23:13:58,648Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.385 0.0002985 -0.0000841 881 6.01 -1.69 -2.59 2020-07-07 17:16:00.257950067 INFO 2024-04-09 23:13:58,650Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.366 -0.0000086 0.0000137 203 1.36 1.22 1.87 2020-07-07 17:17:22.330116034 INFO 2024-04-09 23:13:58,652Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.376 0.0000555 -0.0000190 176 1.18 -1.95 -2.99 2020-07-07 17:18:33.593106031 INFO 2024-04-09 23:13:58,655Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.371 0.0002578 -0.0001203 5164 34.77 -0.41 -0.64 2020-07-07 17:53:19.989269018 INFO 2024-04-09 23:13:58,657Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.352 0.0000668 0.0000027 76 0.51 0.64 0.99 2020-07-07 17:53:50.776482105 INFO 2024-04-09 23:13:58,660Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 5804 39.08 - - INFO 2024-04-09 23:13:58,660Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 19484 INFO 2024-04-09 23:13:58,695Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T151849/20200707T193256/data.csv INFO 2024-04-09 23:13:58,791Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:13:58,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:13:59,301Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:13:59,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T161838/202007071618_202007071833_2S_scieng.nc INFO 2024-04-09 23:13:59,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007071618_202007071833.nc4 INFO 2024-04-09 23:14:00,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T183316/202007071833_202007071929.nc4 file... INFO 2024-04-09 23:14:00,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007071833_202007071929.nc4 INFO 2024-04-09 23:14:00,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T183316/202007071833_202007071929.nc4 INFO 2024-04-09 23:14:00,614Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,675Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,734Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,793Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,851Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,909Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:00,971Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,030Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,097Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,165Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,232Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,307Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,367Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,424Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,488Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,575Z lrauvNc4ToNetcdf.py createSeries():299 time : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:01,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:01,626Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:01,630Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:01,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:01,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:01,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:01,647Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:01,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:01,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:01,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:01,673Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:01,677Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:01,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:01,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:01,686Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:01,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:01,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:01,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:01,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:01,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:01,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:01,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:14:01,753Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:14:01,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:01,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:01,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:01,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:01,779Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:01,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:01,786Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:01,798Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:01,810Z lrauvNc4ToNetcdf.py createSeries():299 depth : 139 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:01,847Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 137 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,891Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:01,916Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 137 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:01,962Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:01,988Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 137 v_t values found before 2020-07-07 18:33:00 and after 2020-07-07 19:29:00 INFO 2024-04-09 23:14:02,033Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:02,033Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T183316/202007071833_202007071929.nc4 INFO 2024-04-09 23:14:02,136Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 7874 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:02,228Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 6 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T183316/202007071833_202007071929.nc4 INFO 2024-04-09 23:14:02,228Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:02,229Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:02,230Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.350 0.0003313 0.0003502 186 1.37 30.02 47.39 2020-07-07 18:37:30.897614002 INFO 2024-04-09 23:14:02,232Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.385 0.0021306 -0.0000392 679 4.90 -0.94 -1.48 2020-07-07 18:42:25.188278913 INFO 2024-04-09 23:14:02,234Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.344 0.0003615 -0.0000958 202 1.35 -8.30 -13.11 2020-07-07 18:43:46.856987953 INFO 2024-04-09 23:14:02,237Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.381 0.0010835 -0.0001682 5892 39.67 -0.49 -0.79 2020-07-07 19:23:27.383094072 INFO 2024-04-09 23:14:02,239Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.365 0.0004595 -0.0003407 456 3.32 -11.80 -18.99 2020-07-07 19:26:47.276194096 INFO 2024-04-09 23:14:02,242Z lrauvNc4ToNetcdf.py nudge_coords():871 6: - - - 458 3.13 - - INFO 2024-04-09 23:14:02,242Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 7873 INFO 2024-04-09 23:14:02,267Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T173327/20200707T202956/data.csv INFO 2024-04-09 23:14:02,365Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:02,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:03,096Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:04,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T183316/202007071833_202007071929_2S_scieng.nc INFO 2024-04-09 23:14:04,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007071833_202007071929.nc4 INFO 2024-04-09 23:14:04,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T192957/202007071930_202007071942.nc4 file... INFO 2024-04-09 23:14:04,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007071930_202007071942.nc4 INFO 2024-04-09 23:14:08,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T192957/202007071930_202007071942.nc4 INFO 2024-04-09 23:14:08,275Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,361Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,450Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,560Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,662Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,759Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,850Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:08,930Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,006Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,083Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,162Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,238Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,313Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,387Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,467Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,562Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:09,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:09,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:09,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:09,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:09,644Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:09,648Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:09,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:09,655Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:09,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:14:09,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:14:09,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:09,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:09,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:09,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:09,666Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:09,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:09,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:09,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:09,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:09,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:09,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:09,693Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:09,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:09,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:09,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:09,720Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:09,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:14:09,726Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:09,733Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:09,741Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:09,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:09,791Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 80 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:10,906Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:10,939Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 80 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:11,942Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:11,974Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 80 v_t values found before 2020-07-07 19:30:00 and after 2020-07-07 19:42:00 INFO 2024-04-09 23:14:12,997Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:12,997Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T192957/202007071930_202007071942.nc4 INFO 2024-04-09 23:14:13,131Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1279 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:13,265Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T192957/202007071930_202007071942.nc4 INFO 2024-04-09 23:14:13,266Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:13,266Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:13,267Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.358 0.0000210 -0.0000188 37 0.24 -8.95 -14.42 2020-07-07 19:34:12.169354916 INFO 2024-04-09 23:14:13,270Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.375 0.0003865 -0.0005927 865 5.82 -11.71 -18.87 2020-07-07 19:40:01.700083017 INFO 2024-04-09 23:14:13,272Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 376 2.53 - - INFO 2024-04-09 23:14:13,272Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1278 INFO 2024-04-09 23:14:13,313Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T183008/20200707T204233/data.csv INFO 2024-04-09 23:14:13,426Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:13,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:13,650Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:13,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T192957/202007071930_202007071942_2S_scieng.nc INFO 2024-04-09 23:14:13,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007071930_202007071942.nc4 INFO 2024-04-09 23:14:14,095Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T194435/202007071944_202007071956.nc4 file... INFO 2024-04-09 23:14:14,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007071944_202007071956.nc4 INFO 2024-04-09 23:14:14,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T194435/202007071944_202007071956.nc4 INFO 2024-04-09 23:14:14,653Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:14,739Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:14,880Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:14,951Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,065Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,135Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,257Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,327Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,375Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:15,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:14:15,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:14:15,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:14:15,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:15,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:15,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:15,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:15,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:15,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:14:15,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:14:15,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:15,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:15,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:15,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:15,413Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 106 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:15,419Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:15,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:15,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:15,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:15,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:15,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:15,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:15,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:15,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:15,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:15,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:15,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:15,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:14:15,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude empty so skipping INFO 2024-04-09 23:14:15,474Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude empty so skipping INFO 2024-04-09 23:14:15,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable depth empty so skipping INFO 2024-04-09 23:14:15,507Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 104 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:16,600Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:16,623Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 104 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:17,744Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:17,776Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 104 v_t values found before 2020-07-07 19:44:00 and after 2020-07-07 19:56:00 INFO 2024-04-09 23:14:18,923Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:18,924Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T194435/202007071944_202007071956.nc4 INFO 2024-04-09 23:14:18,984Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 0 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:19,042Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T194435/202007071944_202007071956.nc4 INFO 2024-04-09 23:14:19,043Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:14:19,043Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:14:19,066Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T184447/20200707T205642/data.csv INFO 2024-04-09 23:14:19,166Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database ERROR 2024-04-09 23:14:19,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1391 array of sample points is empty ERROR 2024-04-09 23:14:19,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1392 Not creating /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T194435/202007071944_202007071956_2S_scieng.nc INFO 2024-04-09 23:14:19,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T195737/202007071957_202007072105.nc4 file... INFO 2024-04-09 23:14:19,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007071957_202007072105.nc4 INFO 2024-04-09 23:14:20,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T195737/202007071957_202007072105.nc4 INFO 2024-04-09 23:14:21,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:21,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:21,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:21,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:21,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:21,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:21,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:21,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:21,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:21,653Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 33 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:21,661Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 33 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:21,668Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 5 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:21,674Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 5 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:21,679Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 5 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:21,684Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 5 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:21,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:21,706Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 67 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,716Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:21,718Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:21,730Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:21,741Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,751Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:21,753Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:21,765Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:21,777Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:14:21,786Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 68 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:14:21,796Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:21,801Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-07-07 19:57:00 and after 2020-07-07 21:05:00 INFO 2024-04-09 23:14:21,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:21,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:21,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:21,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:21,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:14:21,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:21,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:21,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:21,995Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:22,106Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:22,197Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:22,198Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T195737/202007071957_202007072105.nc4 INFO 2024-04-09 23:14:22,386Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 6233 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:22,551Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T195737/202007071957_202007072105.nc4 INFO 2024-04-09 23:14:22,552Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:22,553Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:22,554Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.338 0.0002760 -0.0004610 468 3.15 -16.70 -27.12 2020-07-07 20:25:52.837168932 INFO 2024-04-09 23:14:22,556Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.364 -0.0004805 -0.0002369 750 5.04 -5.36 -8.70 2020-07-07 20:30:55.844779968 INFO 2024-04-09 23:14:22,559Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 5014 33.76 - - INFO 2024-04-09 23:14:22,559Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 6232 INFO 2024-04-09 23:14:22,612Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T185749/20200707T220441/data.csv INFO 2024-04-09 23:14:22,711Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:22,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:23,025Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:23,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T195737/202007071957_202007072105_2S_scieng.nc INFO 2024-04-09 23:14:23,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007071957_202007072105.nc4 INFO 2024-04-09 23:14:23,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T210638/202007072106_202007072118.nc4 file... INFO 2024-04-09 23:14:23,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007072106_202007072118.nc4 INFO 2024-04-09 23:14:23,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T210638/202007072106_202007072118.nc4 INFO 2024-04-09 23:14:23,894Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:23,962Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,028Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,087Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,146Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,203Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,271Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,343Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,413Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,483Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,541Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,600Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,661Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,722Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,778Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,837Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:24,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:24,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:24,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:24,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:24,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:24,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:24,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:24,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:24,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:14:24,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:14:24,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:24,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:24,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:24,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:24,922Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 6 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:24,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:24,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:24,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:24,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:24,944Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:24,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:24,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:24,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:24,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:24,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:24,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:24,977Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:14:24,978Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:24,983Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:24,988Z lrauvNc4ToNetcdf.py createSeries():299 depth : 7 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:24,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:25,024Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 5 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:25,112Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:25,132Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 5 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:25,209Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:25,233Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 5 v_t values found before 2020-07-07 21:06:00 and after 2020-07-07 21:18:00 INFO 2024-04-09 23:14:25,310Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:25,311Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T210638/202007072106_202007072118.nc4 INFO 2024-04-09 23:14:25,411Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 333 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:25,507Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T210638/202007072106_202007072118.nc4 INFO 2024-04-09 23:14:25,507Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:25,508Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:25,509Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 332 2.23 - - INFO 2024-04-09 23:14:25,509Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 332 INFO 2024-04-09 23:14:25,529Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T200651/20200707T221802/data.csv INFO 2024-04-09 23:14:25,635Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:25,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:25,899Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:26,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T210638/202007072106_202007072118_2S_scieng.nc INFO 2024-04-09 23:14:26,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007072106_202007072118.nc4 INFO 2024-04-09 23:14:26,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T211903/202007072119_202007080521.nc4 file... INFO 2024-04-09 23:14:26,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007072119_202007080521.nc4 INFO 2024-04-09 23:14:27,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T211903/202007072119_202007080521.nc4 INFO 2024-04-09 23:14:27,305Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:27,429Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:27,546Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:27,673Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:27,789Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:27,896Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,009Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,113Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,217Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,325Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,459Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,585Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,694Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,794Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:28,900Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,016Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:29,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:29,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:29,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:29,131Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 1 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:29,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:29,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:29,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:29,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:29,239Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 13 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:29,267Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 13 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:29,292Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:29,305Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:29,318Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:29,330Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:29,352Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,403Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:29,413Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:29,460Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:29,506Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:29,553Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:29,601Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:29,643Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:29,680Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:14:29,711Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 28 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:14:29,743Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,753Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:29,755Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,764Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:29,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:29,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:29,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:29,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:29,805Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:29,875Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:29,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:29,944Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:30,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:30,050Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 32 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:30,461Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:30,503Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 32 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:30,888Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:30,936Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 32 v_t values found before 2020-07-07 21:19:00 and after 2020-07-08 05:21:00 INFO 2024-04-09 23:14:31,366Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:31,367Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T211903/202007072119_202007080521.nc4 INFO 2024-04-09 23:14:31,587Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 67241 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:31,706Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T211903/202007072119_202007080521.nc4 INFO 2024-04-09 23:14:31,707Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:31,709Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:31,710Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.358 0.0001640 -0.0000034 627 4.22 -0.09 -0.15 2020-07-07 21:51:49.324930906 INFO 2024-04-09 23:14:31,713Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.370 0.0001088 -0.0000307 186 1.25 -2.77 -4.56 2020-07-07 21:53:04.446300030 INFO 2024-04-09 23:14:31,717Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.370 -0.0006891 -0.0011036 4895 32.96 -3.81 -6.21 2020-07-07 22:26:02.158416986 INFO 2024-04-09 23:14:31,723Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.397 0.0017776 -0.0019996 9786 66.12 -3.32 -5.60 2020-07-07 23:32:09.782346964 INFO 2024-04-09 23:14:31,729Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0000013 -0.0000818 237 1.68 -5.36 -9.04 2020-07-07 23:33:50.775221109 INFO 2024-04-09 23:14:31,733Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.333 1.6360923 3.2287886 12485 84.39 -4568.22 7089.49 2020-07-08 00:58:14.747158051 INFO 2024-04-09 23:14:31,738Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.388 0.0023616 -0.0180948 96 0.64 3303.31 -5240.05 2020-07-08 00:58:53.506409883 INFO 2024-04-09 23:14:31,742Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.374 -1.6350101 -3.2150544 12148 81.80 -3991.41 -7283.25 2020-07-08 02:20:41.743134022 INFO 2024-04-09 23:14:31,749Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.397 0.0001199 -0.0001502 166 1.11 -13.73 -25.05 2020-07-08 02:21:48.818926096 INFO 2024-04-09 23:14:31,753Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.379 0.0004731 0.0000010 9611 64.71 0.00 0.00 2020-07-08 03:26:31.962119102 INFO 2024-04-09 23:14:31,759Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.363 0.0000963 -0.0001560 281 2.09 -7.53 -13.83 2020-07-08 03:28:37.812041998 INFO 2024-04-09 23:14:31,763Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.376 0.0000613 -0.0004796 9839 66.25 -0.72 -1.34 2020-07-08 04:34:52.960160017 INFO 2024-04-09 23:14:31,770Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 6883 46.34 - - INFO 2024-04-09 23:14:31,770Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 67240 INFO 2024-04-09 23:14:31,801Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200707T201915/20200708T062114/data.csv INFO 2024-04-09 23:14:31,900Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:31,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:32,383Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:32,708Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200707T211903/202007072119_202007080521_2S_scieng.nc INFO 2024-04-09 23:14:32,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007072119_202007080521.nc4 INFO 2024-04-09 23:14:33,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T052114/202007080521_202007080751.nc4 file... INFO 2024-04-09 23:14:33,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007080521_202007080751.nc4 INFO 2024-04-09 23:14:33,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T052114/202007080521_202007080751.nc4 INFO 2024-04-09 23:14:33,590Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:33,677Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:33,757Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:33,845Z lrauvNc4ToNetcdf.py createSeries():299 time : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:33,925Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,001Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,077Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,157Z lrauvNc4ToNetcdf.py createSeries():299 time : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,236Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,311Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,396Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,474Z lrauvNc4ToNetcdf.py createSeries():299 time : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,552Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,627Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,700Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,782Z lrauvNc4ToNetcdf.py createSeries():299 time : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:34,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:34,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:34,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:34,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:34,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:34,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:34,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:34,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:34,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:34,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:34,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:34,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:34,939Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:34,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:34,949Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:34,971Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:34,989Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:35,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:35,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:35,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:35,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:35,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:35,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:14:35,106Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:14:35,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:35,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:35,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:35,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:35,139Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:35,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:35,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:35,150Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:35,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:35,181Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:35,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:35,213Z lrauvNc4ToNetcdf.py createSeries():299 depth : 122 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:35,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:35,274Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 115 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:36,387Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:36,425Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 115 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:37,537Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:37,572Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 115 v_t values found before 2020-07-08 05:21:00 and after 2020-07-08 07:51:00 INFO 2024-04-09 23:14:38,677Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:38,678Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T052114/202007080521_202007080751.nc4 INFO 2024-04-09 23:14:38,841Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 22357 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:39,004Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T052114/202007080521_202007080751.nc4 INFO 2024-04-09 23:14:39,005Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:39,007Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 5680 38.24 - - - INFO 2024-04-09 23:14:39,008Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.361 0.0001636 -0.0000906 8348 56.21 -0.16 -0.30 2020-07-08 06:55:42.118612051 INFO 2024-04-09 23:14:39,014Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.412 0.0000289 -0.0000021 75 0.50 -0.41 -0.77 2020-07-08 06:56:12.387953043 INFO 2024-04-09 23:14:39,018Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 8253 55.60 - - INFO 2024-04-09 23:14:39,019Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 22356 INFO 2024-04-09 23:14:39,051Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T042114/20200708T085148/data.csv INFO 2024-04-09 23:14:39,148Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:39,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:39,644Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:40,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T052114/202007080521_202007080751_2S_scieng.nc INFO 2024-04-09 23:14:40,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007080521_202007080751.nc4 INFO 2024-04-09 23:14:40,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T075149/202007080751_202007081535.nc4 file... INFO 2024-04-09 23:14:40,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007080751_202007081535.nc4 INFO 2024-04-09 23:14:40,995Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T075149/202007080751_202007081535.nc4 INFO 2024-04-09 23:14:41,041Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,190Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,335Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,461Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,583Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,698Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,806Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:41,921Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,023Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,130Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,231Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,327Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,424Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,524Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,637Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,743Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:42,828Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:42,834Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:42,840Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:42,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:42,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:42,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:42,878Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 55 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:42,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:42,959Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 38 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:42,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:42,987Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 38 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:43,011Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 6 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:43,023Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 6 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,032Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:43,034Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 6 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:43,046Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 6 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:43,065Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:43,122Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:43,177Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:43,233Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:43,292Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:43,348Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:43,405Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:43,455Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:14:43,490Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 75 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:14:43,526Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 8 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:43,539Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 8 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:14:43,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:43,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:43,575Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:43,581Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:43,597Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:43,673Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:43,747Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:43,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:43,848Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 101 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:44,895Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:44,940Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 101 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:46,086Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:46,130Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 101 v_t values found before 2020-07-08 07:51:00 and after 2020-07-08 15:35:00 INFO 2024-04-09 23:14:47,155Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:47,156Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T075149/202007080751_202007081535.nc4 INFO 2024-04-09 23:14:47,365Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 68668 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:47,474Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 24 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T075149/202007080751_202007081535.nc4 INFO 2024-04-09 23:14:47,475Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:47,477Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 1271 8.55 - - - INFO 2024-04-09 23:14:47,479Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.381 0.0001466 0.0002004 5238 35.26 0.58 1.05 2020-07-08 08:35:38.794125080 INFO 2024-04-09 23:14:47,483Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.370 -0.0001505 0.0000343 594 3.99 0.87 1.59 2020-07-08 08:39:38.810388088 INFO 2024-04-09 23:14:47,487Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.379 0.0009964 0.0008440 5168 34.79 2.52 4.49 2020-07-08 09:14:26.865669966 INFO 2024-04-09 23:14:47,492Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.366 0.0000459 -0.0000420 166 1.23 -3.56 -6.34 2020-07-08 09:15:40.822381973 INFO 2024-04-09 23:14:47,495Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.362 0.0007355 0.0010598 5356 36.06 3.12 5.45 2020-07-08 09:51:44.842490911 INFO 2024-04-09 23:14:47,500Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.334 0.0000081 -0.0000191 357 2.40 -0.85 -1.48 2020-07-08 09:54:09.150034904 INFO 2024-04-09 23:14:47,504Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.379 0.0000650 0.0006984 5330 35.88 2.11 3.61 2020-07-08 10:30:02.526083945 INFO 2024-04-09 23:14:47,508Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.357 0.0001210 0.0000262 1078 7.25 0.39 0.67 2020-07-08 10:37:18.127634048 INFO 2024-04-09 23:14:47,512Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.373 0.0005645 -0.0005182 5819 39.18 -1.46 -2.45 2020-07-08 11:16:29.115129948 INFO 2024-04-09 23:14:47,517Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.389 0.0003255 0.0001968 395 2.85 7.62 12.78 2020-07-08 11:19:20.761930943 INFO 2024-04-09 23:14:47,520Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.373 -0.0001870 -0.0015919 5138 34.59 -5.18 -8.53 2020-07-08 11:53:56.646302938 INFO 2024-04-09 23:14:47,524Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.409 0.0002547 0.0002803 402 2.90 10.87 17.88 2020-07-08 11:56:51.320920944 INFO 2024-04-09 23:14:47,528Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.376 0.0010269 -0.0007743 5000 33.66 -2.64 -4.26 2020-07-08 12:30:31.418313980 INFO 2024-04-09 23:14:47,533Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.398 -0.0011104 0.0000032 434 3.12 0.12 0.19 2020-07-08 12:33:38.803131104 INFO 2024-04-09 23:14:47,537Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.372 0.0008176 -0.0011271 5079 34.20 -3.85 -6.11 2020-07-08 13:07:50.936500072 INFO 2024-04-09 23:14:47,542Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.365 0.0002542 0.0001820 366 2.69 7.91 12.54 2020-07-08 13:10:32.623997927 INFO 2024-04-09 23:14:47,546Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.377 0.0002179 0.0002374 5371 36.16 0.78 1.22 2020-07-08 13:46:42.679124117 INFO 2024-04-09 23:14:47,551Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.358 0.0000750 0.0000512 114 0.85 7.19 11.19 2020-07-08 13:47:33.906588078 INFO 2024-04-09 23:14:47,555Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.375 0.0002763 -0.0005296 5151 34.68 -1.84 -2.83 2020-07-08 14:22:15.033222914 INFO 2024-04-09 23:14:47,559Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.396 -0.0000815 0.0000532 381 2.85 2.25 3.46 2020-07-08 14:25:06.422561884 INFO 2024-04-09 23:14:47,563Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.375 0.0006136 0.0002033 5131 34.55 0.71 1.09 2020-07-08 14:59:39.634215117 INFO 2024-04-09 23:14:47,568Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.362 0.0001283 -0.0000109 202 1.50 -0.87 -1.35 2020-07-08 15:01:09.893513918 INFO 2024-04-09 23:14:47,571Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.372 0.0000132 0.0000553 5117 34.45 0.19 0.30 2020-07-08 15:35:37.308242083 INFO 2024-04-09 23:14:47,576Z lrauvNc4ToNetcdf.py nudge_coords():871 24: - - - 9 0.05 - - INFO 2024-04-09 23:14:47,576Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 68667 INFO 2024-04-09 23:14:47,608Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T065149/20200708T163541/data.csv INFO 2024-04-09 23:14:47,708Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:47,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:48,272Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:48,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T075149/202007080751_202007081535_2S_scieng.nc INFO 2024-04-09 23:14:48,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007080751_202007081535.nc4 INFO 2024-04-09 23:14:48,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T153543/202007081535_202007081543.nc4 file... INFO 2024-04-09 23:14:48,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007081535_202007081543.nc4 INFO 2024-04-09 23:14:49,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T153543/202007081535_202007081543.nc4 INFO 2024-04-09 23:14:49,332Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,388Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,442Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,497Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,551Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,604Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,659Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,714Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,825Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,878Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,931Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:49,984Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,042Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,096Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,149Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:50,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:50,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:50,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:50,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:50,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:50,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:50,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:50,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:50,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:14:50,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:14:50,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:50,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:14:50,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:50,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:14:50,227Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:50,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:14:50,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:14:50,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:14:50,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:14:50,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:14:50,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:14:50,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:50,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:14:50,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:14:50,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:14:50,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:50,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:14:50,270Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:50,275Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:50,280Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:50,308Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 39 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:50,653Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:50,672Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 39 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:51,024Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:51,047Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 39 v_t values found before 2020-07-08 15:35:00 and after 2020-07-08 15:43:00 INFO 2024-04-09 23:14:51,395Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:51,395Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T153543/202007081535_202007081543.nc4 INFO 2024-04-09 23:14:51,486Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 543 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:51,576Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T153543/202007081535_202007081543.nc4 INFO 2024-04-09 23:14:51,576Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:51,577Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:51,578Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.374 -0.0000322 0.0000195 67 0.44 5.25 8.11 2020-07-08 15:40:03.626122952 INFO 2024-04-09 23:14:51,580Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 475 3.19 - - INFO 2024-04-09 23:14:51,580Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 542 INFO 2024-04-09 23:14:51,601Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T143554/20200708T164315/data.csv INFO 2024-04-09 23:14:51,711Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:51,714Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:52,085Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:52,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T153543/202007081535_202007081543_2S_scieng.nc INFO 2024-04-09 23:14:52,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007081535_202007081543.nc4 INFO 2024-04-09 23:14:52,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T154317/202007081543_202007081821.nc4 file... INFO 2024-04-09 23:14:52,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007081543_202007081821.nc4 INFO 2024-04-09 23:14:53,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T154317/202007081543_202007081821.nc4 INFO 2024-04-09 23:14:53,403Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,500Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,577Z lrauvNc4ToNetcdf.py createSeries():299 depth : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,652Z lrauvNc4ToNetcdf.py createSeries():299 time : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,726Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,798Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,872Z lrauvNc4ToNetcdf.py createSeries():299 depth : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:53,950Z lrauvNc4ToNetcdf.py createSeries():299 time : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,017Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,084Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,158Z lrauvNc4ToNetcdf.py createSeries():299 depth : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,235Z lrauvNc4ToNetcdf.py createSeries():299 time : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,311Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,380Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,449Z lrauvNc4ToNetcdf.py createSeries():299 depth : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,519Z lrauvNc4ToNetcdf.py createSeries():299 time : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:54,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:54,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:54,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:54,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:54,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:54,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:54,610Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:54,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:54,644Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:54,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:54,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:54,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:54,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:54,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:54,678Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:54,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:54,716Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:54,717Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:54,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:54,727Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,751Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:54,755Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:54,784Z lrauvNc4ToNetcdf.py createSeries():299 depth : 135 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:54,838Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 132 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,897Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:54,931Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 132 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:54,994Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:55,021Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 132 v_t values found before 2020-07-08 15:43:00 and after 2020-07-08 18:21:00 INFO 2024-04-09 23:14:55,077Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:55,078Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T154317/202007081543_202007081821.nc4 INFO 2024-04-09 23:14:55,215Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 22923 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:14:55,312Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 10 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T154317/202007081543_202007081821.nc4 INFO 2024-04-09 23:14:55,312Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:14:55,313Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:14:55,314Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 0.0000197 0.0000193 33 0.21 10.80 16.68 2020-07-08 15:47:37.109173059 INFO 2024-04-09 23:14:55,316Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 0.0001594 0.0001323 632 4.25 3.74 5.77 2020-07-08 15:51:52.441180944 INFO 2024-04-09 23:14:55,319Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.368 -0.0003688 0.0000159 161 1.09 1.76 2.72 2020-07-08 15:52:58.029270887 INFO 2024-04-09 23:14:55,322Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.361 0.0005079 0.0008932 9613 64.73 1.66 2.56 2020-07-08 16:57:42.019506931 INFO 2024-04-09 23:14:55,327Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.374 0.0000012 -0.0000500 165 1.19 -5.06 -7.79 2020-07-08 16:58:53.786123991 INFO 2024-04-09 23:14:55,330Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.373 0.0000671 -0.0000406 321 2.21 -2.21 -3.40 2020-07-08 17:01:06.876243114 INFO 2024-04-09 23:14:55,333Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.364 0.0023464 0.0001778 10009 67.39 0.32 0.49 2020-07-08 18:08:30.691425085 INFO 2024-04-09 23:14:55,339Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.390 -0.0004215 0.0002152 812 5.46 4.74 7.30 2020-07-08 18:13:58.873910904 INFO 2024-04-09 23:14:55,341Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.369 -0.0001966 0.0001842 823 5.53 4.00 6.17 2020-07-08 18:19:31.378123045 INFO 2024-04-09 23:14:55,344Z lrauvNc4ToNetcdf.py nudge_coords():871 10: - - - 353 2.37 - - INFO 2024-04-09 23:14:55,344Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 22922 INFO 2024-04-09 23:14:55,372Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T144328/20200708T192154/data.csv INFO 2024-04-09 23:14:55,468Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:14:55,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:14:55,914Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:14:56,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T154317/202007081543_202007081821_2S_scieng.nc INFO 2024-04-09 23:14:56,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007081543_202007081821.nc4 INFO 2024-04-09 23:14:56,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T182154/202007081821_202007082123.nc4 file... INFO 2024-04-09 23:14:56,849Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007081821_202007082123.nc4 INFO 2024-04-09 23:14:57,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T182154/202007081821_202007082123.nc4 INFO 2024-04-09 23:14:57,333Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,417Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,496Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,579Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,660Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,736Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,809Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,885Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:57,958Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,039Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,114Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,185Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,262Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,341Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,425Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,508Z lrauvNc4ToNetcdf.py createSeries():299 time : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:14:58,575Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:14:58,581Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:14:58,585Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:14:58,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:14:58,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:14:58,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:14:58,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:14:58,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:14:58,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:14:58,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:14:58,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:14:58,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:14:58,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:14:58,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:14:58,690Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:14:58,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:14:58,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:14:58,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:14:58,736Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:58,745Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:58,778Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:58,810Z lrauvNc4ToNetcdf.py createSeries():299 depth : 103 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:58,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:14:58,873Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 100 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:14:59,797Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:14:59,830Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 100 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:15:00,834Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:00,870Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 100 v_t values found before 2020-07-08 18:21:00 and after 2020-07-08 21:23:00 INFO 2024-04-09 23:15:02,001Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:02,002Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T182154/202007081821_202007082123.nc4 INFO 2024-04-09 23:15:02,204Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 26790 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:02,312Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 9 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T182154/202007081821_202007082123.nc4 INFO 2024-04-09 23:15:02,312Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:02,314Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 194 1.30 - - - INFO 2024-04-09 23:15:02,314Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.367 0.0003914 0.0000329 384 2.58 1.53 2.36 2020-07-08 18:26:12.186640024 INFO 2024-04-09 23:15:02,317Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 0.0007685 -0.0003155 5442 36.64 -1.02 -1.60 2020-07-08 19:02:50.878312111 INFO 2024-04-09 23:15:02,321Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.392 -0.0001533 -0.0000225 577 4.14 -0.64 -1.01 2020-07-08 19:06:59.612885952 INFO 2024-04-09 23:15:02,324Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.381 0.0007877 0.0000289 6261 42.15 0.08 0.13 2020-07-08 19:49:09.139898062 INFO 2024-04-09 23:15:02,327Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.380 0.0022144 -0.0006580 7764 52.99 -1.43 -2.30 2020-07-08 20:42:08.950018883 INFO 2024-04-09 23:15:02,331Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.375 0.0001959 -0.0003755 644 4.34 -9.99 -16.05 2020-07-08 20:46:29.557214975 INFO 2024-04-09 23:15:02,334Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.396 -0.0000306 -0.0001646 123 0.82 -23.12 -37.13 2020-07-08 20:47:19.259516001 INFO 2024-04-09 23:15:02,337Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.374 0.0030072 -0.0012678 5390 36.29 -4.03 -6.47 2020-07-08 21:23:36.925081015 INFO 2024-04-09 23:15:02,340Z lrauvNc4ToNetcdf.py nudge_coords():871 9: - - - 10 0.06 - - INFO 2024-04-09 23:15:02,341Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 26789 INFO 2024-04-09 23:15:02,372Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T172154/20200708T222341/data.csv INFO 2024-04-09 23:15:02,487Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:02,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:03,100Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:03,930Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T182154/202007081821_202007082123_2S_scieng.nc INFO 2024-04-09 23:15:03,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007081821_202007082123.nc4 INFO 2024-04-09 23:15:04,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T212343/202007082123_202007082240.nc4 file... INFO 2024-04-09 23:15:04,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007082123_202007082240.nc4 INFO 2024-04-09 23:15:04,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T212343/202007082123_202007082240.nc4 INFO 2024-04-09 23:15:04,824Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:04,934Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,043Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,152Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,262Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,371Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,485Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,578Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,673Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,755Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,836Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:05,934Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,037Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,138Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,228Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,332Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:06,395Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:06,400Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:06,405Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:06,411Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 1 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:06,417Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 10 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:06,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:06,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:06,435Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 2 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:06,445Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 18 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:06,452Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 18 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:06,459Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 3 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:06,465Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 3 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:06,471Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 3 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:06,477Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 3 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:06,484Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 88 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:06,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:06,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:06,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:06,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:06,529Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:06,546Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:06,564Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:06,618Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,705Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:06,744Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,827Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:06,865Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 87 v_t values found before 2020-07-08 21:23:00 and after 2020-07-08 22:40:00 INFO 2024-04-09 23:15:06,947Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:06,948Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T212343/202007082123_202007082240.nc4 INFO 2024-04-09 23:15:07,130Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10916 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:07,304Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 9 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T212343/202007082123_202007082240.nc4 INFO 2024-04-09 23:15:07,304Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:07,305Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:07,306Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.386 0.0000973 -0.0001515 157 1.14 -15.37 -24.69 2020-07-08 21:27:47.669109106 INFO 2024-04-09 23:15:07,308Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.384 0.0005435 -0.0006013 1254 8.49 -8.16 -13.12 2020-07-08 21:36:17.727888107 INFO 2024-04-09 23:15:07,311Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.353 0.0000662 -0.0000825 183 1.23 -7.75 -12.46 2020-07-08 21:37:31.723072052 INFO 2024-04-09 23:15:07,313Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.388 0.0007215 -0.0008530 2659 17.90 -5.50 -8.83 2020-07-08 21:55:25.918102026 INFO 2024-04-09 23:15:07,315Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.380 -0.0001155 -0.0006161 795 5.35 -13.28 -21.35 2020-07-08 22:00:47.133003950 INFO 2024-04-09 23:15:07,318Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.360 0.0000340 -0.0000190 72 0.48 -4.57 -7.36 2020-07-08 22:01:16.241720915 INFO 2024-04-09 23:15:07,320Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.370 -0.0017736 -0.0023514 4530 30.50 -8.87 -14.29 2020-07-08 22:31:46.394112110 INFO 2024-04-09 23:15:07,323Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.368 0.0001153 0.0000434 1223 8.52 0.59 0.94 2020-07-08 22:40:17.756247044 INFO 2024-04-09 23:15:07,325Z lrauvNc4ToNetcdf.py nudge_coords():871 9: - - - 42 0.28 - - INFO 2024-04-09 23:15:07,326Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10915 INFO 2024-04-09 23:15:07,361Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T202353/20200708T234035/data.csv INFO 2024-04-09 23:15:07,461Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:07,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:08,141Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:09,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T212343/202007082123_202007082240_2S_scieng.nc INFO 2024-04-09 23:15:09,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007082123_202007082240.nc4 INFO 2024-04-09 23:15:09,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T224035/202007082240_202007090024.nc4 file... INFO 2024-04-09 23:15:09,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007082240_202007090024.nc4 INFO 2024-04-09 23:15:13,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T224035/202007082240_202007090024.nc4 INFO 2024-04-09 23:15:14,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:14,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:14,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:14,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:14,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:14,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:14,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:14,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:14,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:14,751Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 3 v_t values found before 2020-07-08 22:40:00 and after 2020-07-09 00:24:00 INFO 2024-04-09 23:15:14,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:14,764Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 3 v_t values found before 2020-07-08 22:40:00 and after 2020-07-09 00:24:00 INFO 2024-04-09 23:15:14,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:14,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:14,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:14,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:14,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:14,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:14,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:14,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:14,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:14,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:14,867Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:14,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:14,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:15,002Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:15,098Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:15,210Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:15,211Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T224035/202007082240_202007090024.nc4 INFO 2024-04-09 23:15:15,422Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 14867 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:15,589Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 7 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T224035/202007082240_202007090024.nc4 INFO 2024-04-09 23:15:15,590Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:15,591Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:15,592Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 0.0014020 -0.0006134 5196 34.98 -2.04 -3.25 2020-07-08 23:17:39.216280937 INFO 2024-04-09 23:15:15,596Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 -0.0000077 -0.0000264 212 1.53 -2.00 -3.19 2020-07-08 23:19:11.626179934 INFO 2024-04-09 23:15:15,599Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.367 -0.0000400 0.0001178 5349 36.33 0.38 0.60 2020-07-08 23:55:32.016112089 INFO 2024-04-09 23:15:15,603Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.420 -0.0000092 0.0000193 38 0.25 9.21 14.47 2020-07-08 23:55:47.331763983 INFO 2024-04-09 23:15:15,607Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.370 0.0002715 -0.0001804 1389 9.66 -2.20 -3.46 2020-07-09 00:05:27.194295883 INFO 2024-04-09 23:15:15,610Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.393 -0.0000387 -0.0000347 208 1.39 -2.94 -4.61 2020-07-09 00:06:51.235214949 INFO 2024-04-09 23:15:15,613Z lrauvNc4ToNetcdf.py nudge_coords():871 7: - - - 2474 16.65 - - INFO 2024-04-09 23:15:15,613Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 14866 INFO 2024-04-09 23:15:15,652Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T214035/20200709T012331/data.csv INFO 2024-04-09 23:15:15,755Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:15,764Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:15,998Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:16,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200708T224035/202007082240_202007090024_2S_scieng.nc INFO 2024-04-09 23:15:16,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007082240_202007090024.nc4 INFO 2024-04-09 23:15:16,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T002549/202007090026_202007090049.nc4 file... INFO 2024-04-09 23:15:16,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007090026_202007090049.nc4 INFO 2024-04-09 23:15:16,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T002549/202007090026_202007090049.nc4 INFO 2024-04-09 23:15:16,880Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:16,948Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,042Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,140Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,210Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,276Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,344Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,416Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,482Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,547Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,610Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,683Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,755Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,821Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,889Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:17,960Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:18,004Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:18,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:18,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:18,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:18,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:18,026Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:18,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:18,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:18,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:18,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:15:18,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:15:18,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:18,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:18,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:18,046Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:18,048Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:18,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:18,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:15:18,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:15:18,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:15:18,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:15:18,072Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:15:18,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:15:18,077Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:18,079Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:18,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:18,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:18,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:18,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:15:18,105Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:18,110Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:18,111Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:18,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:18,117Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:18,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:18,151Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 84 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:19,005Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:19,037Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 84 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:19,938Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:19,964Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 84 v_t values found before 2020-07-09 00:26:00 and after 2020-07-09 00:49:00 INFO 2024-04-09 23:15:20,907Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:20,908Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T002549/202007090026_202007090049.nc4 INFO 2024-04-09 23:15:21,035Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 784 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:21,170Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T002549/202007090026_202007090049.nc4 INFO 2024-04-09 23:15:21,170Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:21,171Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:21,172Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.381 -0.0296200 0.0059556 139 0.93 468.82 1188.00 2020-07-09 00:45:13.576037884 INFO 2024-04-09 23:15:21,174Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 644 4.33 - - INFO 2024-04-09 23:15:21,174Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 783 INFO 2024-04-09 23:15:21,209Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T232602/20200709T014934/data.csv INFO 2024-04-09 23:15:21,310Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:21,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:21,567Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:21,716Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T002549/202007090026_202007090049_2S_scieng.nc INFO 2024-04-09 23:15:21,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007090026_202007090049.nc4 INFO 2024-04-09 23:15:22,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T005034/202007090050_202007090329.nc4 file... INFO 2024-04-09 23:15:22,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007090050_202007090329.nc4 INFO 2024-04-09 23:15:23,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T005034/202007090050_202007090329.nc4 INFO 2024-04-09 23:15:24,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:24,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:24,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:24,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:24,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:24,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:24,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:24,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:24,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:24,489Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 18 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:24,505Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 18 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:24,518Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 3 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:24,525Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 3 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:24,532Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 3 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:24,539Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 3 v_t values found before 2020-07-09 00:50:00 and after 2020-07-09 03:29:00 INFO 2024-04-09 23:15:24,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:24,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:24,582Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:24,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:24,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:24,599Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:24,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:24,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:24,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:24,801Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:24,928Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:25,053Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:25,054Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T005034/202007090050_202007090329.nc4 INFO 2024-04-09 23:15:25,288Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 22125 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:25,451Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T005034/202007090050_202007090329.nc4 INFO 2024-04-09 23:15:25,451Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:25,452Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:25,453Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 -0.0001910 -0.0001103 916 6.28 -2.07 -3.26 2020-07-09 01:06:05.023678064 INFO 2024-04-09 23:15:25,456Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.381 -0.0000167 0.0000368 835 5.62 0.77 1.21 2020-07-09 01:11:42.453623056 INFO 2024-04-09 23:15:25,459Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.378 0.0008578 0.0000732 270 1.81 4.77 7.49 2020-07-09 01:13:31.546575069 INFO 2024-04-09 23:15:25,462Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.352 0.0000031 0.0000094 75 0.50 2.23 3.50 2020-07-09 01:14:01.873899937 INFO 2024-04-09 23:15:25,464Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.389 -0.0001615 0.0005839 5766 38.82 1.80 2.79 2020-07-09 01:52:51.470375061 INFO 2024-04-09 23:15:25,469Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.353 0.0000727 0.0000030 221 1.48 0.24 0.37 2020-07-09 01:54:20.872699976 INFO 2024-04-09 23:15:25,472Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.391 0.0003183 0.0000998 5362 36.10 0.33 0.51 2020-07-09 02:30:27.200355053 INFO 2024-04-09 23:15:25,476Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.381 0.0008576 0.0001218 192 1.32 11.15 17.15 2020-07-09 02:31:46.559467077 INFO 2024-04-09 23:15:25,479Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.357 0.0008391 -0.0008127 5319 35.81 -2.72 -4.21 2020-07-09 03:07:35.568078995 INFO 2024-04-09 23:15:25,483Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.396 0.0003780 0.0001463 315 2.14 8.17 12.64 2020-07-09 03:09:44.704165936 INFO 2024-04-09 23:15:25,486Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.347 0.0001145 0.0000095 198 1.34 0.85 1.32 2020-07-09 03:11:05.366394997 INFO 2024-04-09 23:15:25,488Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.374 0.0000270 0.0000340 74 0.49 8.26 12.77 2020-07-09 03:11:35.315061092 INFO 2024-04-09 23:15:25,491Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 2581 17.37 - - INFO 2024-04-09 23:15:25,491Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 22124 INFO 2024-04-09 23:15:25,547Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200708T235045/20200709T042858/data.csv INFO 2024-04-09 23:15:25,646Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:25,653Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:25,964Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:26,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T005034/202007090050_202007090329_2S_scieng.nc INFO 2024-04-09 23:15:26,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007090050_202007090329.nc4 INFO 2024-04-09 23:15:26,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033102/202007090331_202007090336.nc4 file... INFO 2024-04-09 23:15:26,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007090331_202007090336.nc4 INFO 2024-04-09 23:15:26,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033102/202007090331_202007090336.nc4 INFO 2024-04-09 23:15:26,875Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:26,948Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,011Z lrauvNc4ToNetcdf.py createSeries():299 depth : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,075Z lrauvNc4ToNetcdf.py createSeries():299 time : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,139Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,202Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,266Z lrauvNc4ToNetcdf.py createSeries():299 depth : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,330Z lrauvNc4ToNetcdf.py createSeries():299 time : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,392Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,454Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,515Z lrauvNc4ToNetcdf.py createSeries():299 depth : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,577Z lrauvNc4ToNetcdf.py createSeries():299 time : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,640Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,703Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,765Z lrauvNc4ToNetcdf.py createSeries():299 depth : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,828Z lrauvNc4ToNetcdf.py createSeries():299 time : 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:27,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:27,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:27,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:27,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:27,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:27,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:27,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:27,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:27,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:15:27,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:15:27,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:27,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:27,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:27,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:27,915Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 104 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:27,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:15:27,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:15:27,930Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:15:27,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:15:27,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:15:27,939Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:15:27,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:27,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:27,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:15:27,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:15:27,955Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:27,960Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:15:27,961Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude empty so skipping INFO 2024-04-09 23:15:27,964Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude empty so skipping INFO 2024-04-09 23:15:27,967Z lrauvNc4ToNetcdf.py createSeries():299 depth : 44 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:27,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable depth empty so skipping INFO 2024-04-09 23:15:27,999Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 101 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:29,077Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:29,098Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 101 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:30,105Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:30,126Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 101 v_t values found before 2020-07-09 03:31:00 and after 2020-07-09 03:36:00 INFO 2024-04-09 23:15:31,134Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:31,134Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033102/202007090331_202007090336.nc4 INFO 2024-04-09 23:15:31,238Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 44 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:31,342Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033102/202007090331_202007090336.nc4 INFO 2024-04-09 23:15:31,343Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:31,344Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:31,344Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 43 0.31 - - INFO 2024-04-09 23:15:31,345Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 43 INFO 2024-04-09 23:15:31,366Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200709T023117/20200709T043643/data.csv INFO 2024-04-09 23:15:31,463Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:31,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:31,678Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:31,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033102/202007090331_202007090336_2S_scieng.nc INFO 2024-04-09 23:15:31,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007090331_202007090336.nc4 INFO 2024-04-09 23:15:31,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033643/202007090336_202007090341.nc4 file... INFO 2024-04-09 23:15:31,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007090336_202007090341.nc4 INFO 2024-04-09 23:15:32,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033643/202007090336_202007090341.nc4 INFO 2024-04-09 23:15:32,307Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,364Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,424Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,486Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,543Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,600Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,656Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,714Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,826Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,882Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,938Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:32,997Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,055Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,113Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,173Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:33,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:15:33,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:15:33,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:15:33,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping INFO 2024-04-09 23:15:33,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:15:33,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:15:33,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping INFO 2024-04-09 23:15:33,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping INFO 2024-04-09 23:15:33,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:15:33,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:15:33,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:33,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:33,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:33,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:33,235Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:33,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:33,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:15:33,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:15:33,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:15:33,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:15:33,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:15:33,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:33,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:15:33,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:33,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:33,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:33,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:15:33,276Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:33,281Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:33,286Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:33,315Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 31 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,356Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:33,375Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 31 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,415Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:33,435Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 31 v_t values found before 2020-07-09 03:36:00 and after 2020-07-09 03:41:00 INFO 2024-04-09 23:15:33,476Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:33,476Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033643/202007090336_202007090341.nc4 INFO 2024-04-09 23:15:33,577Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 538 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:33,631Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033643/202007090336_202007090341.nc4 INFO 2024-04-09 23:15:33,632Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:15:33,632Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:15:33,652Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200709T023643/20200709T044113/data.csv INFO 2024-04-09 23:15:33,753Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:15:33,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:15:33,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:15:33,758Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:33,959Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:34,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T033643/202007090336_202007090341_2S_scieng.nc INFO 2024-04-09 23:15:34,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007090336_202007090341.nc4 INFO 2024-04-09 23:15:35,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T034211/202007090342_202007091833.nc4 file... INFO 2024-04-09 23:15:35,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007090342_202007091833.nc4 INFO 2024-04-09 23:15:35,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T034211/202007090342_202007091833.nc4 INFO 2024-04-09 23:15:36,008Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,163Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,315Z lrauvNc4ToNetcdf.py createSeries():299 depth : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,473Z lrauvNc4ToNetcdf.py createSeries():299 time : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,607Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,727Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,855Z lrauvNc4ToNetcdf.py createSeries():299 depth : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:36,976Z lrauvNc4ToNetcdf.py createSeries():299 time : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,099Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,224Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,350Z lrauvNc4ToNetcdf.py createSeries():299 depth : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,475Z lrauvNc4ToNetcdf.py createSeries():299 time : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,601Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,725Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,853Z lrauvNc4ToNetcdf.py createSeries():299 depth : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:37,976Z lrauvNc4ToNetcdf.py createSeries():299 time : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,072Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:38,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:38,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:38,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:38,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:38,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:38,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:38,161Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 11 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:38,292Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:38,302Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 5 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:38,350Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 5 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:38,392Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 1 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:38,412Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 1 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:38,431Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 1 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:38,450Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 1 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:38,485Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:38,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:38,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:38,590Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:38,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:38,620Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:38,739Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:38,859Z lrauvNc4ToNetcdf.py createSeries():299 depth : 12 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:38,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:39,011Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 11 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:39,218Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:39,271Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 11 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:39,482Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:39,535Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 11 v_t values found before 2020-07-09 03:42:00 and after 2020-07-09 18:33:00 INFO 2024-04-09 23:15:39,740Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:39,741Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T034211/202007090342_202007091833.nc4 INFO 2024-04-09 23:15:40,009Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 130960 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:40,214Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 39 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T034211/202007090342_202007091833.nc4 INFO 2024-04-09 23:15:40,215Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:40,217Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:40,219Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.361 -0.0000255 0.0000162 107 0.77 2.52 3.90 2020-07-09 03:46:32.619597912 INFO 2024-04-09 23:15:40,223Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.377 -0.0006763 -0.0001028 1189 8.26 -1.49 -2.31 2020-07-09 03:54:48.641093969 INFO 2024-04-09 23:15:40,227Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.385 0.0000127 0.0000083 85 0.57 1.75 2.71 2020-07-09 03:55:23.009044886 INFO 2024-04-09 23:15:40,231Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.347 0.0001092 0.0000272 258 1.73 1.88 2.91 2020-07-09 03:57:07.322247028 INFO 2024-04-09 23:15:40,235Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.366 -0.0003078 0.0000809 9816 66.09 0.14 0.23 2020-07-09 05:03:13.164380074 INFO 2024-04-09 23:15:40,242Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.419 0.0001991 -0.0000027 568 4.09 -0.08 -0.12 2020-07-09 05:07:18.879815102 INFO 2024-04-09 23:15:40,248Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.408 -0.0003869 -0.0007081 10019 67.46 -1.22 -1.95 2020-07-09 06:14:46.704112053 INFO 2024-04-09 23:15:40,255Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.345 -0.0000219 -0.0000090 227 1.67 -0.63 -1.00 2020-07-09 06:16:27.263449906 INFO 2024-04-09 23:15:40,261Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.374 0.0016317 0.0001597 10073 67.82 0.27 0.44 2020-07-09 07:24:16.873136997 INFO 2024-04-09 23:15:40,268Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.380 -0.0001062 -0.0000469 728 5.07 -1.06 -1.71 2020-07-09 07:29:21.331161976 INFO 2024-04-09 23:15:40,273Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.377 0.0049915 0.0032196 10063 67.75 5.37 8.81 2020-07-09 08:37:06.958045959 INFO 2024-04-09 23:15:40,281Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.378 0.0003351 0.0002737 537 3.89 7.93 13.03 2020-07-09 08:41:00.997028112 INFO 2024-04-09 23:15:40,286Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.388 0.0077838 -0.0003105 9975 67.16 -0.51 -0.86 2020-07-09 09:48:11.099001884 INFO 2024-04-09 23:15:40,294Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.324 0.0000853 -0.0000837 159 1.09 -8.46 -14.18 2020-07-09 09:49:17.119246960 INFO 2024-04-09 23:15:40,299Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.348 0.0059273 0.0002901 9884 66.55 0.47 0.81 2020-07-09 10:55:50.438756943 INFO 2024-04-09 23:15:40,308Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.370 0.0000802 -0.0001122 325 2.38 -5.10 -8.72 2020-07-09 10:58:13.837219954 INFO 2024-04-09 23:15:40,313Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.358 0.0072823 -0.0030930 9396 63.26 -5.17 -9.06 2020-07-09 12:01:30.036487103 INFO 2024-04-09 23:15:40,321Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.371 0.0003428 -0.0003948 625 4.20 -9.94 -17.41 2020-07-09 12:05:42.560185909 INFO 2024-04-09 23:15:40,327Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.365 0.0055282 -0.0060709 10007 67.38 -9.30 -16.70 2020-07-09 13:13:05.582624912 INFO 2024-04-09 23:15:40,336Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 0.0006538 -0.0008618 1023 7.25 -12.25 -22.01 2020-07-09 13:20:21.230146885 INFO 2024-04-09 23:15:40,342Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.378 0.0065181 -0.0096191 10191 68.62 -14.15 -25.98 2020-07-09 14:28:58.573295116 INFO 2024-04-09 23:15:40,351Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.377 0.0006275 -0.0008293 1067 7.58 -11.03 -20.27 2020-07-09 14:36:33.794300079 INFO 2024-04-09 23:15:40,357Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.392 0.0031701 -0.0029355 3804 26.32 -11.27 -20.67 2020-07-09 15:02:53.366106033 INFO 2024-04-09 23:15:40,363Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.374 0.0003748 -0.0005807 983 6.75 -8.68 -15.93 2020-07-09 15:09:39.021147013 INFO 2024-04-09 23:15:40,367Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.372 0.0002032 -0.0002600 394 2.79 -9.41 -17.28 2020-07-09 15:12:26.665322065 INFO 2024-04-09 23:15:40,370Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.412 0.0001695 -0.0002098 265 1.98 -10.71 -19.68 2020-07-09 15:14:25.571713924 INFO 2024-04-09 23:15:40,374Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.375 0.0060594 -0.0043400 5376 36.19 -12.13 -22.22 2020-07-09 15:50:37.645219088 INFO 2024-04-09 23:15:40,380Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.371 0.0009596 -0.0011772 1748 12.46 -9.54 -17.51 2020-07-09 16:03:05.660499096 INFO 2024-04-09 23:15:40,384Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.385 0.0043346 -0.0056771 5250 35.34 -16.33 -29.76 2020-07-09 16:38:26.725384951 INFO 2024-04-09 23:15:40,389Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.375 0.0001234 -0.0000904 198 1.36 -6.78 -12.36 2020-07-09 16:39:48.445228100 INFO 2024-04-09 23:15:40,393Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.371 0.0006208 -0.0008708 919 6.69 -13.20 -24.11 2020-07-09 16:46:30.444199085 INFO 2024-04-09 23:15:40,397Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.377 0.0017463 -0.0035730 3156 21.25 -17.10 -31.16 2020-07-09 17:07:45.593110085 INFO 2024-04-09 23:15:40,401Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.366 0.0000120 -0.0001427 136 1.00 -14.48 -26.39 2020-07-09 17:08:46.108309984 INFO 2024-04-09 23:15:40,404Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.370 0.0021438 -0.0051920 3146 21.18 -24.97 -45.43 2020-07-09 17:29:57.133208036 INFO 2024-04-09 23:15:40,408Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.384 0.0002710 -0.0022858 1788 12.61 -18.41 -33.60 2020-07-09 17:42:33.936979055 INFO 2024-04-09 23:15:40,412Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.371 0.0016184 -0.0040769 3429 23.08 -17.97 -32.73 2020-07-09 18:05:39.348366976 INFO 2024-04-09 23:15:40,416Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.406 0.0005586 -0.0005277 177 1.25 -43.09 -78.48 2020-07-09 18:06:54.493046999 INFO 2024-04-09 23:15:40,419Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.374 0.0003863 -0.0057552 3391 22.83 -25.58 -46.72 2020-07-09 18:29:44.555645943 INFO 2024-04-09 23:15:40,423Z lrauvNc4ToNetcdf.py nudge_coords():871 39: - - - 477 3.32 - - INFO 2024-04-09 23:15:40,423Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 130959 INFO 2024-04-09 23:15:40,460Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200709T024223/20200709T193304/data.csv INFO 2024-04-09 23:15:40,564Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:15:40,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:15:40,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:15:40,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:41,055Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:41,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T034211/202007090342_202007091833_2S_scieng.nc INFO 2024-04-09 23:15:41,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007090342_202007091833.nc4 INFO 2024-04-09 23:15:42,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T183304/202007091833_202007100400.nc4 file... INFO 2024-04-09 23:15:42,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007091833_202007100400.nc4 INFO 2024-04-09 23:15:42,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T183304/202007091833_202007100400.nc4 INFO 2024-04-09 23:15:42,543Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:42,673Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:42,794Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:42,914Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,032Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,153Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,261Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,390Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,528Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,633Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,736Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,846Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:43,968Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,079Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,191Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,312Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:44,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:44,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:44,417Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:44,419Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 19 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:44,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:44,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:44,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:44,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:44,559Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 12 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:44,586Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 12 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:44,609Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 2 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:44,621Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 2 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:44,634Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 2 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,644Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:44,646Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 2 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:44,668Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 33 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:44,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:44,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:44,756Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:44,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:44,773Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:44,855Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:44,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:44,937Z lrauvNc4ToNetcdf.py createSeries():299 depth : 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:45,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:45,058Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:45,154Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:45,200Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:45,299Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:45,344Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 32 v_t values found before 2020-07-09 18:33:00 and after 2020-07-10 04:00:00 INFO 2024-04-09 23:15:45,438Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:45,439Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T183304/202007091833_202007100400.nc4 INFO 2024-04-09 23:15:45,676Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 83375 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:45,785Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 28 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T183304/202007091833_202007100400.nc4 INFO 2024-04-09 23:15:45,785Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:45,787Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:45,788Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.328 0.0006937 -0.0020615 1343 9.44 -22.06 -40.47 2020-07-09 18:43:35.577450991 INFO 2024-04-09 23:15:45,792Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.392 0.0001165 -0.0006225 381 2.59 -24.29 -44.59 2020-07-09 18:46:11.152075052 INFO 2024-04-09 23:15:45,795Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.357 -0.0014577 -0.0137920 9193 61.91 -22.22 -41.28 2020-07-09 19:48:05.982521057 INFO 2024-04-09 23:15:45,799Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.386 0.0000517 -0.0013315 841 6.00 -22.09 -41.12 2020-07-09 19:54:06.329858065 INFO 2024-04-09 23:15:45,803Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.299 0.0000663 -0.0004473 291 1.96 -22.75 -42.39 2020-07-09 19:56:04.039248943 INFO 2024-04-09 23:15:45,806Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.382 0.0006705 -0.0137700 8872 59.74 -23.00 -42.71 2020-07-09 20:55:48.636305094 INFO 2024-04-09 23:15:45,812Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.377 0.0006919 -0.0017373 1544 10.81 -15.98 -29.77 2020-07-09 21:06:37.829205036 INFO 2024-04-09 23:15:45,816Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.384 0.0000867 -0.0006629 502 3.51 -18.74 -34.95 2020-07-09 21:10:09.081969976 INFO 2024-04-09 23:15:45,820Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.372 0.0000702 -0.0005445 399 2.82 -19.16 -35.76 2020-07-09 21:12:58.779284 INFO 2024-04-09 23:15:45,823Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.376 -0.0006453 -0.0035941 3034 20.45 -17.59 -32.56 2020-07-09 21:33:26.335079908 INFO 2024-04-09 23:15:45,827Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.379 0.0002397 -0.0008872 601 4.36 -20.33 -37.70 2020-07-09 21:37:48.349832058 INFO 2024-04-09 23:15:45,830Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.372 0.0000315 -0.0003795 256 1.89 -20.08 -37.24 2020-07-09 21:39:42.032241106 INFO 2024-04-09 23:15:45,834Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.345 -0.0030882 -0.0174294 12887 86.77 -19.93 -37.22 2020-07-09 23:06:28.678219080 INFO 2024-04-09 23:15:45,840Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.370 -0.0000478 -0.0003708 223 1.61 -22.81 -42.62 2020-07-09 23:08:05.773397923 INFO 2024-04-09 23:15:45,844Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.378 0.0000182 -0.0000558 38 0.25 -22.21 -41.51 2020-07-09 23:08:21.117121935 INFO 2024-04-09 23:15:45,847Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.294 0.0001670 -0.0020832 1248 9.17 -22.45 -42.09 2020-07-09 23:17:31.797075033 INFO 2024-04-09 23:15:45,850Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.366 0.0000295 -0.0003302 186 1.39 -23.49 -44.06 2020-07-09 23:18:55.512480021 INFO 2024-04-09 23:15:45,854Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.379 -0.0023015 -0.0067311 5107 34.38 -19.62 -36.28 2020-07-09 23:53:18.841250896 INFO 2024-04-09 23:15:45,858Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.358 0.0000305 -0.0004720 231 1.72 -27.50 -50.89 2020-07-09 23:55:02.386460066 INFO 2024-04-09 23:15:45,863Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.387 -0.0005345 -0.0257551 21718 146.88 -17.22 -32.49 2020-07-10 02:21:55.416291952 INFO 2024-04-09 23:15:45,871Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.404 0.0008688 -0.0028500 1512 10.43 -26.71 -50.65 2020-07-10 02:32:21.456965923 INFO 2024-04-09 23:15:45,874Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.304 0.0006503 -0.0022810 1279 8.80 -25.23 -48.01 2020-07-10 02:41:10.076142073 INFO 2024-04-09 23:15:45,878Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.372 0.0006015 -0.0016997 887 5.97 -27.67 -52.79 2020-07-10 02:47:08.356214046 INFO 2024-04-09 23:15:45,881Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.373 0.0001847 -0.0005170 250 1.87 -26.87 -51.31 2020-07-10 02:49:00.796300888 INFO 2024-04-09 23:15:45,885Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.364 0.0000360 -0.0001835 96 0.64 -27.81 -53.13 2020-07-10 02:49:39.584556103 INFO 2024-04-09 23:15:45,889Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.368 0.0007435 -0.0068686 5352 36.03 -18.77 -35.32 2020-07-10 03:25:41.884399891 INFO 2024-04-09 23:15:45,894Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.384 0.0001155 -0.0004703 244 1.78 -25.93 -48.83 2020-07-10 03:27:29.358055115 INFO 2024-04-09 23:15:45,898Z lrauvNc4ToNetcdf.py nudge_coords():871 28: - - - 4859 32.71 - - INFO 2024-04-09 23:15:45,898Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 83374 INFO 2024-04-09 23:15:45,932Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200709T173304/20200710T050013/data.csv INFO 2024-04-09 23:15:46,032Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:46,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:46,442Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:46,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200709T183304/202007091833_202007100400_2S_scieng.nc INFO 2024-04-09 23:15:46,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007091833_202007100400.nc4 INFO 2024-04-09 23:15:47,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T040013/202007100400_202007101751.nc4 file... INFO 2024-04-09 23:15:47,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007100400_202007101751.nc4 INFO 2024-04-09 23:15:47,930Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T040013/202007100400_202007101751.nc4 INFO 2024-04-09 23:15:47,976Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,115Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,259Z lrauvNc4ToNetcdf.py createSeries():299 depth : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,402Z lrauvNc4ToNetcdf.py createSeries():299 time : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,538Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,656Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,780Z lrauvNc4ToNetcdf.py createSeries():299 depth : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:48,909Z lrauvNc4ToNetcdf.py createSeries():299 time : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,028Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,146Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,270Z lrauvNc4ToNetcdf.py createSeries():299 depth : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,391Z lrauvNc4ToNetcdf.py createSeries():299 time : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,530Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,669Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,796Z lrauvNc4ToNetcdf.py createSeries():299 depth : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:49,920Z lrauvNc4ToNetcdf.py createSeries():299 time : 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:50,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:50,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:50,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:50,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:50,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:50,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:50,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:50,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:50,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:50,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:50,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:50,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:50,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:50,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:50,371Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 92 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:50,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:50,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:50,468Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,474Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:50,479Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:50,496Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:50,609Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:50,718Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:50,861Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 91 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:50,995Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:51,047Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 91 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:51,166Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:51,215Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 91 v_t values found before 2020-07-10 04:00:00 and after 2020-07-10 17:51:00 INFO 2024-04-09 23:15:51,342Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:51,343Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T040013/202007100400_202007101751.nc4 INFO 2024-04-09 23:15:51,615Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 122658 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:51,726Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 29 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T040013/202007100400_202007101751.nc4 INFO 2024-04-09 23:15:51,727Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:51,729Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 356 2.39 - - - INFO 2024-04-09 23:15:51,730Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.365 0.0000200 -0.0008628 485 3.57 -24.05 -44.75 2020-07-10 04:07:30.697943926 INFO 2024-04-09 23:15:51,734Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 -0.0005194 -0.0092693 7913 53.28 -17.49 -32.24 2020-07-10 05:00:47.733289003 INFO 2024-04-09 23:15:51,738Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.380 -0.0000416 -0.0001231 83 0.61 -20.23 -37.29 2020-07-10 05:01:24.817296028 INFO 2024-04-09 23:15:51,742Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.373 -0.0001583 -0.0005938 365 2.59 -22.99 -42.42 2020-07-10 05:04:00.862777948 INFO 2024-04-09 23:15:51,746Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.355 -0.0140453 -0.0164577 14007 94.54 -17.29 -32.26 2020-07-10 06:38:33.865504980 INFO 2024-04-09 23:15:51,752Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.380 -0.0078191 -0.0108411 9920 66.79 -16.12 -30.08 2020-07-10 07:45:21.781388998 INFO 2024-04-09 23:15:51,758Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.389 -0.0001677 -0.0003142 348 2.54 -12.30 -22.96 2020-07-10 07:47:54.296933889 INFO 2024-04-09 23:15:51,762Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.380 -0.0072771 -0.0072672 9578 64.49 -11.26 -20.88 2020-07-10 08:52:23.977128983 INFO 2024-04-09 23:15:51,767Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.378 -0.0000235 -0.0003028 446 3.20 -9.45 -17.53 2020-07-10 08:55:36.417021036 INFO 2024-04-09 23:15:51,771Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.390 -0.0047086 -0.0051134 9908 66.71 -7.73 -14.20 2020-07-10 10:02:19.411813021 INFO 2024-04-09 23:15:51,777Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.395 0.0000720 -0.0001462 260 1.91 -7.71 -14.15 2020-07-10 10:04:14.636926889 INFO 2024-04-09 23:15:51,781Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.370 -0.0028253 -0.0034762 9811 66.06 -5.39 -9.75 2020-07-10 11:10:18.461147070 INFO 2024-04-09 23:15:51,787Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.364 0.0000465 -0.0001548 226 1.69 -9.40 -17.02 2020-07-10 11:12:00.039899111 INFO 2024-04-09 23:15:51,790Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.351 -0.0017377 -0.0018767 9586 64.54 -3.03 -5.39 2020-07-10 12:16:32.985140085 INFO 2024-04-09 23:15:51,796Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.358 0.0000188 -0.0001288 445 3.23 -4.16 -7.40 2020-07-10 12:19:46.908480883 INFO 2024-04-09 23:15:51,800Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 -0.0031268 -0.0012255 10000 67.33 -1.93 -3.37 2020-07-10 13:27:07.036236048 INFO 2024-04-09 23:15:51,805Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.385 0.0000638 0.0000278 120 0.86 3.45 6.01 2020-07-10 13:27:58.918253899 INFO 2024-04-09 23:15:51,809Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.384 0.0012853 -0.0000471 10035 67.57 -0.08 -0.13 2020-07-10 14:35:33.260303020 INFO 2024-04-09 23:15:51,815Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.321 0.0000263 -0.0000228 343 2.50 -0.99 -1.68 2020-07-10 14:38:03.789946079 INFO 2024-04-09 23:15:51,820Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 0.0009125 -0.0001208 9735 65.55 -0.20 -0.34 2020-07-10 15:43:36.837124109 INFO 2024-04-09 23:15:51,826Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.379 0.0003516 -0.0000173 792 5.41 -0.35 -0.59 2020-07-10 15:49:02.029117107 INFO 2024-04-09 23:15:51,830Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.379 0.0003655 0.0000122 809 5.73 0.23 0.39 2020-07-10 15:54:46.009042978 INFO 2024-04-09 23:15:51,834Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.370 0.0020741 -0.0034724 10332 70.04 -5.52 -9.19 2020-07-10 17:04:48.861166 INFO 2024-04-09 23:15:51,841Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.403 0.0002343 0.0006273 1335 9.01 7.75 12.90 2020-07-10 17:13:49.943947077 INFO 2024-04-09 23:15:51,845Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.395 0.0000423 -0.0000015 81 0.54 -0.31 -0.51 2020-07-10 17:14:22.933500051 INFO 2024-04-09 23:15:51,848Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.409 0.0000162 -0.0000070 23 0.16 -4.98 -8.30 2020-07-10 17:14:32.896294117 INFO 2024-04-09 23:15:51,852Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.384 0.0017092 -0.0001293 2781 19.25 -0.75 -1.24 2020-07-10 17:33:48.437186003 INFO 2024-04-09 23:15:51,855Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.362 0.0011833 -0.0003785 1458 10.23 -4.12 -6.86 2020-07-10 17:44:02.362370014 INFO 2024-04-09 23:15:51,859Z lrauvNc4ToNetcdf.py nudge_coords():871 29: - - - 1076 7.61 - - INFO 2024-04-09 23:15:51,859Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 122657 INFO 2024-04-09 23:15:51,894Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200710T030013/20200710T185139/data.csv INFO 2024-04-09 23:15:51,993Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:52,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:52,514Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:52,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T040013/202007100400_202007101751_2S_scieng.nc INFO 2024-04-09 23:15:52,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007100400_202007101751.nc4 INFO 2024-04-09 23:15:53,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T175141/202007101751_202007101820.nc4 file... INFO 2024-04-09 23:15:53,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202007101751_202007101820.nc4 INFO 2024-04-09 23:15:53,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T175141/202007101751_202007101820.nc4 INFO 2024-04-09 23:15:53,630Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,686Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,744Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,799Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,856Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,909Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:53,966Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,020Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,075Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,128Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,182Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,241Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,299Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,352Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,407Z lrauvNc4ToNetcdf.py createSeries():299 depth : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,463Z lrauvNc4ToNetcdf.py createSeries():299 time : 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:54,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:54,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:54,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:54,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:54,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:54,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:54,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:54,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:54,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:15:54,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:15:54,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:54,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:15:54,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:54,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:15:54,543Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 84 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:15:54,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:15:54,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:15:54,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:15:54,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:15:54,574Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:54,584Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:54,595Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:15:54,631Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 81 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,673Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:54,691Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 81 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,732Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:54,750Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 81 v_t values found before 2020-07-10 17:51:00 and after 2020-07-10 18:20:00 INFO 2024-04-09 23:15:54,793Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:15:54,794Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T175141/202007101751_202007101820.nc4 INFO 2024-04-09 23:15:54,885Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 3056 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:15:54,972Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T175141/202007101751_202007101820.nc4 INFO 2024-04-09 23:15:54,972Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:15:54,973Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:15:54,974Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 0.0014275 -0.0005517 1450 9.90 -6.19 -10.33 2020-07-10 18:09:19.094444036 INFO 2024-04-09 23:15:54,976Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 1605 11.28 - - INFO 2024-04-09 23:15:54,977Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 3055 INFO 2024-04-09 23:15:54,995Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200710T165153/20200710T192037/data.csv INFO 2024-04-09 23:15:55,093Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:15:55,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:15:55,377Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:15:55,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200706_20200710/20200710T175141/202007101751_202007101820_2S_scieng.nc INFO 2024-04-09 23:15:55,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202007101751_202007101820.nc4 INFO 2024-04-09 23:15:56,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200831T215501/202008312155_202009011732.nc4 file... INFO 2024-04-09 23:15:56,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202008312155_202009011732.nc4 INFO 2024-04-09 23:15:57,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200831T215501/202008312155_202009011732.nc4 INFO 2024-04-09 23:15:57,095Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:57,270Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:57,441Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:57,632Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:57,794Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:57,936Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,077Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,223Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,364Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,508Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,654Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,808Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:58,954Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:59,092Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:59,238Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:59,401Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:15:59,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:15:59,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:15:59,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:15:59,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:15:59,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:15:59,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:15:59,590Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:15:59,626Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:15:59,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:15:59,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:15:59,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:15:59,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:15:59,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:15:59,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:15:59,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:15:59,947Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:00,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:00,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:00,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:00,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:00,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:00,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:00,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:00,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:00,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:00,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:00,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:00,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:00,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:00,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:00,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:00,836Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:00,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:00,990Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:01,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:01,144Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:01,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:01,331Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 67 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:02,094Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:02,150Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 67 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:02,897Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:02,955Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 67 v_t values found before 2020-08-31 21:55:00 and after 2020-09-01 17:32:00 INFO 2024-04-09 23:16:03,720Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:03,721Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200831T215501/202008312155_202009011732.nc4 INFO 2024-04-09 23:16:04,048Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 173793 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:04,165Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 48 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200831T215501/202008312155_202009011732.nc4 INFO 2024-04-09 23:16:04,165Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:04,168Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 410 2.75 - - - INFO 2024-04-09 23:16:04,170Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.403 0.0000300 0.0000201 182 1.22 1.91 3.05 2020-08-31 21:59:00.848402023 INFO 2024-04-09 23:16:04,173Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.388 -0.0000445 0.0000169 712 4.88 0.40 0.64 2020-08-31 22:03:53.810053110 INFO 2024-04-09 23:16:04,177Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.393 0.0009189 -0.0008891 3279 22.08 -4.65 -7.46 2020-08-31 22:25:58.733361006 INFO 2024-04-09 23:16:04,181Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.368 -0.0000078 0.0000093 325 2.45 0.44 0.71 2020-08-31 22:28:25.865303993 INFO 2024-04-09 23:16:04,184Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.411 0.0005516 -0.0007845 3142 21.15 -4.28 -6.87 2020-08-31 22:49:35.340919971 INFO 2024-04-09 23:16:04,188Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.343 -0.0000183 -0.0000189 300 2.22 -0.98 -1.58 2020-08-31 22:51:48.969063997 INFO 2024-04-09 23:16:04,192Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.390 0.0015903 -0.0003264 3103 20.89 -1.80 -2.90 2020-08-31 23:12:42.609023094 INFO 2024-04-09 23:16:04,196Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.371 -0.0000517 0.0000162 209 1.55 1.20 1.93 2020-08-31 23:14:16.114428043 INFO 2024-04-09 23:16:04,200Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.326 0.0017705 0.0006562 2123 14.29 5.28 8.51 2020-08-31 23:28:33.917093992 INFO 2024-04-09 23:16:04,205Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.367 0.0001965 0.0001046 180 1.35 8.92 14.36 2020-08-31 23:29:55.276405096 INFO 2024-04-09 23:16:04,209Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.326 0.0006780 0.0021792 6637 44.69 5.64 9.04 2020-09-01 00:14:36.880637884 INFO 2024-04-09 23:16:04,213Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.390 0.0000798 0.0000427 313 2.42 2.04 3.27 2020-09-01 00:17:02.279025078 INFO 2024-04-09 23:16:04,217Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.381 -0.0000207 -0.0000113 17 0.11 -12.14 -19.46 2020-09-01 00:17:09.152460098 INFO 2024-04-09 23:16:04,221Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.392 -0.0000058 0.0000191 68 0.51 4.33 6.94 2020-09-01 00:17:40.072935104 INFO 2024-04-09 23:16:04,226Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.378 0.0029464 0.0075113 9098 61.26 14.31 22.72 2020-09-01 01:18:55.893177986 INFO 2024-04-09 23:16:04,233Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.406 -0.0001580 0.0000647 271 2.08 3.63 5.77 2020-09-01 01:21:00.913386106 INFO 2024-04-09 23:16:04,238Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.379 0.0007145 0.0073343 9420 63.43 13.22 21.43 2020-09-01 02:24:26.845242023 INFO 2024-04-09 23:16:04,245Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.328 -0.0009005 0.0007525 340 2.60 33.07 53.59 2020-09-01 02:27:03.372153997 INFO 2024-04-09 23:16:04,249Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.377 -0.0003329 0.0038284 9232 62.16 6.86 11.41 2020-09-01 03:29:13.301120996 INFO 2024-04-09 23:16:04,256Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.359 0.0000635 -0.0001548 341 2.64 -6.53 -10.87 2020-09-01 03:31:52.051687956 INFO 2024-04-09 23:16:04,261Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.370 0.0025353 -0.0006694 9327 62.80 -1.15 -1.98 2020-09-01 04:34:40.405215025 INFO 2024-04-09 23:16:04,268Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.346 -0.0000295 0.0000136 253 1.82 0.81 1.38 2020-09-01 04:36:29.786034107 INFO 2024-04-09 23:16:04,273Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.384 0.0000032 -0.0000311 11 0.07 -50.46 -86.50 2020-09-01 04:36:34.200237036 INFO 2024-04-09 23:16:04,277Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.383 -0.0000896 -0.0000819 637 4.80 -1.84 -3.16 2020-09-01 04:41:22.873101950 INFO 2024-04-09 23:16:04,281Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.361 0.0000483 0.0005045 9677 65.16 0.81 1.43 2020-09-01 05:46:32.687659979 INFO 2024-04-09 23:16:04,288Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.376 0.0000177 -0.0000552 466 3.66 -1.59 -2.80 2020-09-01 05:50:12.601331949 INFO 2024-04-09 23:16:04,293Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.408 0.0005653 -0.0004775 8974 60.42 -0.81 -1.46 2020-09-01 06:50:38.317164898 INFO 2024-04-09 23:16:04,300Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.379 0.0000515 -0.0000174 431 3.34 -0.53 -0.97 2020-09-01 06:53:59.121105909 INFO 2024-04-09 23:16:04,305Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.378 0.0001583 -0.0000785 9044 60.89 -0.13 -0.24 2020-09-01 07:54:53.217299938 INFO 2024-04-09 23:16:04,312Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.364 0.0000009 0.0000260 585 4.51 0.57 1.07 2020-09-01 07:59:24.329369068 INFO 2024-04-09 23:16:04,317Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.363 0.0010215 0.0003424 8956 60.30 0.57 1.05 2020-09-01 08:59:42.932378054 INFO 2024-04-09 23:16:04,324Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.396 0.0000110 0.0000144 522 3.86 0.37 0.69 2020-09-01 09:03:35.069494963 INFO 2024-04-09 23:16:04,329Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.411 0.0017087 0.0003609 9866 66.43 0.54 1.01 2020-09-01 10:10:01.134792089 INFO 2024-04-09 23:16:04,336Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.353 0.0000558 0.0000259 441 3.47 0.74 1.39 2020-09-01 10:13:29.465504885 INFO 2024-04-09 23:16:04,341Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.373 0.0010515 0.0002945 8972 60.41 0.49 0.90 2020-09-01 11:13:54.412014008 INFO 2024-04-09 23:16:04,348Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.359 0.0000207 0.0000126 403 3.18 0.40 0.74 2020-09-01 11:17:05.692678928 INFO 2024-04-09 23:16:04,353Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.362 0.0012710 0.0003516 9867 66.44 0.53 0.98 2020-09-01 12:23:32.192603111 INFO 2024-04-09 23:16:04,360Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.381 -0.0000317 0.0000294 531 3.86 0.76 1.41 2020-09-01 12:27:24.456906080 INFO 2024-04-09 23:16:04,365Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.387 0.0009992 0.0005752 9859 66.38 0.87 1.61 2020-09-01 13:33:47.861279011 INFO 2024-04-09 23:16:04,373Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.369 0.0000141 -0.0000110 509 3.86 -0.29 -0.53 2020-09-01 13:37:40.139322042 INFO 2024-04-09 23:16:04,379Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.368 0.0010172 0.0002274 8939 60.19 0.37 0.70 2020-09-01 14:37:51.767612934 INFO 2024-04-09 23:16:04,387Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.375 0.0000129 0.0000253 455 3.52 0.71 1.33 2020-09-01 14:41:23.375612974 INFO 2024-04-09 23:16:04,392Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.374 0.0009226 0.0004890 10031 67.54 0.72 1.34 2020-09-01 15:48:56.362335920 INFO 2024-04-09 23:16:04,399Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.362 0.0000874 0.0000128 452 3.25 0.40 0.73 2020-09-01 15:52:11.449934006 INFO 2024-04-09 23:16:04,404Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.343 0.0007580 0.0001126 12474 83.99 0.13 0.25 2020-09-01 17:16:11.383668900 INFO 2024-04-09 23:16:04,412Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.369 0.0000049 -0.0000058 840 5.71 -0.10 -0.19 2020-09-01 17:21:54.127731085 INFO 2024-04-09 23:16:04,416Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.364 0.0000461 0.0000037 885 5.95 0.06 0.12 2020-09-01 17:27:51.667973995 INFO 2024-04-09 23:16:04,420Z lrauvNc4ToNetcdf.py nudge_coords():871 48: - - - 683 4.59 - - INFO 2024-04-09 23:16:04,421Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 173792 INFO 2024-04-09 23:16:04,459Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200831T205501/20200901T183227/data.csv INFO 2024-04-09 23:16:04,565Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:16:04,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:16:04,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:16:04,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:05,393Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:05,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200831T215501/202008312155_202009011732_2S_scieng.nc INFO 2024-04-09 23:16:05,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202008312155_202009011732.nc4 INFO 2024-04-09 23:16:06,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T173228/202009011732_202009012044.nc4 file... INFO 2024-04-09 23:16:06,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009011732_202009012044.nc4 INFO 2024-04-09 23:16:06,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T173228/202009011732_202009012044.nc4 INFO 2024-04-09 23:16:06,766Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:06,858Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:06,954Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,061Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,141Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,227Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,306Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,384Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,460Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,536Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,615Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,696Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,780Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,857Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:07,935Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,011Z lrauvNc4ToNetcdf.py createSeries():299 time : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:08,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:08,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:08,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:08,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:08,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:08,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:08,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:08,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:08,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:08,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:08,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:08,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:08,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:08,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:08,179Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:08,219Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:08,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:08,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:08,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:08,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:08,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:08,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:08,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:08,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:08,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:08,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:08,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:08,358Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:08,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:08,367Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:08,403Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:08,438Z lrauvNc4ToNetcdf.py createSeries():299 depth : 100 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:08,509Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 98 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,582Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:08,620Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 98 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,686Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:08,721Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 98 v_t values found before 2020-09-01 17:32:00 and after 2020-09-01 20:44:00 INFO 2024-04-09 23:16:08,786Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:08,787Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T173228/202009011732_202009012044.nc4 INFO 2024-04-09 23:16:08,934Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 28491 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:09,035Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 10 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T173228/202009011732_202009012044.nc4 INFO 2024-04-09 23:16:09,035Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:09,037Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 183 1.23 - - - INFO 2024-04-09 23:16:09,038Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.380 0.0000379 -0.0000008 1094 7.36 -0.01 -0.02 2020-09-01 17:41:03.960010052 INFO 2024-04-09 23:16:09,040Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.390 0.0000478 -0.0000211 1093 7.35 -0.29 -0.53 2020-09-01 17:48:25.568963051 INFO 2024-04-09 23:16:09,043Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.395 -0.0000013 0.0000181 1238 8.36 0.22 0.40 2020-09-01 17:56:47.436209917 INFO 2024-04-09 23:16:09,045Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.370 0.0000548 0.0000157 904 6.08 0.26 0.48 2020-09-01 18:02:52.857153893 INFO 2024-04-09 23:16:09,047Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.352 0.0000125 0.0000231 826 5.56 0.42 0.77 2020-09-01 18:08:26.639710903 INFO 2024-04-09 23:16:09,050Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.367 0.0000461 -0.0000029 846 5.69 -0.05 -0.09 2020-09-01 18:14:08.705347061 INFO 2024-04-09 23:16:09,052Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.384 -0.0000108 -0.0000012 707 4.75 -0.03 -0.05 2020-09-01 18:18:54.365283012 INFO 2024-04-09 23:16:09,054Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.400 0.0000216 0.0000046 272 1.82 0.26 0.47 2020-09-01 18:20:44.272084951 INFO 2024-04-09 23:16:09,057Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.352 0.0021978 0.0013977 20936 141.00 1.00 1.84 2020-09-01 20:41:44.816673040 INFO 2024-04-09 23:16:09,064Z lrauvNc4ToNetcdf.py nudge_coords():871 10: - - - 391 2.91 - - INFO 2024-04-09 23:16:09,064Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 28490 INFO 2024-04-09 23:16:09,093Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200901T163228/20200901T214440/data.csv INFO 2024-04-09 23:16:09,192Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:09,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:09,831Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:10,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T173228/202009011732_202009012044_2S_scieng.nc INFO 2024-04-09 23:16:10,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009011732_202009012044.nc4 INFO 2024-04-09 23:16:10,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T204440/202009012044_202009012052.nc4 file... INFO 2024-04-09 23:16:10,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009012044_202009012052.nc4 INFO 2024-04-09 23:16:10,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T204440/202009012044_202009012052.nc4 INFO 2024-04-09 23:16:10,924Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:10,989Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,052Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,122Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,185Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,248Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,311Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,373Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,434Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,496Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,556Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,618Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,681Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,743Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,805Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,866Z lrauvNc4ToNetcdf.py createSeries():299 time : 108 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:11,915Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:11,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:11,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:11,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping INFO 2024-04-09 23:16:11,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:16:11,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:16:11,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping INFO 2024-04-09 23:16:11,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping INFO 2024-04-09 23:16:11,930Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:16:11,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:16:11,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:11,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:11,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:11,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:11,939Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 108 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,944Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:11,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:11,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:16:11,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:16:11,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:16:11,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:16:11,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:16:11,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:11,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:11,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:11,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:11,977Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:11,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:16:11,980Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:11,987Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:11,993Z lrauvNc4ToNetcdf.py createSeries():299 depth : 107 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:11,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:12,026Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 105 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:13,009Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:13,030Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 105 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:14,035Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:14,056Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 106 v_t values found before 2020-09-01 20:44:00 and after 2020-09-01 20:52:00 INFO 2024-04-09 23:16:15,052Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:15,053Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T204440/202009012044_202009012052.nc4 INFO 2024-04-09 23:16:15,155Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1195 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:15,260Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T204440/202009012044_202009012052.nc4 INFO 2024-04-09 23:16:15,260Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:15,262Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 735 4.94 - - - INFO 2024-04-09 23:16:15,262Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 459 3.08 - - INFO 2024-04-09 23:16:15,263Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1194 INFO 2024-04-09 23:16:15,283Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200901T194440/20200901T215243/data.csv INFO 2024-04-09 23:16:15,381Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:15,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:15,741Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:16,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T204440/202009012044_202009012052_2S_scieng.nc INFO 2024-04-09 23:16:16,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009012044_202009012052.nc4 INFO 2024-04-09 23:16:16,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T205451/202009012055_202009012106.nc4 file... INFO 2024-04-09 23:16:16,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009012055_202009012106.nc4 INFO 2024-04-09 23:16:19,751Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T205451/202009012055_202009012106.nc4 INFO 2024-04-09 23:16:19,789Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:19,851Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:19,905Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:19,958Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,011Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,074Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,126Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,180Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,237Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,293Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,353Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,414Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,471Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,522Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,578Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,634Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:20,676Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:20,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:20,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:20,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:20,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:20,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:20,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:20,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:20,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:16:20,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:16:20,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:20,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:20,706Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:20,708Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:20,709Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:20,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:20,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:20,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:20,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:20,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:20,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:20,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:20,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:20,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:20,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:20,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:20,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:16:20,763Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:20,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:20,777Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:20,810Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 110 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,851Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:20,876Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 110 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,927Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:20,946Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 110 v_t values found before 2020-09-01 20:55:00 and after 2020-09-01 21:06:00 INFO 2024-04-09 23:16:20,988Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:20,988Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T205451/202009012055_202009012106.nc4 INFO 2024-04-09 23:16:21,102Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1456 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:21,200Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T205451/202009012055_202009012106.nc4 INFO 2024-04-09 23:16:21,200Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:21,201Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:16:21,202Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.377 0.0000129 0.0000070 167 1.29 0.55 1.01 2020-09-01 20:57:57.722302914 INFO 2024-04-09 23:16:21,204Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.384 -0.0000060 -0.0000006 903 6.20 -0.01 -0.02 2020-09-01 21:04:09.814259052 INFO 2024-04-09 23:16:21,206Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 385 2.59 - - INFO 2024-04-09 23:16:21,206Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1455 INFO 2024-04-09 23:16:21,230Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200901T195504/20200901T220645/data.csv INFO 2024-04-09 23:16:21,333Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:21,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:21,541Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:21,650Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T205451/202009012055_202009012106_2S_scieng.nc INFO 2024-04-09 23:16:21,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009012055_202009012106.nc4 INFO 2024-04-09 23:16:22,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T210742/202009012107_202009012323.nc4 file... INFO 2024-04-09 23:16:22,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009012107_202009012323.nc4 INFO 2024-04-09 23:16:22,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T210742/202009012107_202009012323.nc4 INFO 2024-04-09 23:16:22,597Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:22,687Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:22,774Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:22,867Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:22,960Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,049Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,133Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,211Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,290Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,371Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,465Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,552Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,631Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,710Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,791Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,877Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:23,944Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:23,955Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:23,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:23,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:23,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:23,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:23,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:23,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:24,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:24,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:24,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:24,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:24,046Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:24,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:24,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:24,060Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:24,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:24,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:24,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:24,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:24,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:24,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:24,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:24,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:24,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:24,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:24,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:24,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:24,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:24,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:24,234Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:24,261Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:24,288Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:24,353Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 9 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,425Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:24,466Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 9 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,530Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:24,565Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 9 v_t values found before 2020-09-01 21:07:00 and after 2020-09-01 23:23:00 INFO 2024-04-09 23:16:24,626Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:24,627Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T210742/202009012107_202009012323.nc4 INFO 2024-04-09 23:16:24,777Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 19553 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:24,892Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T210742/202009012107_202009012323.nc4 INFO 2024-04-09 23:16:24,893Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:24,894Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:16:24,894Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.358 -0.0000599 0.0000178 70 0.49 3.64 6.67 2020-09-01 21:11:52.137922049 INFO 2024-04-09 23:16:24,897Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.375 0.0000207 0.0000089 517 3.48 0.26 0.47 2020-09-01 21:15:21.252218008 INFO 2024-04-09 23:16:24,899Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.351 -0.0000038 0.0000192 121 0.81 2.41 4.41 2020-09-01 21:16:10.161144972 INFO 2024-04-09 23:16:24,902Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.371 0.0006214 0.0007946 18428 124.09 0.64 1.19 2020-09-01 23:20:15.844153881 INFO 2024-04-09 23:16:24,908Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 416 2.80 - - INFO 2024-04-09 23:16:24,908Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 19552 INFO 2024-04-09 23:16:24,941Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200901T200754/20200902T002304/data.csv INFO 2024-04-09 23:16:25,040Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:25,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:25,336Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:25,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T210742/202009012107_202009012323_2S_scieng.nc INFO 2024-04-09 23:16:25,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009012107_202009012323.nc4 INFO 2024-04-09 23:16:26,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T232304/202009012323_202009020358.nc4 file... INFO 2024-04-09 23:16:26,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009012323_202009020358.nc4 INFO 2024-04-09 23:16:26,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T232304/202009012323_202009020358.nc4 INFO 2024-04-09 23:16:26,636Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:26,739Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:26,858Z lrauvNc4ToNetcdf.py createSeries():299 depth : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:26,973Z lrauvNc4ToNetcdf.py createSeries():299 time : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,075Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,178Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,268Z lrauvNc4ToNetcdf.py createSeries():299 depth : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,356Z lrauvNc4ToNetcdf.py createSeries():299 time : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,437Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,533Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,633Z lrauvNc4ToNetcdf.py createSeries():299 depth : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,721Z lrauvNc4ToNetcdf.py createSeries():299 time : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,802Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,890Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:27,983Z lrauvNc4ToNetcdf.py createSeries():299 depth : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,072Z lrauvNc4ToNetcdf.py createSeries():299 time : 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:28,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:28,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:28,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:28,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:28,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:28,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:28,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:28,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:28,263Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:28,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:28,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:28,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:28,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:28,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:28,321Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 134 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:28,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:28,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:28,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:28,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:28,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:28,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:28,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:28,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:28,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:28,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:28,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:28,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:28,604Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:28,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:28,620Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:28,670Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:28,719Z lrauvNc4ToNetcdf.py createSeries():299 depth : 133 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:28,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:28,801Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 132 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:30,169Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:30,206Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 132 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:31,557Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:31,598Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 132 v_t values found before 2020-09-01 23:23:00 and after 2020-09-02 03:58:00 INFO 2024-04-09 23:16:32,965Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:32,966Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T232304/202009012323_202009020358.nc4 INFO 2024-04-09 23:16:33,145Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 40873 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:33,251Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 12 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T232304/202009012323_202009020358.nc4 INFO 2024-04-09 23:16:33,252Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:33,253Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 411 2.76 - - - INFO 2024-04-09 23:16:33,254Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.380 0.0000516 -0.0000236 627 4.22 -0.56 -1.04 2020-09-01 23:30:03.857325077 INFO 2024-04-09 23:16:33,256Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.394 0.0000312 0.0000281 82 0.55 5.17 9.54 2020-09-01 23:30:37.008737087 INFO 2024-04-09 23:16:33,259Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.375 0.0007942 0.0003264 9396 63.27 0.51 0.96 2020-09-02 00:33:53.364700079 INFO 2024-04-09 23:16:33,264Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.375 0.0000755 0.0000194 316 2.53 0.77 1.42 2020-09-02 00:36:25.409315109 INFO 2024-04-09 23:16:33,267Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.379 0.0008710 0.0001555 15306 103.06 0.15 0.28 2020-09-02 02:19:29.408128977 INFO 2024-04-09 23:16:33,272Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.383 0.0000515 -0.0000368 955 6.54 -0.56 -1.04 2020-09-02 02:26:02.052170038 INFO 2024-04-09 23:16:33,275Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.371 0.0000376 -0.0000173 819 5.51 -0.31 -0.58 2020-09-02 02:31:32.948204041 INFO 2024-04-09 23:16:33,278Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.375 0.0000061 0.0000017 818 5.50 0.03 0.06 2020-09-02 02:37:03.436230898 INFO 2024-04-09 23:16:33,281Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.363 0.0000308 0.0000020 839 5.64 0.04 0.07 2020-09-02 02:42:42.408405066 INFO 2024-04-09 23:16:33,284Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.349 0.0000292 -0.0000328 818 5.50 -0.59 -1.10 2020-09-02 02:48:12.899095058 INFO 2024-04-09 23:16:33,287Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.347 0.0004679 0.0001754 10095 67.98 0.26 0.48 2020-09-02 03:56:12.080782890 INFO 2024-04-09 23:16:33,293Z lrauvNc4ToNetcdf.py nudge_coords():871 12: - - - 390 2.68 - - INFO 2024-04-09 23:16:33,293Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 40872 INFO 2024-04-09 23:16:33,324Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200901T222304/20200902T045854/data.csv INFO 2024-04-09 23:16:33,421Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:33,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:33,791Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:34,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200901T232304/202009012323_202009020358_2S_scieng.nc INFO 2024-04-09 23:16:34,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009012323_202009020358.nc4 INFO 2024-04-09 23:16:35,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/202009020358_202009022142.nc4 file... INFO 2024-04-09 23:16:35,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009020358_202009022142.nc4 INFO 2024-04-09 23:16:35,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/202009020358_202009022142.nc4 INFO 2024-04-09 23:16:35,859Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,032Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,215Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,386Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,553Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,696Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,843Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:36,987Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,129Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,269Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,413Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,558Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,710Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:37,861Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,008Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,154Z lrauvNc4ToNetcdf.py createSeries():299 time : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:38,292Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:38,300Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:38,307Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:38,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:38,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:38,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:38,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:38,474Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:38,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:38,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:38,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:38,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:38,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:38,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:38,655Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:38,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:38,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:38,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:38,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:39,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:39,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:39,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:39,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:39,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:39,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:39,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:39,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:39,337Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:39,338Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:39,345Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:39,371Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:39,519Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:39,663Z lrauvNc4ToNetcdf.py createSeries():299 depth : 85 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:39,842Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 83 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:39,982Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:40,044Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 83 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:40,226Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:40,285Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 83 v_t values found before 2020-09-02 03:58:00 and after 2020-09-02 21:42:00 INFO 2024-04-09 23:16:40,446Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:40,448Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/202009020358_202009022142.nc4 INFO 2024-04-09 23:16:40,771Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 157304 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:40,916Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 41 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/202009020358_202009022142.nc4 INFO 2024-04-09 23:16:40,917Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:40,919Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 247 1.66 - - - INFO 2024-04-09 23:16:40,921Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.363 0.0000290 -0.0000094 259 1.74 -0.54 -1.00 2020-09-02 04:02:18.401499033 INFO 2024-04-09 23:16:40,925Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0040157 0.0024979 9804 66.01 3.91 7.01 2020-09-02 05:08:19.505455016 INFO 2024-04-09 23:16:40,931Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.364 -0.0001837 0.0000276 88 0.62 4.59 8.23 2020-09-02 05:08:57.139909983 INFO 2024-04-09 23:16:40,935Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.356 0.0000003 0.0000009 8 0.05 2.05 3.67 2020-09-02 05:09:00.377742052 INFO 2024-04-09 23:16:40,939Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.361 0.0000239 0.0000230 294 2.00 1.19 2.13 2020-09-02 05:11:00.857315063 INFO 2024-04-09 23:16:40,943Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.371 0.0028597 0.0010817 9615 64.74 1.68 3.10 2020-09-02 06:15:45.552294016 INFO 2024-04-09 23:16:40,949Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.384 -0.0000006 -0.0000224 447 3.44 -0.66 -1.21 2020-09-02 06:19:12.370938063 INFO 2024-04-09 23:16:40,953Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.371 0.0009388 0.0003018 9893 66.61 0.46 0.84 2020-09-02 07:25:49.372757912 INFO 2024-04-09 23:16:40,960Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.371 0.0000351 -0.0000214 337 2.58 -0.83 -1.54 2020-09-02 07:28:24.833323956 INFO 2024-04-09 23:16:40,964Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.362 0.0010881 0.0003785 9911 66.73 0.57 1.05 2020-09-02 08:35:09.216485977 INFO 2024-04-09 23:16:40,970Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.329 -0.0000072 -0.0000021 388 2.99 -0.07 -0.13 2020-09-02 08:38:08.923223019 INFO 2024-04-09 23:16:40,974Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.378 0.0011808 0.0004393 9971 67.14 0.66 1.21 2020-09-02 09:45:17.729039907 INFO 2024-04-09 23:16:40,980Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.301 0.0000145 0.0000129 295 2.27 0.57 1.06 2020-09-02 09:47:34.252027987 INFO 2024-04-09 23:16:40,985Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.384 0.0011652 0.0005926 9697 65.29 0.91 1.68 2020-09-02 10:52:52.091072083 INFO 2024-04-09 23:16:40,992Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.381 0.0000000 0.0000111 473 3.65 0.31 0.56 2020-09-02 10:56:31.704502106 INFO 2024-04-09 23:16:40,996Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.361 0.0010030 0.0004738 9754 65.67 0.72 1.34 2020-09-02 12:02:12.558563948 INFO 2024-04-09 23:16:41,003Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.370 -0.0000604 0.0000173 436 3.40 0.51 0.94 2020-09-02 12:05:36.667548895 INFO 2024-04-09 23:16:41,007Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.369 0.0009899 0.0006090 9722 65.46 0.93 1.72 2020-09-02 13:11:04.827286959 INFO 2024-04-09 23:16:41,013Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.348 0.0000180 0.0000090 89 0.63 1.45 2.67 2020-09-02 13:11:42.836905956 INFO 2024-04-09 23:16:41,017Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.362 0.0000018 0.0000017 10 0.06 2.87 5.29 2020-09-02 13:11:46.860467911 INFO 2024-04-09 23:16:41,021Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.388 0.0000296 0.0000087 433 3.11 0.28 0.52 2020-09-02 13:14:53.904660940 INFO 2024-04-09 23:16:41,025Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.350 0.0007642 -0.0000969 9776 65.83 -0.14 -0.27 2020-09-02 14:20:43.884536028 INFO 2024-04-09 23:16:41,031Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.431 0.0000022 0.0000033 42 0.27 1.17 2.23 2020-09-02 14:21:00.795844078 INFO 2024-04-09 23:16:41,035Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.393 -0.0000011 0.0000008 41 0.31 0.25 0.48 2020-09-02 14:21:19.629055977 INFO 2024-04-09 23:16:41,038Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.348 0.0000142 0.0000058 469 3.52 0.16 0.30 2020-09-02 14:24:51.444823027 INFO 2024-04-09 23:16:41,043Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.370 0.0000477 0.0000049 5017 33.78 0.01 0.03 2020-09-02 14:58:38.397228956 INFO 2024-04-09 23:16:41,049Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.383 0.0000738 -0.0000022 1091 7.65 -0.03 -0.05 2020-09-02 15:06:17.801044941 INFO 2024-04-09 23:16:41,053Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.371 0.0000267 -0.0000023 819 5.51 -0.04 -0.08 2020-09-02 15:11:48.688133955 INFO 2024-04-09 23:16:41,058Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.393 0.0000497 -0.0000089 821 5.53 -0.16 -0.30 2020-09-02 15:17:20.740295887 INFO 2024-04-09 23:16:41,062Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.376 0.0000377 -0.0000145 798 5.37 -0.26 -0.50 2020-09-02 15:22:43.172219038 INFO 2024-04-09 23:16:41,066Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.374 0.0000062 0.0000039 71 0.47 0.80 1.52 2020-09-02 15:23:11.859661102 INFO 2024-04-09 23:16:41,070Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.384 0.0002174 0.0000935 2968 19.98 0.46 0.87 2020-09-02 15:43:11.112406969 INFO 2024-04-09 23:16:41,074Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.380 -0.0000032 -0.0000109 499 3.65 -0.29 -0.55 2020-09-02 15:46:50.362361908 INFO 2024-04-09 23:16:41,078Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.331 0.0002396 0.0000736 3095 20.84 0.35 0.65 2020-09-02 16:07:40.883330107 INFO 2024-04-09 23:16:41,083Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.377 0.0000049 0.0000220 437 3.22 0.67 1.26 2020-09-02 16:10:54.707396030 INFO 2024-04-09 23:16:41,087Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.382 0.0002820 0.0000424 2965 19.96 0.21 0.39 2020-09-02 16:30:52.645245075 INFO 2024-04-09 23:16:41,092Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.418 0.0000239 0.0000480 381 2.85 1.64 3.12 2020-09-02 16:33:43.886892080 INFO 2024-04-09 23:16:41,097Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.381 0.0003279 0.0001662 2987 20.11 0.81 1.53 2020-09-02 16:53:50.753163099 INFO 2024-04-09 23:16:41,101Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.372 0.0000172 0.0000007 603 4.17 0.02 0.03 2020-09-02 16:58:01.497266054 INFO 2024-04-09 23:16:41,106Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.384 0.1317872 0.1193611 42244 284.48 48.55 77.75 2020-09-02 21:42:30.668184996 INFO 2024-04-09 23:16:41,116Z lrauvNc4ToNetcdf.py nudge_coords():871 41: - - - 8 0.05 - - INFO 2024-04-09 23:16:41,117Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 157303 INFO 2024-04-09 23:16:41,155Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200902T025854/20200902T224234/data.csv INFO 2024-04-09 23:16:41,260Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:41,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:41,841Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:42,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/202009020358_202009022142_2S_scieng.nc INFO 2024-04-09 23:16:42,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009020358_202009022142.nc4 INFO 2024-04-09 23:16:42,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/slate0000_198212041609_202009022142.nc4 file... INFO 2024-04-09 23:16:42,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_198212041609_202009022142.nc4 INFO 2024-04-09 23:16:43,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200831_20200902/20200902T035854/slate0000_198212041609_202009022142.nc4 ERROR 2024-04-09 23:16:43,224Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,224Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,225Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,225Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,225Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,225Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,225Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,226Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,227Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:16:43,227Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:16:43,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225519/202009022255_202009022256.nc4 file... INFO 2024-04-09 23:16:43,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009022255_202009022256.nc4 INFO 2024-04-09 23:16:43,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225519/202009022255_202009022256.nc4 INFO 2024-04-09 23:16:43,685Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:43,740Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:43,796Z lrauvNc4ToNetcdf.py createSeries():299 depth : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:43,851Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:43,906Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:43,974Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,034Z lrauvNc4ToNetcdf.py createSeries():299 depth : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,090Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,146Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,201Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,257Z lrauvNc4ToNetcdf.py createSeries():299 depth : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,312Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,368Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,424Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,479Z lrauvNc4ToNetcdf.py createSeries():299 depth : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,534Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:44,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:44,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:44,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:44,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:44,590Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 3 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:44,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:16:44,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping INFO 2024-04-09 23:16:44,599Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:44,600Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 20 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:16:44,604Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 20 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:16:44,607Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 3 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:44,610Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 3 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:16:44,612Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 3 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:44,615Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 3 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:16:44,618Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 52 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:44,623Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:44,633Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:44,643Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:44,653Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:44,663Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,673Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:44,674Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:44,684Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:44,689Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 41 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:44,695Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:44,698Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:16:44,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:16:44,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:16:44,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:44,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:16:44,714Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:44,718Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:44,723Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:44,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:44,756Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:45,221Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:45,240Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:45,702Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:45,722Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 51 v_t values found before 2020-09-02 22:55:00 and after 2020-09-02 22:56:00 INFO 2024-04-09 23:16:46,180Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:46,180Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225519/202009022255_202009022256.nc4 INFO 2024-04-09 23:16:46,273Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 153 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:46,365Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225519/202009022255_202009022256.nc4 INFO 2024-04-09 23:16:46,366Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:46,367Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 104 0.69 - - - INFO 2024-04-09 23:16:46,368Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 48 0.32 - - INFO 2024-04-09 23:16:46,368Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 152 INFO 2024-04-09 23:16:46,388Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200902T215519/20200902T235621/data.csv INFO 2024-04-09 23:16:46,484Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:46,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:46,793Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:47,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225519/202009022255_202009022256_2S_scieng.nc INFO 2024-04-09 23:16:47,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009022255_202009022256.nc4 INFO 2024-04-09 23:16:47,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225621/202009022256_202009030348.nc4 file... INFO 2024-04-09 23:16:47,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009022256_202009030348.nc4 INFO 2024-04-09 23:16:48,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225621/202009022256_202009030348.nc4 INFO 2024-04-09 23:16:48,129Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,217Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,301Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,389Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,472Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,555Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,636Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,714Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,791Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,870Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:48,951Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,034Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,121Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,208Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,288Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,378Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:49,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:49,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:49,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:49,462Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 53 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:49,470Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 14 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:49,479Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 11 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:49,486Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 22 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:49,500Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 25 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:49,540Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 31 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:49,559Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 31 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:49,577Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:49,585Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:49,593Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:49,601Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:49,614Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 82 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,648Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:49,654Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:49,691Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:49,728Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:49,765Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:49,803Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:49,839Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:49,873Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:49,897Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 64 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:49,921Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:49,929Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:49,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:49,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:49,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:49,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:49,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:49,975Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:50,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:50,029Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:50,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:50,078Z lrauvNc4ToNetcdf.py createSeries():299 depth : 81 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:50,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:50,156Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 80 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:50,894Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:50,933Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 80 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:51,685Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:51,719Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 80 v_t values found before 2020-09-02 22:56:00 and after 2020-09-03 03:48:00 INFO 2024-04-09 23:16:52,473Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:52,474Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225621/202009022256_202009030348.nc4 INFO 2024-04-09 23:16:52,671Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 43094 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:52,775Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 21 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225621/202009022256_202009030348.nc4 INFO 2024-04-09 23:16:52,776Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:52,777Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 222 1.49 - - - INFO 2024-04-09 23:16:52,779Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.279 0.0006165 0.0000609 3640 24.51 0.26 0.46 2020-09-02 23:22:21.609607935 INFO 2024-04-09 23:16:52,782Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.403 -0.0000179 0.0000133 42 0.28 5.04 8.97 2020-09-02 23:22:38.477474928 INFO 2024-04-09 23:16:52,784Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.364 0.0000148 -0.0000032 42 0.31 -1.06 -1.89 2020-09-02 23:22:57.521361113 INFO 2024-04-09 23:16:52,787Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.363 0.0000680 0.0000823 519 3.92 2.19 3.89 2020-09-02 23:26:52.954760075 INFO 2024-04-09 23:16:52,790Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.367 0.0003843 0.0003967 3718 25.03 1.64 2.94 2020-09-02 23:51:55.198523998 INFO 2024-04-09 23:16:52,793Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.372 -0.0000480 -0.0000187 255 1.91 -1.01 -1.81 2020-09-02 23:53:50.344827890 INFO 2024-04-09 23:16:52,795Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.328 0.0003089 -0.0005548 3709 24.97 -2.28 -4.12 2020-09-03 00:18:49.035279036 INFO 2024-04-09 23:16:52,799Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.376 0.0000042 -0.0000049 121 0.84 -0.60 -1.09 2020-09-03 00:19:39.636369944 INFO 2024-04-09 23:16:52,802Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.338 -0.0000041 0.0000012 7 0.04 2.98 5.38 2020-09-03 00:19:42.493969917 INFO 2024-04-09 23:16:52,805Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.385 0.0000403 0.0000043 386 2.91 0.15 0.27 2020-09-03 00:22:37.629267931 INFO 2024-04-09 23:16:52,808Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.343 -0.0019381 -0.0013869 9328 62.84 -2.22 -4.09 2020-09-03 01:25:28.557439089 INFO 2024-04-09 23:16:52,814Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.371 0.0000681 -0.0000151 640 4.82 -0.32 -0.58 2020-09-03 01:30:18.369832039 INFO 2024-04-09 23:16:52,818Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.356 0.0003684 0.0002988 8366 56.33 0.53 0.98 2020-09-03 02:26:38.524725914 INFO 2024-04-09 23:16:52,824Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.380 0.0000493 -0.0000166 833 5.63 -0.30 -0.55 2020-09-03 02:32:16.898310900 INFO 2024-04-09 23:16:52,827Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.370 0.0000472 -0.0000267 985 6.68 -0.40 -0.74 2020-09-03 02:38:58.210148096 INFO 2024-04-09 23:16:52,830Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.379 0.0000448 -0.0000122 829 5.63 -0.22 -0.40 2020-09-03 02:44:36.555138111 INFO 2024-04-09 23:16:52,833Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 0.0000297 -0.0000125 817 5.49 -0.23 -0.42 2020-09-03 02:50:06.625179052 INFO 2024-04-09 23:16:52,836Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.368 0.0000320 -0.0000171 1035 7.02 -0.24 -0.45 2020-09-03 02:57:08.141396999 INFO 2024-04-09 23:16:52,839Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.387 -0.0000071 0.0000141 148 1.08 1.31 2.42 2020-09-03 02:58:13.206964016 INFO 2024-04-09 23:16:52,842Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.391 0.0000074 -0.0000091 127 0.96 -0.95 -1.76 2020-09-03 02:59:11.352845907 INFO 2024-04-09 23:16:52,845Z lrauvNc4ToNetcdf.py nudge_coords():871 21: - - - 7324 49.34 - - INFO 2024-04-09 23:16:52,845Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 43093 INFO 2024-04-09 23:16:52,872Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200902T215621/20200903T044832/data.csv INFO 2024-04-09 23:16:52,970Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:52,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:53,550Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:53,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200902T225621/202009022256_202009030348_2S_scieng.nc INFO 2024-04-09 23:16:53,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009022256_202009030348.nc4 INFO 2024-04-09 23:16:54,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T034832/202009030348_202009030456.nc4 file... INFO 2024-04-09 23:16:54,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009030348_202009030456.nc4 INFO 2024-04-09 23:16:54,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T034832/202009030348_202009030456.nc4 INFO 2024-04-09 23:16:54,636Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:54,703Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:54,769Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:54,845Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:54,910Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:54,978Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,040Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,102Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,163Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,230Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,300Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,363Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,429Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,492Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,554Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,616Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:16:55,668Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:16:55,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:16:55,676Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:16:55,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:16:55,684Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:16:55,687Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:16:55,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:16:55,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:16:55,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:16:55,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:16:55,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:16:55,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:16:55,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:16:55,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:16:55,738Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:16:55,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:16:55,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:16:55,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:16:55,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:16:55,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:16:55,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:16:55,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:16:55,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:16:55,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:55,832Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:16:55,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:16:55,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:16:55,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:16:55,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:55,860Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:55,876Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:55,893Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:55,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:16:55,936Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 53 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:56,436Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:56,459Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 53 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:56,956Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:56,985Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 53 v_t values found before 2020-09-03 03:48:00 and after 2020-09-03 04:56:00 INFO 2024-04-09 23:16:57,486Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:16:57,487Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T034832/202009030348_202009030456.nc4 INFO 2024-04-09 23:16:57,627Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 9926 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:16:57,727Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T034832/202009030348_202009030456.nc4 INFO 2024-04-09 23:16:57,727Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:16:57,728Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:16:57,729Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.382 0.0000310 -0.0000240 940 6.91 -0.35 -0.64 2020-09-03 03:55:28.702339888 INFO 2024-04-09 23:16:57,732Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.395 0.0002364 0.0002501 7509 50.56 0.49 0.92 2020-09-03 04:46:02.601083994 INFO 2024-04-09 23:16:57,735Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.374 0.0000013 0.0000126 38 0.25 5.05 9.42 2020-09-03 04:46:17.958040953 INFO 2024-04-09 23:16:57,738Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.384 0.0000452 -0.0000208 1183 8.35 -0.25 -0.46 2020-09-03 04:54:39.592932940 INFO 2024-04-09 23:16:57,742Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 252 1.69 - - INFO 2024-04-09 23:16:57,742Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 9925 INFO 2024-04-09 23:16:57,770Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T024833/20200903T055621/data.csv INFO 2024-04-09 23:16:57,869Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:16:57,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:16:58,404Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:16:58,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T034832/202009030348_202009030456_2S_scieng.nc INFO 2024-04-09 23:16:58,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009030348_202009030456.nc4 INFO 2024-04-09 23:16:59,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T045621/202009030456_202009031501.nc4 file... INFO 2024-04-09 23:16:59,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009030456_202009031501.nc4 INFO 2024-04-09 23:17:00,049Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T045621/202009030456_202009031501.nc4 INFO 2024-04-09 23:17:00,096Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,237Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,386Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,538Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,658Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,767Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:00,879Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,011Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,143Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,283Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,392Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,509Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,622Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,728Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,830Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:01,939Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:02,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:02,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:02,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:02,051Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 49 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:02,063Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 9 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:02,080Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 16 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:02,089Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 21 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:02,116Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 25 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:02,192Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 30 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:02,223Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 30 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:02,253Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 6 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:02,269Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 6 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:02,283Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 6 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:02,296Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 6 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,308Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:02,321Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 78 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:02,391Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:02,456Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:02,520Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:02,583Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:02,645Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:02,708Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:02,764Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:02,804Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 62 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,843Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:02,846Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:02,859Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:02,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:02,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:02,891Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:02,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:02,914Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:02,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:03,005Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:03,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:03,101Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:03,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:03,221Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:03,984Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:04,029Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:04,887Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:04,933Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 77 v_t values found before 2020-09-03 04:56:00 and after 2020-09-03 15:01:00 INFO 2024-04-09 23:17:05,722Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:05,723Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T045621/202009030456_202009031501.nc4 INFO 2024-04-09 23:17:05,952Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 89366 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:06,051Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 20 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T045621/202009030456_202009031501.nc4 INFO 2024-04-09 23:17:06,051Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:06,053Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 562 3.78 - - - INFO 2024-04-09 23:17:06,055Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 0.0000422 -0.0000163 553 3.72 -0.44 -0.81 2020-09-03 05:03:52.333184004 INFO 2024-04-09 23:17:06,058Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.355 0.0000006 -0.0000013 125 0.84 -0.15 -0.29 2020-09-03 05:04:42.907284975 INFO 2024-04-09 23:17:06,061Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.371 0.0002864 0.0001070 16527 111.29 0.10 0.18 2020-09-03 06:56:00.413279057 INFO 2024-04-09 23:17:06,067Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.384 0.0000210 0.0000142 88 0.64 2.21 4.10 2020-09-03 06:56:39.468276978 INFO 2024-04-09 23:17:06,070Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.369 0.0000300 -0.0000142 632 4.85 -0.29 -0.54 2020-09-03 07:01:30.672383070 INFO 2024-04-09 23:17:06,073Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.365 0.0005692 -0.0002837 9655 65.04 -0.42 -0.81 2020-09-03 08:06:33.585505962 INFO 2024-04-09 23:17:06,079Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.379 0.0000042 0.0000195 86 0.60 3.11 5.97 2020-09-03 08:07:10.253181934 INFO 2024-04-09 23:17:06,083Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.394 0.0000008 0.0000094 9 0.05 16.90 32.40 2020-09-03 08:07:13.877980947 INFO 2024-04-09 23:17:06,086Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.421 0.0000065 -0.0000093 469 3.35 -0.27 -0.51 2020-09-03 08:10:35.425395012 INFO 2024-04-09 23:17:06,090Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.390 0.0005639 0.0000842 9851 66.33 0.12 0.24 2020-09-03 09:16:55.479878902 INFO 2024-04-09 23:17:06,096Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.389 0.0000755 -0.0001083 714 5.36 -1.96 -3.74 2020-09-03 09:22:17.769942045 INFO 2024-04-09 23:17:06,100Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.385 0.0003505 0.0002781 9586 64.54 0.42 0.80 2020-09-03 10:26:50.867273092 INFO 2024-04-09 23:17:06,105Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.394 0.0001196 -0.0000053 1068 7.85 -0.07 -0.13 2020-09-03 10:34:42.354218006 INFO 2024-04-09 23:17:06,109Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.374 0.0006550 0.0001963 9035 60.83 0.32 0.60 2020-09-03 11:35:32.766694069 INFO 2024-04-09 23:17:06,114Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.372 0.0000551 0.0000147 598 4.40 0.33 0.62 2020-09-03 11:39:57.477355003 INFO 2024-04-09 23:17:06,118Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.366 -0.0004567 0.0000340 9555 64.33 0.05 0.10 2020-09-03 12:44:17.994540930 INFO 2024-04-09 23:17:06,124Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.333 0.0000167 -0.0000332 537 3.97 -0.81 -1.55 2020-09-03 12:48:16.871646881 INFO 2024-04-09 23:17:06,128Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.395 0.0000229 0.0001673 9635 64.87 0.25 0.48 2020-09-03 13:53:09.629935980 INFO 2024-04-09 23:17:06,133Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.415 0.0000268 -0.0000247 528 4.02 -0.60 -1.14 2020-09-03 13:57:11.246314049 INFO 2024-04-09 23:17:06,138Z lrauvNc4ToNetcdf.py nudge_coords():871 20: - - - 9552 64.31 - - INFO 2024-04-09 23:17:06,138Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 89365 INFO 2024-04-09 23:17:06,165Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T035622/20200903T160131/data.csv INFO 2024-04-09 23:17:06,263Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:06,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:06,942Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:07,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T045621/202009030456_202009031501_2S_scieng.nc INFO 2024-04-09 23:17:07,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009030456_202009031501.nc4 INFO 2024-04-09 23:17:07,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T150131/202009031501_202009031635.nc4 file... INFO 2024-04-09 23:17:07,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009031501_202009031635.nc4 INFO 2024-04-09 23:17:08,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T150131/202009031501_202009031635.nc4 INFO 2024-04-09 23:17:08,327Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,395Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,468Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,538Z lrauvNc4ToNetcdf.py createSeries():299 time : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,610Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,682Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,756Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,820Z lrauvNc4ToNetcdf.py createSeries():299 time : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,893Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:08,968Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,031Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,095Z lrauvNc4ToNetcdf.py createSeries():299 time : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,157Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,219Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,284Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,348Z lrauvNc4ToNetcdf.py createSeries():299 time : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:09,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:09,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:09,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:09,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:09,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:09,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:09,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:09,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:09,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:09,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:09,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:09,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:09,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:09,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:09,475Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:09,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:09,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:09,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:09,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:09,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:09,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:09,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:09,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:09,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:09,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:09,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:09,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:09,584Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:09,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:09,594Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,610Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:09,613Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:09,632Z lrauvNc4ToNetcdf.py createSeries():299 depth : 87 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,647Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:09,678Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 86 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,737Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:09,766Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 86 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,818Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:09,844Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 86 v_t values found before 2020-09-03 15:01:00 and after 2020-09-03 16:35:00 INFO 2024-04-09 23:17:09,893Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:09,894Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T150131/202009031501_202009031635.nc4 INFO 2024-04-09 23:17:10,010Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 13649 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:10,119Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T150131/202009031501_202009031635.nc4 INFO 2024-04-09 23:17:10,120Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:10,121Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 40 0.26 - - - INFO 2024-04-09 23:17:10,122Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.387 0.0000115 -0.0000166 2097 14.99 -0.11 -0.21 2020-09-03 15:16:46.809839964 INFO 2024-04-09 23:17:10,125Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.390 -0.0000038 -0.0000071 178 1.28 -0.54 -1.03 2020-09-03 15:18:03.984013081 INFO 2024-04-09 23:17:10,127Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.388 0.0000002 0.0000121 185 1.38 0.85 1.62 2020-09-03 15:19:27.222151995 INFO 2024-04-09 23:17:10,129Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.372 0.0000419 0.0002223 3807 25.63 0.85 1.61 2020-09-03 15:45:05.389520884 INFO 2024-04-09 23:17:10,132Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.387 -0.0000026 -0.0000072 38 0.25 -2.84 -5.36 2020-09-03 15:45:20.728924990 INFO 2024-04-09 23:17:10,134Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.372 0.0000578 -0.0000034 1137 7.93 -0.04 -0.08 2020-09-03 15:53:17.033121109 INFO 2024-04-09 23:17:10,136Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.380 0.0000149 0.0000024 220 1.59 0.15 0.28 2020-09-03 15:54:52.753108025 INFO 2024-04-09 23:17:10,138Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.379 0.0000100 -0.0000112 906 6.35 -0.17 -0.33 2020-09-03 16:01:14.020808935 INFO 2024-04-09 23:17:10,141Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.366 0.0000151 0.0001886 3478 23.45 0.80 1.49 2020-09-03 16:24:41.466469049 INFO 2024-04-09 23:17:10,143Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.368 0.0000245 0.0000043 1461 10.20 0.04 0.08 2020-09-03 16:34:53.657322884 INFO 2024-04-09 23:17:10,146Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 101 0.70 - - INFO 2024-04-09 23:17:10,146Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 13648 INFO 2024-04-09 23:17:10,174Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T140131/20200903T173536/data.csv INFO 2024-04-09 23:17:10,272Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:10,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:10,950Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:11,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T150131/202009031501_202009031635_2S_scieng.nc INFO 2024-04-09 23:17:11,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009031501_202009031635.nc4 INFO 2024-04-09 23:17:11,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T163645/202009031636_202009031649.nc4 file... INFO 2024-04-09 23:17:11,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009031636_202009031649.nc4 INFO 2024-04-09 23:17:12,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T163645/202009031636_202009031649.nc4 INFO 2024-04-09 23:17:12,248Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,302Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,355Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,409Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,463Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,517Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,569Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,624Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,679Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,732Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,785Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,847Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,900Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:12,954Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,006Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,058Z lrauvNc4ToNetcdf.py createSeries():299 time : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,095Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:13,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:13,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:13,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:13,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:13,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:13,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:13,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:13,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:13,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:17:13,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:17:13,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:17:13,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:17:13,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:17:13,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:17:13,136Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:13,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:13,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:13,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:13,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:13,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:13,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:13,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:17:13,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:17:13,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:13,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:13,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:13,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:17:13,186Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:13,193Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:13,200Z lrauvNc4ToNetcdf.py createSeries():299 depth : 112 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:13,233Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 109 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,275Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:13,298Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 109 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,344Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:13,370Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 109 v_t values found before 2020-09-03 16:36:00 and after 2020-09-03 16:49:00 INFO 2024-04-09 23:17:13,420Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:13,421Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T163645/202009031636_202009031649.nc4 INFO 2024-04-09 23:17:13,540Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1607 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:13,625Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T163645/202009031636_202009031649.nc4 INFO 2024-04-09 23:17:13,625Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:13,626Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:17:13,627Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.355 0.0000150 -0.0000089 167 1.27 -0.70 -1.30 2020-09-03 16:39:56.332562923 INFO 2024-04-09 23:17:13,629Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.375 0.0000163 -0.0000137 890 6.10 -0.22 -0.42 2020-09-03 16:46:02.764085054 INFO 2024-04-09 23:17:13,631Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 549 3.69 - - INFO 2024-04-09 23:17:13,632Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1606 INFO 2024-04-09 23:17:13,651Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T153658/20200903T174944/data.csv INFO 2024-04-09 23:17:13,746Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:13,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:14,245Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:14,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T163645/202009031636_202009031649_2S_scieng.nc INFO 2024-04-09 23:17:14,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009031636_202009031649.nc4 INFO 2024-04-09 23:17:15,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T164946/202009031649_202009031905.nc4 file... INFO 2024-04-09 23:17:15,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009031649_202009031905.nc4 INFO 2024-04-09 23:17:18,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T164946/202009031649_202009031905.nc4 INFO 2024-04-09 23:17:18,461Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,526Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,593Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,661Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,732Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,799Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,863Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,926Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:18,991Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,052Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,114Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,177Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,238Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,300Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,366Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,431Z lrauvNc4ToNetcdf.py createSeries():299 time : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:19,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:19,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:19,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:19,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:19,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:19,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:19,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:19,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:19,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:19,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:19,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:19,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:19,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:19,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:19,601Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:19,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:19,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:19,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:19,687Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:19,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:19,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:19,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:19,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:19,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:19,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:19,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:19,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:19,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:19,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:17:19,781Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:19,809Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,832Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:19,836Z lrauvNc4ToNetcdf.py createSeries():299 depth : 33 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:19,889Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 31 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:19,940Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:19,968Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 31 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:20,020Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:20,052Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 31 v_t values found before 2020-09-03 16:49:00 and after 2020-09-03 19:05:00 INFO 2024-04-09 23:17:20,109Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:20,110Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T164946/202009031649_202009031905.nc4 INFO 2024-04-09 23:17:20,253Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 19802 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:20,354Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T164946/202009031649_202009031905.nc4 INFO 2024-04-09 23:17:20,354Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:20,355Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:17:20,356Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.389 0.0000059 -0.0000025 7 0.04 -6.32 -11.77 2020-09-03 16:51:41.086935997 INFO 2024-04-09 23:17:20,358Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.352 0.0000142 0.0000022 176 1.27 0.17 0.32 2020-09-03 16:52:57.440742970 INFO 2024-04-09 23:17:20,360Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.357 0.0000313 -0.0000026 850 5.86 -0.04 -0.08 2020-09-03 16:58:49.559803009 INFO 2024-04-09 23:17:20,362Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.351 0.0000117 0.0000048 122 0.82 0.58 1.09 2020-09-03 16:59:38.863100052 INFO 2024-04-09 23:17:20,365Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 18646 125.56 - - INFO 2024-04-09 23:17:20,365Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 19801 INFO 2024-04-09 23:17:20,394Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T154957/20200903T200513/data.csv INFO 2024-04-09 23:17:20,499Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:20,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:20,761Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:20,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T164946/202009031649_202009031905_2S_scieng.nc INFO 2024-04-09 23:17:20,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009031649_202009031905.nc4 INFO 2024-04-09 23:17:21,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T190513/202009031905_202009032159.nc4 file... INFO 2024-04-09 23:17:21,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009031905_202009032159.nc4 INFO 2024-04-09 23:17:21,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T190513/202009031905_202009032159.nc4 INFO 2024-04-09 23:17:21,735Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:21,836Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:21,945Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,073Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,162Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,255Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,355Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,460Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,550Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,636Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,726Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,835Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:22,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,022Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,125Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,207Z lrauvNc4ToNetcdf.py createSeries():299 time : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:23,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:23,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:23,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:23,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:23,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:23,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:23,310Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:23,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:23,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:23,349Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:23,356Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:23,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:23,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:23,376Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:23,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:23,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:23,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:23,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:23,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:23,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:23,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:23,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:23,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:23,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:23,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:23,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:23,540Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:23,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:23,553Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:23,596Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:23,635Z lrauvNc4ToNetcdf.py createSeries():299 depth : 70 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:23,707Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 69 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,776Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:23,812Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 69 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:23,893Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:23,935Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 69 v_t values found before 2020-09-03 19:05:00 and after 2020-09-03 21:59:00 INFO 2024-04-09 23:17:24,022Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:24,024Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T190513/202009031905_202009032159.nc4 INFO 2024-04-09 23:17:24,191Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 25569 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:24,316Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 23 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T190513/202009031905_202009032159.nc4 INFO 2024-04-09 23:17:24,317Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:24,318Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:17:24,319Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.394 0.0000157 -0.0000047 833 5.60 -0.08 -0.15 2020-09-03 19:10:50.586894035 INFO 2024-04-09 23:17:24,322Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0000181 -0.0000122 1057 7.25 -0.17 -0.31 2020-09-03 19:18:06.148272038 INFO 2024-04-09 23:17:24,325Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.389 0.0000901 -0.0000502 954 6.47 -0.77 -1.44 2020-09-03 19:24:34.920926094 INFO 2024-04-09 23:17:24,327Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.353 0.0000498 0.0000120 817 5.50 0.22 0.41 2020-09-03 19:30:05.094048023 INFO 2024-04-09 23:17:24,330Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.377 0.0000901 -0.0000518 825 5.55 -0.93 -1.73 2020-09-03 19:35:38.411252975 INFO 2024-04-09 23:17:24,333Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.388 0.0000397 -0.0000358 979 6.59 -0.54 -1.01 2020-09-03 19:42:13.971882105 INFO 2024-04-09 23:17:24,335Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.371 0.0002030 -0.0000017 1164 7.89 -0.02 -0.04 2020-09-03 19:50:07.676292896 INFO 2024-04-09 23:17:24,338Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.386 0.0001813 -0.0000393 1335 9.12 -0.43 -0.80 2020-09-03 19:59:15.444358110 INFO 2024-04-09 23:17:24,341Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.375 0.0001991 0.0000072 916 6.27 0.11 0.21 2020-09-03 20:05:32.256170988 INFO 2024-04-09 23:17:24,344Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.385 0.0001545 0.0000071 1123 7.64 0.09 0.17 2020-09-03 20:13:11.004092931 INFO 2024-04-09 23:17:24,347Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.370 0.0000757 -0.0000484 971 6.65 -0.73 -1.35 2020-09-03 20:19:50.117149115 INFO 2024-04-09 23:17:24,350Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.378 0.0000588 -0.0000179 559 3.76 -0.47 -0.88 2020-09-03 20:23:35.965197086 INFO 2024-04-09 23:17:24,353Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.368 0.0000294 -0.0000025 158 1.06 -0.23 -0.43 2020-09-03 20:24:39.842510939 INFO 2024-04-09 23:17:24,356Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.379 -0.0000712 0.0000258 3715 25.12 0.10 0.19 2020-09-03 20:49:47.392178059 INFO 2024-04-09 23:17:24,359Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.381 0.0001727 -0.0000773 888 6.58 -1.17 -2.18 2020-09-03 20:56:22.468580961 INFO 2024-04-09 23:17:24,362Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.385 0.0000432 0.0000391 4251 28.62 0.14 0.25 2020-09-03 21:24:59.977091074 INFO 2024-04-09 23:17:24,364Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.390 0.0001443 -0.0001358 611 4.59 -2.93 -5.48 2020-09-03 21:29:35.612056971 INFO 2024-04-09 23:17:24,367Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.351 0.0000212 0.0000004 41 0.27 0.15 0.27 2020-09-03 21:29:52.184854984 INFO 2024-04-09 23:17:24,370Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.363 0.0001092 -0.0001115 919 6.18 -1.79 -3.34 2020-09-03 21:36:03.635920048 INFO 2024-04-09 23:17:24,373Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 0.0000850 -0.0000478 838 5.69 -0.83 -1.56 2020-09-03 21:41:45.533133984 INFO 2024-04-09 23:17:24,376Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.367 0.0001267 -0.0000878 890 6.07 -1.43 -2.68 2020-09-03 21:47:50.204328060 INFO 2024-04-09 23:17:24,378Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.377 0.0000679 -0.0000543 902 6.10 -0.88 -1.65 2020-09-03 21:53:56.471168995 INFO 2024-04-09 23:17:24,381Z lrauvNc4ToNetcdf.py nudge_coords():871 23: - - - 820 5.52 - - INFO 2024-04-09 23:17:24,382Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 25568 INFO 2024-04-09 23:17:24,417Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T180513/20200903T225928/data.csv INFO 2024-04-09 23:17:24,512Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:24,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:24,838Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:25,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T190513/202009031905_202009032159_2S_scieng.nc INFO 2024-04-09 23:17:25,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009031905_202009032159.nc4 INFO 2024-04-09 23:17:25,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T215930/202009032159_202009032338.nc4 file... INFO 2024-04-09 23:17:25,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009032159_202009032338.nc4 INFO 2024-04-09 23:17:25,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T215930/202009032159_202009032338.nc4 INFO 2024-04-09 23:17:25,872Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:25,968Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,043Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,121Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,192Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,260Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,331Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,402Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,480Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,563Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,636Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,707Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,788Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,867Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:26,948Z lrauvNc4ToNetcdf.py createSeries():299 depth : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,030Z lrauvNc4ToNetcdf.py createSeries():299 time : 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:27,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:27,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:27,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:27,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:27,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:27,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:27,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:27,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:27,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:27,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:27,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:27,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:27,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:27,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:27,163Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 88 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:27,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:27,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:27,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:27,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:27,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:27,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:27,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:27,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:27,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:27,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:27,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:27,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:27,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:27,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:27,278Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:27,300Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:27,321Z lrauvNc4ToNetcdf.py createSeries():299 depth : 89 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:27,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:27,373Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 86 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:28,303Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:28,343Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 86 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:29,298Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:29,323Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 86 v_t values found before 2020-09-03 21:59:00 and after 2020-09-03 23:38:00 INFO 2024-04-09 23:17:30,232Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:30,233Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T215930/202009032159_202009032338.nc4 INFO 2024-04-09 23:17:30,358Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 14078 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:30,464Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 14 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T215930/202009032159_202009032338.nc4 INFO 2024-04-09 23:17:30,464Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:30,465Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:17:30,466Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.370 0.0000412 -0.0000133 176 1.27 -1.03 -1.94 2020-09-03 22:03:02.509264946 INFO 2024-04-09 23:17:30,468Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.394 0.0001394 -0.0000764 1015 7.04 -1.07 -2.01 2020-09-03 22:10:05.142774105 INFO 2024-04-09 23:17:30,471Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.385 0.0001624 -0.0001859 869 5.93 -3.09 -5.81 2020-09-03 22:16:01.340357065 INFO 2024-04-09 23:17:30,473Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.367 -0.0000117 0.0000043 313 2.19 0.20 0.37 2020-09-03 22:18:12.963434935 INFO 2024-04-09 23:17:30,475Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.359 0.0000287 0.0000119 156 1.16 1.01 1.90 2020-09-03 22:19:22.843462944 INFO 2024-04-09 23:17:30,477Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.349 0.0000867 0.0001922 2560 17.23 1.11 2.07 2020-09-03 22:36:37.152035952 INFO 2024-04-09 23:17:30,480Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.375 0.0001680 -0.0000727 811 5.52 -1.31 -2.44 2020-09-03 22:42:08.548742056 INFO 2024-04-09 23:17:30,482Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.386 0.0001068 -0.0000514 882 6.02 -0.85 -1.58 2020-09-03 22:48:09.928961039 INFO 2024-04-09 23:17:30,485Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.366 0.0001202 -0.0000328 568 3.99 -0.82 -1.52 2020-09-03 22:52:09.812464952 INFO 2024-04-09 23:17:30,488Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.348 0.0000574 -0.0000699 438 3.14 -2.20 -4.12 2020-09-03 22:55:18.727236032 INFO 2024-04-09 23:17:30,491Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.352 0.0000800 0.0001922 4631 31.18 0.61 1.14 2020-09-03 23:26:29.817217112 INFO 2024-04-09 23:17:30,493Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.356 0.0001063 -0.0000507 465 3.23 -1.56 -2.91 2020-09-03 23:29:43.799942017 INFO 2024-04-09 23:17:30,496Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.363 -0.0001698 0.0001312 231 1.78 7.34 13.67 2020-09-03 23:31:30.880384922 INFO 2024-04-09 23:17:30,499Z lrauvNc4ToNetcdf.py nudge_coords():871 14: - - - 962 7.12 - - INFO 2024-04-09 23:17:30,499Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 14077 INFO 2024-04-09 23:17:30,530Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T205940/20200904T003838/data.csv INFO 2024-04-09 23:17:30,626Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:30,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:30,930Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:31,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T215930/202009032159_202009032338_2S_scieng.nc INFO 2024-04-09 23:17:31,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009032159_202009032338.nc4 INFO 2024-04-09 23:17:31,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T233842/202009032338_202009040125.nc4 file... INFO 2024-04-09 23:17:31,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009032338_202009040125.nc4 INFO 2024-04-09 23:17:31,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T233842/202009032338_202009040125.nc4 INFO 2024-04-09 23:17:32,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:32,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:32,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:32,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:32,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:32,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:32,756Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:32,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:32,763Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:32,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:32,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:32,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:32,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:32,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:32,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:32,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:32,830Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:32,842Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:32,855Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:32,866Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:32,878Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:32,891Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:32,903Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:32,913Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 1 v_t values found before 2020-09-03 23:38:00 and after 2020-09-04 01:25:00 INFO 2024-04-09 23:17:32,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:32,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:32,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:32,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:32,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:32,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:32,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:32,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:33,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:33,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:33,106Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:33,177Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:33,259Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:33,260Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T233842/202009032338_202009040125.nc4 INFO 2024-04-09 23:17:33,399Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 14713 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:33,501Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T233842/202009032338_202009040125.nc4 INFO 2024-04-09 23:17:33,502Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:33,503Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:17:33,503Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.361 -0.0000022 -0.0000061 20 0.13 -4.75 -8.85 2020-09-03 23:40:40.158085108 INFO 2024-04-09 23:17:33,506Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 -0.0000414 -0.0000326 176 1.27 -2.56 -4.77 2020-09-03 23:41:56.468075991 INFO 2024-04-09 23:17:33,508Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.376 0.0005883 -0.0003296 3006 21.99 -1.49 -2.78 2020-09-04 00:03:56.440169096 INFO 2024-04-09 23:17:33,510Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.371 0.0002212 -0.0001901 1302 9.07 -2.08 -3.88 2020-09-04 00:13:01.104270935 INFO 2024-04-09 23:17:33,513Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.387 -0.0000211 -0.0000047 194 1.49 -0.31 -0.58 2020-09-04 00:14:30.884160995 INFO 2024-04-09 23:17:33,515Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.374 0.0000295 -0.0000432 383 2.94 -1.45 -2.72 2020-09-04 00:17:27.868176937 INFO 2024-04-09 23:17:33,517Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.369 -0.0001178 -0.0000035 5037 33.91 -0.01 -0.02 2020-09-04 00:51:23.007329941 INFO 2024-04-09 23:17:33,520Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.371 0.0000413 -0.0000069 76 0.54 -1.26 -2.34 2020-09-04 00:51:56.065411091 INFO 2024-04-09 23:17:33,523Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.385 0.0002058 -0.0001010 844 6.19 -1.62 -3.02 2020-09-04 00:58:07.832906961 INFO 2024-04-09 23:17:33,525Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.358 0.0002415 -0.0003595 2557 19.33 -1.84 -3.45 2020-09-04 01:17:28.325265884 INFO 2024-04-09 23:17:33,529Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 1117 7.51 - - INFO 2024-04-09 23:17:33,529Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 14712 INFO 2024-04-09 23:17:33,560Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200903T223853/20200904T022459/data.csv INFO 2024-04-09 23:17:33,658Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:33,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:33,994Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:34,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200903T233842/202009032338_202009040125_2S_scieng.nc INFO 2024-04-09 23:17:34,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009032338_202009040125.nc4 INFO 2024-04-09 23:17:34,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T012500/202009040125_202009040245.nc4 file... INFO 2024-04-09 23:17:34,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009040125_202009040245.nc4 INFO 2024-04-09 23:17:34,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T012500/202009040125_202009040245.nc4 INFO 2024-04-09 23:17:35,021Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,096Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,189Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,266Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,333Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,397Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,462Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,531Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,600Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,665Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,729Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,792Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,857Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,922Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:35,986Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,050Z lrauvNc4ToNetcdf.py createSeries():299 time : 60 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:36,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:36,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:36,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:36,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:36,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:36,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:36,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:36,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:36,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:36,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:36,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:36,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:36,183Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:36,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:36,190Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 60 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:36,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:36,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:36,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:36,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:36,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:36,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:36,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:36,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:36,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:36,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:36,310Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:36,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:36,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:36,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:36,330Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,347Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:36,350Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,365Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:36,368Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:36,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:36,420Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:37,009Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:37,036Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:37,668Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:37,698Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 61 v_t values found before 2020-09-04 01:25:00 and after 2020-09-04 02:45:00 INFO 2024-04-09 23:17:38,322Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:38,323Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T012500/202009040125_202009040245.nc4 INFO 2024-04-09 23:17:38,479Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11897 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:38,603Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T012500/202009040125_202009040245.nc4 INFO 2024-04-09 23:17:38,603Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:38,606Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 10725 72.21 - - - INFO 2024-04-09 23:17:38,608Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 1171 8.17 - - INFO 2024-04-09 23:17:38,608Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11896 INFO 2024-04-09 23:17:38,639Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T002500/20200904T034524/data.csv INFO 2024-04-09 23:17:38,740Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:38,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:39,197Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:39,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T012500/202009040125_202009040245_2S_scieng.nc INFO 2024-04-09 23:17:39,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009040125_202009040245.nc4 INFO 2024-04-09 23:17:40,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T024526/202009040245_202009040439.nc4 file... INFO 2024-04-09 23:17:40,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009040245_202009040439.nc4 INFO 2024-04-09 23:17:40,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T024526/202009040245_202009040439.nc4 INFO 2024-04-09 23:17:40,492Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:40,599Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:40,706Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:40,800Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:40,884Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:40,964Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,078Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,185Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,269Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,335Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,403Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,466Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,540Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,630Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,706Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,771Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:41,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:41,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:41,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:41,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:41,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:41,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:41,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:41,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:41,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:41,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:41,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:41,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:41,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:41,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:41,903Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 96 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:41,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:41,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:41,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:41,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:41,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:41,981Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:41,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:42,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:42,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:42,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:42,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:42,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:42,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:42,039Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:42,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:42,048Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:42,073Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:42,097Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:42,148Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,204Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:42,234Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,291Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:42,318Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 95 v_t values found before 2020-09-04 02:45:00 and after 2020-09-04 04:39:00 INFO 2024-04-09 23:17:42,370Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:42,371Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T024526/202009040245_202009040439.nc4 INFO 2024-04-09 23:17:42,493Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 16457 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:42,597Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 13 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T024526/202009040245_202009040439.nc4 INFO 2024-04-09 23:17:42,598Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:42,599Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:17:42,600Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 -0.0000227 0.0000085 8 0.05 17.97 33.44 2020-09-04 02:47:23.118504047 INFO 2024-04-09 23:17:42,602Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.366 0.0000342 -0.0000033 172 1.26 -0.26 -0.48 2020-09-04 02:48:39.410321951 INFO 2024-04-09 23:17:42,605Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.372 0.0001497 -0.0000631 864 5.93 -1.06 -1.97 2020-09-04 02:54:35.647336006 INFO 2024-04-09 23:17:42,607Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.372 0.0000776 -0.0001306 1031 7.02 -1.85 -3.45 2020-09-04 03:01:37.200370073 INFO 2024-04-09 23:17:42,609Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0002337 -0.0000821 961 6.52 -1.25 -2.33 2020-09-04 03:08:08.793026924 INFO 2024-04-09 23:17:42,612Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.384 0.0000276 -0.0000464 414 2.87 -1.60 -3.00 2020-09-04 03:11:01.433023930 INFO 2024-04-09 23:17:42,614Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.389 0.0000018 -0.0000927 303 2.23 -4.12 -7.70 2020-09-04 03:13:15.757370949 INFO 2024-04-09 23:17:42,617Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.377 0.0002812 -0.0003827 5084 34.23 -1.08 -2.07 2020-09-04 03:47:29.860645056 INFO 2024-04-09 23:17:42,621Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.350 0.0000948 -0.0001342 894 6.48 -2.01 -3.84 2020-09-04 03:53:58.860359907 INFO 2024-04-09 23:17:42,625Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.403 0.0000519 0.0005219 5256 35.39 1.44 2.73 2020-09-04 04:29:22.440289974 INFO 2024-04-09 23:17:42,629Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.375 0.0000051 0.0000009 38 0.25 0.34 0.64 2020-09-04 04:29:37.796200037 INFO 2024-04-09 23:17:42,632Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.370 0.0000270 -0.0000352 1325 9.28 -0.37 -0.70 2020-09-04 04:38:55.045296907 INFO 2024-04-09 23:17:42,635Z lrauvNc4ToNetcdf.py nudge_coords():871 13: - - - 106 0.71 - - INFO 2024-04-09 23:17:42,635Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 16456 INFO 2024-04-09 23:17:42,665Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T014536/20200904T053938/data.csv INFO 2024-04-09 23:17:42,766Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:42,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:43,191Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:43,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T024526/202009040245_202009040439_2S_scieng.nc INFO 2024-04-09 23:17:43,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009040245_202009040439.nc4 INFO 2024-04-09 23:17:44,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T043938/202009040439_202009041552.nc4 file... INFO 2024-04-09 23:17:44,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009040439_202009041552.nc4 INFO 2024-04-09 23:17:44,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T043938/202009040439_202009041552.nc4 INFO 2024-04-09 23:17:44,850Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:44,980Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,117Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,249Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,374Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,491Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,613Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,728Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,836Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:45,951Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,064Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,176Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,290Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,402Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,517Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,633Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:46,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:46,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:46,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:46,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:46,751Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:46,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:46,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:46,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:46,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:46,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:46,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:46,973Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:46,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:47,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:47,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:47,029Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:47,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:47,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:47,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:47,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:47,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:47,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:47,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:47,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:47,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:47,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:47,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:47,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:47,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:47,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:47,605Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:47,619Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:47,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:47,715Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:47,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:47,813Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:47,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:47,943Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:48,039Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:48,085Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:48,192Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:48,240Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 11 v_t values found before 2020-09-04 04:39:00 and after 2020-09-04 15:52:00 INFO 2024-04-09 23:17:48,342Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:48,343Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T043938/202009040439_202009041552.nc4 INFO 2024-04-09 23:17:48,562Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 98973 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:48,660Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 27 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T043938/202009040439_202009041552.nc4 INFO 2024-04-09 23:17:48,661Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:48,663Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 710 4.77 - - - INFO 2024-04-09 23:17:48,664Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.365 -0.0000187 -0.0000041 251 1.86 -0.21 -0.41 2020-09-04 04:46:17.073385954 INFO 2024-04-09 23:17:48,667Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.366 0.0000413 -0.0000370 170 1.28 -2.80 -5.35 2020-09-04 04:47:34.305567980 INFO 2024-04-09 23:17:48,670Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.340 -0.0000408 -0.0000384 7926 53.37 -0.07 -0.13 2020-09-04 05:40:56.619334936 INFO 2024-04-09 23:17:48,675Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.346 0.0000057 -0.0000490 704 5.19 -0.91 -1.75 2020-09-04 05:46:08.641186953 INFO 2024-04-09 23:17:48,678Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.367 -0.0001744 -0.0001692 6872 46.27 -0.36 -0.68 2020-09-04 06:32:25.128542899 INFO 2024-04-09 23:17:48,683Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.381 -0.0000106 0.0000006 584 4.41 0.01 0.03 2020-09-04 06:36:50.389178991 INFO 2024-04-09 23:17:48,686Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.380 0.0000047 -0.0001477 7484 50.39 -0.29 -0.54 2020-09-04 07:27:14.164805889 INFO 2024-04-09 23:17:48,690Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.373 0.0000983 0.0000328 465 3.54 0.90 1.72 2020-09-04 07:30:46.751234055 INFO 2024-04-09 23:17:48,694Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.378 -0.0004213 -0.0000412 7549 50.83 -0.08 -0.15 2020-09-04 08:21:36.761220932 INFO 2024-04-09 23:17:48,699Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.334 0.0000223 0.0000138 808 6.00 0.22 0.42 2020-09-04 08:27:37.157140017 INFO 2024-04-09 23:17:48,702Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.367 -0.0000658 0.0000397 7702 51.86 0.07 0.14 2020-09-04 09:19:28.932621002 INFO 2024-04-09 23:17:48,707Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.359 0.0001179 -0.0000613 626 4.70 -1.27 -2.42 2020-09-04 09:24:11.239713907 INFO 2024-04-09 23:17:48,710Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.375 0.0000621 0.0000679 6834 46.01 0.14 0.27 2020-09-04 10:10:12.336395979 INFO 2024-04-09 23:17:48,714Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.386 0.0001017 -0.0000777 1161 8.47 -0.89 -1.70 2020-09-04 10:18:41.053100109 INFO 2024-04-09 23:17:48,718Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.370 -0.0002239 0.0000150 7616 51.28 0.03 0.05 2020-09-04 11:09:58.115494967 INFO 2024-04-09 23:17:48,722Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.381 0.0000651 -0.0000260 437 3.34 -0.76 -1.44 2020-09-04 11:13:19.077491999 INFO 2024-04-09 23:17:48,725Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.364 0.0003888 0.0000536 7539 50.76 0.10 0.20 2020-09-04 12:04:05.037610054 INFO 2024-04-09 23:17:48,729Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.359 0.0000451 0.0000154 599 4.38 0.34 0.65 2020-09-04 12:08:28.021377087 INFO 2024-04-09 23:17:48,733Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.342 0.0003276 -0.0001373 7594 51.13 -0.26 -0.50 2020-09-04 12:59:36.233042002 INFO 2024-04-09 23:17:48,737Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 0.0000975 -0.0000384 556 4.18 -0.89 -1.70 2020-09-04 13:03:47.625474930 INFO 2024-04-09 23:17:48,741Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.369 0.0003633 -0.0002469 7672 51.65 -0.46 -0.89 2020-09-04 13:55:27.297375917 INFO 2024-04-09 23:17:48,745Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.373 0.0000480 -0.0000559 722 5.36 -1.01 -1.93 2020-09-04 14:00:49.320310116 INFO 2024-04-09 23:17:48,748Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 -0.0000361 -0.0001663 7021 47.27 -0.34 -0.65 2020-09-04 14:48:06.000268936 INFO 2024-04-09 23:17:48,753Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.376 0.0000960 -0.0000312 899 6.53 -0.46 -0.89 2020-09-04 14:54:38.292854071 INFO 2024-04-09 23:17:48,756Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.381 0.0000464 -0.0000123 7509 50.56 -0.02 -0.05 2020-09-04 15:45:12.225389004 INFO 2024-04-09 23:17:48,760Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.369 -0.0000216 -0.0000016 488 3.66 -0.04 -0.08 2020-09-04 15:48:52.197208881 INFO 2024-04-09 23:17:48,764Z lrauvNc4ToNetcdf.py nudge_coords():871 27: - - - 474 3.18 - - INFO 2024-04-09 23:17:48,764Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 98972 INFO 2024-04-09 23:17:48,792Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T033939/20200904T165204/data.csv INFO 2024-04-09 23:17:48,894Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:48,904Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:49,442Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:49,877Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T043938/202009040439_202009041552_2S_scieng.nc INFO 2024-04-09 23:17:49,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009040439_202009041552.nc4 INFO 2024-04-09 23:17:50,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T155204/202009041552_202009041657.nc4 file... INFO 2024-04-09 23:17:50,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009041552_202009041657.nc4 INFO 2024-04-09 23:17:50,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T155204/202009041552_202009041657.nc4 INFO 2024-04-09 23:17:50,559Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,625Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,688Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,753Z lrauvNc4ToNetcdf.py createSeries():299 time : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,815Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,877Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:50,947Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,023Z lrauvNc4ToNetcdf.py createSeries():299 time : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,087Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,154Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,216Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,280Z lrauvNc4ToNetcdf.py createSeries():299 time : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,348Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,413Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,474Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,536Z lrauvNc4ToNetcdf.py createSeries():299 time : 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:51,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:51,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:51,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:51,596Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 59 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:51,601Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 11 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:51,607Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 12 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:51,612Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 54 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:51,620Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 14 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:51,633Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 30 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:51,642Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 30 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,648Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:51,649Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 5 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,653Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:51,654Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 5 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:51,659Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 5 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:51,664Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 5 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,668Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:51,671Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 77 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:51,684Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:51,702Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:51,719Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:51,736Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:51,754Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:51,771Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:51,788Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:51,797Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 60 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:51,807Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:51,812Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:51,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:51,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:51,835Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:51,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:17:51,842Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:51,859Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:51,876Z lrauvNc4ToNetcdf.py createSeries():299 depth : 76 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:51,919Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 72 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:51,978Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:52,002Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 72 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:52,048Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:52,072Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 72 v_t values found before 2020-09-04 15:52:00 and after 2020-09-04 16:57:00 INFO 2024-04-09 23:17:52,121Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:52,122Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T155204/202009041552_202009041657.nc4 INFO 2024-04-09 23:17:52,228Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 9718 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:52,321Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T155204/202009041552_202009041657.nc4 INFO 2024-04-09 23:17:52,322Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:52,323Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 405 2.72 - - - INFO 2024-04-09 23:17:52,325Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 9312 62.70 - - INFO 2024-04-09 23:17:52,326Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 9717 INFO 2024-04-09 23:17:52,363Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T145204/20200904T175730/data.csv INFO 2024-04-09 23:17:52,475Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:52,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:52,950Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:53,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T155204/202009041552_202009041657_2S_scieng.nc INFO 2024-04-09 23:17:53,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009041552_202009041657.nc4 INFO 2024-04-09 23:17:53,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T165731/202009041657_202009041948.nc4 file... INFO 2024-04-09 23:17:53,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009041657_202009041948.nc4 INFO 2024-04-09 23:17:54,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T165731/202009041657_202009041948.nc4 INFO 2024-04-09 23:17:54,148Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,228Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,302Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,375Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,453Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,523Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,594Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,675Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,749Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,825Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,899Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:54,971Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,041Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,111Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,180Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,253Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:55,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:55,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:55,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:55,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:55,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:55,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:55,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:55,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:55,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:55,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:55,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:55,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:55,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:55,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:55,410Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 53 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:55,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:55,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:55,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:55,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:55,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:55,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:55,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:55,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:55,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:55,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:55,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:17:55,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:17:55,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:55,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:55,599Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:55,629Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:55,660Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:55,717Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 51 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,774Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:55,802Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 51 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,857Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:55,884Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 51 v_t values found before 2020-09-04 16:57:00 and after 2020-09-04 19:48:00 INFO 2024-04-09 23:17:55,941Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:17:55,942Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T165731/202009041657_202009041948.nc4 INFO 2024-04-09 23:17:56,075Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 24947 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:17:56,172Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 16 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T165731/202009041657_202009041948.nc4 INFO 2024-04-09 23:17:56,172Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:17:56,174Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:17:56,174Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.370 0.0000072 0.0000194 270 2.00 0.95 1.80 2020-09-04 16:59:31.933234930 INFO 2024-04-09 23:17:56,177Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.345 0.0001368 -0.0000838 2075 15.05 -0.54 -1.03 2020-09-04 17:14:35.466259003 INFO 2024-04-09 23:17:56,179Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.386 0.0000691 -0.0000195 394 2.91 -0.65 -1.24 2020-09-04 17:17:30.281008005 INFO 2024-04-09 23:17:56,182Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.372 -0.0001026 -0.0000153 2351 15.82 -0.09 -0.18 2020-09-04 17:33:20.095242023 INFO 2024-04-09 23:17:56,184Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.378 -0.0000396 0.0000317 254 1.82 1.69 3.23 2020-09-04 17:35:09.696147919 INFO 2024-04-09 23:17:56,187Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.374 0.0000553 -0.0000223 41 0.27 -8.05 -15.34 2020-09-04 17:35:26.265127897 INFO 2024-04-09 23:17:56,189Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.382 0.0000301 -0.0000186 829 5.63 -0.32 -0.61 2020-09-04 17:41:04.552095890 INFO 2024-04-09 23:17:56,191Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.347 0.0000400 0.0000089 855 5.75 0.15 0.29 2020-09-04 17:46:50.047554016 INFO 2024-04-09 23:17:56,194Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.365 -0.0000238 0.0000173 341 2.29 0.74 1.40 2020-09-04 17:49:07.796546936 INFO 2024-04-09 23:17:56,196Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.437 0.0000033 -0.0000063 157 1.05 -0.58 -1.10 2020-09-04 17:50:11.444493055 INFO 2024-04-09 23:17:56,198Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.378 -0.0000348 0.0001479 4978 33.51 0.43 0.82 2020-09-04 18:23:42.797374964 INFO 2024-04-09 23:17:56,201Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.407 0.0000651 -0.0000357 510 3.80 -0.92 -1.74 2020-09-04 18:27:30.962398052 INFO 2024-04-09 23:17:56,204Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.366 -0.0000120 -0.0002077 5090 34.27 -0.59 -1.12 2020-09-04 19:01:47.475459099 INFO 2024-04-09 23:17:56,207Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.389 0.0000362 -0.0000470 607 4.49 -1.02 -1.94 2020-09-04 19:06:17.059515953 INFO 2024-04-09 23:17:56,210Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.379 0.0000410 0.0002571 5098 34.32 0.73 1.39 2020-09-04 19:40:36.804239988 INFO 2024-04-09 23:17:56,214Z lrauvNc4ToNetcdf.py nudge_coords():871 16: - - - 1093 7.73 - - INFO 2024-04-09 23:17:56,214Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 24946 INFO 2024-04-09 23:17:56,241Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T155731/20200904T204821/data.csv INFO 2024-04-09 23:17:56,338Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:17:56,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:17:56,897Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:17:57,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T165731/202009041657_202009041948_2S_scieng.nc INFO 2024-04-09 23:17:57,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009041657_202009041948.nc4 INFO 2024-04-09 23:17:57,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T194821/202009041948_202009042023.nc4 file... INFO 2024-04-09 23:17:57,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009041948_202009042023.nc4 INFO 2024-04-09 23:17:58,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T194821/202009041948_202009042023.nc4 INFO 2024-04-09 23:17:58,041Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,103Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,160Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,218Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,277Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,340Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,424Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,499Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,585Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,673Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,729Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,791Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,849Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,905Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:58,967Z lrauvNc4ToNetcdf.py createSeries():299 depth : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,035Z lrauvNc4ToNetcdf.py createSeries():299 time : 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:17:59,087Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:17:59,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:17:59,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:17:59,094Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 66 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:17:59,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:17:59,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:17:59,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:17:59,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:17:59,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:17:59,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:17:59,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:17:59,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:17:59,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:17:59,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:17:59,146Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 78 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:17:59,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:17:59,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:17:59,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:17:59,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:17:59,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:17:59,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:17:59,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:17:59,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:17:59,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:59,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:17:59,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:17:59,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:17:59,227Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:17:59,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:59,234Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:59,244Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:59,254Z lrauvNc4ToNetcdf.py createSeries():299 depth : 77 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:17:59,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:17:59,294Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 76 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:18:00,011Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:00,048Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 76 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:18:00,842Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:00,865Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 76 v_t values found before 2020-09-04 19:48:00 and after 2020-09-04 20:23:00 INFO 2024-04-09 23:18:01,762Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:01,762Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T194821/202009041948_202009042023.nc4 INFO 2024-04-09 23:18:01,914Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 5182 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:02,074Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T194821/202009041948_202009042023.nc4 INFO 2024-04-09 23:18:02,074Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:02,076Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 178 1.19 - - - INFO 2024-04-09 23:18:02,076Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 -0.0001442 -0.0000256 4663 31.39 -0.08 -0.15 2020-09-04 20:20:57.400171041 INFO 2024-04-09 23:18:02,079Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 340 2.63 - - INFO 2024-04-09 23:18:02,079Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 5181 INFO 2024-04-09 23:18:02,113Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T184821/20200904T212336/data.csv INFO 2024-04-09 23:18:02,210Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:02,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:02,881Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:03,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T194821/202009041948_202009042023_2S_scieng.nc INFO 2024-04-09 23:18:03,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009041948_202009042023.nc4 INFO 2024-04-09 23:18:03,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T202336/202009042023_202009042207.nc4 file... INFO 2024-04-09 23:18:03,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009042023_202009042207.nc4 INFO 2024-04-09 23:18:04,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T202336/202009042023_202009042207.nc4 INFO 2024-04-09 23:18:04,451Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:04,593Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:04,710Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:04,810Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:04,942Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,038Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,132Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,220Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,304Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,386Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,460Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,556Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,658Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,739Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,821Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,904Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:05,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:05,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:05,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:05,965Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 106 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:05,971Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 21 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:05,976Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 24 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:05,981Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 109 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:05,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:05,989Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 19 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:06,002Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 55 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:06,009Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 55 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:06,016Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 11 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:06,022Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 11 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:06,029Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 11 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:06,036Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 11 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:06,044Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 137 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:06,060Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:06,083Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:06,105Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:06,127Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:06,148Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:06,170Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:06,192Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:06,202Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 108 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:06,213Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 10 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,217Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:06,218Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 10 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:06,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:06,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:06,241Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:06,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:06,250Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:06,270Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:06,291Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:06,308Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:06,341Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 133 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:07,539Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:07,563Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 133 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:08,824Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:08,849Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 133 v_t values found before 2020-09-04 20:23:00 and after 2020-09-04 22:07:00 INFO 2024-04-09 23:18:10,050Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:10,051Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T202336/202009042023_202009042207.nc4 INFO 2024-04-09 23:18:10,192Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 15403 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:10,285Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 12 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T202336/202009042023_202009042207.nc4 INFO 2024-04-09 23:18:10,285Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:10,286Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 941 6.39 - - - INFO 2024-04-09 23:18:10,287Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 0.0000548 -0.0000179 817 5.49 -0.32 -0.60 2020-09-04 20:35:29.907787085 INFO 2024-04-09 23:18:10,289Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.373 -0.0000860 -0.0000625 817 5.49 -1.11 -2.11 2020-09-04 20:40:59.965125084 INFO 2024-04-09 23:18:10,292Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.375 -0.0003448 -0.0003883 2349 15.94 -2.37 -4.52 2020-09-04 20:56:56.496267080 INFO 2024-04-09 23:18:10,294Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.370 0.0001300 0.0000794 261 1.87 4.12 7.86 2020-09-04 20:58:49.245302916 INFO 2024-04-09 23:18:10,296Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.371 -0.0010617 0.0005184 2519 16.95 2.98 5.67 2020-09-04 21:15:46.920378923 INFO 2024-04-09 23:18:10,298Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.360 -0.0000438 0.0000101 171 1.26 0.78 1.48 2020-09-04 21:17:02.736447096 INFO 2024-04-09 23:18:10,300Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.389 0.0000078 -0.0000137 41 0.27 -4.96 -9.44 2020-09-04 21:17:19.277009964 INFO 2024-04-09 23:18:10,302Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.364 0.0000423 -0.0000508 843 5.73 -0.86 -1.65 2020-09-04 21:23:03.219372988 INFO 2024-04-09 23:18:10,305Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.358 0.0002643 -0.0001093 1007 6.89 -1.54 -2.94 2020-09-04 21:29:56.777192116 INFO 2024-04-09 23:18:10,307Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.374 0.0000183 -0.0000038 312 2.10 -0.18 -0.34 2020-09-04 21:32:03.001200914 INFO 2024-04-09 23:18:10,309Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.407 0.0000497 -0.0000187 206 1.38 -1.31 -2.50 2020-09-04 21:33:26.452708960 INFO 2024-04-09 23:18:10,311Z lrauvNc4ToNetcdf.py nudge_coords():871 12: - - - 5118 34.46 - - INFO 2024-04-09 23:18:10,312Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 15402 INFO 2024-04-09 23:18:10,341Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T192336/20200904T230755/data.csv INFO 2024-04-09 23:18:10,438Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:10,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:11,175Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:12,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T202336/202009042023_202009042207_2S_scieng.nc INFO 2024-04-09 23:18:12,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009042023_202009042207.nc4 INFO 2024-04-09 23:18:12,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T220755/202009042207_202009042244.nc4 file... INFO 2024-04-09 23:18:12,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009042207_202009042244.nc4 INFO 2024-04-09 23:18:15,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T220755/202009042207_202009042244.nc4 INFO 2024-04-09 23:18:15,563Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:15,653Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:15,723Z lrauvNc4ToNetcdf.py createSeries():299 depth : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:15,786Z lrauvNc4ToNetcdf.py createSeries():299 time : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:15,855Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:15,948Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,016Z lrauvNc4ToNetcdf.py createSeries():299 depth : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,086Z lrauvNc4ToNetcdf.py createSeries():299 time : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,172Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,236Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,309Z lrauvNc4ToNetcdf.py createSeries():299 depth : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,424Z lrauvNc4ToNetcdf.py createSeries():299 time : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,510Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,578Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,645Z lrauvNc4ToNetcdf.py createSeries():299 depth : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,706Z lrauvNc4ToNetcdf.py createSeries():299 time : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:16,755Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:16,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:16,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:16,764Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 2 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:16,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:16,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:16,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:16,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:16,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:16,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:16,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:16,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:16,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:16,810Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:16,813Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:16,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:16,835Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:16,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:16,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:16,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:16,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:16,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:16,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:16,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:16,877Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:16,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:18:16,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:18:16,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:16,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:16,896Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:16,909Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:16,921Z lrauvNc4ToNetcdf.py createSeries():299 depth : 3 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:16,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:16,964Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 2 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:17,020Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:17,056Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 2 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:17,126Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:17,153Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 2 v_t values found before 2020-09-04 22:07:00 and after 2020-09-04 22:44:00 INFO 2024-04-09 23:18:17,204Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:17,205Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T220755/202009042207_202009042244.nc4 INFO 2024-04-09 23:18:17,331Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 5218 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:17,437Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T220755/202009042207_202009042244.nc4 INFO 2024-04-09 23:18:17,437Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:17,439Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:18:17,439Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.372 0.0000096 -0.0000184 38 0.25 -7.21 -13.68 2020-09-04 22:08:11.268362999 INFO 2024-04-09 23:18:17,442Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.354 0.0002839 -0.0001959 1909 13.47 -1.42 -2.70 2020-09-04 22:21:39.674993992 INFO 2024-04-09 23:18:17,444Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.384 0.0003080 -0.0001836 3060 20.80 -0.86 -1.64 2020-09-04 22:42:28.320933104 INFO 2024-04-09 23:18:17,447Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 207 1.53 - - INFO 2024-04-09 23:18:17,447Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 5217 INFO 2024-04-09 23:18:17,473Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T210755/20200904T234400/data.csv INFO 2024-04-09 23:18:17,613Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:17,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:17,871Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:18,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T220755/202009042207_202009042244_2S_scieng.nc INFO 2024-04-09 23:18:18,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009042207_202009042244.nc4 INFO 2024-04-09 23:18:18,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T224401/202009042244_202009050126.nc4 file... INFO 2024-04-09 23:18:18,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009042244_202009050126.nc4 INFO 2024-04-09 23:18:18,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T224401/202009042244_202009050126.nc4 INFO 2024-04-09 23:18:18,886Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:18,992Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,100Z lrauvNc4ToNetcdf.py createSeries():299 depth : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,205Z lrauvNc4ToNetcdf.py createSeries():299 time : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,344Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,450Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,559Z lrauvNc4ToNetcdf.py createSeries():299 depth : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,667Z lrauvNc4ToNetcdf.py createSeries():299 time : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,777Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:19,883Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,031Z lrauvNc4ToNetcdf.py createSeries():299 depth : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,168Z lrauvNc4ToNetcdf.py createSeries():299 time : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,306Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,425Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,544Z lrauvNc4ToNetcdf.py createSeries():299 depth : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,649Z lrauvNc4ToNetcdf.py createSeries():299 time : 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:20,756Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:20,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:20,764Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:20,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:20,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:20,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:20,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:20,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:20,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:20,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:20,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:20,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:20,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:20,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:20,829Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 48 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:20,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:20,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:20,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:20,877Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:20,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:20,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:20,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:20,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:20,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:20,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:20,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:20,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:20,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:20,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:20,942Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:20,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:20,979Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:21,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:21,018Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:21,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:21,100Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:22,097Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:22,143Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:23,082Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:23,130Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 47 v_t values found before 2020-09-04 22:44:00 and after 2020-09-05 01:26:00 INFO 2024-04-09 23:18:23,888Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:23,889Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T224401/202009042244_202009050126.nc4 INFO 2024-04-09 23:18:24,113Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 23773 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:24,254Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 23 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T224401/202009042244_202009050126.nc4 INFO 2024-04-09 23:18:24,254Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:24,255Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 1340 9.36 - - - INFO 2024-04-09 23:18:24,256Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.384 0.0001409 -0.0001163 819 5.51 -2.05 -3.91 2020-09-04 22:58:53.676923990 INFO 2024-04-09 23:18:24,259Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 0.0001892 -0.0001315 819 5.51 -2.31 -4.42 2020-09-04 23:04:24.581124067 INFO 2024-04-09 23:18:24,261Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.372 0.0000519 -0.0000914 819 5.51 -1.61 -3.07 2020-09-04 23:09:55.468287945 INFO 2024-04-09 23:18:24,263Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.371 -0.0000675 -0.0001949 823 5.54 -3.41 -6.52 2020-09-04 23:15:27.965333939 INFO 2024-04-09 23:18:24,266Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.386 -0.0000853 -0.0000704 818 5.50 -1.24 -2.37 2020-09-04 23:20:58.428000927 INFO 2024-04-09 23:18:24,268Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.370 0.0002573 -0.0000432 1099 7.45 -0.56 -1.07 2020-09-04 23:28:25.789417028 INFO 2024-04-09 23:18:24,271Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.390 -0.0001442 -0.0001172 1229 8.33 -1.36 -2.61 2020-09-04 23:36:45.744152069 INFO 2024-04-09 23:18:24,274Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.360 0.0001425 -0.0001286 863 5.86 -2.12 -4.06 2020-09-04 23:42:37.796564102 INFO 2024-04-09 23:18:24,276Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.378 0.0003868 -0.0000265 834 5.67 -0.45 -0.87 2020-09-04 23:48:18.185190916 INFO 2024-04-09 23:18:24,279Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.387 -0.0000191 0.0002634 849 5.77 4.41 8.47 2020-09-04 23:54:04.575170994 INFO 2024-04-09 23:18:24,282Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.374 -0.0003841 0.0002954 983 6.72 4.23 8.14 2020-09-05 00:00:48.437208891 INFO 2024-04-09 23:18:24,285Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.377 0.0006990 -0.0009100 1264 8.59 -10.20 -19.63 2020-09-05 00:09:24.303261042 INFO 2024-04-09 23:18:24,287Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.367 -0.0013811 0.0012863 2479 16.79 7.44 14.20 2020-09-05 00:26:11.852467060 INFO 2024-04-09 23:18:24,290Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.322 0.0000447 -0.0000049 215 1.62 -0.29 -0.56 2020-09-05 00:27:49.629410982 INFO 2024-04-09 23:18:24,293Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.367 0.0000993 -0.0000039 702 4.72 -0.08 -0.15 2020-09-05 00:32:33.201503038 INFO 2024-04-09 23:18:24,295Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.368 -0.0000036 -0.0001160 445 3.19 -3.54 -6.74 2020-09-05 00:35:45.003484011 INFO 2024-04-09 23:18:24,298Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.374 -0.0000069 -0.0000099 41 0.27 -3.58 -6.82 2020-09-05 00:36:01.561126947 INFO 2024-04-09 23:18:24,300Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.387 0.0001197 -0.0000737 972 6.65 -1.08 -2.05 2020-09-05 00:42:41.064019917 INFO 2024-04-09 23:18:24,303Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.374 0.0000993 -0.0001212 1078 7.37 -1.60 -3.05 2020-09-05 00:50:03.453397989 INFO 2024-04-09 23:18:24,305Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.360 -0.0001876 0.0000726 2733 18.68 0.38 0.72 2020-09-05 01:08:44.822005987 INFO 2024-04-09 23:18:24,308Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.369 0.0002630 -0.0000803 1151 8.03 -0.97 -1.85 2020-09-05 01:16:47.258228063 INFO 2024-04-09 23:18:24,311Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.378 0.0001286 -0.0001172 1333 9.08 -1.25 -2.39 2020-09-05 01:25:52.645015001 INFO 2024-04-09 23:18:24,314Z lrauvNc4ToNetcdf.py nudge_coords():871 23: - - - 64 0.48 - - INFO 2024-04-09 23:18:24,315Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 23772 INFO 2024-04-09 23:18:24,360Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200904T214401/20200905T022622/data.csv INFO 2024-04-09 23:18:24,460Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:24,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:24,775Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:24,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200904T224401/202009042244_202009050126_2S_scieng.nc INFO 2024-04-09 23:18:24,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009042244_202009050126.nc4 INFO 2024-04-09 23:18:25,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/202009050126_202009050350.nc4 file... INFO 2024-04-09 23:18:25,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009050126_202009050350.nc4 INFO 2024-04-09 23:18:25,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/202009050126_202009050350.nc4 INFO 2024-04-09 23:18:25,863Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,004Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,120Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,241Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,341Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,433Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,552Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,682Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,807Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:26,943Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,058Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,166Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,250Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,347Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,475Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,578Z lrauvNc4ToNetcdf.py createSeries():299 time : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:27,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:27,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:27,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:27,684Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 12 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:27,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:27,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:27,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:27,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:27,741Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 5 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:27,755Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 5 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:27,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:27,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:27,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:27,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:27,793Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:27,818Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,832Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:27,835Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,849Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:27,853Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,867Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:27,870Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:27,886Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,899Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:27,902Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:27,917Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:27,929Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 10 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:27,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:27,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:27,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:27,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:27,973Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:27,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:27,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:27,984Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:28,014Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:28,045Z lrauvNc4ToNetcdf.py createSeries():299 depth : 13 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,073Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:28,118Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 12 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,335Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:28,379Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 12 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,631Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:28,671Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 12 v_t values found before 2020-09-05 01:26:00 and after 2020-09-05 03:50:00 INFO 2024-04-09 23:18:28,887Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:28,888Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/202009050126_202009050350.nc4 INFO 2024-04-09 23:18:29,090Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 21225 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:29,260Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 8 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/202009050126_202009050350.nc4 INFO 2024-04-09 23:18:29,260Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:29,262Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2678 18.22 - - - INFO 2024-04-09 23:18:29,263Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 0.0001251 -0.0001120 999 6.95 -1.56 -2.98 2020-09-05 01:51:33.413392067 INFO 2024-04-09 23:18:29,265Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.348 0.0000077 -0.0000230 429 2.88 -0.78 -1.48 2020-09-05 01:54:26.758217096 INFO 2024-04-09 23:18:29,267Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.392 -0.0000105 -0.0000176 58 0.38 -4.46 -8.51 2020-09-05 01:54:50.174837112 INFO 2024-04-09 23:18:29,270Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.355 -0.0000382 0.0000548 3964 26.69 0.20 0.38 2020-09-05 02:21:31.746846914 INFO 2024-04-09 23:18:29,273Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.380 0.0001089 -0.0000906 272 2.03 -4.35 -8.28 2020-09-05 02:23:33.871740103 INFO 2024-04-09 23:18:29,275Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.386 0.0004612 0.0001821 3458 23.28 0.76 1.45 2020-09-05 02:46:51.092433929 INFO 2024-04-09 23:18:29,278Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.372 -0.0000012 -0.0000168 38 0.25 -6.57 -12.50 2020-09-05 02:47:06.455178976 INFO 2024-04-09 23:18:29,282Z lrauvNc4ToNetcdf.py nudge_coords():871 8: - - - 9328 62.96 - - INFO 2024-04-09 23:18:29,282Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 21224 INFO 2024-04-09 23:18:29,323Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200905T002623/20200905T045004/data.csv INFO 2024-04-09 23:18:29,424Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:29,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:29,835Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:30,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/202009050126_202009050350_2S_scieng.nc INFO 2024-04-09 23:18:30,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009050126_202009050350.nc4 INFO 2024-04-09 23:18:30,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/slate0000_198212050931_202009050350.nc4 file... INFO 2024-04-09 23:18:30,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_198212050931_202009050350.nc4 INFO 2024-04-09 23:18:30,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T012622/slate0000_198212050931_202009050350.nc4 ERROR 2024-04-09 23:18:30,824Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,825Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,825Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,825Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,825Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,825Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,826Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,826Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,826Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,826Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,826Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,827Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,827Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,827Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,827Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:18:30,828Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:18:32,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T035005/202009050350_202009051816.nc4 file... INFO 2024-04-09 23:18:32,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009050350_202009051816.nc4 INFO 2024-04-09 23:18:32,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T035005/202009050350_202009051816.nc4 INFO 2024-04-09 23:18:32,587Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:32,764Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:32,941Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,105Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,268Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,424Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,564Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,713Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,857Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:33,998Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,158Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,298Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,439Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,591Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,752Z lrauvNc4ToNetcdf.py createSeries():299 depth : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:34,907Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:35,043Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,049Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:35,050Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:35,057Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:35,065Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:35,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:35,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:35,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:35,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:35,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:35,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:35,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:35,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:35,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:35,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:35,244Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 24 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:35,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:35,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:35,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:35,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:35,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:35,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:35,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:35,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:35,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:35,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:35,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:35,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:35,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:35,505Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:35,526Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:35,641Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:35,761Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:35,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:35,911Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:36,359Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:36,414Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:36,762Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:36,817Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 23 v_t values found before 2020-09-05 03:50:00 and after 2020-09-05 18:16:00 INFO 2024-04-09 23:18:37,234Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:37,235Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T035005/202009050350_202009051816.nc4 INFO 2024-04-09 23:18:37,551Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 127772 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:37,724Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 47 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T035005/202009050350_202009051816.nc4 INFO 2024-04-09 23:18:37,724Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:37,726Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:18:37,728Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.352 0.0003230 -0.0000898 1901 13.96 -0.62 -1.19 2020-09-05 04:04:04.008852959 INFO 2024-04-09 23:18:37,731Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.403 0.0000299 0.0000216 35 0.26 7.96 15.21 2020-09-05 04:04:20.148518085 INFO 2024-04-09 23:18:37,734Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.398 0.0001129 -0.0000566 582 4.29 -1.28 -2.44 2020-09-05 04:08:38.096398115 INFO 2024-04-09 23:18:37,738Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.396 -0.0001177 0.0002005 3862 26.00 0.75 1.43 2020-09-05 04:34:38.455065012 INFO 2024-04-09 23:18:37,741Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.417 0.0000411 -0.0000295 422 3.13 -0.92 -1.75 2020-09-05 04:37:46.680130959 INFO 2024-04-09 23:18:37,745Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.382 0.0002253 -0.0001057 4271 28.75 -0.36 -0.68 2020-09-05 05:06:32.305170059 INFO 2024-04-09 23:18:37,751Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.355 -0.0000061 -0.0000050 754 5.47 -0.09 -0.17 2020-09-05 05:12:01.012758970 INFO 2024-04-09 23:18:37,754Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.368 -0.0001162 -0.0000031 3226 21.72 -0.01 -0.03 2020-09-05 05:33:44.395843983 INFO 2024-04-09 23:18:37,758Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.371 0.0000791 -0.0000023 495 3.62 -0.06 -0.12 2020-09-05 05:37:21.876430035 INFO 2024-04-09 23:18:37,761Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.394 0.0002022 -0.0001437 4037 27.18 -0.51 -0.98 2020-09-05 06:04:33.032942056 INFO 2024-04-09 23:18:37,765Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.376 0.0001465 -0.0000672 1285 8.96 -0.73 -1.39 2020-09-05 06:13:30.897209883 INFO 2024-04-09 23:18:37,768Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.379 -0.0000168 0.0000587 45 0.47 12.12 23.08 2020-09-05 06:13:59.532021046 INFO 2024-04-09 23:18:37,771Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.373 -0.0000292 -0.0000241 392 2.83 -0.83 -1.57 2020-09-05 06:16:49.859292030 INFO 2024-04-09 23:18:37,775Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.352 0.0002131 -0.0002707 1070 7.20 -3.66 -6.97 2020-09-05 06:24:02.165771008 INFO 2024-04-09 23:18:37,778Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.367 0.0000192 -0.0000115 80 0.62 -1.80 -3.44 2020-09-05 06:24:39.672379971 INFO 2024-04-09 23:18:37,782Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.375 0.0006931 -0.0000789 10709 72.10 -0.11 -0.20 2020-09-05 07:36:46.108187914 INFO 2024-04-09 23:18:37,788Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.378 0.0000206 -0.0000040 365 2.63 -0.15 -0.28 2020-09-05 07:39:24.189111948 INFO 2024-04-09 23:18:37,791Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.372 0.0001083 -0.0000998 9265 62.38 -0.16 -0.30 2020-09-05 08:41:47.286319017 INFO 2024-04-09 23:18:37,797Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.368 0.0000456 -0.0000056 583 4.24 -0.13 -0.25 2020-09-05 08:46:02.388267994 INFO 2024-04-09 23:18:37,801Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.398 0.0002226 -0.0000485 10737 72.29 -0.07 -0.12 2020-09-05 09:58:20.131059884 INFO 2024-04-09 23:18:37,806Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.380 -0.0000027 -0.0000087 193 1.44 -0.58 -1.11 2020-09-05 09:59:47.024358988 INFO 2024-04-09 23:18:37,810Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.374 -0.0001702 0.0000651 10679 71.90 0.09 0.17 2020-09-05 11:11:41.340377092 INFO 2024-04-09 23:18:37,815Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.379 -0.0000018 -0.0000062 257 1.90 -0.32 -0.61 2020-09-05 11:13:35.740107059 INFO 2024-04-09 23:18:37,819Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.341 0.0003580 0.0002972 10653 71.72 0.40 0.77 2020-09-05 12:25:19.619142056 INFO 2024-04-09 23:18:37,825Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.411 0.0000372 -0.0000202 192 1.40 -1.40 -2.67 2020-09-05 12:26:44.157198906 INFO 2024-04-09 23:18:37,829Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.367 -0.0004553 -0.0001476 10848 73.04 -0.20 -0.37 2020-09-05 13:39:46.764470100 INFO 2024-04-09 23:18:37,835Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.374 0.0000604 -0.0000044 272 2.06 -0.21 -0.40 2020-09-05 13:41:50.853235006 INFO 2024-04-09 23:18:37,839Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.360 0.0002921 -0.0003469 11125 74.90 -0.45 -0.86 2020-09-05 14:56:45.380481005 INFO 2024-04-09 23:18:37,846Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.388 0.0000213 -0.0000390 676 4.73 -0.80 -1.53 2020-09-05 15:01:29.410032034 INFO 2024-04-09 23:18:37,850Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.306 0.0000461 0.0000024 714 4.80 0.05 0.09 2020-09-05 15:06:17.973800898 INFO 2024-04-09 23:18:37,853Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.371 0.0000334 -0.0000246 864 5.81 -0.41 -0.79 2020-09-05 15:12:07.012263060 INFO 2024-04-09 23:18:37,857Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.412 0.0000530 -0.0000174 820 5.51 -0.31 -0.58 2020-09-05 15:17:38.290961981 INFO 2024-04-09 23:18:37,860Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.364 0.0000187 -0.0000049 818 5.50 -0.09 -0.16 2020-09-05 15:23:08.811923027 INFO 2024-04-09 23:18:37,863Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.362 0.0000654 -0.0000177 1276 8.61 -0.20 -0.38 2020-09-05 15:31:45.997829914 INFO 2024-04-09 23:18:37,867Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.372 0.0000378 -0.0000026 972 6.60 -0.04 -0.07 2020-09-05 15:38:22.115164995 INFO 2024-04-09 23:18:37,870Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.369 -0.0000055 -0.0000115 55 0.48 -2.35 -4.47 2020-09-05 15:38:51.233295918 INFO 2024-04-09 23:18:37,874Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.380 0.0000016 -0.0000044 301 2.22 -0.20 -0.37 2020-09-05 15:41:04.739151955 INFO 2024-04-09 23:18:37,877Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.363 0.0003719 0.0005781 4825 32.48 1.72 3.30 2020-09-05 16:13:34.059559107 INFO 2024-04-09 23:18:37,883Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.388 -0.0000712 0.0000440 138 1.04 4.08 7.80 2020-09-05 16:14:37.070141077 INFO 2024-04-09 23:18:37,887Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.379 -0.0003539 0.0001331 4687 31.55 0.40 0.78 2020-09-05 16:46:10.625193119 INFO 2024-04-09 23:18:37,893Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.379 -0.0000230 0.0000051 126 0.97 0.50 0.97 2020-09-05 16:47:08.988205910 INFO 2024-04-09 23:18:37,897Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.367 -0.0002312 -0.0002439 4852 32.66 -0.71 -1.38 2020-09-05 17:19:49.208478928 INFO 2024-04-09 23:18:37,902Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.390 -0.0000165 -0.0000035 174 1.33 -0.25 -0.49 2020-09-05 17:21:09.220760107 INFO 2024-04-09 23:18:37,906Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.375 0.0000418 -0.0002457 4763 32.06 -0.72 -1.42 2020-09-05 17:53:13.476367950 INFO 2024-04-09 23:18:37,911Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.380 0.0002982 0.0001976 453 3.25 5.72 11.26 2020-09-05 17:56:29.096175909 INFO 2024-04-09 23:18:37,914Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.400 -0.0000675 0.0000154 2909 19.58 0.07 0.15 2020-09-05 18:16:04.356286049 INFO 2024-04-09 23:18:37,918Z lrauvNc4ToNetcdf.py nudge_coords():871 47: - - - 11 0.07 - - INFO 2024-04-09 23:18:37,918Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 127771 INFO 2024-04-09 23:18:37,957Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200905T025005/20200905T191609/data.csv INFO 2024-04-09 23:18:38,056Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:38,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:38,650Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:39,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T035005/202009050350_202009051816_2S_scieng.nc INFO 2024-04-09 23:18:39,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009050350_202009051816.nc4 INFO 2024-04-09 23:18:39,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T181726/202009051817_202009060221.nc4 file... INFO 2024-04-09 23:18:39,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009051817_202009060221.nc4 INFO 2024-04-09 23:18:40,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T181726/202009051817_202009060221.nc4 INFO 2024-04-09 23:18:40,183Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:40,326Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:40,516Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:40,662Z lrauvNc4ToNetcdf.py createSeries():299 time : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:40,827Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:40,970Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,103Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,238Z lrauvNc4ToNetcdf.py createSeries():299 time : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,374Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,505Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,636Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,747Z lrauvNc4ToNetcdf.py createSeries():299 time : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,857Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:41,968Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,103Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,225Z lrauvNc4ToNetcdf.py createSeries():299 time : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:42,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:42,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:42,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:42,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:42,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:42,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:42,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:42,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:42,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:18:42,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:18:42,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:18:42,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:18:42,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:18:42,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:18:42,421Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:42,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:42,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:42,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:42,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:42,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:42,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:42,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:18:42,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:18:42,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:42,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:42,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:42,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:42,549Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:42,622Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:42,694Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,758Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:42,804Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:42,915Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:42,958Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:43,068Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:43,112Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 23 v_t values found before 2020-09-05 18:17:00 and after 2020-09-06 02:21:00 INFO 2024-04-09 23:18:43,200Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:43,201Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T181726/202009051817_202009060221.nc4 INFO 2024-04-09 23:18:43,447Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 71197 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:43,608Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 43 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T181726/202009051817_202009060221.nc4 INFO 2024-04-09 23:18:43,608Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:43,611Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:18:43,612Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.371 -0.0000033 -0.0000074 68 0.45 -1.53 -3.02 2020-09-05 18:19:25.506916045 INFO 2024-04-09 23:18:43,616Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.407 0.0000965 0.0000188 166 1.27 1.39 2.75 2020-09-05 18:20:41.871006012 INFO 2024-04-09 23:18:43,620Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.387 -0.0000275 -0.0000708 921 6.38 -1.04 -2.06 2020-09-05 18:27:05.064641953 INFO 2024-04-09 23:18:43,624Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.376 0.0000088 -0.0001049 623 4.19 -2.34 -4.63 2020-09-05 18:31:17.125396967 INFO 2024-04-09 23:18:43,627Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.377 0.0000758 -0.0000590 116 0.77 -7.13 -14.12 2020-09-05 18:32:03.984213114 INFO 2024-04-09 23:18:43,631Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.389 -0.0000579 -0.0000314 982 6.60 -0.45 -0.88 2020-09-05 18:38:40.698914051 INFO 2024-04-09 23:18:43,635Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.375 0.0000020 -0.0000244 136 1.00 -2.30 -4.53 2020-09-05 18:39:41.012222052 INFO 2024-04-09 23:18:43,639Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.396 -0.0003618 0.0000162 6216 41.85 0.04 0.07 2020-09-05 19:21:32.284277916 INFO 2024-04-09 23:18:43,645Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.371 -0.0000585 -0.0000477 350 2.50 -1.79 -3.53 2020-09-05 19:24:02.785350084 INFO 2024-04-09 23:18:43,650Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.395 0.0006933 0.0004468 6215 41.84 1.00 1.98 2020-09-05 20:05:53.656120062 INFO 2024-04-09 23:18:43,655Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.403 -0.0000501 0.0000248 99 0.75 3.10 6.11 2020-09-05 20:06:39.173324108 INFO 2024-04-09 23:18:43,660Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.365 0.0005327 -0.0004668 5136 34.58 -1.27 -2.50 2020-09-05 20:41:14.173459053 INFO 2024-04-09 23:18:43,665Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.356 -0.0002254 -0.0000787 288 2.10 -3.51 -6.94 2020-09-05 20:43:20.654093027 INFO 2024-04-09 23:18:43,670Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.370 -0.0002221 0.0001438 6202 41.75 0.32 0.64 2020-09-05 21:25:06.257424115 INFO 2024-04-09 23:18:43,676Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.379 -0.0000164 0.0000422 185 1.36 2.90 5.74 2020-09-05 21:26:28.516263008 INFO 2024-04-09 23:18:43,681Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 0.0000028 -0.0001838 6206 41.78 -0.41 -0.82 2020-09-05 22:08:15.799283981 INFO 2024-04-09 23:18:43,686Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.379 -0.0001289 0.0000816 126 0.94 8.11 16.02 2020-09-05 22:09:12.816112995 INFO 2024-04-09 23:18:43,691Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.386 -0.0000019 -0.0000608 4147 27.92 -0.20 -0.40 2020-09-05 22:37:08.221955061 INFO 2024-04-09 23:18:43,697Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.387 0.0001889 -0.0001064 858 5.83 -1.71 -3.38 2020-09-05 22:42:58.372414112 INFO 2024-04-09 23:18:43,701Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.372 0.0001006 0.0000029 836 5.62 0.05 0.10 2020-09-05 22:48:36.138362885 INFO 2024-04-09 23:18:43,705Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.350 0.0001063 -0.0002237 1010 6.86 -3.05 -6.04 2020-09-05 22:55:27.975429058 INFO 2024-04-09 23:18:43,709Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.356 0.0007521 0.0001552 835 5.67 2.55 5.07 2020-09-05 23:01:08.740814924 INFO 2024-04-09 23:18:43,713Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.287 -0.0004075 -0.0002108 818 5.50 -3.58 -7.10 2020-09-05 23:06:39.286796093 INFO 2024-04-09 23:18:43,717Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.393 0.0003975 -0.0003742 820 5.51 -6.33 -12.57 2020-09-05 23:12:10.464128971 INFO 2024-04-09 23:18:43,721Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.400 0.0004193 -0.0003552 827 5.56 -5.96 -11.83 2020-09-05 23:17:44.592015982 INFO 2024-04-09 23:18:43,725Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.370 0.0019288 -0.0011479 1285 8.70 -12.28 -24.44 2020-09-05 23:26:27.225332022 INFO 2024-04-09 23:18:43,729Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.385 -0.0005691 -0.0000307 900 6.17 -0.46 -0.92 2020-09-05 23:32:37.940951109 INFO 2024-04-09 23:18:43,733Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.386 0.0006402 -0.0007285 960 6.57 -10.30 -20.54 2020-09-05 23:39:12.720392942 INFO 2024-04-09 23:18:43,737Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.357 0.0005902 -0.0012539 882 5.99 -19.42 -38.78 2020-09-05 23:45:12.631577015 INFO 2024-04-09 23:18:43,740Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.363 0.0000522 -0.0000407 50 0.47 -8.12 -16.21 2020-09-05 23:45:40.907411098 INFO 2024-04-09 23:18:43,744Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.379 0.0001058 -0.0001250 171 1.30 -8.93 -17.83 2020-09-05 23:46:59.264142990 INFO 2024-04-09 23:18:43,748Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.362 0.0002356 -0.0002250 2735 18.41 -1.13 -2.26 2020-09-06 00:05:24.229739904 INFO 2024-04-09 23:18:43,753Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.375 0.0002258 0.0000241 468 3.35 0.66 1.33 2020-09-06 00:08:45.732213974 INFO 2024-04-09 23:18:43,758Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.386 0.0000676 0.0000228 4680 31.51 0.07 0.13 2020-09-06 00:40:16.480230093 INFO 2024-04-09 23:18:43,764Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.383 0.0000024 0.0000520 187 1.38 3.47 6.96 2020-09-06 00:41:39.913410902 INFO 2024-04-09 23:18:43,768Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.372 -0.0001205 -0.0000400 6157 41.56 -0.09 -0.18 2020-09-06 01:23:14.029361010 INFO 2024-04-09 23:18:43,774Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.406 -0.0001189 0.0000826 557 4.00 1.91 3.83 2020-09-06 01:27:14.172918081 INFO 2024-04-09 23:18:43,778Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.348 -0.0000259 -0.0000200 1237 8.32 -0.22 -0.44 2020-09-06 01:35:33.956902981 INFO 2024-04-09 23:18:43,782Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.385 0.0001274 -0.0000604 182 1.31 -4.26 -8.55 2020-09-06 01:36:52.918081045 INFO 2024-04-09 23:18:43,786Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.362 0.0005000 -0.0003278 5574 37.53 -0.81 -1.62 2020-09-06 02:14:24.900585890 INFO 2024-04-09 23:18:43,793Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.348 -0.0000578 -0.0000405 184 1.33 -2.81 -5.63 2020-09-06 02:15:45.209176064 INFO 2024-04-09 23:18:43,798Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.375 -0.0000109 0.0000006 305 2.05 0.03 0.06 2020-09-06 02:17:48.400209904 INFO 2024-04-09 23:18:43,802Z lrauvNc4ToNetcdf.py nudge_coords():871 43: - - - 496 3.33 - - INFO 2024-04-09 23:18:43,802Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 71196 INFO 2024-04-09 23:18:43,845Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200905T171739/20200906T032109/data.csv INFO 2024-04-09 23:18:43,948Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:43,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:44,393Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:44,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200905T181726/202009051817_202009060221_2S_scieng.nc INFO 2024-04-09 23:18:44,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009051817_202009060221.nc4 INFO 2024-04-09 23:18:45,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T022111/202009060221_202009061704.nc4 file... INFO 2024-04-09 23:18:45,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009060221_202009061704.nc4 INFO 2024-04-09 23:18:46,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T022111/202009060221_202009061704.nc4 INFO 2024-04-09 23:18:46,272Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:46,436Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:46,603Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:46,759Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:46,915Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,037Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,163Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,291Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,434Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,563Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,707Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,828Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:47,946Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,083Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,225Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,353Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:48,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:48,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:48,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:48,493Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 139 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:48,521Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 12 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:48,530Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 15 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:48,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:48,554Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 66 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:48,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:18:48,590Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:18:48,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:18:48,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:18:48,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:18:48,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:18:48,613Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:48,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:48,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:48,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:48,708Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:48,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:48,716Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:48,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:18:48,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:18:48,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:48,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:48,747Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,753Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:48,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:48,777Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:48,894Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:48,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:49,010Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:49,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:49,155Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 136 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:50,505Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:50,554Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 136 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:51,879Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:51,927Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 136 v_t values found before 2020-09-06 02:21:00 and after 2020-09-06 17:04:00 INFO 2024-04-09 23:18:53,236Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:53,237Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T022111/202009060221_202009061704.nc4 INFO 2024-04-09 23:18:53,515Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 130678 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:53,625Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 36 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T022111/202009060221_202009061704.nc4 INFO 2024-04-09 23:18:53,625Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:53,627Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:18:53,628Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.312 0.0001012 -0.0000552 90 0.60 -8.47 -17.01 2020-09-06 02:23:09.106686115 INFO 2024-04-09 23:18:53,631Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.359 0.0001415 -0.0000591 172 1.27 -4.31 -8.65 2020-09-06 02:24:25.457541943 INFO 2024-04-09 23:18:53,634Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.402 0.0000930 -0.0001131 908 6.25 -1.67 -3.35 2020-09-06 02:30:41.057034969 INFO 2024-04-09 23:18:53,637Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.369 0.0000677 -0.0000282 116 0.78 -3.35 -6.74 2020-09-06 02:31:28.029629946 INFO 2024-04-09 23:18:53,640Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.394 -0.0000083 -0.0000237 208 1.40 -1.57 -3.15 2020-09-06 02:32:52.141215086 INFO 2024-04-09 23:18:53,643Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.382 0.0000995 -0.0000849 1022 6.87 -1.14 -2.29 2020-09-06 02:39:45.052108049 INFO 2024-04-09 23:18:53,646Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.342 0.0000303 -0.0000244 166 1.20 -1.88 -3.77 2020-09-06 02:40:57.535394907 INFO 2024-04-09 23:18:53,650Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.368 0.0001829 -0.0001188 10709 72.10 -0.15 -0.31 2020-09-06 03:53:03.974447012 INFO 2024-04-09 23:18:53,656Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.385 0.0002207 -0.0001621 254 1.82 -8.20 -16.46 2020-09-06 03:54:53.868282080 INFO 2024-04-09 23:18:53,659Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.369 -0.0002849 0.0001647 10428 70.21 0.22 0.43 2020-09-06 05:05:06.810452938 INFO 2024-04-09 23:18:53,665Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.376 0.0000243 0.0000039 195 1.40 0.26 0.52 2020-09-06 05:06:31.264218092 INFO 2024-04-09 23:18:53,669Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.394 0.0001614 -0.0000197 10634 71.67 -0.03 -0.05 2020-09-06 06:18:11.709249973 INFO 2024-04-09 23:18:53,675Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.378 -0.0000222 -0.0000374 235 1.75 -1.97 -3.95 2020-09-06 06:19:57.329843044 INFO 2024-04-09 23:18:53,679Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.372 0.0002408 0.0001281 5479 36.89 0.33 0.64 2020-09-06 06:56:50.851278067 INFO 2024-04-09 23:18:53,684Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.379 0.0000719 0.0000128 127 0.94 1.28 2.53 2020-09-06 06:57:47.676206112 INFO 2024-04-09 23:18:53,688Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.359 -0.0001720 0.0000124 8450 56.89 0.02 0.04 2020-09-06 07:54:41.498754025 INFO 2024-04-09 23:18:53,693Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.390 0.0000173 0.0000108 162 1.17 0.86 1.70 2020-09-06 07:55:52.344018936 INFO 2024-04-09 23:18:53,697Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.381 0.0000473 0.0000590 8443 56.84 0.10 0.19 2020-09-06 08:52:43.325423956 INFO 2024-04-09 23:18:53,702Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.373 -0.0001493 0.0000443 230 1.69 2.45 4.85 2020-09-06 08:54:25.257824898 INFO 2024-04-09 23:18:53,705Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.371 0.0002051 -0.0000528 8428 56.74 -0.09 -0.17 2020-09-06 09:51:10.172394991 INFO 2024-04-09 23:18:53,711Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.361 -0.0000932 -0.0000746 304 2.19 -3.19 -6.30 2020-09-06 09:53:22.202472925 INFO 2024-04-09 23:18:53,714Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.391 0.0014038 -0.0019037 8483 57.11 -3.11 -6.18 2020-09-06 10:50:29.316114902 INFO 2024-04-09 23:18:53,720Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 -0.0006747 0.0016038 268 1.95 76.93 152.26 2020-09-06 10:52:26.833327055 INFO 2024-04-09 23:18:53,723Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.385 -0.0006099 0.0003669 8467 57.00 0.60 1.19 2020-09-06 11:49:27.490987062 INFO 2024-04-09 23:18:53,728Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.376 0.0000185 -0.0000392 150 1.12 -3.27 -6.48 2020-09-06 11:50:35.264301061 INFO 2024-04-09 23:18:53,732Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.356 -0.0001874 0.0000975 6985 47.03 0.19 0.38 2020-09-06 12:37:37.269584894 INFO 2024-04-09 23:18:53,736Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.375 0.0000328 -0.0000176 114 0.88 -1.87 -3.69 2020-09-06 12:38:30.584112883 INFO 2024-04-09 23:18:53,740Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.359 -0.0001200 0.0000559 8464 56.98 0.09 0.18 2020-09-06 13:35:30.065540075 INFO 2024-04-09 23:18:53,745Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.385 0.0000523 -0.0000323 80 0.63 -4.82 -9.52 2020-09-06 13:36:08.104033947 INFO 2024-04-09 23:18:53,749Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.367 -0.0002523 -0.0000421 8425 56.72 -0.07 -0.14 2020-09-06 14:32:51.829411983 INFO 2024-04-09 23:18:53,755Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.365 -0.0000069 -0.0000640 440 3.19 -1.88 -3.72 2020-09-06 14:36:03.742094040 INFO 2024-04-09 23:18:53,759Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.368 -0.0000949 0.0001842 8530 57.43 0.30 0.59 2020-09-06 15:33:29.864574909 INFO 2024-04-09 23:18:53,765Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.375 0.0000213 -0.0000004 129 0.95 -0.04 -0.07 2020-09-06 15:34:27.540390015 INFO 2024-04-09 23:18:53,769Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.346 0.0000708 -0.0002336 8478 57.19 -0.38 -0.76 2020-09-06 16:31:39.305816889 INFO 2024-04-09 23:18:53,775Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.371 -0.0000289 -0.0000289 531 3.83 -0.71 -1.40 2020-09-06 16:35:29.224328041 INFO 2024-04-09 23:18:53,779Z lrauvNc4ToNetcdf.py nudge_coords():871 36: - - - 4373 29.44 - - INFO 2024-04-09 23:18:53,779Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 130677 INFO 2024-04-09 23:18:53,805Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T012122/20200906T180456/data.csv INFO 2024-04-09 23:18:53,901Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:53,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:54,445Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:54,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T022111/202009060221_202009061704_2S_scieng.nc INFO 2024-04-09 23:18:54,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009060221_202009061704.nc4 INFO 2024-04-09 23:18:55,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T170456/202009061704_202009061802.nc4 file... INFO 2024-04-09 23:18:55,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009061704_202009061802.nc4 INFO 2024-04-09 23:18:55,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T170456/202009061704_202009061802.nc4 INFO 2024-04-09 23:18:55,609Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:55,682Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:55,755Z lrauvNc4ToNetcdf.py createSeries():299 depth : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:55,839Z lrauvNc4ToNetcdf.py createSeries():299 time : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:55,915Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:55,984Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,055Z lrauvNc4ToNetcdf.py createSeries():299 depth : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,134Z lrauvNc4ToNetcdf.py createSeries():299 time : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,206Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,287Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,372Z lrauvNc4ToNetcdf.py createSeries():299 depth : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,447Z lrauvNc4ToNetcdf.py createSeries():299 time : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,514Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,593Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,670Z lrauvNc4ToNetcdf.py createSeries():299 depth : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,736Z lrauvNc4ToNetcdf.py createSeries():299 time : 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:18:56,792Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:18:56,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:18:56,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:18:56,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:18:56,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:18:56,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:18:56,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:18:56,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:18:56,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:18:56,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:18:56,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:18:56,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:18:56,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:18:56,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:18:56,864Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 22 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:18:56,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:18:56,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:18:56,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:18:56,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:18:56,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:18:56,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:18:56,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:18:56,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:18:56,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:56,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:18:56,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:18:56,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:18:56,976Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:56,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:18:56,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:56,987Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:57,003Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:57,019Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,032Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:18:57,069Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 20 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,134Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:57,160Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 20 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,211Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:57,239Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 20 v_t values found before 2020-09-06 17:04:00 and after 2020-09-06 18:02:00 INFO 2024-04-09 23:18:57,297Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:18:57,298Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T170456/202009061704_202009061802.nc4 INFO 2024-04-09 23:18:57,472Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8435 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:18:57,577Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T170456/202009061704_202009061802.nc4 INFO 2024-04-09 23:18:57,578Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:18:57,579Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:18:57,580Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.387 -0.0000010 -0.0000027 38 0.25 -1.02 -2.04 2020-09-06 17:05:12.471920967 INFO 2024-04-09 23:18:57,582Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 -0.0000621 0.0000253 7713 52.13 0.04 0.09 2020-09-06 17:57:20.940411091 INFO 2024-04-09 23:18:57,585Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 681 4.79 - - INFO 2024-04-09 23:18:57,586Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8434 INFO 2024-04-09 23:18:57,620Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T160456/20200906T190208/data.csv INFO 2024-04-09 23:18:57,768Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:18:57,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:18:58,358Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:18:59,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T170456/202009061704_202009061802_2S_scieng.nc INFO 2024-04-09 23:18:59,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009061704_202009061802.nc4 INFO 2024-04-09 23:18:59,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T180209/202009061802_202009061902.nc4 file... INFO 2024-04-09 23:18:59,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009061802_202009061902.nc4 INFO 2024-04-09 23:18:59,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T180209/202009061802_202009061902.nc4 INFO 2024-04-09 23:18:59,883Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:18:59,952Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,038Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,157Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,269Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,365Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,474Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,563Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,639Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,707Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,780Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,882Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:00,990Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,088Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,201Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,314Z lrauvNc4ToNetcdf.py createSeries():299 time : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:01,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:01,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:01,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:01,390Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 50 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:01,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:01,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:01,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:01,420Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:01,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:01,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:01,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:01,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:01,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:01,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:01,453Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:01,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:01,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:01,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:01,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:01,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:01,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:01,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:01,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:01,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:01,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:01,551Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:01,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:01,561Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,564Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:01,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:01,570Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:01,590Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:01,607Z lrauvNc4ToNetcdf.py createSeries():299 depth : 140 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:01,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:01,660Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 136 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:02,986Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:03,020Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 136 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:04,382Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:04,419Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 136 v_t values found before 2020-09-06 18:02:00 and after 2020-09-06 19:02:00 INFO 2024-04-09 23:19:06,039Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:06,040Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T180209/202009061802_202009061902.nc4 INFO 2024-04-09 23:19:06,183Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8973 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:06,297Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T180209/202009061802_202009061902.nc4 INFO 2024-04-09 23:19:06,298Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:06,299Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 410 2.75 - - - INFO 2024-04-09 23:19:06,300Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.398 0.0000748 -0.0000527 1076 7.24 -0.67 -1.35 2020-09-06 18:12:09.305156946 INFO 2024-04-09 23:19:06,302Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.372 -0.0001599 0.0000909 6973 46.95 0.18 0.36 2020-09-06 18:59:06.888297081 INFO 2024-04-09 23:19:06,306Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 513 3.81 - - INFO 2024-04-09 23:19:06,306Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8972 INFO 2024-04-09 23:19:06,340Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T170209/20200906T200256/data.csv INFO 2024-04-09 23:19:06,444Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:06,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:07,041Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:07,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T180209/202009061802_202009061902_2S_scieng.nc INFO 2024-04-09 23:19:07,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009061802_202009061902.nc4 INFO 2024-04-09 23:19:07,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/202009061902_202009062001.nc4 file... INFO 2024-04-09 23:19:07,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009061902_202009062001.nc4 INFO 2024-04-09 23:19:08,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/202009061902_202009062001.nc4 INFO 2024-04-09 23:19:08,427Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,493Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,563Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,628Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,691Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,756Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,818Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,883Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:08,949Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,018Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,080Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,141Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,205Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,264Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,325Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,385Z lrauvNc4ToNetcdf.py createSeries():299 time : 24 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:09,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:09,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:09,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:09,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:09,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:09,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:09,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:09,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:09,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:09,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:09,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:09,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:09,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:09,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:09,510Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 24 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:09,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:09,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:09,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:09,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:09,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:09,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:09,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:09,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:09,585Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:09,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:09,599Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:09,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:09,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:09,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:09,617Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:09,630Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:09,642Z lrauvNc4ToNetcdf.py createSeries():299 depth : 23 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,653Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:09,694Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 22 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,765Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:09,796Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 22 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,847Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:09,881Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 22 v_t values found before 2020-09-06 19:02:00 and after 2020-09-06 20:01:00 INFO 2024-04-09 23:19:09,938Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:09,939Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/202009061902_202009062001.nc4 INFO 2024-04-09 23:19:10,068Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8595 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:10,165Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/202009061902_202009062001.nc4 INFO 2024-04-09 23:19:10,166Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:10,168Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 628 4.22 - - - INFO 2024-04-09 23:19:10,168Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 -0.0000634 -0.0001404 7280 49.02 -0.26 -0.53 2020-09-06 19:56:15.756194115 INFO 2024-04-09 23:19:10,172Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 686 4.88 - - INFO 2024-04-09 23:19:10,172Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8594 INFO 2024-04-09 23:19:10,194Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T180256/20200906T210109/data.csv INFO 2024-04-09 23:19:10,292Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:10,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:10,916Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:11,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/202009061902_202009062001_2S_scieng.nc INFO 2024-04-09 23:19:11,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009061902_202009062001.nc4 INFO 2024-04-09 23:19:11,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/slate0000_202009061902_202009062001.nc4 file... INFO 2024-04-09 23:19:11,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_202009061902_202009062001.nc4 INFO 2024-04-09 23:19:12,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T190256/slate0000_202009061902_202009062001.nc4 ERROR 2024-04-09 23:19:12,327Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,327Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,328Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,328Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,328Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,328Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,329Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,329Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,329Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,329Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,330Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,330Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,330Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,330Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,331Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:19:12,331Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:19:12,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T200109/202009062001_202009062216.nc4 file... INFO 2024-04-09 23:19:12,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009062001_202009062216.nc4 INFO 2024-04-09 23:19:16,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T200109/202009062001_202009062216.nc4 INFO 2024-04-09 23:19:16,122Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,194Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,261Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,330Z lrauvNc4ToNetcdf.py createSeries():299 time : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,400Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,463Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,525Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,589Z lrauvNc4ToNetcdf.py createSeries():299 time : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,651Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,712Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,775Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,848Z lrauvNc4ToNetcdf.py createSeries():299 time : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,914Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:16,980Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,044Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,115Z lrauvNc4ToNetcdf.py createSeries():299 time : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:17,171Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:17,177Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:17,182Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:17,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:17,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:17,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:17,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:17,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:17,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:17,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:17,219Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:17,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:17,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:17,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:17,227Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:17,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:17,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:19:17,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:19:17,255Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:19:17,256Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:19:17,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:19:17,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:17,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:17,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:17,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:17,280Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:17,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:17,291Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,317Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:17,321Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:17,350Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:17,403Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 133 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,457Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:17,485Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 133 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,537Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:17,561Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 133 v_t values found before 2020-09-06 20:01:00 and after 2020-09-06 22:16:00 INFO 2024-04-09 23:19:17,613Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:17,614Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T200109/202009062001_202009062216.nc4 INFO 2024-04-09 23:19:17,726Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 20121 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:17,815Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 18 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T200109/202009062001_202009062216.nc4 INFO 2024-04-09 23:19:17,816Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:17,817Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 564 3.79 - - - INFO 2024-04-09 23:19:17,818Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.385 0.0004449 -0.0002061 1028 6.92 -2.74 -5.52 2020-09-06 20:11:52.436209917 INFO 2024-04-09 23:19:17,821Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.395 0.0000232 -0.0000313 860 5.78 -0.50 -1.00 2020-09-06 20:17:39.888036013 INFO 2024-04-09 23:19:17,823Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.370 0.0000945 -0.0000256 845 5.68 -0.41 -0.83 2020-09-06 20:23:21.281233072 INFO 2024-04-09 23:19:17,825Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.379 0.0002245 -0.0000551 821 5.52 -0.92 -1.85 2020-09-06 20:28:52.964237928 INFO 2024-04-09 23:19:17,828Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.351 0.0000977 -0.0001058 669 4.50 -2.16 -4.36 2020-09-06 20:33:23.282179117 INFO 2024-04-09 23:19:17,830Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.364 0.0000153 -0.0000323 121 0.81 -3.68 -7.41 2020-09-06 20:34:12.152465105 INFO 2024-04-09 23:19:17,832Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.410 -0.0000856 -0.0000030 1555 10.46 -0.03 -0.05 2020-09-06 20:44:40.364300013 INFO 2024-04-09 23:19:17,835Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.355 0.0000094 -0.0000382 249 1.79 -1.97 -3.95 2020-09-06 20:46:28.188802958 INFO 2024-04-09 23:19:17,838Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.396 0.0012899 0.0004627 2977 20.04 2.13 4.28 2020-09-06 21:06:30.970577002 INFO 2024-04-09 23:19:17,841Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.371 0.0000050 -0.0000108 58 0.38 -2.59 -5.19 2020-09-06 21:06:54.420011044 INFO 2024-04-09 23:19:17,844Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.384 0.0011778 -0.0005670 2981 20.07 -2.61 -5.24 2020-09-06 21:26:58.772216082 INFO 2024-04-09 23:19:17,847Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.352 0.0000168 -0.0000138 76 0.51 -2.52 -5.05 2020-09-06 21:27:29.593844891 INFO 2024-04-09 23:19:17,850Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.342 0.0002859 -0.0000927 2978 20.05 -0.43 -0.86 2020-09-06 21:47:32.784200907 INFO 2024-04-09 23:19:17,853Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.353 0.0000450 -0.0000188 147 0.98 -1.77 -3.55 2020-09-06 21:48:32.177066088 INFO 2024-04-09 23:19:17,855Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.383 0.0000542 0.0000699 3121 21.01 0.31 0.62 2020-09-06 22:09:33.140486956 INFO 2024-04-09 23:19:17,858Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.384 -0.0000272 0.0000217 38 0.25 8.08 16.21 2020-09-06 22:09:48.480122089 INFO 2024-04-09 23:19:17,861Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.371 0.0003033 -0.0002556 906 6.24 -3.78 -7.59 2020-09-06 22:16:03.560302973 INFO 2024-04-09 23:19:17,863Z lrauvNc4ToNetcdf.py nudge_coords():871 18: - - - 126 0.90 - - INFO 2024-04-09 23:19:17,863Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 20120 INFO 2024-04-09 23:19:17,891Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T190109/20200906T231658/data.csv INFO 2024-04-09 23:19:18,003Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:19:18,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:19:18,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:19:18,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:18,213Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:18,317Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T200109/202009062001_202009062216_2S_scieng.nc INFO 2024-04-09 23:19:18,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009062001_202009062216.nc4 INFO 2024-04-09 23:19:18,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T221826/202009062218_202009062227.nc4 file... INFO 2024-04-09 23:19:18,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009062218_202009062227.nc4 INFO 2024-04-09 23:19:19,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T221826/202009062218_202009062227.nc4 INFO 2024-04-09 23:19:19,196Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,261Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,325Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,390Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,454Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,522Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,587Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,651Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,715Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,778Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,842Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,906Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:19,974Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,042Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,109Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,184Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:20,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:20,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:20,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:20,255Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:20,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:20,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:20,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:20,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:20,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:20,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:20,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:20,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:20,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:20,278Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:20,280Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:20,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:20,291Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:20,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:20,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:20,301Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:20,304Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:20,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:20,307Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:20,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:20,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:20,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:20,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:19:20,334Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:20,340Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:20,345Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:20,385Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 50 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:20,939Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:20,974Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 50 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:21,556Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:21,579Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 50 v_t values found before 2020-09-06 22:18:00 and after 2020-09-06 22:27:00 INFO 2024-04-09 23:19:22,122Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:22,123Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T221826/202009062218_202009062227.nc4 INFO 2024-04-09 23:19:22,230Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1047 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:22,337Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T221826/202009062218_202009062227.nc4 INFO 2024-04-09 23:19:22,338Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:22,339Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:19:22,339Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.367 -0.0000385 0.0000530 54 0.36 13.69 27.48 2020-09-06 22:20:24.841394901 INFO 2024-04-09 23:19:22,341Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.393 0.0001053 -0.0000279 171 1.26 -2.04 -4.10 2020-09-06 22:21:41.038572073 INFO 2024-04-09 23:19:22,344Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 821 5.64 - - INFO 2024-04-09 23:19:22,344Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1046 INFO 2024-04-09 23:19:22,369Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T211838/20200906T232720/data.csv INFO 2024-04-09 23:19:22,465Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:22,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:22,680Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:22,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T221826/202009062218_202009062227_2S_scieng.nc INFO 2024-04-09 23:19:22,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009062218_202009062227.nc4 INFO 2024-04-09 23:19:23,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T222722/202009062227_202009070158.nc4 file... INFO 2024-04-09 23:19:23,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009062227_202009070158.nc4 INFO 2024-04-09 23:19:23,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T222722/202009062227_202009070158.nc4 INFO 2024-04-09 23:19:23,779Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:23,862Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:23,949Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,048Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,145Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,230Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,321Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,402Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,481Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,561Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,640Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,718Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,796Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,875Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:24,957Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,040Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:25,110Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:25,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:25,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:25,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:25,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:25,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:25,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:25,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:25,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:25,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:25,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:25,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:25,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:25,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:25,243Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:25,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:25,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:25,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:25,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:25,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:25,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:25,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:25,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:25,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:25,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:25,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:25,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:25,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:25,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:25,451Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:25,496Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:25,539Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:25,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:25,616Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 38 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:26,062Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:26,099Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 38 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:26,555Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:26,594Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 38 v_t values found before 2020-09-06 22:27:00 and after 2020-09-07 01:58:00 INFO 2024-04-09 23:19:27,048Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:27,049Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T222722/202009062227_202009070158.nc4 INFO 2024-04-09 23:19:27,224Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 30806 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:27,337Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 17 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T222722/202009062227_202009070158.nc4 INFO 2024-04-09 23:19:27,337Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:27,338Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:19:27,339Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.376 0.0000525 0.0000050 69 0.46 1.00 2.01 2020-09-06 22:29:18.893686056 INFO 2024-04-09 23:19:27,342Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.361 -0.0000677 0.0000709 166 1.29 5.08 10.18 2020-09-06 22:30:36.649936914 INFO 2024-04-09 23:19:27,344Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.368 0.0000562 0.0001428 922 6.38 2.07 4.15 2020-09-06 22:37:00.052220106 INFO 2024-04-09 23:19:27,347Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.360 0.0000210 -0.0000291 115 0.77 -3.49 -7.00 2020-09-06 22:37:46.604402065 INFO 2024-04-09 23:19:27,349Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.375 0.0002954 0.0000943 3354 22.58 0.39 0.77 2020-09-06 23:00:21.604126930 INFO 2024-04-09 23:19:27,352Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.373 0.0000010 0.0000523 103 0.72 6.81 13.50 2020-09-06 23:01:05.070476055 INFO 2024-04-09 23:19:27,354Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.365 0.0000596 -0.0000651 103 0.71 -8.51 -16.88 2020-09-06 23:01:48.392255068 INFO 2024-04-09 23:19:27,356Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.378 -0.0002913 0.0002976 1124 7.80 3.57 7.07 2020-09-06 23:09:36.528073072 INFO 2024-04-09 23:19:27,359Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.380 -0.0001966 0.0000490 320 2.15 2.14 4.23 2020-09-06 23:11:45.831780910 INFO 2024-04-09 23:19:27,362Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.431 -0.0003753 0.0001089 123 0.82 12.40 24.55 2020-09-06 23:12:35.542463064 INFO 2024-04-09 23:19:27,365Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.427 -0.0000456 0.0000221 3155 21.23 0.10 0.19 2020-09-06 23:33:50.146739960 INFO 2024-04-09 23:19:27,368Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.382 0.0000276 -0.0000478 112 0.78 -5.80 -11.37 2020-09-06 23:34:37.320054054 INFO 2024-04-09 23:19:27,371Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.367 0.0000007 0.0003848 1414 9.85 3.69 7.24 2020-09-06 23:44:28.729093075 INFO 2024-04-09 23:19:27,374Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.382 0.0000056 -0.0000102 197 1.43 -0.67 -1.32 2020-09-06 23:45:54.739021063 INFO 2024-04-09 23:19:27,377Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.374 0.0001646 0.0000357 296 2.23 1.51 2.97 2020-09-06 23:48:09.061228991 INFO 2024-04-09 23:19:27,380Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.378 -0.0004263 0.0009976 18196 122.52 0.77 1.51 2020-09-07 01:50:40.856949091 INFO 2024-04-09 23:19:27,386Z lrauvNc4ToNetcdf.py nudge_coords():871 17: - - - 1036 7.56 - - INFO 2024-04-09 23:19:27,386Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 30805 INFO 2024-04-09 23:19:27,418Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200906T212732/20200907T025815/data.csv INFO 2024-04-09 23:19:27,514Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:27,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:27,857Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:28,067Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200906T222722/202009062227_202009070158_2S_scieng.nc INFO 2024-04-09 23:19:28,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009062227_202009070158.nc4 INFO 2024-04-09 23:19:28,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T015815/202009070158_202009070426.nc4 file... INFO 2024-04-09 23:19:28,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009070158_202009070426.nc4 INFO 2024-04-09 23:19:29,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T015815/202009070158_202009070426.nc4 INFO 2024-04-09 23:19:29,165Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,244Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,319Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,394Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,475Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,548Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,618Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,691Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,763Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,835Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,909Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:29,981Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,062Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,139Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,214Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,284Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:30,348Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:30,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:30,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:30,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:30,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:30,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:30,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:30,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:30,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:30,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:30,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:30,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:30,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:30,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:30,461Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:30,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:30,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:30,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:30,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:30,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:30,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:30,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:30,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:30,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:30,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:30,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:30,630Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:30,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:30,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:30,642Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:30,673Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:30,705Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:30,764Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 15 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:30,965Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:31,000Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 15 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:31,204Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:31,238Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 15 v_t values found before 2020-09-07 01:58:00 and after 2020-09-07 04:26:00 INFO 2024-04-09 23:19:31,424Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:31,425Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T015815/202009070158_202009070426.nc4 INFO 2024-04-09 23:19:31,575Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 21950 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:31,677Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 7 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T015815/202009070158_202009070426.nc4 INFO 2024-04-09 23:19:31,678Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:31,679Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 257 1.72 - - - INFO 2024-04-09 23:19:31,680Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.382 -0.0000887 0.0002500 951 6.40 3.70 7.24 2020-09-07 02:06:23.546363115 INFO 2024-04-09 23:19:31,683Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.389 -0.0002503 -0.0000257 823 5.54 -0.44 -0.86 2020-09-07 02:11:56.080602884 INFO 2024-04-09 23:19:31,685Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.391 -0.0001626 0.0002326 820 5.52 4.00 7.82 2020-09-07 02:17:27.443892956 INFO 2024-04-09 23:19:31,688Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.394 0.0000853 -0.0000264 147 0.98 -2.54 -4.97 2020-09-07 02:18:26.856425047 INFO 2024-04-09 23:19:31,690Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.349 -0.0000884 -0.0000694 202 1.36 -4.85 -9.48 2020-09-07 02:19:48.640372992 INFO 2024-04-09 23:19:31,693Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.386 0.0023179 0.0018457 18368 123.68 1.42 2.77 2020-09-07 04:23:30.019872904 INFO 2024-04-09 23:19:31,699Z lrauvNc4ToNetcdf.py nudge_coords():871 7: - - - 381 2.60 - - INFO 2024-04-09 23:19:31,699Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 21949 INFO 2024-04-09 23:19:31,728Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T005815/20200907T052606/data.csv INFO 2024-04-09 23:19:31,825Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:31,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:32,156Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:32,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T015815/202009070158_202009070426_2S_scieng.nc INFO 2024-04-09 23:19:32,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009070158_202009070426.nc4 INFO 2024-04-09 23:19:33,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T042606/202009070426_202009072134.nc4 file... INFO 2024-04-09 23:19:33,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009070426_202009072134.nc4 INFO 2024-04-09 23:19:33,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T042606/202009070426_202009072134.nc4 INFO 2024-04-09 23:19:33,845Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,006Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,164Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,325Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,490Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,626Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,762Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:34,905Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,036Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,165Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,300Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,434Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,572Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,713Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,846Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:35,980Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:36,100Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,106Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:36,108Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:36,115Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:36,125Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:36,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:36,169Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 7 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:36,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:36,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:36,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:36,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:36,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:36,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:36,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:36,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:36,266Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:36,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:36,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:19:36,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:19:36,361Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:19:36,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:19:36,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:19:36,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:36,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:36,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:36,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:36,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:36,399Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:36,423Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:36,550Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:36,678Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:36,850Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 73 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:36,978Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:37,030Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 73 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:37,155Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:37,206Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 73 v_t values found before 2020-09-07 04:26:00 and after 2020-09-07 21:34:00 INFO 2024-04-09 23:19:37,332Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:37,333Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T042606/202009070426_202009072134.nc4 INFO 2024-04-09 23:19:37,609Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 152371 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:37,714Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 46 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T042606/202009070426_202009072134.nc4 INFO 2024-04-09 23:19:37,715Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:37,717Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 486 3.27 - - - INFO 2024-04-09 23:19:37,718Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.381 -0.0000325 0.0000142 38 0.25 5.38 10.51 2020-09-07 04:29:38.394761086 INFO 2024-04-09 23:19:37,721Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.416 -0.0000680 0.0000757 315 2.11 3.40 6.63 2020-09-07 04:31:45.656502962 INFO 2024-04-09 23:19:37,725Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.384 0.0005832 0.0001094 6992 47.07 0.22 0.43 2020-09-07 05:18:50.446198940 INFO 2024-04-09 23:19:37,729Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.372 0.0000227 -0.0000221 210 1.63 -1.28 -2.52 2020-09-07 05:20:28.595741034 INFO 2024-04-09 23:19:37,733Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.355 0.0007842 -0.0001293 4657 31.35 -0.39 -0.76 2020-09-07 05:51:50.037933111 INFO 2024-04-09 23:19:37,738Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.375 0.0000411 -0.0000356 194 1.42 -2.35 -4.65 2020-09-07 05:53:15.619968891 INFO 2024-04-09 23:19:37,742Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.359 -0.0001284 0.0000957 8442 56.84 0.16 0.31 2020-09-07 06:50:06.236443996 INFO 2024-04-09 23:19:37,747Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.373 -0.0000986 -0.0001230 171 1.27 -9.09 -17.99 2020-09-07 06:51:22.633002043 INFO 2024-04-09 23:19:37,752Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.392 -0.0001344 0.0002086 7415 49.92 0.39 0.77 2020-09-07 07:41:18.322652102 INFO 2024-04-09 23:19:37,757Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.390 -0.0000462 0.0000320 259 1.90 1.58 3.12 2020-09-07 07:43:12.800731897 INFO 2024-04-09 23:19:37,760Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.385 0.0000945 -0.0000255 7138 48.06 -0.05 -0.10 2020-09-07 08:31:16.560982943 INFO 2024-04-09 23:19:37,765Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.390 -0.0000532 -0.0000101 95 0.73 -1.30 -2.57 2020-09-07 08:32:00.651865005 INFO 2024-04-09 23:19:37,768Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.361 -0.0002419 0.0001183 8478 57.08 0.19 0.38 2020-09-07 09:29:05.816442013 INFO 2024-04-09 23:19:37,774Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.376 -0.0000102 0.0002761 80 0.63 41.39 81.74 2020-09-07 09:29:43.743940115 INFO 2024-04-09 23:19:37,777Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.368 -0.0000673 0.0000110 7181 48.35 0.02 0.04 2020-09-07 10:18:04.884449959 INFO 2024-04-09 23:19:37,782Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 0.0000238 0.0000028 86 0.67 0.39 0.77 2020-09-07 10:18:45.386951923 INFO 2024-04-09 23:19:37,786Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.373 -0.0002102 0.0000351 8466 57.00 0.06 0.11 2020-09-07 11:15:45.666023970 INFO 2024-04-09 23:19:37,791Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.389 -0.0000776 -0.0000485 214 1.59 -2.86 -5.66 2020-09-07 11:17:21.275810957 INFO 2024-04-09 23:19:37,795Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.372 0.0003768 -0.0001643 8505 57.26 -0.27 -0.53 2020-09-07 12:14:37.312211990 INFO 2024-04-09 23:19:37,800Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.374 -0.0000946 0.0000259 168 1.25 1.93 3.83 2020-09-07 12:15:52.720061064 INFO 2024-04-09 23:19:37,804Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.370 -0.0002868 0.0001774 8462 56.97 0.29 0.58 2020-09-07 13:12:51.373078108 INFO 2024-04-09 23:19:37,809Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.376 0.0000161 -0.0000268 161 1.17 -2.15 -4.24 2020-09-07 13:14:02.007051945 INFO 2024-04-09 23:19:37,813Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.376 -0.0000876 -0.0000191 8419 56.68 -0.03 -0.06 2020-09-07 14:10:43.275960922 INFO 2024-04-09 23:19:37,819Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.350 -0.0000887 0.0000677 95 0.73 8.76 17.29 2020-09-07 14:11:27.220067978 INFO 2024-04-09 23:19:37,822Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.381 0.0000483 0.0000285 8594 57.86 0.05 0.09 2020-09-07 15:09:19.164203882 INFO 2024-04-09 23:19:37,827Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.374 -0.0000732 0.0000272 117 0.87 2.93 5.78 2020-09-07 15:10:11.832155943 INFO 2024-04-09 23:19:37,831Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.381 0.0005150 0.0000023 8543 57.52 0.00 0.01 2020-09-07 16:07:43.204063892 INFO 2024-04-09 23:19:37,836Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.371 0.0000194 0.0000150 116 0.87 1.62 3.20 2020-09-07 16:08:35.768162012 INFO 2024-04-09 23:19:37,840Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.362 0.0002414 -0.0000425 7070 47.60 -0.08 -0.17 2020-09-07 16:56:12.062783003 INFO 2024-04-09 23:19:37,846Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.374 0.0000718 -0.0000494 200 1.51 -3.07 -6.07 2020-09-07 16:57:43.064382076 INFO 2024-04-09 23:19:37,849Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.362 -0.0001144 -0.0001172 8575 57.73 -0.19 -0.38 2020-09-07 17:55:27.406383038 INFO 2024-04-09 23:19:37,854Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.370 0.0000727 -0.0000272 338 2.49 -1.02 -2.02 2020-09-07 17:57:57.456712961 INFO 2024-04-09 23:19:37,858Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.368 -0.0003946 -0.0000342 5708 38.43 -0.08 -0.16 2020-09-07 18:36:23.494136095 INFO 2024-04-09 23:19:37,863Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.386 -0.0008356 0.0002249 969 6.64 3.18 6.28 2020-09-07 18:43:02.052160978 INFO 2024-04-09 23:19:37,867Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.326 0.0000240 -0.0000521 213 1.43 -3.42 -6.75 2020-09-07 18:44:28.170063972 INFO 2024-04-09 23:19:37,870Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.373 0.0000108 0.0000955 239 1.60 5.59 11.05 2020-09-07 18:46:04.682019949 INFO 2024-04-09 23:19:37,874Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.370 0.0000309 -0.0001237 1302 8.76 -1.32 -2.62 2020-09-07 18:54:50.693509102 INFO 2024-04-09 23:19:37,877Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.369 0.0001035 -0.0008487 302 2.18 -36.54 -72.22 2020-09-07 18:57:01.732749939 INFO 2024-04-09 23:19:37,881Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.368 0.0003655 -0.0002410 4462 30.04 -0.75 -1.49 2020-09-07 19:27:04.391241074 INFO 2024-04-09 23:19:37,887Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.342 0.0000169 -0.0000193 75 0.50 -3.62 -7.17 2020-09-07 19:27:34.714540005 INFO 2024-04-09 23:19:37,891Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.374 -0.0002608 0.0000389 5969 40.19 0.09 0.18 2020-09-07 20:07:46.247961998 INFO 2024-04-09 23:19:37,896Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.384 -0.0000491 0.0000322 97 0.74 4.08 8.06 2020-09-07 20:08:31.058029890 INFO 2024-04-09 23:19:37,900Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.383 -0.0001680 0.0000186 6279 42.27 0.04 0.08 2020-09-07 20:50:47.778094053 INFO 2024-04-09 23:19:37,905Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.365 0.0001160 0.0001502 147 1.08 13.06 25.88 2020-09-07 20:51:52.726233959 INFO 2024-04-09 23:19:37,909Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.378 -0.0001448 0.0000566 6267 42.19 0.13 0.25 2020-09-07 21:34:04.592046976 INFO 2024-04-09 23:19:37,914Z lrauvNc4ToNetcdf.py nudge_coords():871 46: - - - 61 0.47 - - INFO 2024-04-09 23:19:37,915Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 152370 INFO 2024-04-09 23:19:37,951Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T032606/20200907T223433/data.csv INFO 2024-04-09 23:19:38,051Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:38,063Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:38,409Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:38,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T042606/202009070426_202009072134_2S_scieng.nc INFO 2024-04-09 23:19:38,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009070426_202009072134.nc4 INFO 2024-04-09 23:19:38,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T213438/202009072134_202009072146.nc4 file... INFO 2024-04-09 23:19:38,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009072134_202009072146.nc4 INFO 2024-04-09 23:19:39,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T213438/202009072134_202009072146.nc4 INFO 2024-04-09 23:19:39,266Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,321Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,374Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,427Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,480Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,532Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,585Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,637Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,690Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,744Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,800Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,853Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,907Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:39,971Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,038Z lrauvNc4ToNetcdf.py createSeries():299 depth : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,102Z lrauvNc4ToNetcdf.py createSeries():299 time : 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:40,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:40,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:40,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:40,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:40,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:40,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:40,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:40,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:40,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:40,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:40,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:40,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:40,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:40,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:40,181Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 39 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:40,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:40,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:40,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:40,199Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:40,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:40,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:40,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:40,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:40,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:40,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:40,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:40,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:19:40,232Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:40,237Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:40,243Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:40,273Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 38 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,315Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:40,341Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 38 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,394Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:40,414Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 38 v_t values found before 2020-09-07 21:34:00 and after 2020-09-07 21:46:00 INFO 2024-04-09 23:19:40,457Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:40,458Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T213438/202009072134_202009072146.nc4 INFO 2024-04-09 23:19:40,555Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1238 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:40,643Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T213438/202009072134_202009072146.nc4 INFO 2024-04-09 23:19:40,643Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:40,644Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:19:40,645Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 0.0000751 -0.0000243 176 1.27 -1.80 -3.56 2020-09-07 21:38:48.861006975 INFO 2024-04-09 23:19:40,647Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.391 -0.0003394 -0.0008146 992 6.95 -11.00 -21.72 2020-09-07 21:45:46.164614916 INFO 2024-04-09 23:19:40,649Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 69 0.49 - - INFO 2024-04-09 23:19:40,650Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1237 INFO 2024-04-09 23:19:40,671Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T203449/20200907T224616/data.csv INFO 2024-04-09 23:19:40,765Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:40,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:41,091Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:41,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T213438/202009072134_202009072146_2S_scieng.nc INFO 2024-04-09 23:19:41,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009072134_202009072146.nc4 INFO 2024-04-09 23:19:41,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T214617/202009072146_202009072152.nc4 file... INFO 2024-04-09 23:19:41,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009072146_202009072152.nc4 INFO 2024-04-09 23:19:42,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T214617/202009072146_202009072152.nc4 INFO 2024-04-09 23:19:42,279Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,332Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,385Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,439Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,493Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,545Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,599Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,654Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,709Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,762Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,815Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,881Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,934Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:42,986Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,040Z lrauvNc4ToNetcdf.py createSeries():299 depth : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,093Z lrauvNc4ToNetcdf.py createSeries():299 time : 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:43,135Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:43,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:43,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:43,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:43,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:43,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:43,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:43,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:43,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:43,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:43,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:43,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:43,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:43,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:43,169Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 27 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:43,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:43,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:43,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:43,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:43,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:43,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:43,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:43,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:43,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:19:43,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:19:43,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:43,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:19:43,211Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:43,215Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,219Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:43,220Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:43,247Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,488Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:43,506Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:43,748Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:43,766Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 26 v_t values found before 2020-09-07 21:46:00 and after 2020-09-07 21:52:00 INFO 2024-04-09 23:19:44,008Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:44,009Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T214617/202009072146_202009072152.nc4 INFO 2024-04-09 23:19:44,099Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 420 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:44,187Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T214617/202009072146_202009072152.nc4 INFO 2024-04-09 23:19:44,187Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:44,188Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:19:44,189Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.392 0.0001186 -0.0000161 164 1.28 -1.19 -2.35 2020-09-07 21:50:18.180527925 INFO 2024-04-09 23:19:44,191Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 255 1.85 - - INFO 2024-04-09 23:19:44,192Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 419 INFO 2024-04-09 23:19:44,210Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T204628/20200907T225210/data.csv INFO 2024-04-09 23:19:44,309Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:44,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:44,588Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:44,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T214617/202009072146_202009072152_2S_scieng.nc INFO 2024-04-09 23:19:44,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009072146_202009072152.nc4 INFO 2024-04-09 23:19:45,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T215324/202009072153_202009072306.nc4 file... INFO 2024-04-09 23:19:45,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009072153_202009072306.nc4 INFO 2024-04-09 23:19:45,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T215324/202009072153_202009072306.nc4 INFO 2024-04-09 23:19:46,005Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,088Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,169Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,249Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,330Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,415Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,510Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,607Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,685Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,764Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,861Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:46,957Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,054Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,133Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,217Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,297Z lrauvNc4ToNetcdf.py createSeries():299 time : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:47,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:47,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:47,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:47,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:47,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:47,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:47,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:47,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:47,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:47,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:47,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:47,417Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:47,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:47,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:47,428Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:47,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:47,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:47,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:47,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:47,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:47,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:47,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:47,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:47,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:47,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:47,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:47,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:47,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:47,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:47,532Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:47,548Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:47,564Z lrauvNc4ToNetcdf.py createSeries():299 depth : 51 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:47,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:47,617Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 50 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:48,232Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:48,264Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 50 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:48,879Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:48,919Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 50 v_t values found before 2020-09-07 21:53:00 and after 2020-09-07 23:06:00 INFO 2024-04-09 23:19:49,558Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:49,559Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T215324/202009072153_202009072306.nc4 INFO 2024-04-09 23:19:49,712Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10265 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:49,839Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 10 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T215324/202009072153_202009072306.nc4 INFO 2024-04-09 23:19:49,839Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:49,840Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:19:49,841Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.374 0.0001626 -0.0000348 165 1.27 -2.57 -5.08 2020-09-07 21:57:25.914074898 INFO 2024-04-09 23:19:49,843Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.392 -0.0003022 0.0008333 797 5.39 14.49 28.66 2020-09-07 22:02:49.639946938 INFO 2024-04-09 23:19:49,845Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.384 0.0016010 -0.0000233 1127 7.80 -0.28 -0.55 2020-09-07 22:10:37.980859041 INFO 2024-04-09 23:19:49,848Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.369 -0.0002699 -0.0002460 429 3.16 -7.30 -14.44 2020-09-07 22:13:47.765316010 INFO 2024-04-09 23:19:49,850Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.387 -0.0004800 0.0006077 338 2.47 23.08 45.68 2020-09-07 22:16:16.068260908 INFO 2024-04-09 23:19:49,852Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.407 0.0000898 -0.0001251 3006 20.24 -0.58 -1.14 2020-09-07 22:36:31.173041105 INFO 2024-04-09 23:19:49,855Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.357 0.0002433 0.0001569 613 4.18 3.51 6.95 2020-09-07 22:40:42.589128971 INFO 2024-04-09 23:19:49,857Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.356 -0.0005578 0.0002943 78 0.53 52.46 103.83 2020-09-07 22:41:14.487265110 INFO 2024-04-09 23:19:49,860Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.375 -0.0000155 -0.0000019 3004 20.23 -0.01 -0.02 2020-09-07 23:01:28.560031891 INFO 2024-04-09 23:19:49,863Z lrauvNc4ToNetcdf.py nudge_coords():871 10: - - - 707 4.85 - - INFO 2024-04-09 23:19:49,863Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10264 INFO 2024-04-09 23:19:49,904Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T205336/20200908T000620/data.csv INFO 2024-04-09 23:19:50,000Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:50,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:50,453Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:50,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T215324/202009072153_202009072306_2S_scieng.nc INFO 2024-04-09 23:19:50,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009072153_202009072306.nc4 INFO 2024-04-09 23:19:51,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T230620/202009072306_202009080006.nc4 file... INFO 2024-04-09 23:19:51,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009072306_202009080006.nc4 INFO 2024-04-09 23:19:51,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T230620/202009072306_202009080006.nc4 INFO 2024-04-09 23:19:51,812Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:51,909Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,011Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,126Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,223Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,319Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,456Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,564Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,663Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,763Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,871Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:52,978Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,082Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,178Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,256Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,344Z lrauvNc4ToNetcdf.py createSeries():299 time : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:53,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:53,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:53,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:53,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:53,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:53,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:19:53,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:53,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:53,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:19:53,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:19:53,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:53,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:19:53,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:53,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:19:53,469Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:53,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:53,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:19:53,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:19:53,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:19:53,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:19:53,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:19:53,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:53,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:19:53,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:53,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:53,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:53,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:53,515Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:53,529Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:53,542Z lrauvNc4ToNetcdf.py createSeries():299 depth : 5 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:53,591Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 4 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,685Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:53,716Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 4 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,812Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:53,843Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 4 v_t values found before 2020-09-07 23:06:00 and after 2020-09-08 00:06:00 INFO 2024-04-09 23:19:53,940Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:53,940Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T230620/202009072306_202009080006.nc4 INFO 2024-04-09 23:19:54,096Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8842 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:54,228Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T230620/202009072306_202009080006.nc4 INFO 2024-04-09 23:19:54,229Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:54,230Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 183 1.23 - - - INFO 2024-04-09 23:19:54,230Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.380 0.0001997 -0.0000358 580 3.90 -0.86 -1.70 2020-09-07 23:11:28.575922012 INFO 2024-04-09 23:19:54,233Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.373 0.0000260 0.0000505 159 1.06 4.43 8.80 2020-09-07 23:12:32.828192949 INFO 2024-04-09 23:19:54,236Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.384 0.0002756 -0.0000062 6980 46.99 -0.01 -0.02 2020-09-07 23:59:32.779076099 INFO 2024-04-09 23:19:54,239Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.378 0.0000445 0.0000197 38 0.25 7.54 14.61 2020-09-07 23:59:48.137069941 INFO 2024-04-09 23:19:54,242Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 901 6.21 - - INFO 2024-04-09 23:19:54,242Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8841 INFO 2024-04-09 23:19:54,273Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T220620/20200908T010601/data.csv INFO 2024-04-09 23:19:54,369Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:54,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:54,758Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:55,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200907T230620/202009072306_202009080006_2S_scieng.nc INFO 2024-04-09 23:19:55,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009072306_202009080006.nc4 INFO 2024-04-09 23:19:55,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T000601/202009080006_202009080037.nc4 file... INFO 2024-04-09 23:19:55,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080006_202009080037.nc4 INFO 2024-04-09 23:19:56,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T000601/202009080006_202009080037.nc4 INFO 2024-04-09 23:19:56,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:19:56,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:19:56,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:19:56,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:19:56,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:19:56,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:19:56,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:19:56,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:19:56,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:19:56,956Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 33 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:19:56,962Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 33 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:19:56,969Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 7 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:19:56,975Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 7 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:19:56,981Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 7 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:19:56,987Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 7 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:56,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:19:57,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:19:57,001Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,007Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:19:57,009Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:19:57,016Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:19:57,024Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:19:57,031Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:19:57,038Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:19:57,045Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:19:57,051Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 66 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:19:57,057Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:57,062Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 6 v_t values found before 2020-09-08 00:06:00 and after 2020-09-08 00:37:00 INFO 2024-04-09 23:19:57,065Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:19:57,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:19:57,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:19:57,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:19:57,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:19:57,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:57,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:57,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:19:57,182Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:57,245Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:57,305Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:19:57,306Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T000601/202009080006_202009080037.nc4 INFO 2024-04-09 23:19:57,441Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 4566 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:19:57,565Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T000601/202009080006_202009080037.nc4 INFO 2024-04-09 23:19:57,566Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:19:57,567Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 29 0.19 - - - INFO 2024-04-09 23:19:57,568Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.351 -0.0000715 0.0001363 435 2.92 4.45 8.64 2020-09-08 00:09:12.960602045 INFO 2024-04-09 23:19:57,570Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.388 0.0000300 -0.0000411 217 1.46 -2.70 -5.23 2020-09-08 00:10:40.659380913 INFO 2024-04-09 23:19:57,572Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 3884 26.15 - - INFO 2024-04-09 23:19:57,572Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 4565 INFO 2024-04-09 23:19:57,605Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T230602/20200908T013650/data.csv INFO 2024-04-09 23:19:57,701Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:19:57,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:19:58,245Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:19:58,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T000601/202009080006_202009080037_2S_scieng.nc INFO 2024-04-09 23:19:58,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080006_202009080037.nc4 INFO 2024-04-09 23:19:59,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T003856/202009080039_202009080049.nc4 file... INFO 2024-04-09 23:19:59,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080039_202009080049.nc4 INFO 2024-04-09 23:19:59,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T003856/202009080039_202009080049.nc4 INFO 2024-04-09 23:19:59,568Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,620Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,672Z lrauvNc4ToNetcdf.py createSeries():299 depth : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,725Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,779Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,832Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,887Z lrauvNc4ToNetcdf.py createSeries():299 depth : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,939Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:19:59,994Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,072Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,128Z lrauvNc4ToNetcdf.py createSeries():299 depth : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,184Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,241Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,321Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,381Z lrauvNc4ToNetcdf.py createSeries():299 depth : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,444Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:00,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:00,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:00,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:00,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:00,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:00,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:00,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:00,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:00,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:20:00,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:20:00,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:00,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:00,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:00,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:00,524Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 62 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:00,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:00,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:00,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:00,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:00,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:00,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:00,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:00,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:00,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:00,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:00,569Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:00,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:20:00,575Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:00,580Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:00,585Z lrauvNc4ToNetcdf.py createSeries():299 depth : 61 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:00,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:00,615Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 60 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:01,153Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:01,175Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 60 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:01,688Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:01,716Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 60 v_t values found before 2020-09-08 00:39:00 and after 2020-09-08 00:49:00 INFO 2024-04-09 23:20:02,271Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:02,272Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T003856/202009080039_202009080049.nc4 INFO 2024-04-09 23:20:02,378Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 419 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:02,495Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T003856/202009080039_202009080049.nc4 INFO 2024-04-09 23:20:02,496Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:02,497Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:02,498Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 0.0001262 0.0000087 147 0.98 0.84 1.63 2020-09-08 00:47:34.432328939 INFO 2024-04-09 23:20:02,500Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 271 1.82 - - INFO 2024-04-09 23:20:02,500Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 418 INFO 2024-04-09 23:20:02,527Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T233909/20200908T014924/data.csv INFO 2024-04-09 23:20:02,624Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:02,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:03,260Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:03,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T003856/202009080039_202009080049_2S_scieng.nc INFO 2024-04-09 23:20:03,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080039_202009080049.nc4 INFO 2024-04-09 23:20:04,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T005020/202009080050_202009080104.nc4 file... INFO 2024-04-09 23:20:04,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080050_202009080104.nc4 INFO 2024-04-09 23:20:08,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T005020/202009080050_202009080104.nc4 INFO 2024-04-09 23:20:08,182Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,259Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,331Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,406Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,481Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,570Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,641Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,717Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,792Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,869Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:08,943Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,028Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,121Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,229Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,340Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,453Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:09,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:09,545Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:09,549Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:09,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:09,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:09,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:09,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:09,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:09,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:20:09,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:20:09,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:09,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:09,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:09,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:09,579Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:09,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:09,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:09,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:09,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:09,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:09,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:09,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:09,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:09,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:09,626Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:09,630Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:09,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:20:09,633Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:09,640Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,645Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:09,647Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,653Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:09,697Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 24 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,790Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:09,834Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 24 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:09,920Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:09,963Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 24 v_t values found before 2020-09-08 00:50:00 and after 2020-09-08 01:04:00 INFO 2024-04-09 23:20:10,050Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:10,050Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T005020/202009080050_202009080104.nc4 INFO 2024-04-09 23:20:10,253Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1670 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:10,455Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T005020/202009080050_202009080104.nc4 INFO 2024-04-09 23:20:10,455Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:10,456Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:10,457Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.383 0.0001307 -0.0000855 175 1.26 -6.46 -12.53 2020-09-08 00:54:01.900111914 INFO 2024-04-09 23:20:10,459Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.398 0.0008493 -0.0003836 833 5.67 -6.46 -12.54 2020-09-08 00:59:42.485341072 INFO 2024-04-09 23:20:10,461Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 661 4.45 - - INFO 2024-04-09 23:20:10,462Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1669 INFO 2024-04-09 23:20:10,504Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200907T235032/20200908T020410/data.csv INFO 2024-04-09 23:20:10,611Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:10,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:10,826Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:10,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T005020/202009080050_202009080104_2S_scieng.nc INFO 2024-04-09 23:20:10,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080050_202009080104.nc4 INFO 2024-04-09 23:20:11,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T010603/202009080106_202009080112.nc4 file... INFO 2024-04-09 23:20:11,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080106_202009080112.nc4 INFO 2024-04-09 23:20:11,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T010603/202009080106_202009080112.nc4 INFO 2024-04-09 23:20:11,692Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:11,761Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:11,827Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:11,893Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:11,960Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,026Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,090Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,154Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,218Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,285Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,348Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,412Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,476Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,540Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,606Z lrauvNc4ToNetcdf.py createSeries():299 depth : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,688Z lrauvNc4ToNetcdf.py createSeries():299 time : 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:12,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:12,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:12,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:12,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:12,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:12,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:12,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:12,765Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:12,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:20:12,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:20:12,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:12,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:12,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:12,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:12,776Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 114 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:12,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:12,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:12,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:12,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:12,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:12,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:12,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:12,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:12,818Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:12,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:12,829Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:12,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:20:12,835Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:12,841Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:12,847Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:12,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:12,883Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 112 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:14,071Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:14,094Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 112 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:15,276Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:15,298Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 112 v_t values found before 2020-09-08 01:06:00 and after 2020-09-08 01:12:00 INFO 2024-04-09 23:20:16,428Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:16,429Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T010603/202009080106_202009080112.nc4 INFO 2024-04-09 23:20:16,538Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 650 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:16,652Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T010603/202009080106_202009080112.nc4 INFO 2024-04-09 23:20:16,652Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:16,653Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:16,653Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.383 0.0000989 0.0001118 164 1.27 8.43 16.34 2020-09-08 01:09:23.304894924 INFO 2024-04-09 23:20:16,656Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 485 3.35 - - INFO 2024-04-09 23:20:16,656Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 649 INFO 2024-04-09 23:20:16,680Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200908T000615/20200908T021245/data.csv INFO 2024-04-09 23:20:16,782Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:16,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:17,028Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:17,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T010603/202009080106_202009080112_2S_scieng.nc INFO 2024-04-09 23:20:17,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080106_202009080112.nc4 INFO 2024-04-09 23:20:17,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T011342/202009080113_202009080217.nc4 file... INFO 2024-04-09 23:20:17,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080113_202009080217.nc4 INFO 2024-04-09 23:20:18,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T011342/202009080113_202009080217.nc4 INFO 2024-04-09 23:20:18,344Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,451Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,546Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,644Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,746Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,853Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:18,956Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,054Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,155Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,247Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,342Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,437Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,533Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,632Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,737Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,852Z lrauvNc4ToNetcdf.py createSeries():299 time : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:19,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:19,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:19,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:19,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:19,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:19,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:19,955Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:19,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:19,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:19,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:19,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:19,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:19,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:19,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:20,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:20,004Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:20,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:20,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:20,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:20,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:20,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:20,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:20,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:20:20,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:20:20,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:20,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:20,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:20,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:20,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:20,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:20,124Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:20,143Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:20,161Z lrauvNc4ToNetcdf.py createSeries():299 depth : 64 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:20,231Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 62 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,334Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:20,381Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 62 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,490Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:20,533Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 62 v_t values found before 2020-09-08 01:13:00 and after 2020-09-08 02:17:00 INFO 2024-04-09 23:20:20,609Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:20,610Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T011342/202009080113_202009080217.nc4 INFO 2024-04-09 23:20:20,810Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 9077 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:21,047Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 10 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T011342/202009080113_202009080217.nc4 INFO 2024-04-09 23:20:21,047Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:21,048Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:21,049Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.377 0.0000635 -0.0000045 34 0.22 -1.93 -3.74 2020-09-08 01:15:39.960216045 INFO 2024-04-09 23:20:21,051Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.385 0.0001867 0.0001080 279 2.04 5.07 9.82 2020-09-08 01:17:42.693737984 INFO 2024-04-09 23:20:21,053Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.398 0.0005852 0.0001653 914 6.32 2.50 4.85 2020-09-08 01:24:02.018657923 INFO 2024-04-09 23:20:21,056Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.366 0.0002162 0.0000258 185 1.25 1.98 3.83 2020-09-08 01:25:17.347141027 INFO 2024-04-09 23:20:21,058Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.388 0.0003011 -0.0001289 167 1.12 -11.03 -21.36 2020-09-08 01:26:24.837625027 INFO 2024-04-09 23:20:21,060Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.379 0.0003483 0.0001161 3028 20.39 0.55 1.06 2020-09-08 01:46:48.777901888 INFO 2024-04-09 23:20:21,063Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.361 0.0004736 0.0000275 660 4.85 0.54 1.05 2020-09-08 01:51:40.075900078 INFO 2024-04-09 23:20:21,065Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.377 0.0001351 0.0001220 121 0.81 14.47 27.97 2020-09-08 01:52:28.951189041 INFO 2024-04-09 23:20:21,068Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.375 0.0000163 -0.0000775 3047 20.52 -0.36 -0.70 2020-09-08 02:13:00.547239065 INFO 2024-04-09 23:20:21,071Z lrauvNc4ToNetcdf.py nudge_coords():871 10: - - - 641 4.40 - - INFO 2024-04-09 23:20:21,072Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 9076 INFO 2024-04-09 23:20:21,124Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200908T001353/20200908T031725/data.csv INFO 2024-04-09 23:20:21,225Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:20:21,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:20:21,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:20:21,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:21,524Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:21,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T011342/202009080113_202009080217_2S_scieng.nc INFO 2024-04-09 23:20:21,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080113_202009080217.nc4 INFO 2024-04-09 23:20:22,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T021725/202009080217_202009081711.nc4 file... INFO 2024-04-09 23:20:22,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009080217_202009081711.nc4 INFO 2024-04-09 23:20:23,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T021725/202009080217_202009081711.nc4 INFO 2024-04-09 23:20:23,445Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:23,633Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:23,824Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,024Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,210Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,376Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,539Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,706Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:24,872Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,050Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,226Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,409Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,581Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,745Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:25,918Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:26,107Z lrauvNc4ToNetcdf.py createSeries():299 time : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:26,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:26,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:26,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:26,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:26,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:26,304Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:26,310Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:26,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:26,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:26,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:26,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:26,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:26,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:26,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:26,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:26,500Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:26,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:26,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:26,612Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:26,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:26,645Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:26,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:26,678Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:26,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:20:26,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:20:26,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:26,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:26,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:26,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:26,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:26,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:26,764Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:26,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:26,882Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:26,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:27,000Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:27,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:27,171Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 50 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:28,006Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:28,074Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 50 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:28,999Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:29,070Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 50 v_t values found before 2020-09-08 02:17:00 and after 2020-09-08 17:11:00 INFO 2024-04-09 23:20:30,024Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:30,025Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T021725/202009080217_202009081711.nc4 INFO 2024-04-09 23:20:30,382Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 131998 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:30,550Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 43 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T021725/202009080217_202009081711.nc4 INFO 2024-04-09 23:20:30,550Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:30,552Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 103 0.69 - - - INFO 2024-04-09 23:20:30,554Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.391 0.0001048 0.0000946 579 3.89 2.32 4.50 2020-09-08 02:22:33.397708893 INFO 2024-04-09 23:20:30,557Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.316 0.0000201 -0.0000167 129 0.86 -1.85 -3.58 2020-09-08 02:23:25.598140001 INFO 2024-04-09 23:20:30,560Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.389 0.0002022 -0.0000632 7074 47.62 -0.13 -0.25 2020-09-08 03:11:03.428608894 INFO 2024-04-09 23:20:30,565Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.393 0.0002541 -0.0000345 337 2.45 -1.38 -2.61 2020-09-08 03:13:31.070660114 INFO 2024-04-09 23:20:30,568Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0006018 -0.0010687 7301 49.15 -2.18 -4.03 2020-09-08 04:02:40.699765921 INFO 2024-04-09 23:20:30,573Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.367 0.0013053 -0.0002939 476 3.54 -8.30 -15.37 2020-09-08 04:06:13.762010098 INFO 2024-04-09 23:20:30,577Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.381 0.0030014 0.0035136 7797 52.49 6.87 12.40 2020-09-08 04:58:43.766942024 INFO 2024-04-09 23:20:30,581Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.385 0.0004653 -0.0000833 385 2.93 -2.91 -5.26 2020-09-08 05:01:40.090756893 INFO 2024-04-09 23:20:30,585Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.322 0.0009039 0.0004806 6913 46.54 1.08 1.91 2020-09-08 05:48:13.143167019 INFO 2024-04-09 23:20:30,589Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.373 0.0002280 0.0001644 223 1.68 10.29 18.18 2020-09-08 05:49:54.032798052 INFO 2024-04-09 23:20:30,593Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.361 0.0003922 -0.0005748 7067 47.58 -1.29 -2.24 2020-09-08 06:37:29.130292892 INFO 2024-04-09 23:20:30,598Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.360 0.0000240 -0.0001097 265 1.98 -5.94 -10.28 2020-09-08 06:39:28.091243029 INFO 2024-04-09 23:20:30,601Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.358 -0.0005351 -0.0000235 7225 48.64 -0.05 -0.09 2020-09-08 07:28:07.003021002 INFO 2024-04-09 23:20:30,606Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.346 0.0000063 -0.0002171 235 1.78 -13.25 -22.54 2020-09-08 07:29:54.442967892 INFO 2024-04-09 23:20:30,609Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.375 0.0005791 0.0002299 7056 47.50 0.53 0.90 2020-09-08 08:17:25.041832924 INFO 2024-04-09 23:20:30,614Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.394 -0.0001159 0.0000318 117 0.92 3.82 6.40 2020-09-08 08:18:20.703897953 INFO 2024-04-09 23:20:30,617Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.367 0.0002239 0.0001609 7099 47.79 0.38 0.62 2020-09-08 09:06:08.746107101 INFO 2024-04-09 23:20:30,622Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.371 0.0000515 -0.0000085 184 1.36 -0.70 -1.16 2020-09-08 09:07:30.913835049 INFO 2024-04-09 23:20:30,626Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.363 -0.0010509 -0.0017593 7118 47.92 -4.17 -6.80 2020-09-08 09:55:26.647603989 INFO 2024-04-09 23:20:30,630Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 -0.0000638 -0.0000615 158 1.23 -5.71 -9.30 2020-09-08 09:56:40.543869972 INFO 2024-04-09 23:20:30,634Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.364 -0.0033783 -0.0028724 3765 25.34 -12.98 -21.00 2020-09-08 10:22:01.618015051 INFO 2024-04-09 23:20:30,637Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.346 -0.0000840 -0.0000532 128 0.99 -6.13 -9.91 2020-09-08 10:23:01.622709990 INFO 2024-04-09 23:20:30,641Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.382 -0.0023378 -0.0015853 8456 56.93 -3.19 -5.16 2020-09-08 11:19:57.843673944 INFO 2024-04-09 23:20:30,647Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.383 -0.0001817 -0.0001425 193 1.43 -11.43 -18.46 2020-09-08 11:21:24.053919077 INFO 2024-04-09 23:20:30,650Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.383 -0.0032247 -0.0033274 7166 48.24 -7.88 -12.78 2020-09-08 12:09:39.118290901 INFO 2024-04-09 23:20:30,655Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.368 0.0000038 -0.0000508 160 1.22 -4.78 -7.75 2020-09-08 12:10:52.438026905 INFO 2024-04-09 23:20:30,659Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.388 -0.0031526 -0.0035504 8535 57.46 -7.07 -11.45 2020-09-08 13:08:20.567688942 INFO 2024-04-09 23:20:30,664Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.384 0.0000768 0.0000090 245 1.78 0.58 0.94 2020-09-08 13:10:07.961914062 INFO 2024-04-09 23:20:30,668Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.378 -0.0022594 -0.0026231 8487 57.14 -5.25 -8.51 2020-09-08 14:07:16.738018990 INFO 2024-04-09 23:20:30,674Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.385 -0.0000262 -0.0000262 208 1.57 -1.91 -3.10 2020-09-08 14:08:51.048533916 INFO 2024-04-09 23:20:30,677Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.385 -0.0006259 -0.0022036 8449 56.89 -4.44 -7.18 2020-09-08 15:05:44.559876919 INFO 2024-04-09 23:20:30,683Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.394 0.0000397 -0.0000322 47 0.53 -7.01 -11.35 2020-09-08 15:06:16.466662884 INFO 2024-04-09 23:20:30,687Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.374 0.0002228 0.0000138 338 2.61 0.61 0.98 2020-09-08 15:08:53.887965918 INFO 2024-04-09 23:20:30,690Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.385 -0.0009257 -0.0012021 3191 21.48 -6.45 -10.37 2020-09-08 15:30:23.158852100 INFO 2024-04-09 23:20:30,694Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.370 0.0001001 0.0000107 241 1.89 0.65 1.05 2020-09-08 15:32:17.094115973 INFO 2024-04-09 23:20:30,698Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.366 0.0003649 0.0000192 3139 21.13 0.11 0.17 2020-09-08 15:53:25.325579882 INFO 2024-04-09 23:20:30,702Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.390 0.0000339 0.0000265 326 2.51 1.23 1.96 2020-09-08 15:55:56.231771946 INFO 2024-04-09 23:20:30,705Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.384 0.0001985 0.0001492 3646 24.73 0.70 1.12 2020-09-08 16:20:40.466109037 INFO 2024-04-09 23:20:30,709Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.348 0.0000031 0.0000312 187 1.40 2.60 4.13 2020-09-08 16:22:04.759438992 INFO 2024-04-09 23:20:30,713Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.384 -0.0001444 -0.0005416 5210 35.08 -1.80 -2.86 2020-09-08 16:57:09.857691050 INFO 2024-04-09 23:20:30,719Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.369 0.0011900 0.0009970 1119 7.92 14.69 23.32 2020-09-08 17:05:05.542876005 INFO 2024-04-09 23:20:30,723Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.375 0.0006078 0.0004125 830 5.65 8.53 13.53 2020-09-08 17:10:44.797804117 INFO 2024-04-09 23:20:30,726Z lrauvNc4ToNetcdf.py nudge_coords():871 43: - - - 90 0.64 - - INFO 2024-04-09 23:20:30,726Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 131997 INFO 2024-04-09 23:20:30,769Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200908T011725/20200908T181123/data.csv INFO 2024-04-09 23:20:30,867Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:30,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:31,406Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:31,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T021725/202009080217_202009081711_2S_scieng.nc INFO 2024-04-09 23:20:31,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009080217_202009081711.nc4 INFO 2024-04-09 23:20:32,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T171125/202009081711_202009082257.nc4 file... INFO 2024-04-09 23:20:32,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009081711_202009082257.nc4 INFO 2024-04-09 23:20:32,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T171125/202009081711_202009082257.nc4 INFO 2024-04-09 23:20:32,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:32,875Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:32,983Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,095Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,199Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,299Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,394Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,483Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,567Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,664Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,749Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,835Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:33,921Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,002Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,086Z lrauvNc4ToNetcdf.py createSeries():299 depth : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,168Z lrauvNc4ToNetcdf.py createSeries():299 time : 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:34,241Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:34,248Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:34,254Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:34,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:34,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:34,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:34,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:34,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:34,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:20:34,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:20:34,330Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:34,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:20:34,333Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:34,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:20:34,341Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 106 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:34,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:34,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:34,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:34,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:34,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:34,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:34,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:34,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:20:34,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:34,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:34,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:34,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:34,445Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:34,500Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:34,556Z lrauvNc4ToNetcdf.py createSeries():299 depth : 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:34,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:34,636Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:35,590Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:35,626Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:36,585Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:36,620Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 105 v_t values found before 2020-09-08 17:11:00 and after 2020-09-08 22:57:00 INFO 2024-04-09 23:20:37,566Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:37,568Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T171125/202009081711_202009082257.nc4 INFO 2024-04-09 23:20:37,726Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 50559 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:37,817Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 45 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T171125/202009081711_202009082257.nc4 INFO 2024-04-09 23:20:37,818Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:37,819Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:37,820Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.381 0.0000430 0.0000183 53 0.35 6.12 9.70 2020-09-08 17:13:22.444623947 INFO 2024-04-09 23:20:37,823Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.398 0.0001473 0.0000948 176 1.27 8.75 13.87 2020-09-08 17:14:38.836421967 INFO 2024-04-09 23:20:37,826Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.362 0.0009155 0.0003930 1120 7.85 5.85 9.28 2020-09-08 17:22:30.060070038 INFO 2024-04-09 23:20:37,829Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.375 0.0012122 0.0003924 1098 7.53 6.09 9.65 2020-09-08 17:30:02.445926905 INFO 2024-04-09 23:20:37,832Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.363 0.0000679 0.0000137 63 0.55 2.93 4.65 2020-09-08 17:30:35.603152990 INFO 2024-04-09 23:20:37,834Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.385 -0.0002182 -0.0001651 351 2.58 -7.47 -11.84 2020-09-08 17:33:11.037889004 INFO 2024-04-09 23:20:37,837Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.380 0.0012270 -0.0003881 3278 22.07 -2.04 -3.26 2020-09-08 17:55:15.363949060 INFO 2024-04-09 23:20:37,840Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.346 0.0000368 0.0000047 38 0.25 2.17 3.48 2020-09-08 17:55:30.742585897 INFO 2024-04-09 23:20:37,843Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.390 0.0001666 0.0000488 1094 7.58 0.75 1.19 2020-09-08 18:03:05.837640047 INFO 2024-04-09 23:20:37,845Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.375 0.0000537 0.0000095 51 0.46 2.40 3.83 2020-09-08 18:03:33.859033108 INFO 2024-04-09 23:20:37,848Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.350 0.0000143 -0.0000942 381 2.79 -3.92 -6.27 2020-09-08 18:06:21.445736885 INFO 2024-04-09 23:20:37,851Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.402 0.0004906 -0.0003876 3488 23.48 -1.90 -3.06 2020-09-08 18:29:50.565911055 INFO 2024-04-09 23:20:37,854Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.371 0.0000072 -0.0000193 38 0.25 -8.94 -14.39 2020-09-08 18:30:05.925909042 INFO 2024-04-09 23:20:37,857Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.373 0.0009327 0.0000078 1138 7.94 0.11 0.18 2020-09-08 18:38:02.443856001 INFO 2024-04-09 23:20:37,860Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.367 0.0012185 0.0001130 1542 10.63 1.22 1.97 2020-09-08 18:48:40.778207064 INFO 2024-04-09 23:20:37,863Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.384 0.0007700 -0.0000690 978 6.70 -1.19 -1.91 2020-09-08 18:55:23.187700033 INFO 2024-04-09 23:20:37,865Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.366 0.0000382 -0.0000022 43 0.41 -0.61 -0.98 2020-09-08 18:55:48.055041075 INFO 2024-04-09 23:20:37,868Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.392 0.0003300 -0.0000180 360 2.63 -0.79 -1.27 2020-09-08 18:58:26.128426075 INFO 2024-04-09 23:20:37,871Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.404 0.0015370 -0.0005726 2387 16.07 -4.09 -6.60 2020-09-08 19:14:30.534518956 INFO 2024-04-09 23:20:37,874Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.371 0.0000287 -0.0000090 58 0.41 -2.51 -4.05 2020-09-08 19:14:55.713902950 INFO 2024-04-09 23:20:37,877Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.368 0.0005870 -0.0001420 310 2.30 -7.08 -11.43 2020-09-08 19:17:14.339956999 INFO 2024-04-09 23:20:37,880Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.344 0.0007381 -0.0008680 3366 22.66 -4.41 -7.10 2020-09-08 19:39:54.265659093 INFO 2024-04-09 23:20:37,883Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.385 0.0000630 0.0000733 133 0.99 8.52 13.71 2020-09-08 19:40:54.092602015 INFO 2024-04-09 23:20:37,886Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.370 0.0001727 -0.0001827 3270 22.01 -0.96 -1.54 2020-09-08 20:02:55.191040039 INFO 2024-04-09 23:20:37,889Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.370 0.0000412 0.0000051 208 1.50 0.39 0.63 2020-09-08 20:04:25.326930046 INFO 2024-04-09 23:20:37,891Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.376 0.0001034 0.0000408 2126 14.31 0.33 0.53 2020-09-08 20:18:44.229037046 INFO 2024-04-09 23:20:37,894Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.381 0.0001246 -0.0000302 1167 8.04 -0.44 -0.70 2020-09-08 20:26:47.058667898 INFO 2024-04-09 23:20:37,897Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.368 0.0000399 0.0000041 166 1.18 0.40 0.64 2020-09-08 20:27:58.250004053 INFO 2024-04-09 23:20:37,900Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.377 0.0000212 -0.0000203 232 1.75 -1.35 -2.15 2020-09-08 20:29:43.544795036 INFO 2024-04-09 23:20:37,902Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.328 0.0000220 -0.0000147 1622 10.92 -0.16 -0.25 2020-09-08 20:40:38.967178106 INFO 2024-04-09 23:20:37,905Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.382 0.0000415 -0.0000261 263 1.89 -1.60 -2.55 2020-09-08 20:42:32.789753914 INFO 2024-04-09 23:20:37,908Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.394 0.0002607 -0.0000239 2978 20.05 -0.14 -0.22 2020-09-08 21:02:35.901829958 INFO 2024-04-09 23:20:37,911Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.383 0.0000031 0.0000075 98 0.72 1.22 1.95 2020-09-08 21:03:19.295134068 INFO 2024-04-09 23:20:37,914Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.377 0.0001866 -0.0000390 2981 20.07 -0.23 -0.36 2020-09-08 21:23:23.654004097 INFO 2024-04-09 23:20:37,917Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.395 0.0000059 -0.0000006 127 0.91 -0.08 -0.13 2020-09-08 21:24:18.772629023 INFO 2024-04-09 23:20:37,919Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.360 0.0002573 -0.0000450 2980 20.06 -0.26 -0.42 2020-09-08 21:44:22.742388964 INFO 2024-04-09 23:20:37,923Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.385 0.0000367 -0.0000133 252 1.81 -0.85 -1.36 2020-09-08 21:46:11.876708031 INFO 2024-04-09 23:20:37,925Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.384 0.0001461 -0.0000130 3212 21.62 -0.07 -0.11 2020-09-08 22:07:49.525851011 INFO 2024-04-09 23:20:37,929Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.367 0.0000205 0.0000110 184 1.30 0.98 1.57 2020-09-08 22:09:08.166729927 INFO 2024-04-09 23:20:37,932Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.363 -0.0000496 -0.0000092 3342 22.50 -0.05 -0.08 2020-09-08 22:31:38.342307091 INFO 2024-04-09 23:20:37,935Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.360 0.0001213 -0.0000283 957 6.59 -0.50 -0.80 2020-09-08 22:38:14.073122025 INFO 2024-04-09 23:20:37,937Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.398 0.0000916 0.0000300 984 6.80 0.51 0.82 2020-09-08 22:45:02.496782064 INFO 2024-04-09 23:20:37,940Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.360 0.0001217 0.0000173 933 6.37 0.32 0.50 2020-09-08 22:51:25.158368111 INFO 2024-04-09 23:20:37,943Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.384 -0.0092744 -0.0000842 878 5.91 -1.66 -2.64 2020-09-08 22:57:19.854834080 INFO 2024-04-09 23:20:37,946Z lrauvNc4ToNetcdf.py nudge_coords():871 45: - - - 54 0.39 - - INFO 2024-04-09 23:20:37,946Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 50558 INFO 2024-04-09 23:20:37,979Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200908T161136/20200908T235744/data.csv INFO 2024-04-09 23:20:38,077Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:38,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:38,452Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:38,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200902_20200908/20200908T171125/202009081711_202009082257_2S_scieng.nc INFO 2024-04-09 23:20:38,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009081711_202009082257.nc4 INFO 2024-04-09 23:20:40,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200922T233125/202009222331_202009231601.nc4 file... INFO 2024-04-09 23:20:40,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009222331_202009231601.nc4 INFO 2024-04-09 23:20:40,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200922T233125/202009222331_202009231601.nc4 INFO 2024-04-09 23:20:40,800Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:40,968Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,159Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,353Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,510Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,642Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,775Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:41,928Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,068Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,210Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,352Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,506Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,708Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,848Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:42,982Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,116Z lrauvNc4ToNetcdf.py createSeries():299 time : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:43,235Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:43,242Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:43,248Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:43,256Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 76 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:43,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:43,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:43,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:43,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:43,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:43,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:43,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:43,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:43,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:43,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:43,635Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:43,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:43,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:43,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:43,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:44,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:44,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:44,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:44,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:20:44,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:20:44,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:44,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:44,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:44,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:44,364Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:44,371Z lrauvNc4ToNetcdf.py createSeries():299 fix_residual_percent_distance_traveled: 1 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,375Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:44,394Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:44,523Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:44,651Z lrauvNc4ToNetcdf.py createSeries():299 depth : 116 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:44,812Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 113 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:44,937Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:44,989Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 113 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:45,117Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:45,168Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 113 v_t values found before 2020-09-22 23:31:00 and after 2020-09-23 16:01:00 INFO 2024-04-09 23:20:45,298Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:45,299Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200922T233125/202009222331_202009231601.nc4 INFO 2024-04-09 23:20:45,586Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 146378 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:45,692Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 48 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200922T233125/202009222331_202009231601.nc4 INFO 2024-04-09 23:20:45,692Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:45,695Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 166 1.11 - - - INFO 2024-04-09 23:20:45,697Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.385 0.0000179 0.0000016 213 1.43 0.13 0.21 2020-09-22 23:33:58.820998907 INFO 2024-04-09 23:20:45,700Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.362 -0.0001765 -0.0000917 3150 21.21 -0.50 -0.80 2020-09-22 23:55:11.546097994 INFO 2024-04-09 23:20:45,703Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.373 -0.0003712 0.0000837 567 3.96 2.45 3.92 2020-09-22 23:59:09.478846073 INFO 2024-04-09 23:20:45,706Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.371 -0.0007333 0.0000004 3914 26.35 0.00 0.00 2020-09-23 00:25:30.862070084 INFO 2024-04-09 23:20:45,710Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.375 0.0001132 -0.0000266 75 0.50 -6.13 -9.87 2020-09-23 00:26:01.234839916 INFO 2024-04-09 23:20:45,714Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.383 0.0000975 -0.0001559 5554 37.40 -0.48 -0.77 2020-09-23 01:03:25.845932961 INFO 2024-04-09 23:20:45,719Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.362 -0.0001743 -0.0000142 327 2.37 -0.69 -1.11 2020-09-23 01:05:48.327987909 INFO 2024-04-09 23:20:45,722Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.341 -0.0000253 -0.0000272 41 0.27 -11.60 -18.67 2020-09-23 01:06:04.916801929 INFO 2024-04-09 23:20:45,725Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.368 0.0000773 0.0001371 818 5.50 2.87 4.62 2020-09-23 01:11:35.471684933 INFO 2024-04-09 23:20:45,729Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.387 0.0003104 0.0000755 818 5.50 1.58 2.54 2020-09-23 01:17:05.965534925 INFO 2024-04-09 23:20:45,732Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.374 0.0002154 0.0004236 635 4.27 11.42 18.39 2020-09-23 01:21:22.522857904 INFO 2024-04-09 23:20:45,735Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.375 0.0000180 0.0000633 183 1.23 5.94 9.56 2020-09-23 01:22:36.518809080 INFO 2024-04-09 23:20:45,739Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.427 0.0026538 0.0010193 5262 35.43 3.29 5.33 2020-09-23 01:58:02.958976030 INFO 2024-04-09 23:20:45,743Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.371 0.0000200 0.0000127 61 0.41 3.50 5.66 2020-09-23 01:58:28.337867022 INFO 2024-04-09 23:20:45,747Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.364 0.0041005 0.0009623 4975 33.49 3.27 5.32 2020-09-23 02:31:58.371884108 INFO 2024-04-09 23:20:45,751Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.383 0.0000707 0.0002776 258 1.90 16.61 27.04 2020-09-23 02:33:52.933742046 INFO 2024-04-09 23:20:45,755Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.366 0.0046079 0.0000052 4959 33.39 0.02 0.03 2020-09-23 03:07:16.554280996 INFO 2024-04-09 23:20:45,759Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.372 0.0018068 0.0000532 431 3.10 1.95 3.18 2020-09-23 03:10:22.761872053 INFO 2024-04-09 23:20:45,763Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.373 0.0053488 0.0009383 4710 31.71 3.33 5.48 2020-09-23 03:42:05.738878965 INFO 2024-04-09 23:20:45,767Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.355 -0.0000832 -0.0001233 133 1.04 -13.38 -22.02 2020-09-23 03:43:08.438235998 INFO 2024-04-09 23:20:45,771Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.361 0.0012531 0.0001588 5770 38.85 0.46 0.76 2020-09-23 04:21:59.741909981 INFO 2024-04-09 23:20:45,776Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.337 -0.0000732 -0.0000285 188 1.29 -2.47 -4.09 2020-09-23 04:23:17.561069965 INFO 2024-04-09 23:20:45,779Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.371 -0.0000024 0.0000052 9 0.05 10.70 17.72 2020-09-23 04:23:21.154979944 INFO 2024-04-09 23:20:45,782Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.383 -0.0003500 0.0008717 824 5.94 16.42 27.20 2020-09-23 04:29:17.906672001 INFO 2024-04-09 23:20:45,786Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.369 0.0029723 0.0015569 7598 51.16 3.38 5.64 2020-09-23 05:20:27.726875067 INFO 2024-04-09 23:20:45,790Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.395 -0.0003442 -0.0001993 372 2.77 -7.99 -13.36 2020-09-23 05:23:14.021358013 INFO 2024-04-09 23:20:45,793Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.369 0.0023529 0.0006740 7836 52.76 1.40 2.37 2020-09-23 06:15:59.990858078 INFO 2024-04-09 23:20:45,798Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.392 -0.0004268 -0.0001390 334 2.47 -6.17 -10.41 2020-09-23 06:18:28.822851896 INFO 2024-04-09 23:20:45,801Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.377 0.0001957 0.0009994 7926 53.37 2.04 3.47 2020-09-23 07:11:51.138669968 INFO 2024-04-09 23:20:45,806Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.379 -0.0002488 -0.0000035 183 1.43 -0.27 -0.45 2020-09-23 07:13:17.088613033 INFO 2024-04-09 23:20:45,809Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.375 0.0035310 0.0017147 7860 52.92 3.50 6.00 2020-09-23 08:06:12.801980019 INFO 2024-04-09 23:20:45,814Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.366 -0.0003173 0.0000263 306 2.28 1.25 2.14 2020-09-23 08:08:30.268799067 INFO 2024-04-09 23:20:45,817Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.381 0.0042693 -0.0006084 7954 53.55 -1.22 -2.10 2020-09-23 09:02:03.885601044 INFO 2024-04-09 23:20:45,822Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.368 -0.0001583 -0.0000058 398 2.90 -0.22 -0.37 2020-09-23 09:04:58.372082949 INFO 2024-04-09 23:20:45,825Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.392 0.0077430 -0.0005303 8097 54.52 -1.03 -1.80 2020-09-23 09:59:29.849446058 INFO 2024-04-09 23:20:45,830Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.369 -0.0001648 -0.0000476 4359 30.03 -0.17 -0.29 2020-09-23 10:29:32.028856993 INFO 2024-04-09 23:20:45,835Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.373 0.0064359 0.0004804 8039 54.13 0.93 1.64 2020-09-23 11:23:40.073797941 INFO 2024-04-09 23:20:45,840Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.359 0.0000098 0.0003413 701 5.25 6.82 12.04 2020-09-23 11:28:55.653002977 INFO 2024-04-09 23:20:45,844Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.358 0.0069748 0.0025475 7735 52.08 5.11 9.06 2020-09-23 12:21:00.864248991 INFO 2024-04-09 23:20:45,848Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.348 -0.0000342 0.0001735 541 3.95 4.59 8.14 2020-09-23 12:24:58.335445881 INFO 2024-04-09 23:20:45,852Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.365 0.0086829 0.0032965 7990 53.80 6.37 11.35 2020-09-23 13:18:46.518866061 INFO 2024-04-09 23:20:45,857Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.384 -0.0000255 0.0003218 545 3.92 8.54 15.21 2020-09-23 13:22:42.156331062 INFO 2024-04-09 23:20:45,861Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.392 0.0085026 0.0054896 7545 50.80 11.20 20.02 2020-09-23 14:13:30.560738087 INFO 2024-04-09 23:20:45,866Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.402 -0.0001060 0.0002850 287 2.13 13.86 24.77 2020-09-23 14:15:38.926567078 INFO 2024-04-09 23:20:45,869Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.366 0.0064531 0.0081348 7732 52.06 16.10 28.96 2020-09-23 15:07:42.899986029 INFO 2024-04-09 23:20:45,874Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.377 0.0000262 0.0001635 204 1.57 10.74 19.31 2020-09-23 15:09:17.413727999 INFO 2024-04-09 23:20:45,878Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.374 0.0055642 0.0073876 7754 52.21 14.57 26.22 2020-09-23 16:01:30.221728086 INFO 2024-04-09 23:20:45,882Z lrauvNc4ToNetcdf.py nudge_coords():871 48: - - - 40 0.29 - - INFO 2024-04-09 23:20:45,883Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 146377 INFO 2024-04-09 23:20:45,914Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200922T223125/20200923T170148/data.csv INFO 2024-04-09 23:20:46,021Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:20:46,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:20:46,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:20:46,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:46,659Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:47,067Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200922T233125/202009222331_202009231601_2S_scieng.nc INFO 2024-04-09 23:20:47,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009222331_202009231601.nc4 INFO 2024-04-09 23:20:47,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T160148/202009231601_202009231712.nc4 file... INFO 2024-04-09 23:20:47,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009231601_202009231712.nc4 INFO 2024-04-09 23:20:47,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T160148/202009231601_202009231712.nc4 INFO 2024-04-09 23:20:47,875Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:47,944Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,012Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,079Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,145Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,208Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,277Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,341Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,404Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,466Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,530Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,600Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,663Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,725Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,788Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,852Z lrauvNc4ToNetcdf.py createSeries():299 time : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:48,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:48,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:48,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:48,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:48,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:48,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:48,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:48,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:48,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:48,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:48,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:48,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:48,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:48,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:48,986Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:48,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:49,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:20:49,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:20:49,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:20:49,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:20:49,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:20:49,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:20:49,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:20:49,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:20:49,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:49,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:20:49,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:49,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:49,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:49,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:49,112Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:49,129Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:49,146Z lrauvNc4ToNetcdf.py createSeries():299 depth : 16 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,160Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:49,194Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 13 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,244Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:49,272Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 13 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,324Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:49,351Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 13 v_t values found before 2020-09-23 16:01:00 and after 2020-09-23 17:12:00 INFO 2024-04-09 23:20:49,399Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:49,400Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T160148/202009231601_202009231712.nc4 INFO 2024-04-09 23:20:49,519Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10128 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:49,620Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T160148/202009231601_202009231712.nc4 INFO 2024-04-09 23:20:49,620Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:49,622Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 8327 56.07 - - - INFO 2024-04-09 23:20:49,623Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 0.0003315 0.0001047 285 2.00 5.34 9.70 2020-09-23 17:01:16.405556917 INFO 2024-04-09 23:20:49,626Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.372 0.0015538 0.0004527 1469 10.48 4.41 8.00 2020-09-23 17:11:45.545825005 INFO 2024-04-09 23:20:49,629Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 46 0.33 - - INFO 2024-04-09 23:20:49,630Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10127 INFO 2024-04-09 23:20:49,656Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200923T150148/20200923T181206/data.csv INFO 2024-04-09 23:20:49,764Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:49,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:50,217Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:50,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T160148/202009231601_202009231712_2S_scieng.nc INFO 2024-04-09 23:20:50,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009231601_202009231712.nc4 INFO 2024-04-09 23:20:51,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T171207/202009231712_202009231908.nc4 file... INFO 2024-04-09 23:20:51,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009231712_202009231908.nc4 INFO 2024-04-09 23:20:51,668Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T171207/202009231712_202009231908.nc4 INFO 2024-04-09 23:20:51,697Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:51,767Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:51,836Z lrauvNc4ToNetcdf.py createSeries():299 depth : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:51,906Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:51,973Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,034Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,097Z lrauvNc4ToNetcdf.py createSeries():299 depth : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,160Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,229Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,297Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,372Z lrauvNc4ToNetcdf.py createSeries():299 depth : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,447Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,517Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,589Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,674Z lrauvNc4ToNetcdf.py createSeries():299 depth : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,742Z lrauvNc4ToNetcdf.py createSeries():299 time : 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:52,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:52,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:52,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:52,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:52,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:52,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:52,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:52,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:52,855Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:52,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:52,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:52,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:52,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:52,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:52,886Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 59 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:52,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:52,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:52,921Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:52,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:20:52,928Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:52,949Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,967Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:52,970Z lrauvNc4ToNetcdf.py createSeries():299 depth : 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:52,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:53,018Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:53,581Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:53,609Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:54,156Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:54,182Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 58 v_t values found before 2020-09-23 17:12:00 and after 2020-09-23 19:08:00 INFO 2024-04-09 23:20:54,749Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:54,750Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T171207/202009231712_202009231908.nc4 INFO 2024-04-09 23:20:54,880Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 14873 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:54,975Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T171207/202009231712_202009231908.nc4 INFO 2024-04-09 23:20:54,976Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:54,976Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:54,977Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 0.0003482 0.0000993 299 2.24 4.54 8.23 2020-09-23 17:30:14.666619062 INFO 2024-04-09 23:20:54,980Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 14573 98.13 - - INFO 2024-04-09 23:20:54,981Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 14872 INFO 2024-04-09 23:20:55,002Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200923T161218/20200923T200823/data.csv INFO 2024-04-09 23:20:55,096Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:20:55,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:55,505Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:55,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T171207/202009231712_202009231908_2S_scieng.nc INFO 2024-04-09 23:20:55,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009231712_202009231908.nc4 INFO 2024-04-09 23:20:56,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T190823/202009231908_202009232036.nc4 file... INFO 2024-04-09 23:20:56,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009231908_202009232036.nc4 INFO 2024-04-09 23:20:56,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T190823/202009231908_202009232036.nc4 INFO 2024-04-09 23:20:56,920Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:56,999Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,075Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,144Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,211Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,278Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,348Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,415Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,482Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,554Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,633Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,704Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,793Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,868Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:57,933Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,001Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:20:58,053Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:20:58,059Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,063Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:20:58,064Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:20:58,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:20:58,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:20:58,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:20:58,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:20:58,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:20:58,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:20:58,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:20:58,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:20:58,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:20:58,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:20:58,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:20:58,143Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 137 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:20:58,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:20:58,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:20:58,175Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:20:58,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:58,186Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:58,204Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:58,223Z lrauvNc4ToNetcdf.py createSeries():299 depth : 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:20:58,267Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,316Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:58,341Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,393Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:58,422Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 136 v_t values found before 2020-09-23 19:08:00 and after 2020-09-23 20:36:00 INFO 2024-04-09 23:20:58,477Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:20:58,478Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T190823/202009231908_202009232036.nc4 INFO 2024-04-09 23:20:58,597Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 13042 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:20:58,692Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 7 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T190823/202009231908_202009232036.nc4 INFO 2024-04-09 23:20:58,692Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:20:58,693Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:20:58,694Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.390 0.0014113 -0.0013695 895 6.02 -23.22 -42.13 2020-09-23 19:14:26.154463053 INFO 2024-04-09 23:20:58,696Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.374 0.0008659 -0.0007952 818 5.50 -14.74 -26.78 2020-09-23 19:19:56.658685923 INFO 2024-04-09 23:20:58,699Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.383 0.0081755 0.0026881 8481 57.10 4.80 8.72 2020-09-23 20:17:03.174573898 INFO 2024-04-09 23:20:58,703Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.362 0.0002686 -0.0003854 366 2.80 -14.02 -25.48 2020-09-23 20:19:51.752110004 INFO 2024-04-09 23:20:58,706Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0011323 -0.0005266 1248 8.60 -6.24 -11.35 2020-09-23 20:28:27.925941944 INFO 2024-04-09 23:20:58,708Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.327 0.0013372 -0.0007435 1197 8.19 -9.24 -16.81 2020-09-23 20:36:40.001780033 INFO 2024-04-09 23:20:58,711Z lrauvNc4ToNetcdf.py nudge_coords():871 7: - - - 36 0.26 - - INFO 2024-04-09 23:20:58,711Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 13041 INFO 2024-04-09 23:20:58,736Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200923T180823/20200923T213656/data.csv INFO 2024-04-09 23:20:58,833Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:20:58,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:20:58,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:20:58,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:20:59,298Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:20:59,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T190823/202009231908_202009232036_2S_scieng.nc INFO 2024-04-09 23:20:59,741Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009231908_202009232036.nc4 INFO 2024-04-09 23:21:00,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T203657/202009232036_202009232154.nc4 file... INFO 2024-04-09 23:21:00,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009232036_202009232154.nc4 INFO 2024-04-09 23:21:00,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T203657/202009232036_202009232154.nc4 INFO 2024-04-09 23:21:00,668Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:00,734Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:00,805Z lrauvNc4ToNetcdf.py createSeries():299 depth : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:00,874Z lrauvNc4ToNetcdf.py createSeries():299 time : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:00,957Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,029Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,119Z lrauvNc4ToNetcdf.py createSeries():299 depth : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,221Z lrauvNc4ToNetcdf.py createSeries():299 time : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,302Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,366Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,429Z lrauvNc4ToNetcdf.py createSeries():299 depth : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,492Z lrauvNc4ToNetcdf.py createSeries():299 time : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,554Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,617Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,682Z lrauvNc4ToNetcdf.py createSeries():299 depth : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,745Z lrauvNc4ToNetcdf.py createSeries():299 time : 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:01,795Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:01,800Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:01,805Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:01,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:01,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:01,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:01,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:01,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:01,849Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:01,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:01,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:01,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:01,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:01,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:01,877Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 55 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:01,899Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:01,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:01,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:01,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:01,917Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:01,932Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,944Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:01,947Z lrauvNc4ToNetcdf.py createSeries():299 depth : 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:01,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:01,988Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:02,039Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:02,064Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:02,114Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:02,136Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 54 v_t values found before 2020-09-23 20:36:00 and after 2020-09-23 21:54:00 INFO 2024-04-09 23:21:02,183Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:02,184Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T203657/202009232036_202009232154.nc4 INFO 2024-04-09 23:21:02,295Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11067 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:02,392Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T203657/202009232036_202009232154.nc4 INFO 2024-04-09 23:21:02,392Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:02,393Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:21:02,394Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.370 0.0004707 -0.0002930 395 2.94 -10.14 -18.46 2020-09-23 20:42:30.190751076 INFO 2024-04-09 23:21:02,396Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.368 0.0001830 0.0004205 10627 71.55 0.60 1.09 2020-09-23 21:54:03.645755053 INFO 2024-04-09 23:21:02,399Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 44 0.32 - - INFO 2024-04-09 23:21:02,399Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11066 INFO 2024-04-09 23:21:02,420Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200923T193657/20200923T225423/data.csv INFO 2024-04-09 23:21:02,517Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:02,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:03,043Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:03,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T203657/202009232036_202009232154_2S_scieng.nc INFO 2024-04-09 23:21:03,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009232036_202009232154.nc4 INFO 2024-04-09 23:21:04,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T215424/202009232154_202009240454.nc4 file... INFO 2024-04-09 23:21:04,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009232154_202009240454.nc4 INFO 2024-04-09 23:21:07,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T215424/202009232154_202009240454.nc4 INFO 2024-04-09 23:21:07,426Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:07,540Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:07,651Z lrauvNc4ToNetcdf.py createSeries():299 depth : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:07,761Z lrauvNc4ToNetcdf.py createSeries():299 time : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:07,864Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:07,961Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,058Z lrauvNc4ToNetcdf.py createSeries():299 depth : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,155Z lrauvNc4ToNetcdf.py createSeries():299 time : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,252Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,345Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,438Z lrauvNc4ToNetcdf.py createSeries():299 depth : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,532Z lrauvNc4ToNetcdf.py createSeries():299 time : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,629Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,721Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,816Z lrauvNc4ToNetcdf.py createSeries():299 depth : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,916Z lrauvNc4ToNetcdf.py createSeries():299 time : 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:08,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:09,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:09,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:09,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:09,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:09,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:09,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:09,061Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:09,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:09,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:09,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:09,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:09,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:09,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:09,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:09,208Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 9 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:09,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:09,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:09,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:09,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:09,294Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:09,361Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:09,426Z lrauvNc4ToNetcdf.py createSeries():299 depth : 10 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:09,521Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 8 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,599Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:09,640Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 8 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,721Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:09,763Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 8 v_t values found before 2020-09-23 21:54:00 and after 2020-09-24 04:54:00 INFO 2024-04-09 23:21:09,847Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:09,848Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T215424/202009232154_202009240454.nc4 INFO 2024-04-09 23:21:10,047Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 60751 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:10,167Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 22 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T215424/202009232154_202009240454.nc4 INFO 2024-04-09 23:21:10,168Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:10,170Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 942 6.36 - - - INFO 2024-04-09 23:21:10,171Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.377 0.0009518 -0.0008572 983 6.73 -13.00 -23.62 2020-09-23 22:13:42.962225914 INFO 2024-04-09 23:21:10,174Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.385 0.0007925 -0.0006618 830 5.64 -11.96 -21.76 2020-09-23 22:19:21.593820095 INFO 2024-04-09 23:21:10,178Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.405 0.0099887 0.0014726 19829 134.52 1.13 2.03 2020-09-24 00:33:53.105720997 INFO 2024-04-09 23:21:10,185Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.380 0.0011356 -0.0006541 998 7.49 -8.96 -16.19 2020-09-24 00:41:22.754686117 INFO 2024-04-09 23:21:10,188Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.368 0.0059701 0.0030837 7519 50.62 6.25 11.29 2020-09-24 01:32:00.589919090 INFO 2024-04-09 23:21:10,193Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.372 0.0000638 -0.0001927 303 2.21 -8.96 -16.19 2020-09-24 01:34:13.301842928 INFO 2024-04-09 23:21:10,197Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.375 0.0027662 0.0034146 7843 52.81 6.60 11.98 2020-09-24 02:27:02.077912092 INFO 2024-04-09 23:21:10,202Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.361 -0.0002421 -0.0014192 1303 9.71 -14.90 -27.08 2020-09-24 02:36:45.117903948 INFO 2024-04-09 23:21:10,205Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.379 0.0001193 -0.0009797 1532 10.59 -9.41 -17.14 2020-09-24 02:47:20.966664076 INFO 2024-04-09 23:21:10,208Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.390 -0.0000562 -0.0002880 1032 7.06 -4.15 -7.56 2020-09-24 02:54:24.709533930 INFO 2024-04-09 23:21:10,211Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.393 -0.0000130 -0.0003040 494 3.51 -8.81 -16.06 2020-09-24 02:57:55.586612940 INFO 2024-04-09 23:21:10,214Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.369 0.0000070 -0.0000993 228 1.67 -6.05 -11.02 2020-09-24 02:59:36.188944101 INFO 2024-04-09 23:21:10,217Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.381 0.0000125 -0.0002073 133 0.89 -23.70 -43.20 2020-09-24 03:00:29.913635015 INFO 2024-04-09 23:21:10,219Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.387 0.0000518 0.0000138 122 0.87 1.61 2.94 2020-09-24 03:01:22.697554111 INFO 2024-04-09 23:21:10,222Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.373 -0.0006949 -0.0001616 3361 22.62 -0.73 -1.32 2020-09-24 03:24:00.556855917 INFO 2024-04-09 23:21:10,226Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.376 -0.0001216 -0.0001477 235 1.61 -9.36 -17.04 2020-09-24 03:25:37.323421001 INFO 2024-04-09 23:21:10,229Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.363 -0.0000353 -0.0000850 220 1.60 -5.40 -9.84 2020-09-24 03:27:13.816956043 INFO 2024-04-09 23:21:10,232Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.371 -0.0000332 -0.0000905 174 1.31 -7.05 -12.84 2020-09-24 03:28:32.578864098 INFO 2024-04-09 23:21:10,234Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.360 -0.0000037 -0.0000005 12 0.07 -0.68 -1.24 2020-09-24 03:28:37.435286045 INFO 2024-04-09 23:21:10,237Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.355 -0.0000458 -0.0000663 132 0.94 -7.18 -13.09 2020-09-24 03:29:34.155013084 INFO 2024-04-09 23:21:10,241Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.374 0.0069929 -0.0024003 7418 49.94 -4.91 -8.91 2020-09-24 04:19:31.130753039 INFO 2024-04-09 23:21:10,246Z lrauvNc4ToNetcdf.py nudge_coords():871 22: - - - 5107 34.53 - - INFO 2024-04-09 23:21:10,246Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 60750 INFO 2024-04-09 23:21:10,273Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200923T205424/20200924T055403/data.csv INFO 2024-04-09 23:21:10,381Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:10,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:10,654Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:10,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200923T215424/202009232154_202009240454_2S_scieng.nc INFO 2024-04-09 23:21:10,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009232154_202009240454.nc4 INFO 2024-04-09 23:21:11,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T045522/202009240455_202009241628.nc4 file... INFO 2024-04-09 23:21:11,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009240455_202009241628.nc4 INFO 2024-04-09 23:21:12,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T045522/202009240455_202009241628.nc4 INFO 2024-04-09 23:21:12,435Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:12,570Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:12,720Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:12,871Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,012Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,132Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,252Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,423Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,565Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,684Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,801Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:13,920Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,038Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,157Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,275Z lrauvNc4ToNetcdf.py createSeries():299 depth : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,395Z lrauvNc4ToNetcdf.py createSeries():299 time : 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:14,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:14,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:14,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:14,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:14,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:14,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:14,551Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 38 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:14,650Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:14,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:14,676Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:14,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:14,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:14,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:14,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:14,714Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 83 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:14,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:14,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:14,803Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:14,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:14,827Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:14,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:14,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:15,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:15,027Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:15,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:15,157Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:16,110Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:16,164Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:17,140Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:17,190Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 82 v_t values found before 2020-09-24 04:55:00 and after 2020-09-24 16:28:00 INFO 2024-04-09 23:21:18,140Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:18,141Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T045522/202009240455_202009241628.nc4 INFO 2024-04-09 23:21:18,380Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 101822 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:18,504Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 31 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T045522/202009240455_202009241628.nc4 INFO 2024-04-09 23:21:18,504Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:18,506Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:21:18,507Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.379 -0.0009177 -0.0012466 1260 8.79 -14.46 -26.27 2020-09-24 05:09:00.806370974 INFO 2024-04-09 23:21:18,510Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.388 -0.0004895 -0.0006133 858 5.83 -10.73 -19.50 2020-09-24 05:14:50.822355032 INFO 2024-04-09 23:21:18,513Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.389 0.0000337 -0.0004148 937 6.62 -6.38 -11.62 2020-09-24 05:21:28.262343884 INFO 2024-04-09 23:21:18,516Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.339 -0.0000102 -0.0002398 316 2.32 -10.51 -19.14 2020-09-24 05:23:47.988631010 INFO 2024-04-09 23:21:18,519Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.370 0.0000194 -0.0004005 1193 8.03 -5.09 -9.25 2020-09-24 05:31:49.949341059 INFO 2024-04-09 23:21:18,522Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.375 0.0001010 -0.0002292 190 1.42 -16.43 -29.83 2020-09-24 05:33:15.747572899 INFO 2024-04-09 23:21:18,525Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.374 0.0000280 0.0054232 16982 114.35 4.85 8.79 2020-09-24 07:27:36.879568100 INFO 2024-04-09 23:21:18,531Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.372 -0.0001757 -0.0003302 256 1.94 -17.39 -31.56 2020-09-24 07:29:33.586740017 INFO 2024-04-09 23:21:18,535Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.362 -0.0004692 -0.0012590 978 7.26 -17.67 -32.12 2020-09-24 07:36:49.690927029 INFO 2024-04-09 23:21:18,539Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.371 -0.0062425 0.0001782 7062 47.54 0.38 0.69 2020-09-24 08:24:22.730871916 INFO 2024-04-09 23:21:18,544Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.374 -0.0001921 -0.0000280 155 1.13 -2.53 -4.61 2020-09-24 08:25:30.615581989 INFO 2024-04-09 23:21:18,548Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.405 -0.0042313 0.0008522 7732 52.06 1.66 3.03 2020-09-24 09:17:34.338429928 INFO 2024-04-09 23:21:18,553Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.379 -0.0001753 -0.0001610 187 1.37 -11.94 -21.79 2020-09-24 09:18:56.892419100 INFO 2024-04-09 23:21:18,557Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.384 -0.0034242 0.0004318 7141 48.08 0.91 1.66 2020-09-24 10:07:01.858447075 INFO 2024-04-09 23:21:18,561Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.394 -0.0002385 -0.0001245 201 1.50 -8.41 -15.40 2020-09-24 10:08:32.107477903 INFO 2024-04-09 23:21:18,564Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.397 -0.0030984 -0.0011099 7284 49.04 -2.28 -4.19 2020-09-24 10:57:34.835589886 INFO 2024-04-09 23:21:18,569Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.390 -0.0001515 0.0000118 185 1.24 0.96 1.77 2020-09-24 10:58:49.608876944 INFO 2024-04-09 23:21:18,573Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.388 -0.0074115 -0.0008360 7258 48.86 -1.72 -3.17 2020-09-24 11:47:41.823292971 INFO 2024-04-09 23:21:18,578Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.376 0.0000240 0.0001500 351 2.53 5.97 11.00 2020-09-24 11:50:13.765512943 INFO 2024-04-09 23:21:18,582Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.381 -0.0032747 -0.0002240 8254 55.57 -0.40 -0.75 2020-09-24 12:45:48.383495092 INFO 2024-04-09 23:21:18,589Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.401 0.0002572 0.0012860 7469 50.29 2.57 4.74 2020-09-24 13:36:05.887667894 INFO 2024-04-09 23:21:18,594Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.357 0.0000318 0.0000498 87 0.58 8.63 15.92 2020-09-24 13:36:41.115425110 INFO 2024-04-09 23:21:18,597Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.374 0.0002249 0.0005102 718 4.83 10.61 19.58 2020-09-24 13:41:31.226461887 INFO 2024-04-09 23:21:18,601Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.373 0.0000057 0.0000800 74 0.49 16.35 30.16 2020-09-24 13:42:01.126534939 INFO 2024-04-09 23:21:18,604Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.367 -0.0008451 0.0008514 7714 51.94 1.64 3.04 2020-09-24 14:33:57.667810917 INFO 2024-04-09 23:21:18,610Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.378 -0.0000172 0.0000171 75 0.50 3.43 6.36 2020-09-24 14:34:27.966444969 INFO 2024-04-09 23:21:18,613Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.375 -0.0000082 -0.0002674 7621 51.31 -0.52 -0.97 2020-09-24 15:25:46.855649948 INFO 2024-04-09 23:21:18,618Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.398 0.0000263 -0.0000157 80 0.62 -2.54 -4.72 2020-09-24 15:26:24.295373917 INFO 2024-04-09 23:21:18,622Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.378 0.0000839 0.0000175 940 6.32 0.28 0.51 2020-09-24 15:32:44.070889950 INFO 2024-04-09 23:21:18,625Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.357 0.0000215 -0.0000231 450 3.20 -0.72 -1.34 2020-09-24 15:35:56.204123974 INFO 2024-04-09 23:21:18,629Z lrauvNc4ToNetcdf.py nudge_coords():871 31: - - - 7813 52.60 - - INFO 2024-04-09 23:21:18,629Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 101821 INFO 2024-04-09 23:21:18,661Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T035534/20200924T172833/data.csv INFO 2024-04-09 23:21:18,760Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:18,771Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:19,037Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:19,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T045522/202009240455_202009241628_2S_scieng.nc INFO 2024-04-09 23:21:19,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009240455_202009241628.nc4 INFO 2024-04-09 23:21:19,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T162833/202009241628_202009241640.nc4 file... INFO 2024-04-09 23:21:19,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009241628_202009241640.nc4 INFO 2024-04-09 23:21:19,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T162833/202009241628_202009241640.nc4 INFO 2024-04-09 23:21:19,833Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:19,896Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:19,959Z lrauvNc4ToNetcdf.py createSeries():299 depth : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,028Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,095Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,161Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,228Z lrauvNc4ToNetcdf.py createSeries():299 depth : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,297Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,363Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,430Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,497Z lrauvNc4ToNetcdf.py createSeries():299 depth : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,561Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,626Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,691Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,756Z lrauvNc4ToNetcdf.py createSeries():299 depth : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,821Z lrauvNc4ToNetcdf.py createSeries():299 time : 62 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:20,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:20,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:20,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:20,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping INFO 2024-04-09 23:21:20,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:21:20,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:21:20,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:20,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping INFO 2024-04-09 23:21:20,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:21:20,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:21:20,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:21:20,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:21:20,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:21:20,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:21:20,899Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 62 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,904Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:20,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:21:20,915Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:21:20,916Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:20,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:20,923Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:20,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:20,936Z lrauvNc4ToNetcdf.py createSeries():299 depth : 63 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:20,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:20,978Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 61 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:21,033Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:21,066Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 61 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:21,134Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:21,168Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 61 v_t values found before 2020-09-24 16:28:00 and after 2020-09-24 16:40:00 INFO 2024-04-09 23:21:21,228Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:21,228Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T162833/202009241628_202009241640.nc4 INFO 2024-04-09 23:21:21,336Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1754 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:21,439Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T162833/202009241628_202009241640.nc4 INFO 2024-04-09 23:21:21,439Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:21,441Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 3 0.01 - - - INFO 2024-04-09 23:21:21,442Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.369 -0.0000007 0.0000103 38 0.25 4.13 7.69 2020-09-24 16:28:49.667563915 INFO 2024-04-09 23:21:21,444Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.378 0.0000414 0.0000213 908 6.16 0.34 0.64 2020-09-24 16:34:59.863373995 INFO 2024-04-09 23:21:21,446Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 804 5.41 - - INFO 2024-04-09 23:21:21,446Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1753 INFO 2024-04-09 23:21:21,468Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T152833/20200924T174025/data.csv INFO 2024-04-09 23:21:21,562Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:21,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'PAR', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:21,743Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:21,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T162833/202009241628_202009241640_2S_scieng.nc INFO 2024-04-09 23:21:21,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009241628_202009241640.nc4 INFO 2024-04-09 23:21:22,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T164026/202009241640_202009241823.nc4 file... INFO 2024-04-09 23:21:22,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009241640_202009241823.nc4 INFO 2024-04-09 23:21:22,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T164026/202009241640_202009241823.nc4 INFO 2024-04-09 23:21:22,948Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,018Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,088Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,157Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,224Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,289Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,355Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,421Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,488Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,562Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,630Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,696Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,762Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,827Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,892Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:23,959Z lrauvNc4ToNetcdf.py createSeries():299 time : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:24,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:24,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:24,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:24,024Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 69 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:24,030Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 25 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:24,039Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 15 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:24,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:24,051Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 36 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:24,070Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 45 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:24,080Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 45 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,087Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:24,088Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 9 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:24,094Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 9 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:24,100Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 9 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:24,105Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 9 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:24,113Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:24,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:24,150Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:24,151Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:24,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:21:24,159Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:24,182Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:24,204Z lrauvNc4ToNetcdf.py createSeries():299 depth : 115 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:24,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:24,255Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 114 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:25,318Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:25,351Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 114 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:26,428Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:26,455Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 114 v_t values found before 2020-09-24 16:40:00 and after 2020-09-24 18:23:00 INFO 2024-04-09 23:21:27,545Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:27,546Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T164026/202009241640_202009241823.nc4 INFO 2024-04-09 23:21:27,716Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 14681 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:27,818Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T164026/202009241640_202009241823.nc4 INFO 2024-04-09 23:21:27,818Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:27,819Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:21:27,820Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 -0.0000340 -0.0000224 98 0.71 -3.14 -5.84 2020-09-24 16:44:51.375772953 INFO 2024-04-09 23:21:27,822Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.386 0.0001405 0.0000660 1219 8.46 0.78 1.45 2020-09-24 16:53:19.430272102 INFO 2024-04-09 23:21:27,825Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.400 0.0000776 0.0000533 697 4.95 1.08 2.00 2020-09-24 16:58:16.541517019 INFO 2024-04-09 23:21:27,827Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.399 0.0000482 -0.0000023 257 1.92 -0.12 -0.22 2020-09-24 17:00:12.415021896 INFO 2024-04-09 23:21:27,830Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 12409 83.55 - - INFO 2024-04-09 23:21:27,830Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 14680 INFO 2024-04-09 23:21:27,865Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T154037/20200924T192346/data.csv INFO 2024-04-09 23:21:27,963Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:27,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:28,229Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:28,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T164026/202009241640_202009241823_2S_scieng.nc INFO 2024-04-09 23:21:28,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009241640_202009241823.nc4 INFO 2024-04-09 23:21:29,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/202009241823_202009241924.nc4 file... INFO 2024-04-09 23:21:29,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009241823_202009241924.nc4 INFO 2024-04-09 23:21:29,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/202009241823_202009241924.nc4 INFO 2024-04-09 23:21:29,506Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,572Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,638Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,718Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,796Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,861Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,927Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:29,992Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,066Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,130Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,199Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,265Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,329Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,394Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,458Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,523Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:30,573Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:30,578Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:30,582Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,585Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:30,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:30,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:30,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:30,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:30,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:30,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:30,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:30,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:30,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:30,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:30,645Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:30,648Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 148 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:30,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:30,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:30,682Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:30,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:30,691Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:30,708Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:30,724Z lrauvNc4ToNetcdf.py createSeries():299 depth : 147 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:30,769Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 146 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,820Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:30,845Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 146 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,896Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:30,920Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 146 v_t values found before 2020-09-24 18:23:00 and after 2020-09-24 19:24:00 INFO 2024-04-09 23:21:30,969Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:30,970Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/202009241823_202009241924.nc4 INFO 2024-04-09 23:21:31,101Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 8929 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:31,200Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 6 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/202009241823_202009241924.nc4 INFO 2024-04-09 23:21:31,200Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:31,202Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:21:31,202Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.426 0.0000214 0.0000285 456 3.41 0.83 1.55 2020-09-24 18:27:12.227174997 INFO 2024-04-09 23:21:31,205Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.367 0.0002204 0.0000318 7254 48.84 0.06 0.12 2020-09-24 19:16:02.995851994 INFO 2024-04-09 23:21:31,209Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.393 -0.0000000 0.0000085 248 1.66 0.51 0.94 2020-09-24 19:17:43.161143064 INFO 2024-04-09 23:21:31,211Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.394 0.0001610 0.0000184 41 1.01 1.80 3.35 2020-09-24 19:18:44.391655922 INFO 2024-04-09 23:21:31,214Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.368 0.0000683 -0.0000228 844 5.68 -0.40 -0.74 2020-09-24 19:24:25.415864944 INFO 2024-04-09 23:21:31,216Z lrauvNc4ToNetcdf.py nudge_coords():871 6: - - - 83 0.55 - - INFO 2024-04-09 23:21:31,217Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 8928 INFO 2024-04-09 23:21:31,241Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T172346/20200924T202459/data.csv INFO 2024-04-09 23:21:31,337Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:31,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:31,640Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:31,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/202009241823_202009241924_2S_scieng.nc INFO 2024-04-09 23:21:31,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009241823_202009241924.nc4 INFO 2024-04-09 23:21:32,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/slate0000_202009241823_202009241924.nc4 file... INFO 2024-04-09 23:21:32,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_202009241823_202009241924.nc4 INFO 2024-04-09 23:21:32,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T182346/slate0000_202009241823_202009241924.nc4 ERROR 2024-04-09 23:21:32,514Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,514Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,515Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,515Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,515Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,515Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,515Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,516Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,516Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,516Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,516Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,516Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,517Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,517Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,517Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:21:32,517Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:21:33,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T192459/202009241925_202009242326.nc4 file... INFO 2024-04-09 23:21:33,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009241925_202009242326.nc4 INFO 2024-04-09 23:21:33,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T192459/202009241925_202009242326.nc4 INFO 2024-04-09 23:21:33,692Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:33,842Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:33,990Z lrauvNc4ToNetcdf.py createSeries():299 depth : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,067Z lrauvNc4ToNetcdf.py createSeries():299 time : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,141Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,280Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,421Z lrauvNc4ToNetcdf.py createSeries():299 depth : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,498Z lrauvNc4ToNetcdf.py createSeries():299 time : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,574Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,716Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,876Z lrauvNc4ToNetcdf.py createSeries():299 depth : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:34,956Z lrauvNc4ToNetcdf.py createSeries():299 time : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,027Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,168Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,312Z lrauvNc4ToNetcdf.py createSeries():299 depth : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,386Z lrauvNc4ToNetcdf.py createSeries():299 time : 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:35,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:35,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:35,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:35,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:35,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:35,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:35,493Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 3 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:35,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:35,534Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 2 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,545Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:35,548Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 2 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:35,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:35,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:35,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:35,585Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:35,590Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:35,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:35,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:35,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:35,644Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:35,650Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:35,692Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:35,735Z lrauvNc4ToNetcdf.py createSeries():299 depth : 9 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:35,806Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:35,936Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:35,969Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:36,090Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:36,122Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 8 v_t values found before 2020-09-24 19:25:00 and after 2020-09-24 23:26:00 INFO 2024-04-09 23:21:36,250Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:36,250Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T192459/202009241925_202009242326.nc4 INFO 2024-04-09 23:21:36,396Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 35531 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:36,492Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 26 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T192459/202009241925_202009242326.nc4 INFO 2024-04-09 23:21:36,493Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:36,494Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 886 5.96 - - - INFO 2024-04-09 23:21:36,495Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 0.0000961 -0.0000546 822 5.53 -0.98 -1.83 2020-09-24 19:36:29.495321035 INFO 2024-04-09 23:21:36,498Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.358 0.0000799 -0.0000552 834 5.61 -0.98 -1.82 2020-09-24 19:42:06.451426029 INFO 2024-04-09 23:21:36,501Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.377 0.0000187 -0.0000141 821 5.52 -0.25 -0.47 2020-09-24 19:47:38.159425974 INFO 2024-04-09 23:21:36,503Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.383 0.0000266 0.0000273 825 5.55 0.49 0.91 2020-09-24 19:53:11.478693008 INFO 2024-04-09 23:21:36,506Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.367 0.0001039 -0.0000336 837 5.63 -0.60 -1.11 2020-09-24 19:58:49.654835939 INFO 2024-04-09 23:21:36,508Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.385 0.0000164 0.0000034 884 5.95 0.06 0.11 2020-09-24 20:04:46.822371960 INFO 2024-04-09 23:21:36,511Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.188 0.0000377 0.0000044 818 5.50 0.08 0.15 2020-09-24 20:10:17.526045084 INFO 2024-04-09 23:21:36,514Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.408 0.0000123 0.0000191 148 0.99 1.93 3.58 2020-09-24 20:11:17.123464108 INFO 2024-04-09 23:21:36,516Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.372 0.0000037 -0.0000001 215 1.44 -0.01 -0.02 2020-09-24 20:12:44.027065039 INFO 2024-04-09 23:21:36,519Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.374 -0.0002097 -0.0000808 3412 22.97 -0.35 -0.65 2020-09-24 20:35:42.551655054 INFO 2024-04-09 23:21:36,522Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.372 0.0000607 0.0000488 331 2.40 2.03 3.78 2020-09-24 20:38:06.652595997 INFO 2024-04-09 23:21:36,525Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.378 0.0000379 0.0000271 3398 22.87 0.12 0.22 2020-09-24 21:00:59.463468075 INFO 2024-04-09 23:21:36,529Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.380 0.0001144 -0.0000104 725 5.13 -0.20 -0.38 2020-09-24 21:06:07.759474993 INFO 2024-04-09 23:21:36,532Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.389 -0.0000315 -0.0000482 3565 24.00 -0.20 -0.37 2020-09-24 21:30:08.091464043 INFO 2024-04-09 23:21:36,535Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.349 -0.0000919 -0.0000434 341 2.50 -1.73 -3.22 2020-09-24 21:32:38.366200924 INFO 2024-04-09 23:21:36,538Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.391 0.0000153 0.0000811 3538 23.82 0.34 0.63 2020-09-24 21:56:27.742898941 INFO 2024-04-09 23:21:36,541Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.356 0.0000636 -0.0000614 441 3.14 -1.95 -3.63 2020-09-24 21:59:36.468033075 INFO 2024-04-09 23:21:36,544Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.385 -0.0002311 -0.0001424 2121 14.98 -0.95 -1.76 2020-09-24 22:14:35.878379107 INFO 2024-04-09 23:21:36,547Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.388 0.0001412 -0.0001061 922 6.26 -1.69 -3.14 2020-09-24 22:20:51.870722055 INFO 2024-04-09 23:21:36,550Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.373 0.0000900 -0.0000606 822 5.53 -1.09 -2.03 2020-09-24 22:26:23.977777958 INFO 2024-04-09 23:21:36,553Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.377 0.0000768 -0.0000480 831 5.59 -0.86 -1.59 2020-09-24 22:31:59.798537016 INFO 2024-04-09 23:21:36,556Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.347 0.0000179 -0.0000234 153 1.03 -2.27 -4.23 2020-09-24 22:33:01.740020037 INFO 2024-04-09 23:21:36,559Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.373 0.0000222 -0.0000126 211 1.41 -0.89 -1.66 2020-09-24 22:34:26.949611902 INFO 2024-04-09 23:21:36,562Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.374 0.0000563 0.0000801 3621 24.38 0.33 0.61 2020-09-24 22:58:49.903719902 INFO 2024-04-09 23:21:36,566Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.376 0.0000540 0.0000483 391 2.85 1.69 3.14 2020-09-24 23:01:41.466635942 INFO 2024-04-09 23:21:36,569Z lrauvNc4ToNetcdf.py nudge_coords():871 26: - - - 3617 24.35 - - INFO 2024-04-09 23:21:36,569Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 35530 INFO 2024-04-09 23:21:36,596Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T182500/20200925T002603/data.csv INFO 2024-04-09 23:21:36,693Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:36,700Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:37,116Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:37,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T192459/202009241925_202009242326_2S_scieng.nc INFO 2024-04-09 23:21:37,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009241925_202009242326.nc4 INFO 2024-04-09 23:21:37,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T232603/202009242326_202009250222.nc4 file... INFO 2024-04-09 23:21:37,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009242326_202009250222.nc4 INFO 2024-04-09 23:21:38,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T232603/202009242326_202009250222.nc4 INFO 2024-04-09 23:21:38,452Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,530Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,602Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,674Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,746Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,817Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,891Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:38,962Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,031Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,098Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,165Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,235Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,304Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,377Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,448Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,517Z lrauvNc4ToNetcdf.py createSeries():299 time : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:39,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:39,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:39,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:39,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:39,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:39,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:39,612Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:39,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:39,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:39,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:39,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:39,676Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:39,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:39,687Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:39,692Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:39,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:39,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:39,734Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:39,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:39,746Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:39,779Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,808Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:39,813Z lrauvNc4ToNetcdf.py createSeries():299 depth : 11 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:39,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:39,876Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 10 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:40,015Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:40,050Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 10 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:40,211Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:40,250Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 10 v_t values found before 2020-09-24 23:26:00 and after 2020-09-25 02:22:00 INFO 2024-04-09 23:21:40,402Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:40,403Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T232603/202009242326_202009250222.nc4 INFO 2024-04-09 23:21:40,553Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 25793 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:40,647Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T232603/202009242326_202009250222.nc4 INFO 2024-04-09 23:21:40,647Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:40,649Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.26 - - - INFO 2024-04-09 23:21:40,650Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.404 -0.0000484 -0.0000321 38 0.25 -12.90 -24.04 2020-09-24 23:26:34.281357050 INFO 2024-04-09 23:21:40,652Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.389 0.0001882 -0.0001709 1911 13.17 -1.29 -2.40 2020-09-24 23:39:45.194550037 INFO 2024-04-09 23:21:40,655Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.384 0.0003599 -0.0001485 1463 10.08 -1.46 -2.73 2020-09-24 23:49:50.111382961 INFO 2024-04-09 23:21:40,657Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.375 0.0000859 -0.0000764 316 2.21 -3.43 -6.42 2020-09-24 23:52:02.866535902 INFO 2024-04-09 23:21:40,659Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.375 0.0000363 -0.0000133 181 1.38 -0.95 -1.78 2020-09-24 23:53:26.201601982 INFO 2024-04-09 23:21:40,662Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.406 0.0001793 0.0001899 13744 92.54 0.20 0.38 2020-09-25 01:25:59.035689116 INFO 2024-04-09 23:21:40,667Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.382 0.0000582 -0.0000228 520 3.88 -0.58 -1.09 2020-09-25 01:29:51.975517988 INFO 2024-04-09 23:21:40,670Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.383 0.0001673 0.0000309 6917 46.57 0.07 0.12 2020-09-25 02:16:26.599090099 INFO 2024-04-09 23:21:40,674Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.401 0.0000415 -0.0000806 535 3.82 -2.10 -3.91 2020-09-25 02:20:16.314908981 INFO 2024-04-09 23:21:40,677Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.397 0.0000268 -0.0001056 41 0.86 -12.16 -22.63 2020-09-25 02:21:08.597613096 INFO 2024-04-09 23:21:40,680Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 124 0.91 - - INFO 2024-04-09 23:21:40,680Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 25792 INFO 2024-04-09 23:21:40,712Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200924T222603/20200925T032204/data.csv INFO 2024-04-09 23:21:40,809Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:40,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:41,308Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:41,666Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200924T232603/202009242326_202009250222_2S_scieng.nc INFO 2024-04-09 23:21:41,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009242326_202009250222.nc4 INFO 2024-04-09 23:21:42,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T022204/202009250222_202009250339.nc4 file... INFO 2024-04-09 23:21:42,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009250222_202009250339.nc4 INFO 2024-04-09 23:21:42,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T022204/202009250222_202009250339.nc4 INFO 2024-04-09 23:21:42,471Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,534Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,598Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,663Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,725Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,786Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,846Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,908Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:42,972Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,033Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,095Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,156Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,217Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,293Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,376Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,446Z lrauvNc4ToNetcdf.py createSeries():299 time : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:43,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:43,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:43,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:43,509Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 1 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:43,514Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 2 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:43,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:43,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:43,529Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 1 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:43,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:43,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:43,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:43,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:43,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:43,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:43,568Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:43,589Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:43,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:43,599Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:43,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:43,608Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:43,626Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:43,644Z lrauvNc4ToNetcdf.py createSeries():299 depth : 82 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:43,685Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 80 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,732Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:43,752Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 80 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,799Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:43,820Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 80 v_t values found before 2020-09-25 02:22:00 and after 2020-09-25 03:39:00 INFO 2024-04-09 23:21:43,870Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:43,871Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T022204/202009250222_202009250339.nc4 INFO 2024-04-09 23:21:44,001Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 11451 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:44,151Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T022204/202009250222_202009250339.nc4 INFO 2024-04-09 23:21:44,152Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:44,153Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 1163 7.97 - - - INFO 2024-04-09 23:21:44,154Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.337 0.0000961 -0.0000750 919 6.21 -1.20 -2.24 2020-09-25 02:36:15.513951063 INFO 2024-04-09 23:21:44,156Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.407 0.0000728 -0.0003167 824 5.54 -5.67 -10.59 2020-09-25 02:41:48.359385014 INFO 2024-04-09 23:21:44,158Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.379 0.0001957 0.0000718 823 5.53 1.28 2.40 2020-09-25 02:47:20.854445934 INFO 2024-04-09 23:21:44,160Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.363 0.0001598 -0.0002955 818 5.50 -5.31 -9.95 2020-09-25 02:52:51.342750072 INFO 2024-04-09 23:21:44,162Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.372 -0.0000131 0.0002071 952 6.40 3.20 5.99 2020-09-25 02:59:15.941598892 INFO 2024-04-09 23:21:44,165Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.388 -0.0000336 -0.0000082 134 1.06 -0.76 -1.43 2020-09-25 03:00:19.658431053 INFO 2024-04-09 23:21:44,168Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.378 0.0000264 -0.0000232 122 0.82 -2.81 -5.28 2020-09-25 03:01:08.986624956 INFO 2024-04-09 23:21:44,170Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.394 -0.0000413 -0.0000753 275 1.85 -4.03 -7.56 2020-09-25 03:03:00.103759050 INFO 2024-04-09 23:21:44,172Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.374 0.0001139 0.0001617 4428 29.85 0.54 1.00 2020-09-25 03:32:51.795568943 INFO 2024-04-09 23:21:44,175Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.373 0.0001753 -0.0002869 863 5.80 -4.92 -9.16 2020-09-25 03:38:40.487581968 INFO 2024-04-09 23:21:44,178Z lrauvNc4ToNetcdf.py nudge_coords():871 11: - - - 129 0.86 - - INFO 2024-04-09 23:21:44,178Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 11450 INFO 2024-04-09 23:21:44,212Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T012204/20200925T043932/data.csv INFO 2024-04-09 23:21:44,311Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:44,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:44,828Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:45,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T022204/202009250222_202009250339_2S_scieng.nc INFO 2024-04-09 23:21:45,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009250222_202009250339.nc4 INFO 2024-04-09 23:21:46,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T033933/202009250339_202009250534.nc4 file... INFO 2024-04-09 23:21:46,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009250339_202009250534.nc4 INFO 2024-04-09 23:21:46,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T033933/202009250339_202009250534.nc4 INFO 2024-04-09 23:21:46,601Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:46,696Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:46,791Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:46,898Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:46,998Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,087Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,181Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,295Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,392Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,469Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,553Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,632Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,717Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,799Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,875Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:47,953Z lrauvNc4ToNetcdf.py createSeries():299 time : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:48,011Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 2 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:48,016Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 2 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:48,021Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 2 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:48,026Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 2 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:48,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:48,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:48,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:48,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:48,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:21:48,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:21:48,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:21:48,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:21:48,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:21:48,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:21:48,104Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:48,125Z lrauvNc4ToNetcdf.py createSeries():299 platform_battery_charge: 1 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:48,137Z lrauvNc4ToNetcdf.py createSeries():299 platform_battery_voltage: 1 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:48,147Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:48,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:48,157Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:48,180Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:48,203Z lrauvNc4ToNetcdf.py createSeries():299 depth : 96 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:48,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:48,261Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 92 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:49,200Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:49,235Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 92 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:50,144Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:50,179Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 92 v_t values found before 2020-09-25 03:39:00 and after 2020-09-25 05:34:00 INFO 2024-04-09 23:21:51,189Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:51,190Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T033933/202009250339_202009250534.nc4 INFO 2024-04-09 23:21:51,366Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 16958 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:51,520Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 8 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T033933/202009250339_202009250534.nc4 INFO 2024-04-09 23:21:51,520Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:51,521Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 40 0.26 - - - INFO 2024-04-09 23:21:51,522Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.367 0.0000477 -0.0000491 1071 7.21 -0.68 -1.26 2020-09-25 03:47:01.870740891 INFO 2024-04-09 23:21:51,525Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.410 0.0003088 -0.0001039 8198 55.20 -0.19 -0.35 2020-09-25 04:42:14.019426107 INFO 2024-04-09 23:21:51,528Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.372 0.0000900 -0.0000443 376 2.73 -1.62 -3.01 2020-09-25 04:44:57.969649076 INFO 2024-04-09 23:21:51,531Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.323 0.0001528 -0.0000355 6725 45.28 -0.08 -0.15 2020-09-25 05:30:15.050573111 INFO 2024-04-09 23:21:51,534Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.323 0.0000772 -0.0000386 414 2.81 -1.37 -2.55 2020-09-25 05:33:04.023900032 INFO 2024-04-09 23:21:51,537Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.443 -0.0000693 -0.0000893 41 0.94 -9.42 -17.53 2020-09-25 05:34:01.001322985 INFO 2024-04-09 23:21:51,539Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.351 -0.0000221 -0.0000143 83 0.55 -2.59 -4.82 2020-09-25 05:34:34.587246895 INFO 2024-04-09 23:21:51,542Z lrauvNc4ToNetcdf.py nudge_coords():871 8: - - - 9 0.06 - - INFO 2024-04-09 23:21:51,542Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 16957 INFO 2024-04-09 23:21:51,572Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T023933/20200925T063438/data.csv INFO 2024-04-09 23:21:51,693Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:51,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:21:52,264Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:21:52,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T033933/202009250339_202009250534_2S_scieng.nc INFO 2024-04-09 23:21:52,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009250339_202009250534.nc4 INFO 2024-04-09 23:21:53,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T053439/202009250534_202009251640.nc4 file... INFO 2024-04-09 23:21:53,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009250534_202009251640.nc4 INFO 2024-04-09 23:21:54,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T053439/202009250534_202009251640.nc4 INFO 2024-04-09 23:21:54,474Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:54,629Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:54,776Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:54,928Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,073Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,212Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,346Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,485Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,620Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,757Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:55,892Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,023Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,158Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,295Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,433Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,573Z lrauvNc4ToNetcdf.py createSeries():299 time : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:21:56,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:21:56,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:21:56,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:21:56,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:21:56,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:21:56,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:21:56,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:21:56,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:21:56,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:21:56,830Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:21:56,832Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:21:56,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:21:56,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:21:56,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:21:56,851Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:56,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:21:56,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:21:56,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:21:56,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:21:56,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:56,954Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:57,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:57,043Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:57,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:57,132Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:57,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:21:57,254Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 52 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:57,920Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:57,966Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 52 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:58,581Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:58,627Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 52 v_t values found before 2020-09-25 05:34:00 and after 2020-09-25 16:40:00 INFO 2024-04-09 23:21:59,160Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:21:59,162Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T053439/202009250534_202009251640.nc4 INFO 2024-04-09 23:21:59,382Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 98625 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:21:59,478Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 36 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T053439/202009250534_202009251640.nc4 INFO 2024-04-09 23:21:59,479Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:21:59,481Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 317 2.13 - - - INFO 2024-04-09 23:21:59,483Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.367 0.0001474 0.0000574 7142 48.08 0.12 0.22 2020-09-25 06:24:52.246818066 INFO 2024-04-09 23:21:59,486Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0001265 -0.0000977 388 2.81 -3.53 -6.44 2020-09-25 06:27:41.326797009 INFO 2024-04-09 23:21:59,489Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.385 -0.0001435 -0.0002614 7362 49.56 -0.54 -0.98 2020-09-25 07:17:15.594460011 INFO 2024-04-09 23:21:59,493Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.370 -0.0000018 0.0000000 128 0.94 0.00 0.00 2020-09-25 07:18:12.398627996 INFO 2024-04-09 23:21:59,496Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.388 0.0005492 0.0006283 7217 48.59 1.36 2.40 2020-09-25 08:06:48.055367947 INFO 2024-04-09 23:21:59,500Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.381 0.0000139 0.0000048 138 1.01 0.50 0.89 2020-09-25 08:07:48.913430929 INFO 2024-04-09 23:21:59,504Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.389 0.0014046 -0.0000818 7201 48.48 -0.18 -0.31 2020-09-25 08:56:18.115475893 INFO 2024-04-09 23:21:59,508Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.376 0.0002099 -0.0000022 110 0.82 -0.29 -0.50 2020-09-25 08:57:07.983666897 INFO 2024-04-09 23:21:59,512Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.391 -0.0001568 0.0001972 7808 52.57 0.41 0.70 2020-09-25 09:49:42.446439028 INFO 2024-04-09 23:21:59,516Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.375 -0.0000980 0.0000934 102 0.74 13.72 23.42 2020-09-25 09:50:27.202464104 INFO 2024-04-09 23:21:59,519Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.388 0.0001152 -0.0000461 7408 49.87 -0.10 -0.17 2020-09-25 10:40:20.023199081 INFO 2024-04-09 23:21:59,523Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.394 0.0000604 -0.0000498 250 1.76 -3.12 -5.24 2020-09-25 10:42:06.115560055 INFO 2024-04-09 23:21:59,526Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.386 0.0001307 -0.0000996 7408 49.87 -0.22 -0.37 2020-09-25 11:31:58.945343018 INFO 2024-04-09 23:21:59,531Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.395 -0.0000475 -0.0000260 152 1.07 -2.71 -4.49 2020-09-25 11:33:03.735390902 INFO 2024-04-09 23:21:59,535Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.356 -0.0003969 -0.0008137 7298 49.13 -1.88 -3.07 2020-09-25 12:22:12.159118891 INFO 2024-04-09 23:21:59,539Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.372 0.0000475 -0.0000633 415 2.93 -2.45 -4.00 2020-09-25 12:25:08.350549936 INFO 2024-04-09 23:21:59,542Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.372 -0.0037196 -0.0030231 5972 40.21 -8.60 -13.93 2020-09-25 13:05:21.042849064 INFO 2024-04-09 23:21:59,546Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.372 -0.0001325 -0.0000798 188 1.35 -6.78 -10.99 2020-09-25 13:06:42.189595938 INFO 2024-04-09 23:21:59,550Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.356 -0.0023629 -0.0025810 7123 47.96 -6.16 -9.97 2020-09-25 13:54:39.916332006 INFO 2024-04-09 23:21:59,554Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.355 -0.0001573 0.0000070 143 1.04 0.77 1.24 2020-09-25 13:55:42.933248997 INFO 2024-04-09 23:21:59,557Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.356 -0.0038731 -0.0021476 7868 53.09 -4.63 -7.49 2020-09-25 14:48:48.983695030 INFO 2024-04-09 23:21:59,560Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.386 -0.0000723 -0.0000080 356 2.59 -0.35 -0.57 2020-09-25 14:51:24.651550055 INFO 2024-04-09 23:21:59,564Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.375 -0.0004743 -0.0005125 1619 10.89 -5.40 -8.72 2020-09-25 15:02:18.738635063 INFO 2024-04-09 23:21:59,567Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.396 -0.0002345 -0.0001928 530 3.71 -5.97 -9.64 2020-09-25 15:06:01.586426973 INFO 2024-04-09 23:21:59,570Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.373 -0.0006374 0.0003185 3169 21.33 1.71 2.77 2020-09-25 15:27:21.875566006 INFO 2024-04-09 23:21:59,574Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.376 -0.0004879 0.0003315 268 1.89 20.18 32.56 2020-09-25 15:29:15.482552052 INFO 2024-04-09 23:21:59,577Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.359 0.0014940 -0.0007071 3343 22.50 -3.61 -5.82 2020-09-25 15:51:46.082707882 INFO 2024-04-09 23:21:59,580Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.357 -0.0001487 0.0000815 140 1.03 9.12 14.72 2020-09-25 15:52:47.993827105 INFO 2024-04-09 23:21:59,584Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.368 -0.0000487 0.0004622 1234 8.30 6.40 10.31 2020-09-25 16:01:06.542730093 INFO 2024-04-09 23:21:59,587Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.380 0.0000852 0.0002838 862 5.80 5.63 9.07 2020-09-25 16:06:54.783379078 INFO 2024-04-09 23:21:59,590Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.380 0.0000482 0.0002662 820 5.51 5.55 8.94 2020-09-25 16:12:26.079467058 INFO 2024-04-09 23:21:59,593Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.376 -0.0001791 0.0004100 820 5.51 8.55 13.77 2020-09-25 16:17:57.358633995 INFO 2024-04-09 23:21:59,596Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.375 0.0000187 0.0003370 903 6.07 6.38 10.28 2020-09-25 16:24:02.203684092 INFO 2024-04-09 23:21:59,600Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.384 0.0001150 0.0003623 871 5.86 7.12 11.46 2020-09-25 16:29:54.100408077 INFO 2024-04-09 23:21:59,603Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.374 -0.0000725 0.0003408 824 5.54 7.08 11.40 2020-09-25 16:35:27.019658089 INFO 2024-04-09 23:21:59,606Z lrauvNc4ToNetcdf.py nudge_coords():871 36: - - - 727 4.89 - - INFO 2024-04-09 23:21:59,607Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 98624 INFO 2024-04-09 23:21:59,635Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T043439/20200925T174021/data.csv INFO 2024-04-09 23:21:59,732Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:21:59,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:00,257Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:00,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T053439/202009250534_202009251640_2S_scieng.nc INFO 2024-04-09 23:22:00,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009250534_202009251640.nc4 INFO 2024-04-09 23:22:01,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164023/202009251640_202009251649.nc4 file... INFO 2024-04-09 23:22:01,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009251640_202009251649.nc4 INFO 2024-04-09 23:22:01,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164023/202009251640_202009251649.nc4 INFO 2024-04-09 23:22:01,917Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:01,969Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,023Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,077Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,130Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,184Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,238Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,291Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,344Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,402Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,468Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,521Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,574Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,629Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,682Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,735Z lrauvNc4ToNetcdf.py createSeries():299 time : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:02,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:02,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:02,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:02,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:02,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:02,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:02,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:02,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:02,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:22:02,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:22:02,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:02,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:02,810Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:02,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:02,813Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,818Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:02,821Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:02,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:02,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:02,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:02,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:02,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:02,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:02,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:02,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:02,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:02,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:02,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:02,867Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:02,873Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,877Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:02,878Z lrauvNc4ToNetcdf.py createSeries():299 depth : 40 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:02,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:02,908Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 38 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:03,244Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:03,269Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 38 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:03,631Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:03,654Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 38 v_t values found before 2020-09-25 16:40:00 and after 2020-09-25 16:49:00 INFO 2024-04-09 23:22:04,008Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:04,008Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164023/202009251640_202009251649.nc4 INFO 2024-04-09 23:22:04,145Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 936 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:04,278Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164023/202009251640_202009251649.nc4 INFO 2024-04-09 23:22:04,278Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:04,279Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:04,280Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.375 -0.0000043 0.0001228 172 1.27 11.18 17.97 2020-09-25 16:44:05.494777918 INFO 2024-04-09 23:22:04,283Z lrauvNc4ToNetcdf.py nudge_coords():871 2: - - - 763 5.16 - - INFO 2024-04-09 23:22:04,283Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 935 INFO 2024-04-09 23:22:04,315Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T154034/20200925T174916/data.csv INFO 2024-04-09 23:22:04,411Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:04,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:05,018Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:08,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164023/202009251640_202009251649_2S_scieng.nc INFO 2024-04-09 23:22:08,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009251640_202009251649.nc4 INFO 2024-04-09 23:22:08,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164917/202009251649_202009251702.nc4 file... INFO 2024-04-09 23:22:08,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009251649_202009251702.nc4 INFO 2024-04-09 23:22:09,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164917/202009251649_202009251702.nc4 INFO 2024-04-09 23:22:09,041Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,110Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,176Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,246Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,312Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,380Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,447Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,513Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,579Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,646Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,713Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,783Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,851Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,921Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:09,986Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,055Z lrauvNc4ToNetcdf.py createSeries():299 time : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:10,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:10,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:10,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:10,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:10,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:10,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:10,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:10,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:10,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:22:10,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:22:10,135Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:10,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:10,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:10,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:10,141Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:10,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:10,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:10,169Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:10,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:10,175Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:10,182Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:10,188Z lrauvNc4ToNetcdf.py createSeries():299 depth : 137 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:10,223Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 134 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,271Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:10,294Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 134 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,341Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:10,365Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 134 v_t values found before 2020-09-25 16:49:00 and after 2020-09-25 17:02:00 INFO 2024-04-09 23:22:10,417Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:10,418Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164917/202009251649_202009251702.nc4 INFO 2024-04-09 23:22:10,531Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1524 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:10,640Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164917/202009251649_202009251702.nc4 INFO 2024-04-09 23:22:10,640Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:10,641Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:10,641Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 -0.0000002 0.0000655 132 0.97 7.82 12.56 2020-09-25 16:53:32.606506109 INFO 2024-04-09 23:22:10,644Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.397 0.0000658 0.0004245 954 6.42 7.63 12.26 2020-09-25 16:59:58.060517073 INFO 2024-04-09 23:22:10,646Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 437 2.94 - - INFO 2024-04-09 23:22:10,646Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1523 INFO 2024-04-09 23:22:10,679Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T154928/20200925T180254/data.csv INFO 2024-04-09 23:22:10,777Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:10,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:11,004Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:11,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T164917/202009251649_202009251702_2S_scieng.nc INFO 2024-04-09 23:22:11,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009251649_202009251702.nc4 INFO 2024-04-09 23:22:12,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T170256/202009251703_202009251941.nc4 file... INFO 2024-04-09 23:22:12,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202009251703_202009251941.nc4 INFO 2024-04-09 23:22:12,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T170256/202009251703_202009251941.nc4 INFO 2024-04-09 23:22:12,845Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:12,975Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,105Z lrauvNc4ToNetcdf.py createSeries():299 depth : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,215Z lrauvNc4ToNetcdf.py createSeries():299 time : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,319Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,437Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,551Z lrauvNc4ToNetcdf.py createSeries():299 depth : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,661Z lrauvNc4ToNetcdf.py createSeries():299 time : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,771Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:13,886Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,021Z lrauvNc4ToNetcdf.py createSeries():299 depth : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,142Z lrauvNc4ToNetcdf.py createSeries():299 time : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,260Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,375Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,512Z lrauvNc4ToNetcdf.py createSeries():299 depth : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,631Z lrauvNc4ToNetcdf.py createSeries():299 time : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,710Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:14,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:14,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:14,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:14,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:14,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:14,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:14,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:14,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:14,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:14,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:14,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:14,786Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:14,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:14,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:14,800Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:14,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:14,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:14,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:14,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:14,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:14,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:14,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:14,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:14,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:14,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:14,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:14,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:14,955Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:14,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:14,967Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:14,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:15,003Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:15,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:15,040Z lrauvNc4ToNetcdf.py createSeries():299 depth : 57 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:15,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:15,129Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 56 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:16,033Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:16,084Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 56 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:16,991Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:17,044Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 56 v_t values found before 2020-09-25 17:03:00 and after 2020-09-25 19:41:00 INFO 2024-04-09 23:22:17,940Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:17,941Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T170256/202009251703_202009251941.nc4 INFO 2024-04-09 23:22:18,180Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 23244 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:18,337Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 17 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T170256/202009251703_202009251941.nc4 INFO 2024-04-09 23:22:18,338Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:18,339Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:18,340Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.384 0.0000260 0.0000318 76 0.51 7.27 11.67 2020-09-25 17:05:00.652420998 INFO 2024-04-09 23:22:18,342Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.351 -0.0000265 0.0001100 181 1.27 10.01 16.06 2020-09-25 17:06:17.175200939 INFO 2024-04-09 23:22:18,344Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.344 0.0002687 0.0001472 1060 7.16 2.37 3.81 2020-09-25 17:13:27.311597109 INFO 2024-04-09 23:22:18,347Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.347 0.0001562 0.0002523 576 3.87 7.53 12.07 2020-09-25 17:17:20.051565886 INFO 2024-04-09 23:22:18,349Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.345 0.0000228 0.0000603 120 0.80 8.69 13.93 2020-09-25 17:18:08.544559002 INFO 2024-04-09 23:22:18,352Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.377 0.0032511 0.0050368 11570 77.91 7.47 11.98 2020-09-25 18:36:03.817598104 INFO 2024-04-09 23:22:18,357Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.378 0.0000079 0.0000059 866 5.83 0.12 0.19 2020-09-25 18:41:53.798572063 INFO 2024-04-09 23:22:18,360Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.353 -0.0001917 -0.0000158 455 3.06 -0.60 -0.96 2020-09-25 18:44:57.648590088 INFO 2024-04-09 23:22:18,363Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.356 -0.0000786 0.0000122 134 0.90 1.57 2.51 2020-09-25 18:45:51.785065889 INFO 2024-04-09 23:22:18,365Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.386 0.0008689 0.0000614 3249 21.87 0.32 0.52 2020-09-25 19:07:44.375566959 INFO 2024-04-09 23:22:18,368Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.367 0.0000578 -0.0001142 225 1.63 -8.06 -12.99 2020-09-25 19:09:22.459666014 INFO 2024-04-09 23:22:18,371Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.354 0.0008585 -0.0002155 1054 7.23 -3.42 -5.52 2020-09-25 19:16:36.731372118 INFO 2024-04-09 23:22:18,373Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.394 -0.0003074 -0.0008269 818 5.50 -17.25 -27.85 2020-09-25 19:22:07.163316965 INFO 2024-04-09 23:22:18,376Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.367 0.0009991 -0.0007471 823 5.54 -15.48 -25.00 2020-09-25 19:27:39.738739014 INFO 2024-04-09 23:22:18,378Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.371 -0.0034658 0.0007050 819 5.51 14.69 23.72 2020-09-25 19:33:10.626566887 INFO 2024-04-09 23:22:18,382Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.383 0.0002672 -0.0004132 818 5.50 -8.61 -13.91 2020-09-25 19:38:41.202552080 INFO 2024-04-09 23:22:18,385Z lrauvNc4ToNetcdf.py nudge_coords():871 17: - - - 399 2.68 - - INFO 2024-04-09 23:22:18,386Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 23243 INFO 2024-04-09 23:22:18,435Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20200925T160307/20200925T204122/data.csv INFO 2024-04-09 23:22:18,536Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:18,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:18,849Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:19,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20200922_20200925/20200925T170256/202009251703_202009251941_2S_scieng.nc INFO 2024-04-09 23:22:19,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202009251703_202009251941.nc4 INFO 2024-04-09 23:22:20,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201103T224726/202011032247_202011040303.nc4 file... INFO 2024-04-09 23:22:20,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011032247_202011040303.nc4 INFO 2024-04-09 23:22:20,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201103T224726/202011032247_202011040303.nc4 INFO 2024-04-09 23:22:20,538Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:20,627Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:20,716Z lrauvNc4ToNetcdf.py createSeries():299 depth : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:20,805Z lrauvNc4ToNetcdf.py createSeries():299 time : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:20,903Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,001Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,106Z lrauvNc4ToNetcdf.py createSeries():299 depth : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,232Z lrauvNc4ToNetcdf.py createSeries():299 time : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,339Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,419Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,503Z lrauvNc4ToNetcdf.py createSeries():299 depth : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,584Z lrauvNc4ToNetcdf.py createSeries():299 time : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,662Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,740Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,817Z lrauvNc4ToNetcdf.py createSeries():299 depth : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,897Z lrauvNc4ToNetcdf.py createSeries():299 time : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:21,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:21,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:21,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:21,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:21,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:22,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:22,016Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:22,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:22,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:22,076Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:22,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:22,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:22,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:22,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:22,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:22,129Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:22,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:22,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:22,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:22,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:22,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:22,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:22,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:22,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:22,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:22,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:22,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:22,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:22,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:22,398Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:22,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:22,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:22,412Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:22,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:22,462Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:22,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:22,511Z lrauvNc4ToNetcdf.py createSeries():299 depth : 109 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:22,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:22,586Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 106 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:23,641Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:23,676Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 106 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:24,727Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:24,761Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 106 v_t values found before 2020-11-03 22:47:00 and after 2020-11-04 03:03:00 INFO 2024-04-09 23:22:25,810Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:25,811Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201103T224726/202011032247_202011040303.nc4 INFO 2024-04-09 23:22:25,963Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 37833 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:26,067Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 24 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201103T224726/202011032247_202011040303.nc4 INFO 2024-04-09 23:22:26,067Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:26,069Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 282 1.89 - - - INFO 2024-04-09 23:22:26,069Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.398 0.0000119 -0.0000157 348 2.34 -0.78 -1.25 2020-11-03 22:51:40.566206932 INFO 2024-04-09 23:22:26,072Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 -0.0000821 -0.0001418 9163 61.71 -0.27 -0.43 2020-11-03 23:53:23.644462109 INFO 2024-04-09 23:22:26,077Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.380 0.0000887 0.0000482 345 2.60 2.15 3.43 2020-11-03 23:56:00.205365896 INFO 2024-04-09 23:22:26,080Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.363 -0.0000000 -0.0000082 41 0.27 -3.55 -5.64 2020-11-03 23:56:16.786700010 INFO 2024-04-09 23:22:26,083Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.391 0.0001081 -0.0000530 843 5.73 -1.08 -1.72 2020-11-04 00:02:00.838032961 INFO 2024-04-09 23:22:26,086Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.367 0.0000198 0.0000598 224 1.51 4.61 7.34 2020-11-04 00:03:31.722501040 INFO 2024-04-09 23:22:26,089Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.366 0.0000635 0.0000127 309 2.08 0.71 1.13 2020-11-04 00:05:36.747153997 INFO 2024-04-09 23:22:26,092Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.389 0.0002279 -0.0007447 8706 58.62 -1.50 -2.35 2020-11-04 01:04:14.158109903 INFO 2024-04-09 23:22:26,096Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.361 0.0000915 -0.0000167 1153 8.13 -0.24 -0.38 2020-11-04 01:12:22.577655077 INFO 2024-04-09 23:22:26,099Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.383 0.0001146 -0.0000262 821 5.52 -0.56 -0.88 2020-11-04 01:17:54.270330906 INFO 2024-04-09 23:22:26,102Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.377 0.0000971 -0.0000210 753 5.07 -0.49 -0.77 2020-11-04 01:22:58.606400013 INFO 2024-04-09 23:22:26,105Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.417 0.0000135 -0.0000093 235 1.58 -0.69 -1.09 2020-11-04 01:24:33.983316898 INFO 2024-04-09 23:22:26,108Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.358 0.0001240 -0.0000419 353 2.38 -2.08 -3.26 2020-11-04 01:26:57.278507948 INFO 2024-04-09 23:22:26,111Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.379 0.0000162 -0.0002868 3201 21.55 -1.55 -2.47 2020-11-04 01:48:30.826304913 INFO 2024-04-09 23:22:26,114Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.327 0.0000229 -0.0000368 288 2.05 -2.09 -3.32 2020-11-04 01:50:34.425282955 INFO 2024-04-09 23:22:26,117Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.432 0.0000648 -0.0000154 298 2.20 -0.81 -1.29 2020-11-04 01:52:46.959355116 INFO 2024-04-09 23:22:26,120Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.368 0.0003274 -0.0000458 3100 20.87 -0.26 -0.41 2020-11-04 02:13:39.441164017 INFO 2024-04-09 23:22:26,123Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.378 0.0000767 -0.0000486 593 4.16 -1.36 -2.17 2020-11-04 02:17:49.329278946 INFO 2024-04-09 23:22:26,126Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.362 0.0001705 -0.0000422 3238 21.80 -0.23 -0.36 2020-11-04 02:39:37.718684912 INFO 2024-04-09 23:22:26,129Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.359 0.0000165 -0.0000101 322 2.22 -0.53 -0.84 2020-11-04 02:41:51.422247887 INFO 2024-04-09 23:22:26,132Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.304 0.0000971 0.0000178 1073 7.43 0.28 0.44 2020-11-04 02:49:17.504451035 INFO 2024-04-09 23:22:26,135Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.375 0.0001057 -0.0000583 820 5.51 -1.23 -1.96 2020-11-04 02:54:48.798222065 INFO 2024-04-09 23:22:26,138Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.376 0.0000471 -0.0000121 861 5.79 -0.24 -0.39 2020-11-04 03:00:36.743443012 INFO 2024-04-09 23:22:26,140Z lrauvNc4ToNetcdf.py nudge_coords():871 24: - - - 462 3.10 - - INFO 2024-04-09 23:22:26,141Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 37832 INFO 2024-04-09 23:22:26,171Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201103T214726/20201104T040343/data.csv INFO 2024-04-09 23:22:26,272Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:26,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:26,697Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:26,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201103T224726/202011032247_202011040303_2S_scieng.nc INFO 2024-04-09 23:22:26,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011032247_202011040303.nc4 INFO 2024-04-09 23:22:27,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T030345/202011040303_202011040351.nc4 file... INFO 2024-04-09 23:22:27,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011040303_202011040351.nc4 INFO 2024-04-09 23:22:27,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T030345/202011040303_202011040351.nc4 INFO 2024-04-09 23:22:27,930Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:27,997Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,066Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,136Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,204Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,276Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,378Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,474Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,593Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,661Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,726Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,791Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,856Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,923Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:28,988Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,054Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:29,105Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:29,110Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:29,114Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:29,118Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:29,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:29,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:29,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:29,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:29,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:29,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:29,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:29,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:29,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:29,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:29,176Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:29,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:29,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:29,212Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:29,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:29,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:29,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:29,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:29,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:29,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:29,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:29,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:29,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:29,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:29,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:29,288Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:29,302Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:29,314Z lrauvNc4ToNetcdf.py createSeries():299 depth : 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:29,355Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,630Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:29,658Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:29,934Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:29,958Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 25 v_t values found before 2020-11-04 03:03:00 and after 2020-11-04 03:51:00 INFO 2024-04-09 23:22:30,237Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:30,238Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T030345/202011040303_202011040351.nc4 INFO 2024-04-09 23:22:30,357Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 6393 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:30,468Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T030345/202011040303_202011040351.nc4 INFO 2024-04-09 23:22:30,469Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:30,470Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:30,470Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.383 0.0000209 -0.0000675 851 5.74 -1.37 -2.18 2020-11-04 03:13:48.110698938 INFO 2024-04-09 23:22:30,473Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.368 0.0001654 -0.0000154 3505 23.61 -0.08 -0.12 2020-11-04 03:37:25.317585945 INFO 2024-04-09 23:22:30,475Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.355 0.0000754 -0.0000563 2037 13.74 -0.48 -0.76 2020-11-04 03:51:09.835129976 INFO 2024-04-09 23:22:30,478Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 0 0.00 - - INFO 2024-04-09 23:22:30,478Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 6393 INFO 2024-04-09 23:22:30,503Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T020354/20201104T045110/data.csv INFO 2024-04-09 23:22:30,600Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:30,605Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:30,961Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:31,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T030345/202011040303_202011040351_2S_scieng.nc INFO 2024-04-09 23:22:31,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011040303_202011040351.nc4 INFO 2024-04-09 23:22:31,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T035248/202011040352_202011040406.nc4 file... INFO 2024-04-09 23:22:31,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011040352_202011040406.nc4 INFO 2024-04-09 23:22:32,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T035248/202011040352_202011040406.nc4 INFO 2024-04-09 23:22:32,295Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,352Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,408Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,464Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,531Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,589Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,645Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,702Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,758Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,813Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,871Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,928Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:32,984Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,042Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,099Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,155Z lrauvNc4ToNetcdf.py createSeries():299 time : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:33,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:33,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:33,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:33,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:33,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:33,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:33,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:33,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:33,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:22:33,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:22:33,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:33,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:33,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:33,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:33,236Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:33,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:33,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:33,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:33,256Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:33,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:33,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:33,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:33,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:33,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:33,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:33,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:33,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:33,291Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:33,299Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,304Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:33,305Z lrauvNc4ToNetcdf.py createSeries():299 depth : 113 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:33,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:33,338Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 109 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:34,318Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:34,336Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 109 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:35,301Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:35,320Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 109 v_t values found before 2020-11-04 03:52:00 and after 2020-11-04 04:06:00 INFO 2024-04-09 23:22:36,264Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:36,265Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T035248/202011040352_202011040406.nc4 INFO 2024-04-09 23:22:36,361Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1699 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:36,454Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T035248/202011040352_202011040406.nc4 INFO 2024-04-09 23:22:36,455Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:36,456Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:36,457Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.378 0.0000463 -0.0000052 163 1.26 -0.48 -0.76 2020-11-04 03:56:22.928971052 INFO 2024-04-09 23:22:36,459Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.406 0.0000208 0.0000229 785 5.31 0.50 0.80 2020-11-04 04:01:42.016129016 INFO 2024-04-09 23:22:36,461Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 750 5.05 - - INFO 2024-04-09 23:22:36,461Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 1698 INFO 2024-04-09 23:22:36,481Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T025259/20201104T050645/data.csv INFO 2024-04-09 23:22:36,580Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:36,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:36,877Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:37,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T035248/202011040352_202011040406_2S_scieng.nc INFO 2024-04-09 23:22:37,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011040352_202011040406.nc4 INFO 2024-04-09 23:22:37,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T040744/202011040407_202011040436.nc4 file... INFO 2024-04-09 23:22:37,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011040407_202011040436.nc4 INFO 2024-04-09 23:22:38,026Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T040744/202011040407_202011040436.nc4 INFO 2024-04-09 23:22:38,056Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,123Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,186Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,247Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,307Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,367Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,427Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,488Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,550Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,612Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,678Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,741Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,803Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,864Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,925Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:38,987Z lrauvNc4ToNetcdf.py createSeries():299 time : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:39,033Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:39,037Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:39,042Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:39,046Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 76 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:39,051Z lrauvNc4ToNetcdf.py createSeries():299 platform_elevator_angle: 8 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:39,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:39,059Z lrauvNc4ToNetcdf.py createSeries():299 platform_rudder_angle: 8 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:39,064Z lrauvNc4ToNetcdf.py createSeries():299 platform_propeller_rotation_rate: 70 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:39,070Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_salinity: 25 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:39,076Z lrauvNc4ToNetcdf.py createSeries():299 sea_water_temperature: 25 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:39,081Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_salinity: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:39,085Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_salinity: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,089Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:39,090Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_sea_water_temperature: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:39,094Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_sea_water_temperature: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:39,099Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,106Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:39,108Z lrauvNc4ToNetcdf.py createSeries():299 mass_concentration_of_chlorophyll_in_sea_water: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:39,114Z lrauvNc4ToNetcdf.py createSeries():299 OutputChl: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:39,121Z lrauvNc4ToNetcdf.py createSeries():299 Output470: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:39,127Z lrauvNc4ToNetcdf.py createSeries():299 Output650: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:39,133Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg470nm: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:39,140Z lrauvNc4ToNetcdf.py createSeries():299 VolumeScatCoeff117deg650nm: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:39,146Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff470nm: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,150Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:39,151Z lrauvNc4ToNetcdf.py createSeries():299 ParticulateBackscatteringCoeff650nm: 54 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:39,156Z lrauvNc4ToNetcdf.py createSeries():299 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:39,161Z lrauvNc4ToNetcdf.py createSeries():299 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:39,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:39,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:39,182Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:39,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:39,188Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:39,197Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:39,207Z lrauvNc4ToNetcdf.py createSeries():299 depth : 148 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:39,242Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 146 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,286Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:39,306Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 146 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,351Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:39,371Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 146 v_t values found before 2020-11-04 04:07:00 and after 2020-11-04 04:36:00 INFO 2024-04-09 23:22:39,416Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:39,417Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T040744/202011040407_202011040436.nc4 INFO 2024-04-09 23:22:39,520Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 3675 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:39,617Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T040744/202011040407_202011040436.nc4 INFO 2024-04-09 23:22:39,617Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:39,618Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:39,619Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.374 0.0000006 0.0000466 913 6.15 0.88 1.40 2020-11-04 04:18:22.698290110 INFO 2024-04-09 23:22:39,622Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.380 0.0002193 -0.0000092 2721 18.33 -0.06 -0.09 2020-11-04 04:36:43.040916920 INFO 2024-04-09 23:22:39,624Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 40 0.26 - - INFO 2024-04-09 23:22:39,624Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 3674 INFO 2024-04-09 23:22:39,650Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T030755/20201104T053659/data.csv INFO 2024-04-09 23:22:39,748Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:39,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:40,215Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:40,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T040744/202011040407_202011040436_2S_scieng.nc INFO 2024-04-09 23:22:40,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011040407_202011040436.nc4 INFO 2024-04-09 23:22:41,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T043659/202011040436_202011041513.nc4 file... INFO 2024-04-09 23:22:41,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011040436_202011041513.nc4 INFO 2024-04-09 23:22:41,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T043659/202011040436_202011041513.nc4 INFO 2024-04-09 23:22:41,880Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,017Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,141Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,269Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,388Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,501Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,618Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,737Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,853Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:42,966Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,079Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,192Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,307Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,451Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,579Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,689Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:43,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:43,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:43,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:43,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:43,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:43,830Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:43,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:43,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:43,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:43,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:43,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:43,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:43,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:43,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:43,933Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:43,989Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:44,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:44,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:44,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:44,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:44,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:44,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:44,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:44,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:44,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:44,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:44,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:44,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:44,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:44,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:44,130Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:44,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:44,219Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:44,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:44,307Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:44,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:44,427Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 24 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:44,736Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:44,781Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 24 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:45,098Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:45,144Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 24 v_t values found before 2020-11-04 04:36:00 and after 2020-11-04 15:13:00 INFO 2024-04-09 23:22:45,458Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:45,459Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T043659/202011040436_202011041513.nc4 INFO 2024-04-09 23:22:45,697Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 94395 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:45,803Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 21 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T043659/202011040436_202011041513.nc4 INFO 2024-04-09 23:22:45,804Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:45,806Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 972 6.54 - - - INFO 2024-04-09 23:22:45,808Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 0.0000105 -0.0000200 819 5.51 -0.42 -0.67 2020-11-04 04:49:03.728636980 INFO 2024-04-09 23:22:45,812Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.373 0.0000086 0.0000092 169 1.13 0.94 1.50 2020-11-04 04:50:12.001349926 INFO 2024-04-09 23:22:45,815Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.403 0.0001465 0.0000085 2646 17.83 0.06 0.09 2020-11-04 05:08:02.448254108 INFO 2024-04-09 23:22:45,818Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.386 0.0000210 0.0000025 878 5.91 0.05 0.08 2020-11-04 05:13:57.334851027 INFO 2024-04-09 23:22:45,821Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.351 0.0000026 -0.0000003 835 5.62 -0.01 -0.01 2020-11-04 05:19:35.204566002 INFO 2024-04-09 23:22:45,825Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.361 0.0000324 0.0000172 168 1.14 1.76 2.80 2020-11-04 05:20:43.984920025 INFO 2024-04-09 23:22:45,828Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.422 0.0000010 -0.0000130 120 0.80 -1.89 -3.01 2020-11-04 05:21:32.448987961 INFO 2024-04-09 23:22:45,832Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.373 0.0000362 0.0000623 4934 33.22 0.22 0.35 2020-11-04 05:54:46.274211884 INFO 2024-04-09 23:22:45,836Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.340 0.0000325 -0.0000384 667 4.49 -0.99 -1.58 2020-11-04 05:59:15.884829044 INFO 2024-04-09 23:22:45,840Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.347 -0.0000108 -0.0000003 181 1.21 -0.03 -0.04 2020-11-04 06:00:29.108638048 INFO 2024-04-09 23:22:45,843Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.379 0.0000077 0.0000027 717 4.82 0.06 0.10 2020-11-04 06:05:18.830869913 INFO 2024-04-09 23:22:45,847Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.324 -0.0000078 -0.0000119 142 0.95 -1.45 -2.32 2020-11-04 06:06:16.362406015 INFO 2024-04-09 23:22:45,851Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.359 0.0000057 -0.0000000 12 0.07 -0.06 -0.10 2020-11-04 06:06:21.169265985 INFO 2024-04-09 23:22:45,854Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.358 0.0000043 -0.0000001 83 0.56 -0.01 -0.02 2020-11-04 06:06:55.105787039 INFO 2024-04-09 23:22:45,859Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.370 0.0004052 -0.0002845 28927 194.77 -0.17 -0.27 2020-11-04 09:21:41.945200920 INFO 2024-04-09 23:22:45,868Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.324 -0.0001645 0.0001676 394 2.82 6.82 11.01 2020-11-04 09:24:31.548302889 INFO 2024-04-09 23:22:45,872Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.380 -0.0279812 0.0264297 28824 194.08 15.58 25.23 2020-11-04 12:38:36.419985056 INFO 2024-04-09 23:22:45,880Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.473 -0.0001082 0.0006240 517 3.70 19.28 31.21 2020-11-04 12:42:19.100936890 INFO 2024-04-09 23:22:45,884Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.376 0.0080723 -0.0015888 20858 140.44 -1.31 -2.10 2020-11-04 15:02:45.870995998 INFO 2024-04-09 23:22:45,892Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.370 0.0000558 -0.0000366 899 6.14 -0.69 -1.11 2020-11-04 15:08:54.452096939 INFO 2024-04-09 23:22:45,895Z lrauvNc4ToNetcdf.py nudge_coords():871 21: - - - 632 4.25 - - INFO 2024-04-09 23:22:45,895Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 94394 INFO 2024-04-09 23:22:45,925Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T033659/20201104T161310/data.csv INFO 2024-04-09 23:22:46,024Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database WARNING 2024-04-09 23:22:46,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1379 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2024-04-09 23:22:46,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1380 Overwriting interpolated repeated values with time's index values INFO 2024-04-09 23:22:46,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:46,690Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:47,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T043659/202011040436_202011041513_2S_scieng.nc INFO 2024-04-09 23:22:47,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011040436_202011041513.nc4 INFO 2024-04-09 23:22:47,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T151312/202011041513_202011041627.nc4 file... INFO 2024-04-09 23:22:47,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041513_202011041627.nc4 INFO 2024-04-09 23:22:47,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T151312/202011041513_202011041627.nc4 INFO 2024-04-09 23:22:47,905Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:47,972Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,033Z lrauvNc4ToNetcdf.py createSeries():299 depth : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,095Z lrauvNc4ToNetcdf.py createSeries():299 time : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,156Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,215Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,274Z lrauvNc4ToNetcdf.py createSeries():299 depth : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,335Z lrauvNc4ToNetcdf.py createSeries():299 time : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,394Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,454Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,513Z lrauvNc4ToNetcdf.py createSeries():299 depth : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,575Z lrauvNc4ToNetcdf.py createSeries():299 time : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,638Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,705Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,768Z lrauvNc4ToNetcdf.py createSeries():299 depth : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,829Z lrauvNc4ToNetcdf.py createSeries():299 time : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:48,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:48,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:48,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:48,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:48,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:48,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:48,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:48,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:48,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:48,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:48,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:48,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:48,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:48,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:48,930Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:48,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:48,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:48,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:48,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:48,960Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:48,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:48,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:48,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:48,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:48,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:48,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:48,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:49,000Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:49,001Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:49,004Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:49,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:49,009Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:49,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:49,025Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:49,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:49,042Z lrauvNc4ToNetcdf.py createSeries():299 depth : 66 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:49,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:49,082Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 65 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:49,656Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:49,681Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 65 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:50,262Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:50,285Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 65 v_t values found before 2020-11-04 15:13:00 and after 2020-11-04 16:27:00 INFO 2024-04-09 23:22:50,855Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:50,856Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T151312/202011041513_202011041627.nc4 INFO 2024-04-09 23:22:50,978Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 10735 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:51,075Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 17 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T151312/202011041513_202011041627.nc4 INFO 2024-04-09 23:22:51,076Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:51,077Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:51,077Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.384 0.0000006 0.0000124 27 0.18 8.19 13.06 2020-11-04 15:15:06.048103094 INFO 2024-04-09 23:22:51,080Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.371 0.0000029 0.0000101 176 1.26 0.93 1.49 2020-11-04 15:16:22.280280113 INFO 2024-04-09 23:22:51,082Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.372 -0.0000071 -0.0000174 811 5.59 -0.36 -0.58 2020-11-04 15:21:57.855091095 INFO 2024-04-09 23:22:51,084Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.390 0.0000235 0.0000026 510 3.43 0.09 0.14 2020-11-04 15:25:24.033823967 INFO 2024-04-09 23:22:51,086Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.341 0.0000085 0.0000018 87 0.58 0.36 0.57 2020-11-04 15:25:59.274058104 INFO 2024-04-09 23:22:51,089Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.383 0.0000121 -0.0000058 698 4.69 -0.14 -0.23 2020-11-04 15:30:41.271903992 INFO 2024-04-09 23:22:51,091Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.378 0.0000351 -0.0000328 819 5.51 -0.69 -1.10 2020-11-04 15:36:12.280061960 INFO 2024-04-09 23:22:51,093Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.363 0.0000220 -0.0000023 825 5.55 -0.05 -0.08 2020-11-04 15:41:45.731237888 INFO 2024-04-09 23:22:51,095Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.383 0.0000292 0.0000023 825 5.55 0.05 0.08 2020-11-04 15:47:19.180094957 INFO 2024-04-09 23:22:51,098Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.382 0.0000435 -0.0000201 816 5.49 -0.43 -0.68 2020-11-04 15:52:48.908077002 INFO 2024-04-09 23:22:51,100Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.355 0.0000332 0.0000082 819 5.51 0.17 0.27 2020-11-04 15:58:19.808712006 INFO 2024-04-09 23:22:51,103Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.369 0.0000179 -0.0000098 819 5.51 -0.21 -0.33 2020-11-04 16:03:50.678236961 INFO 2024-04-09 23:22:51,105Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.379 0.0001386 -0.0001327 837 5.63 -2.74 -4.37 2020-11-04 16:09:28.924017906 INFO 2024-04-09 23:22:51,108Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.383 0.0012406 -0.0011575 817 5.50 -24.53 -39.03 2020-11-04 16:14:59.095901966 INFO 2024-04-09 23:22:51,110Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.381 0.0000528 -0.0002394 838 5.64 -4.94 -7.87 2020-11-04 16:20:37.852082014 INFO 2024-04-09 23:22:51,114Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.374 0.0000355 -0.0000051 818 5.50 -0.11 -0.17 2020-11-04 16:26:08.456697941 INFO 2024-04-09 23:22:51,117Z lrauvNc4ToNetcdf.py nudge_coords():871 17: - - - 192 1.29 - - INFO 2024-04-09 23:22:51,117Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 10734 INFO 2024-04-09 23:22:51,149Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T141321/20201104T172726/data.csv INFO 2024-04-09 23:22:51,246Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:51,251Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:51,773Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:52,319Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T151312/202011041513_202011041627_2S_scieng.nc INFO 2024-04-09 23:22:52,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041513_202011041627.nc4 INFO 2024-04-09 23:22:52,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T162728/202011041627_202011041655.nc4 file... INFO 2024-04-09 23:22:52,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041627_202011041655.nc4 INFO 2024-04-09 23:22:53,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T162728/202011041627_202011041655.nc4 INFO 2024-04-09 23:22:53,183Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,243Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,301Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,359Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,417Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,473Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,528Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,585Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,640Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,697Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,752Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,808Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,864Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,921Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:53,976Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,031Z lrauvNc4ToNetcdf.py createSeries():299 time : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:54,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:54,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:54,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:54,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:54,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:54,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:54,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:54,106Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:54,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:22:54,110Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:22:54,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:54,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:22:54,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:54,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:22:54,117Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:54,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:54,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:54,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:54,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:54,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:54,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:54,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:54,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:22:54,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:54,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:54,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:54,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:22:54,170Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:54,178Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:54,187Z lrauvNc4ToNetcdf.py createSeries():299 depth : 35 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:54,220Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 34 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,533Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:54,553Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 34 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:54,873Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:54,902Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 34 v_t values found before 2020-11-04 16:27:00 and after 2020-11-04 16:55:00 INFO 2024-04-09 23:22:55,221Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:55,222Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T162728/202011041627_202011041655.nc4 INFO 2024-04-09 23:22:55,324Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 3766 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:55,418Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 6 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T162728/202011041627_202011041655.nc4 INFO 2024-04-09 23:22:55,419Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:55,420Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:55,420Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.384 -0.0000264 -0.0000378 167 1.26 -3.49 -5.55 2020-11-04 16:30:50.624867916 INFO 2024-04-09 23:22:55,423Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.386 0.0000426 -0.0000519 803 5.43 -1.11 -1.77 2020-11-04 16:36:16.778068066 INFO 2024-04-09 23:22:55,425Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.374 0.0000465 -0.0000150 814 5.59 -0.31 -0.50 2020-11-04 16:41:52.856071949 INFO 2024-04-09 23:22:55,427Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.387 0.0000317 0.0000006 875 5.89 0.01 0.02 2020-11-04 16:47:46.532053947 INFO 2024-04-09 23:22:55,430Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.361 0.0000177 0.0000025 853 5.74 0.05 0.08 2020-11-04 16:53:31.376565933 INFO 2024-04-09 23:22:55,432Z lrauvNc4ToNetcdf.py nudge_coords():871 6: - - - 253 1.70 - - INFO 2024-04-09 23:22:55,432Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 3765 INFO 2024-04-09 23:22:55,456Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T152737/20201104T175513/data.csv INFO 2024-04-09 23:22:55,555Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:55,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:22:55,982Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:22:56,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T162728/202011041627_202011041655_2S_scieng.nc INFO 2024-04-09 23:22:56,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041627_202011041655.nc4 INFO 2024-04-09 23:22:56,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T165515/202011041655_202011041739.nc4 file... INFO 2024-04-09 23:22:56,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041655_202011041739.nc4 INFO 2024-04-09 23:22:57,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T165515/202011041655_202011041739.nc4 INFO 2024-04-09 23:22:57,178Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,240Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,301Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,363Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,422Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,481Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,540Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,600Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,661Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,720Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,780Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,840Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,900Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:57,963Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,023Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,083Z lrauvNc4ToNetcdf.py createSeries():299 time : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:22:58,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:22:58,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:22:58,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:22:58,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:22:58,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:22:58,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:22:58,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:22:58,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:22:58,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:22:58,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:22:58,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:22:58,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:22:58,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:22:58,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:22:58,189Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:22:58,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:22:58,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:22:58,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:22:58,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:22:58,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:22:58,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:22:58,237Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:22:58,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:22:58,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:58,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:22:58,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:22:58,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:22:58,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:22:58,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:58,275Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:58,285Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:58,296Z lrauvNc4ToNetcdf.py createSeries():299 depth : 36 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,304Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:22:58,334Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 35 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:58,677Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:58,701Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 35 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:59,047Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:59,068Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 35 v_t values found before 2020-11-04 16:55:00 and after 2020-11-04 17:39:00 INFO 2024-04-09 23:22:59,416Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:22:59,417Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T165515/202011041655_202011041739.nc4 INFO 2024-04-09 23:22:59,521Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 6172 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:22:59,619Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 5 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T165515/202011041655_202011041739.nc4 INFO 2024-04-09 23:22:59,620Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:22:59,621Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:22:59,622Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.382 0.0000442 -0.0000358 187 1.34 -3.11 -4.96 2020-11-04 16:58:32.738017082 INFO 2024-04-09 23:22:59,625Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.374 0.0000328 -0.0000321 1090 7.40 -0.51 -0.80 2020-11-04 17:05:56.945095062 INFO 2024-04-09 23:22:59,629Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.397 0.0000401 0.0000135 831 5.59 0.28 0.45 2020-11-04 17:11:32.911887884 INFO 2024-04-09 23:22:59,632Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.378 0.0001242 0.0000604 3246 21.86 0.32 0.51 2020-11-04 17:33:24.752167940 INFO 2024-04-09 23:22:59,635Z lrauvNc4ToNetcdf.py nudge_coords():871 5: - - - 817 5.81 - - INFO 2024-04-09 23:22:59,635Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 6171 INFO 2024-04-09 23:22:59,672Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T155524/20201104T183914/data.csv INFO 2024-04-09 23:22:59,768Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:22:59,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:00,449Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:01,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T165515/202011041655_202011041739_2S_scieng.nc INFO 2024-04-09 23:23:01,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041655_202011041739.nc4 INFO 2024-04-09 23:23:01,449Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T173914/202011041739_202011041813.nc4 file... INFO 2024-04-09 23:23:01,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041739_202011041813.nc4 INFO 2024-04-09 23:23:04,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T173914/202011041739_202011041813.nc4 INFO 2024-04-09 23:23:04,722Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:04,800Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:04,870Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:04,935Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:04,996Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,056Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,116Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,175Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,234Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,294Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,352Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,412Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,478Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,536Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,593Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,649Z lrauvNc4ToNetcdf.py createSeries():299 time : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:05,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:05,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:05,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:05,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:05,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:05,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:05,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:05,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:05,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:05,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:05,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:05,741Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:05,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:05,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:05,750Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:05,764Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:05,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:05,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:05,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:05,783Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:05,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:05,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:05,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:05,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:05,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:05,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:05,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:05,824Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:05,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:05,829Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:05,841Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:05,852Z lrauvNc4ToNetcdf.py createSeries():299 depth : 6 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:05,888Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 3 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,932Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:05,953Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 3 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:05,996Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:06,016Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 3 v_t values found before 2020-11-04 17:39:00 and after 2020-11-04 18:13:00 INFO 2024-04-09 23:23:06,059Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:06,060Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T173914/202011041739_202011041813.nc4 INFO 2024-04-09 23:23:06,160Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 5011 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:06,253Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T173914/202011041739_202011041813.nc4 INFO 2024-04-09 23:23:06,253Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:06,255Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 410 2.76 - - - INFO 2024-04-09 23:23:06,255Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.371 0.0000287 -0.0000088 853 5.74 -0.18 -0.28 2020-11-04 17:47:44.789305925 INFO 2024-04-09 23:23:06,258Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.383 0.0000287 -0.0000319 797 5.37 -0.69 -1.10 2020-11-04 17:53:07.560157061 INFO 2024-04-09 23:23:06,260Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.391 0.0000748 0.0000092 2448 16.48 0.07 0.10 2020-11-04 18:09:36.987900972 INFO 2024-04-09 23:23:06,263Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 502 3.41 - - INFO 2024-04-09 23:23:06,263Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 5010 INFO 2024-04-09 23:23:06,285Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T163914/20201104T191302/data.csv INFO 2024-04-09 23:23:06,388Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:06,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:06,650Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:06,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T173914/202011041739_202011041813_2S_scieng.nc INFO 2024-04-09 23:23:06,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041739_202011041813.nc4 INFO 2024-04-09 23:23:06,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T181302/202011041813_202011041831.nc4 file... INFO 2024-04-09 23:23:06,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041813_202011041831.nc4 INFO 2024-04-09 23:23:07,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T181302/202011041813_202011041831.nc4 INFO 2024-04-09 23:23:07,505Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,592Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,665Z lrauvNc4ToNetcdf.py createSeries():299 depth : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,737Z lrauvNc4ToNetcdf.py createSeries():299 time : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,809Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,881Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:07,952Z lrauvNc4ToNetcdf.py createSeries():299 depth : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,023Z lrauvNc4ToNetcdf.py createSeries():299 time : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,093Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,162Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,231Z lrauvNc4ToNetcdf.py createSeries():299 depth : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,301Z lrauvNc4ToNetcdf.py createSeries():299 time : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,370Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,440Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,510Z lrauvNc4ToNetcdf.py createSeries():299 depth : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,592Z lrauvNc4ToNetcdf.py createSeries():299 time : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,649Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:08,653Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,657Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:08,659Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:08,664Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:08,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:08,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:23:08,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:23:08,677Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:08,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:08,684Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:08,688Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:08,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:08,695Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:08,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:08,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:08,703Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,710Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:08,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:08,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:08,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:08,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:08,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:08,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:08,734Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:08,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:08,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:08,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:08,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:23:08,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:23:08,755Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,759Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:08,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:23:08,762Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:08,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:08,777Z lrauvNc4ToNetcdf.py createSeries():299 depth : 86 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:08,818Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 85 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,873Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:08,901Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 85 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:08,951Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:08,975Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 85 v_t values found before 2020-11-04 18:13:00 and after 2020-11-04 18:31:00 INFO 2024-04-09 23:23:09,026Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:09,027Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T181302/202011041813_202011041831.nc4 INFO 2024-04-09 23:23:09,151Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 2750 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:09,265Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T181302/202011041813_202011041831.nc4 INFO 2024-04-09 23:23:09,265Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:09,266Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 484 3.25 - - - INFO 2024-04-09 23:23:09,267Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.374 0.0000098 -0.0000007 432 2.92 -0.03 -0.04 2020-11-04 18:19:13.343990088 INFO 2024-04-09 23:23:09,270Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.381 0.0000486 0.0000063 962 6.47 0.11 0.18 2020-11-04 18:25:42.236099958 INFO 2024-04-09 23:23:09,272Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.373 0.0000239 -0.0000196 824 5.54 -0.41 -0.65 2020-11-04 18:31:15.331129074 INFO 2024-04-09 23:23:09,274Z lrauvNc4ToNetcdf.py nudge_coords():871 4: - - - 47 0.31 - - INFO 2024-04-09 23:23:09,274Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 2749 INFO 2024-04-09 23:23:09,302Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T171302/20201104T193134/data.csv INFO 2024-04-09 23:23:09,398Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:09,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:09,639Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:09,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T181302/202011041813_202011041831_2S_scieng.nc INFO 2024-04-09 23:23:09,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041813_202011041831.nc4 INFO 2024-04-09 23:23:10,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183136/202011041831_202011041837.nc4 file... INFO 2024-04-09 23:23:10,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041831_202011041837.nc4 INFO 2024-04-09 23:23:10,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183136/202011041831_202011041837.nc4 INFO 2024-04-09 23:23:10,458Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,518Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,579Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,662Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,721Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,785Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,842Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,903Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:10,963Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,023Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,082Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,143Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,204Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,263Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,321Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,381Z lrauvNc4ToNetcdf.py createSeries():299 time : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:11,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:11,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:11,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:11,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:11,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:11,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:11,449Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:11,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:11,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:23:11,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:23:11,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:23:11,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:23:11,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:23:11,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:23:11,463Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:11,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:11,474Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:11,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:11,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:11,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:11,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:11,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:23:11,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:23:11,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:23:11,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:23:11,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:11,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:23:11,505Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:11,510Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:11,515Z lrauvNc4ToNetcdf.py createSeries():299 depth : 47 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:11,546Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 45 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:11,986Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:12,008Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 45 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:12,446Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:12,467Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 45 v_t values found before 2020-11-04 18:31:00 and after 2020-11-04 18:37:00 INFO 2024-04-09 23:23:12,906Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:12,906Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183136/202011041831_202011041837.nc4 INFO 2024-04-09 23:23:13,006Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 574 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:13,104Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183136/202011041831_202011041837.nc4 INFO 2024-04-09 23:23:13,104Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:13,105Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:23:13,106Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.412 0.0000072 0.0000096 51 0.34 3.34 5.29 2020-11-04 18:33:29.912825108 INFO 2024-04-09 23:23:13,108Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.393 -0.0000147 -0.0000407 161 1.28 -3.72 -5.90 2020-11-04 18:34:46.935791016 INFO 2024-04-09 23:23:13,110Z lrauvNc4ToNetcdf.py nudge_coords():871 3: - - - 361 2.51 - - INFO 2024-04-09 23:23:13,110Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 573 INFO 2024-04-09 23:23:13,131Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T173145/20201104T193718/data.csv INFO 2024-04-09 23:23:13,228Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:13,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:13,458Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:13,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183136/202011041831_202011041837_2S_scieng.nc INFO 2024-04-09 23:23:13,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041831_202011041837.nc4 INFO 2024-04-09 23:23:14,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/202011041837_202011042040.nc4 file... INFO 2024-04-09 23:23:14,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011041837_202011042040.nc4 INFO 2024-04-09 23:23:14,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/202011041837_202011042040.nc4 INFO 2024-04-09 23:23:14,481Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,573Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,645Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,717Z lrauvNc4ToNetcdf.py createSeries():299 time : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,804Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,871Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:14,945Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,014Z lrauvNc4ToNetcdf.py createSeries():299 time : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,084Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,151Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,219Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,291Z lrauvNc4ToNetcdf.py createSeries():299 time : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,363Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,433Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,505Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,577Z lrauvNc4ToNetcdf.py createSeries():299 time : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:15,648Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:15,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:15,655Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:15,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:15,673Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:15,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:15,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:15,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:15,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:15,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:15,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:15,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:15,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:15,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:15,749Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:15,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:15,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:15,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:15,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:15,829Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:15,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:15,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:15,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:15,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:15,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:15,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:15,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:15,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:15,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:15,900Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:15,929Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:15,956Z lrauvNc4ToNetcdf.py createSeries():299 depth : 95 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:15,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:16,009Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 92 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:16,066Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:16,091Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 92 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:16,145Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:16,171Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 92 v_t values found before 2020-11-04 18:37:00 and after 2020-11-04 20:40:00 INFO 2024-04-09 23:23:16,229Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:16,230Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/202011041837_202011042040.nc4 INFO 2024-04-09 23:23:16,350Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 18099 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:16,451Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 9 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/202011041837_202011042040.nc4 INFO 2024-04-09 23:23:16,451Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:16,453Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 477 3.21 - - - INFO 2024-04-09 23:23:16,453Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.371 0.0000697 -0.0000104 1838 12.38 -0.10 -0.16 2020-11-04 18:52:54.608274937 INFO 2024-04-09 23:23:16,456Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.375 0.0000940 -0.0000017 2508 17.09 -0.01 -0.02 2020-11-04 19:10:00.499133110 INFO 2024-04-09 23:23:16,459Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.374 0.0000488 -0.0000286 1298 9.10 -0.37 -0.58 2020-11-04 19:19:07.125138044 INFO 2024-04-09 23:23:16,462Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.375 0.0000163 -0.0000266 819 5.51 -0.56 -0.89 2020-11-04 19:24:38.203927994 INFO 2024-04-09 23:23:16,465Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.366 0.0000207 -0.0000192 817 5.50 -0.41 -0.65 2020-11-04 19:30:08.425374031 INFO 2024-04-09 23:23:16,468Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.355 0.0000359 -0.0002192 4715 31.76 -0.81 -1.28 2020-11-04 20:01:54.264651060 INFO 2024-04-09 23:23:16,471Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.356 0.0000542 -0.0000159 547 4.09 -0.45 -0.72 2020-11-04 20:05:59.842803001 INFO 2024-04-09 23:23:16,474Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.385 0.0002521 -0.0001249 4369 29.42 -0.50 -0.79 2020-11-04 20:35:25.419863939 INFO 2024-04-09 23:23:16,477Z lrauvNc4ToNetcdf.py nudge_coords():871 9: - - - 710 5.20 - - INFO 2024-04-09 23:23:16,477Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 18098 INFO 2024-04-09 23:23:16,506Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T173719/20201104T214038/data.csv INFO 2024-04-09 23:23:16,602Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:16,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:16,989Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:17,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/202011041837_202011042040_2S_scieng.nc INFO 2024-04-09 23:23:17,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011041837_202011042040.nc4 INFO 2024-04-09 23:23:17,653Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/slate0000_202011041837_202011042040.nc4 file... INFO 2024-04-09 23:23:17,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_202011041837_202011042040.nc4 INFO 2024-04-09 23:23:18,077Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T183718/slate0000_202011041837_202011042040.nc4 ERROR 2024-04-09 23:23:18,077Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,078Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,078Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,078Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,078Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,079Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,079Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,079Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,079Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,080Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,080Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,080Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,080Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,081Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,081Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:18,081Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:23:18,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4 file... INFO 2024-04-09 23:23:18,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011042040_202011042045.nc4 INFO 2024-04-09 23:23:18,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4 INFO 2024-04-09 23:23:18,666Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:18,726Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:18,784Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:18,842Z lrauvNc4ToNetcdf.py createSeries():299 time : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:18,902Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:18,960Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,019Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,076Z lrauvNc4ToNetcdf.py createSeries():299 time : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,134Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,192Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,249Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,306Z lrauvNc4ToNetcdf.py createSeries():299 time : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,364Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,422Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,481Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,538Z lrauvNc4ToNetcdf.py createSeries():299 time : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:19,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:19,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:19,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:19,592Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_buoyancy_position empty so skipping INFO 2024-04-09 23:23:19,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_elevator_angle empty so skipping INFO 2024-04-09 23:23:19,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_mass_position empty so skipping INFO 2024-04-09 23:23:19,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_rudder_angle empty so skipping INFO 2024-04-09 23:23:19,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_propeller_rotation_rate empty so skipping INFO 2024-04-09 23:23:19,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-09 23:23:19,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-09 23:23:19,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-09 23:23:19,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-09 23:23:19,606Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-09 23:23:19,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-09 23:23:19,608Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,613Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:19,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:23:19,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-09 23:23:19,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-09 23:23:19,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-09 23:23:19,621Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-09 23:23:19,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-09 23:23:19,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:23:19,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-09 23:23:19,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping INFO 2024-04-09 23:23:19,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping INFO 2024-04-09 23:23:19,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:19,640Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:23:19,641Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,646Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:19,648Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:19,653Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:19,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:19,686Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:20,564Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:20,587Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:21,475Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:21,496Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 91 v_t values found before 2020-11-04 20:40:00 and after 2020-11-04 20:45:00 INFO 2024-04-09 23:23:22,337Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:22,338Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4 INFO 2024-04-09 23:23:22,440Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 739 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:22,551Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045.nc4 INFO 2024-04-09 23:23:22,551Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:22,553Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 561 3.78 - - - INFO 2024-04-09 23:23:22,554Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 177 1.18 - - INFO 2024-04-09 23:23:22,554Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 738 INFO 2024-04-09 23:23:22,582Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T194038/20201104T214537/data.csv INFO 2024-04-09 23:23:22,681Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:22,685Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'health_platform_average_current', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:22,889Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:23,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204038/202011042040_202011042045_2S_scieng.nc INFO 2024-04-09 23:23:23,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011042040_202011042045.nc4 INFO 2024-04-09 23:23:23,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204539/202011042045_202011042305.nc4 file... INFO 2024-04-09 23:23:23,610Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202011042045_202011042305.nc4 INFO 2024-04-09 23:23:24,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204539/202011042045_202011042305.nc4 INFO 2024-04-09 23:23:24,054Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,125Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,192Z lrauvNc4ToNetcdf.py createSeries():299 depth : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,259Z lrauvNc4ToNetcdf.py createSeries():299 time : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,325Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,387Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,451Z lrauvNc4ToNetcdf.py createSeries():299 depth : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,514Z lrauvNc4ToNetcdf.py createSeries():299 time : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,583Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,648Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,713Z lrauvNc4ToNetcdf.py createSeries():299 depth : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,777Z lrauvNc4ToNetcdf.py createSeries():299 time : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,842Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,904Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:24,968Z lrauvNc4ToNetcdf.py createSeries():299 depth : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,042Z lrauvNc4ToNetcdf.py createSeries():299 time : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:25,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:25,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:25,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:25,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:25,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:25,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:25,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:25,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:25,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:25,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:25,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:25,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:25,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:25,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:25,212Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:25,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:25,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:25,282Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:25,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:25,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:25,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:25,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:25,351Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:25,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:25,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:25,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:25,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:25,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:25,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:25,391Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:25,420Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:25,446Z lrauvNc4ToNetcdf.py createSeries():299 depth : 71 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:25,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:25,499Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 70 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:26,129Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:26,153Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 70 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:26,782Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:26,805Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 70 v_t values found before 2020-11-04 20:45:00 and after 2020-11-04 23:05:00 INFO 2024-04-09 23:23:27,432Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:27,433Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204539/202011042045_202011042305.nc4 INFO 2024-04-09 23:23:27,557Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 20007 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:27,656Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 9 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204539/202011042045_202011042305.nc4 INFO 2024-04-09 23:23:27,656Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:27,657Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:23:27,658Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.348 0.0000694 -0.0000310 389 2.66 -1.36 -2.16 2020-11-04 20:52:39.927439928 INFO 2024-04-09 23:23:27,661Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.377 0.0000177 0.0000085 502 3.38 0.29 0.47 2020-11-04 20:56:03.071948051 INFO 2024-04-09 23:23:27,663Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.376 0.0000907 -0.0000938 5645 38.01 -0.29 -0.46 2020-11-04 21:34:03.995311022 INFO 2024-04-09 23:23:27,667Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.396 -0.0000555 -0.0000003 804 5.58 -0.01 -0.01 2020-11-04 21:39:39.260225058 INFO 2024-04-09 23:23:27,670Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.385 0.0000911 -0.0002162 5802 39.06 -0.65 -1.03 2020-11-04 22:18:43.453222036 INFO 2024-04-09 23:23:27,674Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.379 0.0000835 -0.0000019 558 4.05 -0.05 -0.09 2020-11-04 22:22:46.691948891 INFO 2024-04-09 23:23:27,677Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.370 -0.0000872 -0.0003424 5912 39.81 -1.00 -1.59 2020-11-04 23:02:35.397458076 INFO 2024-04-09 23:23:27,681Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.360 -0.0000068 0.0000046 38 0.25 2.14 3.40 2020-11-04 23:02:50.756469965 INFO 2024-04-09 23:23:27,684Z lrauvNc4ToNetcdf.py nudge_coords():871 9: - - - 356 2.68 - - INFO 2024-04-09 23:23:27,684Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 20006 INFO 2024-04-09 23:23:27,710Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201104T194548/20201105T000532/data.csv INFO 2024-04-09 23:23:27,808Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:27,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:28,253Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:28,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201103_20201104/20201104T204539/202011042045_202011042305_2S_scieng.nc INFO 2024-04-09 23:23:28,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202011042045_202011042305.nc4 INFO 2024-04-09 23:23:29,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/202012072344_202012080416.nc4 file... INFO 2024-04-09 23:23:29,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012072344_202012080416.nc4 INFO 2024-04-09 23:23:29,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/202012072344_202012080416.nc4 INFO 2024-04-09 23:23:29,676Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:29,773Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:29,856Z lrauvNc4ToNetcdf.py createSeries():299 depth : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:29,939Z lrauvNc4ToNetcdf.py createSeries():299 time : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,023Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,104Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,182Z lrauvNc4ToNetcdf.py createSeries():299 depth : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,260Z lrauvNc4ToNetcdf.py createSeries():299 time : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,343Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,417Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,492Z lrauvNc4ToNetcdf.py createSeries():299 depth : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,567Z lrauvNc4ToNetcdf.py createSeries():299 time : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,644Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,721Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,797Z lrauvNc4ToNetcdf.py createSeries():299 depth : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,877Z lrauvNc4ToNetcdf.py createSeries():299 time : 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:30,946Z lrauvNc4ToNetcdf.py createSeries():299 time_fix : 1 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:30,952Z lrauvNc4ToNetcdf.py createSeries():299 latitude_fix: 1 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,956Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:30,957Z lrauvNc4ToNetcdf.py createSeries():299 longitude_fix: 1 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:30,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:30,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:30,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:30,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:31,003Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:31,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:31,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:31,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:31,064Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:31,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:31,077Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:31,084Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:31,090Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:31,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:31,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:31,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:31,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:31,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:31,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:31,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:31,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:31,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:31,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:31,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:31,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:31,355Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:31,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:31,368Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:31,414Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:31,460Z lrauvNc4ToNetcdf.py createSeries():299 depth : 67 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:31,535Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,610Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:31,647Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,722Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:31,758Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 68 v_t values found before 2020-12-07 23:44:00 and after 2020-12-08 04:16:00 INFO 2024-04-09 23:23:31,836Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:31,837Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/202012072344_202012080416.nc4 INFO 2024-04-09 23:23:31,988Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 40071 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:32,085Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 21 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/202012072344_202012080416.nc4 INFO 2024-04-09 23:23:32,086Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:32,087Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 947 6.48 - - - INFO 2024-04-09 23:23:32,088Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.365 0.0000016 -0.0000108 72 0.48 -2.48 -4.17 2020-12-07 23:51:15.762880087 INFO 2024-04-09 23:23:32,091Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.369 -0.0000066 -0.0000243 521 3.51 -0.76 -1.28 2020-12-07 23:54:46.869254112 INFO 2024-04-09 23:23:32,093Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.376 0.0000001 -0.0001113 2587 17.42 -0.70 -1.18 2020-12-08 00:12:12.243577003 INFO 2024-04-09 23:23:32,096Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.383 0.0001064 -0.0000061 827 5.57 -0.12 -0.20 2020-12-08 00:17:46.985445976 INFO 2024-04-09 23:23:32,098Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.358 0.0000079 -0.0000336 415 2.79 -1.32 -2.23 2020-12-08 00:20:34.966900110 INFO 2024-04-09 23:23:32,101Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.391 0.0003010 -0.0003845 7949 53.53 -0.78 -1.33 2020-12-08 01:14:07.388411999 INFO 2024-04-09 23:23:32,105Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.370 0.0000000 -0.0000080 899 6.05 -0.14 -0.24 2020-12-08 01:20:11.138734102 INFO 2024-04-09 23:23:32,108Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.357 0.0000149 -0.0000036 77 0.52 -0.76 -1.30 2020-12-08 01:20:42.726563931 INFO 2024-04-09 23:23:32,110Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.370 0.0000194 -0.0000029 782 5.37 -0.06 -0.10 2020-12-08 01:26:05.442662954 INFO 2024-04-09 23:23:32,114Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.378 -0.0006244 -0.0004632 8308 55.93 -0.90 -1.53 2020-12-08 02:22:01.922400951 INFO 2024-04-09 23:23:32,119Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.385 0.0000509 0.0000215 1042 7.34 0.32 0.54 2020-12-08 02:29:22.549099922 INFO 2024-04-09 23:23:32,122Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.318 0.0000186 -0.0000385 821 5.53 -0.76 -1.29 2020-12-08 02:34:54.533782004 INFO 2024-04-09 23:23:32,125Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.386 0.0000378 -0.0000000 1373 9.26 -0.00 -0.00 2020-12-08 02:44:10.230334044 INFO 2024-04-09 23:23:32,128Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.380 -0.0001865 0.0000662 3236 22.04 0.33 0.56 2020-12-08 03:06:12.815788031 INFO 2024-04-09 23:23:32,131Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.369 -0.0000564 -0.0000250 257 2.03 -1.34 -2.29 2020-12-08 03:08:14.738563061 INFO 2024-04-09 23:23:32,134Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.374 -0.0002096 -0.0001633 3313 22.31 -0.79 -1.36 2020-12-08 03:30:33.570373058 INFO 2024-04-09 23:23:32,137Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.363 0.0002952 -0.0000125 1095 8.03 -0.17 -0.29 2020-12-08 03:38:36.014673948 INFO 2024-04-09 23:23:32,140Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.391 -0.0004309 -0.0002636 3314 22.31 -1.29 -2.19 2020-12-08 04:00:55.158253908 INFO 2024-04-09 23:23:32,143Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.395 0.0000411 -0.0000985 1272 8.94 -1.20 -2.04 2020-12-08 04:09:52.186116934 INFO 2024-04-09 23:23:32,146Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.367 0.0000182 -0.0000052 920 6.28 -0.09 -0.15 2020-12-08 04:16:09.198571920 INFO 2024-04-09 23:23:32,149Z lrauvNc4ToNetcdf.py nudge_coords():871 21: - - - 43 0.31 - - INFO 2024-04-09 23:23:32,149Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 40070 INFO 2024-04-09 23:23:32,179Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201207T224418/20201208T051629/data.csv INFO 2024-04-09 23:23:32,277Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:32,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:32,796Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:33,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/202012072344_202012080416_2S_scieng.nc INFO 2024-04-09 23:23:33,243Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012072344_202012080416.nc4 INFO 2024-04-09 23:23:33,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/slate0000_199507280502_202012080416.nc4 file... INFO 2024-04-09 23:23:33,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/slate0000_199507280502_202012080416.nc4 INFO 2024-04-09 23:23:34,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201207T234418/slate0000_199507280502_202012080416.nc4 ERROR 2024-04-09 23:23:34,082Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,082Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,083Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,083Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,083Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,083Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,084Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,084Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,084Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,084Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,084Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,085Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,085Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord latitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,085Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord longitude: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,085Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord depth: time data 'slate0000' does not match format '%Y%m%d%H%M' ERROR 2024-04-09 23:23:34,086Z lrauvNc4ToNetcdf.py createCoord():590 Could not create coord time: time data 'slate0000' does not match format '%Y%m%d%H%M' INFO 2024-04-09 23:23:35,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201208T041629/202012080416_202012082337.nc4 file... INFO 2024-04-09 23:23:35,380Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202012080416_202012082337.nc4 INFO 2024-04-09 23:23:35,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201208T041629/202012080416_202012082337.nc4 INFO 2024-04-09 23:23:35,888Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,050Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,217Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,384Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,539Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,673Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,807Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:36,945Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,084Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,222Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,359Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,499Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,657Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,795Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:37,938Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:38,080Z lrauvNc4ToNetcdf.py createSeries():299 time : 52 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:38,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:38,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:38,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:38,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:38,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:38,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:38,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:38,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:38,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:38,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2024-04-09 23:23:38,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2024-04-09 23:23:38,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2024-04-09 23:23:38,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2024-04-09 23:23:38,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2024-04-09 23:23:38,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2024-04-09 23:23:38,639Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 52 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:38,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:38,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:38,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2024-04-09 23:23:38,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2024-04-09 23:23:39,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2024-04-09 23:23:39,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2024-04-09 23:23:39,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2024-04-09 23:23:39,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2024-04-09 23:23:39,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2024-04-09 23:23:39,337Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:39,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2024-04-09 23:23:39,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:39,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:39,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:39,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:39,412Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:39,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:39,557Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:39,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:39,702Z lrauvNc4ToNetcdf.py createSeries():299 depth : 53 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:39,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:39,879Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 51 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:40,035Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:40,102Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 51 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:40,315Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:40,372Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 51 v_t values found before 2020-12-08 04:16:00 and after 2020-12-08 23:37:00 INFO 2024-04-09 23:23:40,545Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:40,546Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201208T041629/202012080416_202012082337.nc4 INFO 2024-04-09 23:23:40,853Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 171202 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:40,975Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 75 longitude_fix and latititude_fix values from /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201208T041629/202012080416_202012082337.nc4 INFO 2024-04-09 23:23:40,976Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:40,978Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 71 0.64 - - - INFO 2024-04-09 23:23:40,981Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.391 0.0000026 0.0000132 261 2.01 0.72 1.22 2020-12-08 04:19:08.662194014 INFO 2024-04-09 23:23:40,985Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.370 0.0005359 0.0007707 6998 47.12 1.81 3.03 2020-12-08 05:06:16.070128918 INFO 2024-04-09 23:23:40,989Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.310 0.0000603 0.0000120 1178 8.20 0.16 0.27 2020-12-08 05:14:28.522696972 INFO 2024-04-09 23:23:40,993Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.380 0.0000747 -0.0000142 867 5.85 -0.27 -0.45 2020-12-08 05:20:19.948772907 INFO 2024-04-09 23:23:40,996Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.353 0.0001007 0.0000244 1252 8.43 0.32 0.54 2020-12-08 05:28:46.054868937 INFO 2024-04-09 23:23:41,000Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.365 0.0000654 -0.0000059 823 5.54 -0.12 -0.20 2020-12-08 05:34:18.714879036 INFO 2024-04-09 23:23:41,004Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.383 0.0000155 -0.0000149 91 0.61 -2.69 -4.50 2020-12-08 05:34:55.913472891 INFO 2024-04-09 23:23:41,008Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.335 0.0000508 -0.0000068 673 4.53 -0.17 -0.28 2020-12-08 05:39:28.326455116 INFO 2024-04-09 23:23:41,012Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.381 0.0004084 0.0003627 5017 33.78 1.18 1.99 2020-12-08 06:13:15.678611040 INFO 2024-04-09 23:23:41,016Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.390 0.0001631 0.0000479 565 4.04 1.30 2.20 2020-12-08 06:17:18.381143093 INFO 2024-04-09 23:23:41,020Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.409 0.0003307 0.0003514 4696 31.61 1.23 2.06 2020-12-08 06:48:55.630599022 INFO 2024-04-09 23:23:41,024Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.333 -0.0000164 -0.0001859 282 2.13 -9.63 -16.15 2020-12-08 06:51:04.082340956 INFO 2024-04-09 23:23:41,029Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.365 0.0002765 0.0002114 4807 32.36 0.72 1.21 2020-12-08 07:23:26.182578087 INFO 2024-04-09 23:23:41,033Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.393 0.0000758 0.0000027 434 3.23 0.09 0.15 2020-12-08 07:26:40.522491932 INFO 2024-04-09 23:23:41,037Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.383 0.0004560 0.0007248 4914 33.08 2.41 4.06 2020-12-08 07:59:45.827712059 INFO 2024-04-09 23:23:41,041Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.372 0.0000613 -0.0007177 433 3.12 -25.28 -42.61 2020-12-08 08:02:53.493696928 INFO 2024-04-09 23:23:41,045Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.365 0.0002242 -0.0000710 4900 32.99 -0.24 -0.40 2020-12-08 08:35:53.178556919 INFO 2024-04-09 23:23:41,049Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.366 0.0000243 -0.0000628 297 2.25 -3.09 -5.17 2020-12-08 08:38:08.607507944 INFO 2024-04-09 23:23:41,053Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.368 0.0001563 -0.0004325 5232 35.22 -1.35 -2.28 2020-12-08 09:13:22.463603973 INFO 2024-04-09 23:23:41,057Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.385 0.0000378 0.0000095 172 1.36 0.77 1.29 2020-12-08 09:14:44.300314903 INFO 2024-04-09 23:23:41,060Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.363 -0.0001752 -0.0003517 4963 33.41 -1.16 -1.95 2020-12-08 09:48:09.433979034 INFO 2024-04-09 23:23:41,064Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.388 0.0001502 0.0000498 326 2.42 2.26 3.81 2020-12-08 09:50:34.806185961 INFO 2024-04-09 23:23:41,068Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.364 -0.0001812 -0.0002801 5083 34.22 -0.91 -1.52 2020-12-08 10:24:48.446692944 INFO 2024-04-09 23:23:41,072Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.362 0.0000931 -0.0000896 375 2.81 -3.52 -5.91 2020-12-08 10:27:37.466777086 INFO 2024-04-09 23:23:41,076Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.365 0.0000236 -0.0004560 4619 31.10 -1.62 -2.72 2020-12-08 10:58:43.578608990 INFO 2024-04-09 23:23:41,080Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.378 -0.0000191 0.0000705 383 2.82 2.76 4.63 2020-12-08 11:01:33.143600941 INFO 2024-04-09 23:23:41,083Z lrauvNc4ToNetcdf.py nudge_coords():840 26: 0.377 -0.0000964 -0.0003656 4867 32.77 -1.23 -2.07 2020-12-08 11:34:19.599621058 INFO 2024-04-09 23:23:41,087Z lrauvNc4ToNetcdf.py nudge_coords():840 27: 0.368 0.0000026 -0.0000101 391 2.97 -0.37 -0.63 2020-12-08 11:37:17.998601913 INFO 2024-04-09 23:23:41,091Z lrauvNc4ToNetcdf.py nudge_coords():840 28: 0.369 -0.0006173 -0.0001857 4782 32.19 -0.64 -1.07 2020-12-08 12:09:30.022583008 INFO 2024-04-09 23:23:41,095Z lrauvNc4ToNetcdf.py nudge_coords():840 29: 0.375 0.0004027 -0.0001297 397 2.91 -4.93 -8.26 2020-12-08 12:12:24.993482113 INFO 2024-04-09 23:23:41,099Z lrauvNc4ToNetcdf.py nudge_coords():840 30: 0.370 -0.0003891 -0.0006243 5023 33.82 -2.03 -3.42 2020-12-08 12:46:14.431509972 INFO 2024-04-09 23:23:41,103Z lrauvNc4ToNetcdf.py nudge_coords():840 31: 0.374 -0.0000256 0.0000115 159 1.26 1.00 1.68 2020-12-08 12:47:30.634500980 INFO 2024-04-09 23:23:41,107Z lrauvNc4ToNetcdf.py nudge_coords():840 32: 0.394 -0.0000067 -0.0004114 5176 34.85 -1.30 -2.19 2020-12-08 13:22:21.774305105 INFO 2024-04-09 23:23:41,111Z lrauvNc4ToNetcdf.py nudge_coords():840 33: 0.361 0.0002310 -0.0000473 438 3.21 -1.63 -2.73 2020-12-08 13:25:34.658586025 INFO 2024-04-09 23:23:41,114Z lrauvNc4ToNetcdf.py nudge_coords():840 34: 0.392 -0.0001162 -0.0000001 5403 36.39 -0.00 -0.00 2020-12-08 14:01:58.146106958 INFO 2024-04-09 23:23:41,118Z lrauvNc4ToNetcdf.py nudge_coords():840 35: 0.374 -0.0000051 -0.0000186 134 0.93 -2.21 -3.70 2020-12-08 14:02:54.401424885 INFO 2024-04-09 23:23:41,122Z lrauvNc4ToNetcdf.py nudge_coords():840 36: 0.380 0.0000444 -0.0002026 5000 33.66 -0.66 -1.12 2020-12-08 14:36:34.442388058 INFO 2024-04-09 23:23:41,126Z lrauvNc4ToNetcdf.py nudge_coords():840 37: 0.387 -0.0001132 0.0000359 456 3.35 1.18 1.99 2020-12-08 14:39:55.724008083 INFO 2024-04-09 23:23:41,130Z lrauvNc4ToNetcdf.py nudge_coords():840 38: 0.355 0.0000659 0.0004334 4494 30.25 1.59 2.65 2020-12-08 15:10:11.413151026 INFO 2024-04-09 23:23:41,133Z lrauvNc4ToNetcdf.py nudge_coords():840 39: 0.376 0.0000064 0.0000278 218 1.64 1.88 3.15 2020-12-08 15:11:49.978573084 INFO 2024-04-09 23:23:41,137Z lrauvNc4ToNetcdf.py nudge_coords():840 40: 0.342 0.0001655 0.0004139 5161 34.75 1.31 2.21 2020-12-08 15:46:35.170126915 INFO 2024-04-09 23:23:41,141Z lrauvNc4ToNetcdf.py nudge_coords():840 41: 0.360 -0.0001633 -0.0000716 104 0.85 -9.26 -15.60 2020-12-08 15:47:26.556752920 INFO 2024-04-09 23:23:41,145Z lrauvNc4ToNetcdf.py nudge_coords():840 42: 0.380 -0.0000373 0.0000480 634 4.61 1.15 1.93 2020-12-08 15:52:03.568480015 INFO 2024-04-09 23:23:41,149Z lrauvNc4ToNetcdf.py nudge_coords():840 43: 0.369 0.0010599 0.0012168 9523 64.12 2.06 3.52 2020-12-08 16:56:11.314614058 INFO 2024-04-09 23:23:41,154Z lrauvNc4ToNetcdf.py nudge_coords():840 44: 0.355 0.0002015 -0.0000501 641 4.65 -1.17 -2.00 2020-12-08 17:00:50.481204033 INFO 2024-04-09 23:23:41,158Z lrauvNc4ToNetcdf.py nudge_coords():840 45: 0.350 0.0011830 0.0014473 10410 70.09 2.22 3.83 2020-12-08 18:10:56.287664890 INFO 2024-04-09 23:23:41,163Z lrauvNc4ToNetcdf.py nudge_coords():840 46: 0.376 0.0000866 0.0000870 1245 8.92 1.05 1.81 2020-12-08 18:19:51.905348063 INFO 2024-04-09 23:23:41,167Z lrauvNc4ToNetcdf.py nudge_coords():840 47: 0.376 0.0006147 0.0004074 4160 28.00 1.55 2.70 2020-12-08 18:47:52.590581894 INFO 2024-04-09 23:23:41,172Z lrauvNc4ToNetcdf.py nudge_coords():840 48: 0.373 0.0000777 -0.0000033 1173 8.15 -0.04 -0.08 2020-12-08 18:56:01.885555983 INFO 2024-04-09 23:23:41,175Z lrauvNc4ToNetcdf.py nudge_coords():840 49: 0.369 0.0000441 0.0000114 229 1.75 0.70 1.21 2020-12-08 18:57:47.391597033 INFO 2024-04-09 23:23:41,180Z lrauvNc4ToNetcdf.py nudge_coords():840 50: 0.397 0.0000099 -0.0000111 104 0.72 -1.65 -2.85 2020-12-08 18:58:31.120033026 INFO 2024-04-09 23:23:41,184Z lrauvNc4ToNetcdf.py nudge_coords():840 51: 0.375 0.0020580 0.0003715 5382 36.46 1.08 1.89 2020-12-08 19:34:59.057368994 INFO 2024-04-09 23:23:41,188Z lrauvNc4ToNetcdf.py nudge_coords():840 52: 0.368 0.0000336 0.0000081 443 3.16 0.27 0.48 2020-12-08 19:38:09.233819962 INFO 2024-04-09 23:23:41,193Z lrauvNc4ToNetcdf.py nudge_coords():840 53: 0.370 0.0002558 0.0000425 3545 23.86 0.19 0.33 2020-12-08 20:02:01.410475016 INFO 2024-04-09 23:23:41,197Z lrauvNc4ToNetcdf.py nudge_coords():840 54: 0.370 -0.0003100 0.0000299 852 5.83 0.54 0.95 2020-12-08 20:07:51.605464935 INFO 2024-04-09 23:23:41,201Z lrauvNc4ToNetcdf.py nudge_coords():840 55: 0.370 0.0001094 0.0000091 1179 8.03 0.12 0.21 2020-12-08 20:15:53.578388929 INFO 2024-04-09 23:23:41,206Z lrauvNc4ToNetcdf.py nudge_coords():840 56: 0.355 0.0006641 -0.0019361 4849 32.76 -6.15 -10.95 2020-12-08 20:48:39.826786041 INFO 2024-04-09 23:23:41,210Z lrauvNc4ToNetcdf.py nudge_coords():840 57: 0.355 0.0000566 -0.0000534 264 1.98 -2.81 -5.00 2020-12-08 20:50:38.940129042 INFO 2024-04-09 23:23:41,214Z lrauvNc4ToNetcdf.py nudge_coords():840 58: 0.366 0.0003339 -0.0020662 5114 34.43 -6.15 -11.12 2020-12-08 21:25:05.018513918 INFO 2024-04-09 23:23:41,218Z lrauvNc4ToNetcdf.py nudge_coords():840 59: 0.378 0.0000288 -0.0000157 164 1.23 -1.31 -2.36 2020-12-08 21:26:19.131413937 INFO 2024-04-09 23:23:41,223Z lrauvNc4ToNetcdf.py nudge_coords():840 60: 0.364 0.0010209 -0.0011093 4727 31.82 -3.52 -6.46 2020-12-08 21:58:08.858578920 INFO 2024-04-09 23:23:41,227Z lrauvNc4ToNetcdf.py nudge_coords():840 61: 0.350 -0.0030739 -0.0007186 1236 8.40 -8.61 -15.85 2020-12-08 22:06:33.265125989 INFO 2024-04-09 23:23:41,231Z lrauvNc4ToNetcdf.py nudge_coords():840 62: 0.380 -0.0005493 0.0000146 2073 13.95 0.10 0.19 2020-12-08 22:20:30.724351883 INFO 2024-04-09 23:23:41,235Z lrauvNc4ToNetcdf.py nudge_coords():840 63: 0.365 -0.0000873 -0.0001584 393 2.84 -5.59 -10.35 2020-12-08 22:23:21.324763060 INFO 2024-04-09 23:23:41,239Z lrauvNc4ToNetcdf.py nudge_coords():840 64: 0.373 -0.0000213 -0.0000222 41 0.27 -8.26 -15.28 2020-12-08 22:23:37.878391981 INFO 2024-04-09 23:23:41,243Z lrauvNc4ToNetcdf.py nudge_coords():840 65: 0.353 -0.0006875 -0.0011701 819 5.51 -21.25 -39.35 2020-12-08 22:29:08.913302898 INFO 2024-04-09 23:23:41,247Z lrauvNc4ToNetcdf.py nudge_coords():840 66: 0.379 -0.0019991 -0.0007052 1532 10.32 -6.83 -12.67 2020-12-08 22:39:28.317161083 INFO 2024-04-09 23:23:41,252Z lrauvNc4ToNetcdf.py nudge_coords():840 67: 0.400 0.0001608 -0.0001871 632 4.25 -4.40 -8.16 2020-12-08 22:43:43.682373047 INFO 2024-04-09 23:23:41,256Z lrauvNc4ToNetcdf.py nudge_coords():840 68: 0.375 -0.0002785 -0.0003746 669 4.51 -8.30 -15.41 2020-12-08 22:48:14.423670053 INFO 2024-04-09 23:23:41,259Z lrauvNc4ToNetcdf.py nudge_coords():840 69: 0.363 -0.0001299 -0.0005039 3566 24.01 -2.10 -3.89 2020-12-08 23:12:15.346757889 INFO 2024-04-09 23:23:41,263Z lrauvNc4ToNetcdf.py nudge_coords():840 70: 0.371 0.0003364 -0.0005068 38 0.25 -203.47 -376.76 2020-12-08 23:12:30.702342987 INFO 2024-04-09 23:23:41,268Z lrauvNc4ToNetcdf.py nudge_coords():840 71: 0.375 -0.0005297 -0.0000007 1235 8.56 -0.01 -0.02 2020-12-08 23:21:04.834228039 INFO 2024-04-09 23:23:41,272Z lrauvNc4ToNetcdf.py nudge_coords():840 72: 0.385 -0.0005255 -0.0001219 818 5.50 -2.21 -4.10 2020-12-08 23:26:35.505286931 INFO 2024-04-09 23:23:41,276Z lrauvNc4ToNetcdf.py nudge_coords():840 73: 0.367 0.0019016 -0.0011298 1260 8.48 -13.26 -24.68 2020-12-08 23:35:04.902848959 INFO 2024-04-09 23:23:41,280Z lrauvNc4ToNetcdf.py nudge_coords():871 75: - - - 336 2.26 - - INFO 2024-04-09 23:23:41,281Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 171201 INFO 2024-04-09 23:23:41,311Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20201208T031629/20201209T003720/data.csv INFO 2024-04-09 23:23:41,414Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:41,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'salinity', 'temperature', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:42,157Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:42,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/tethys/missionlogs/2020/20201207_20201208/20201208T041629/202012080416_202012082337_2S_scieng.nc INFO 2024-04-09 23:23:42,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202012080416_202012082337.nc4 INFO 2024-04-09 23:23:53,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T015901/202002070159_202002070500.nc4 file... INFO 2024-04-09 23:23:53,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202002070159_202002070500.nc4 INFO 2024-04-09 23:23:54,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T015901/202002070159_202002070500.nc4 INFO 2024-04-09 23:23:54,050Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,133Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,215Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,296Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,373Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,449Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,524Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,602Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,676Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,752Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,828Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,910Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:54,987Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,063Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,138Z lrauvNc4ToNetcdf.py createSeries():299 depth : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,215Z lrauvNc4ToNetcdf.py createSeries():299 time : 74 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:55,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:55,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:55,292Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:55,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:55,308Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:55,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:55,318Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,348Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:55,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:55,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:55,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2024-04-09 23:23:55,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:55,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable BackscatteringCoeff700nm empty so skipping INFO 2024-04-09 23:23:55,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2024-04-09 23:23:55,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2024-04-09 23:23:55,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:55,432Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:55,467Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:55,502Z lrauvNc4ToNetcdf.py createSeries():299 depth : 75 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:55,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:55,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:55,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:55,591Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 72 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,656Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:55,688Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 72 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,752Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:55,782Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 72 v_t values found before 2020-02-07 01:59:00 and after 2020-02-07 05:00:00 INFO 2024-04-09 23:23:55,844Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:55,845Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T015901/202002070159_202002070500.nc4 INFO 2024-04-09 23:23:55,982Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 26905 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:56,088Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 27 longitude_fix and latititude_fix values from /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T015901/202002070159_202002070500.nc4 INFO 2024-04-09 23:23:56,088Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:56,090Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 2 0.01 - - - INFO 2024-04-09 23:23:56,091Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.368 0.0000225 -0.0000106 290 1.95 0.76 -1.01 2020-02-07 02:00:59.194097996 INFO 2024-04-09 23:23:56,093Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.355 0.0000050 -0.0000161 138 0.92 2.46 -3.24 2020-02-07 02:01:55.011650085 INFO 2024-04-09 23:23:56,096Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.347 -0.0007612 -0.0008454 3040 20.47 5.79 -7.65 2020-02-07 02:22:23.613568068 INFO 2024-04-09 23:23:56,099Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.311 0.0000089 -0.0000825 579 3.89 2.97 -3.93 2020-02-07 02:26:17.596909046 INFO 2024-04-09 23:23:56,101Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.366 -0.0004548 -0.0003570 2963 19.95 2.50 -3.32 2020-02-07 02:46:14.974091053 INFO 2024-04-09 23:23:56,104Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.314 0.0000198 -0.0000884 1117 7.52 1.64 -2.18 2020-02-07 02:53:46.347209930 INFO 2024-04-09 23:23:56,107Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.328 -0.0000037 0.0000110 47 0.32 -4.89 6.49 2020-02-07 02:54:05.601895094 INFO 2024-04-09 23:23:56,110Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.352 -0.0000136 -0.0000215 192 1.29 2.32 -3.08 2020-02-07 02:55:23.694484949 INFO 2024-04-09 23:23:56,113Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.365 -0.0000871 -0.0001046 4588 31.11 0.47 -0.62 2020-02-07 03:26:30.394577026 INFO 2024-04-09 23:23:56,116Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.348 0.0000173 -0.0000168 506 3.40 0.69 -0.91 2020-02-07 03:29:54.826689959 INFO 2024-04-09 23:23:56,119Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.355 0.0000034 0.0000081 150 1.00 -1.12 1.49 2020-02-07 03:30:55.439519882 INFO 2024-04-09 23:23:56,122Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.364 -0.0000129 -0.0000403 828 5.57 1.01 -1.34 2020-02-07 03:36:29.974288940 INFO 2024-04-09 23:23:56,124Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.356 0.0000081 -0.0000345 873 5.87 0.82 -1.09 2020-02-07 03:42:22.710457087 INFO 2024-04-09 23:23:56,128Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.351 -0.0006687 -0.0021169 8196 55.24 5.39 -7.10 2020-02-07 04:37:37.729450941 INFO 2024-04-09 23:23:56,134Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.352 -0.0000345 -0.0000122 1241 8.35 0.21 -0.27 2020-02-07 04:45:59.130574942 INFO 2024-04-09 23:23:56,137Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.385 0.0000231 -0.0000167 394 2.65 0.89 -1.17 2020-02-07 04:48:38.333903074 INFO 2024-04-09 23:23:56,141Z lrauvNc4ToNetcdf.py nudge_coords():840 16: 0.293 0.0000014 -0.0000078 58 0.38 2.87 -3.77 2020-02-07 04:49:01.858124971 INFO 2024-04-09 23:23:56,144Z lrauvNc4ToNetcdf.py nudge_coords():840 17: 0.352 0.0000018 -0.0000015 7 0.04 5.13 -6.75 2020-02-07 04:49:04.618494987 INFO 2024-04-09 23:23:56,146Z lrauvNc4ToNetcdf.py nudge_coords():840 18: 0.364 -0.0000015 -0.0000016 7 0.04 5.56 -7.32 2020-02-07 04:49:07.438287973 INFO 2024-04-09 23:23:56,150Z lrauvNc4ToNetcdf.py nudge_coords():840 19: 0.372 -0.0000001 0.0000011 8 0.05 -3.17 4.18 2020-02-07 04:49:10.669394016 INFO 2024-04-09 23:23:56,152Z lrauvNc4ToNetcdf.py nudge_coords():840 20: 0.363 -0.0000021 -0.0000005 7 0.04 1.87 -2.47 2020-02-07 04:49:13.493168116 INFO 2024-04-09 23:23:56,155Z lrauvNc4ToNetcdf.py nudge_coords():840 21: 0.362 -0.0000000 -0.0000012 8 0.05 3.62 -4.77 2020-02-07 04:49:16.726396084 INFO 2024-04-09 23:23:56,158Z lrauvNc4ToNetcdf.py nudge_coords():840 22: 0.358 -0.0000006 -0.0000004 7 0.04 1.34 -1.76 2020-02-07 04:49:19.558455944 INFO 2024-04-09 23:23:56,161Z lrauvNc4ToNetcdf.py nudge_coords():840 23: 0.322 -0.0000002 -0.0000007 8 0.05 2.06 -2.72 2020-02-07 04:49:22.836467981 INFO 2024-04-09 23:23:56,164Z lrauvNc4ToNetcdf.py nudge_coords():840 24: 0.361 0.0000078 -0.0000132 331 2.22 0.84 -1.10 2020-02-07 04:51:36.517386912 INFO 2024-04-09 23:23:56,167Z lrauvNc4ToNetcdf.py nudge_coords():840 25: 0.340 0.0000117 -0.0000067 931 6.26 0.15 -0.20 2020-02-07 04:57:52.772659063 INFO 2024-04-09 23:23:56,170Z lrauvNc4ToNetcdf.py nudge_coords():871 27: - - - 388 2.61 - - INFO 2024-04-09 23:23:56,170Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 26904 INFO 2024-04-09 23:23:56,204Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20200207T005901/20200207T060029/data.csv INFO 2024-04-09 23:23:56,305Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:56,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:56,589Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:56,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T015901/202002070159_202002070500_2S_scieng.nc INFO 2024-04-09 23:23:56,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202002070159_202002070500.nc4 INFO 2024-04-09 23:23:56,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T050032/202002070500_202002070512.nc4 file... INFO 2024-04-09 23:23:56,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202002070500_202002070512.nc4 INFO 2024-04-09 23:23:57,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T050032/202002070500_202002070512.nc4 INFO 2024-04-09 23:23:57,534Z lrauvNc4ToNetcdf.py createSeries():299 depth : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:57,595Z lrauvNc4ToNetcdf.py createSeries():299 time : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:57,727Z lrauvNc4ToNetcdf.py createSeries():299 depth : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:57,784Z lrauvNc4ToNetcdf.py createSeries():299 time : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:57,912Z lrauvNc4ToNetcdf.py createSeries():299 depth : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:57,968Z lrauvNc4ToNetcdf.py createSeries():299 time : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,095Z lrauvNc4ToNetcdf.py createSeries():299 depth : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,153Z lrauvNc4ToNetcdf.py createSeries():299 time : 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:23:58,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-09 23:23:58,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-09 23:23:58,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-09 23:23:58,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:23:58,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:23:58,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:23:58,216Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 105 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:23:58,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:23:58,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:23:58,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2024-04-09 23:23:58,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:23:58,236Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable BackscatteringCoeff700nm empty so skipping INFO 2024-04-09 23:23:58,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2024-04-09 23:23:58,242Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2024-04-09 23:23:58,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:23:58,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:58,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:58,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:23:58,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:23:58,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:23:58,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:23:58,297Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 103 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,339Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:58,358Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 103 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,399Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:58,418Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 103 v_t values found before 2020-02-07 05:00:00 and after 2020-02-07 05:12:00 INFO 2024-04-09 23:23:58,459Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:23:58,460Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T050032/202002070500_202002070512.nc4 INFO 2024-04-09 23:23:58,551Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 1 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:23:58,643Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 2 longitude_fix and latititude_fix values from /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T050032/202002070500_202002070512.nc4 INFO 2024-04-09 23:23:58,644Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:23:58,644Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:23:58,645Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 0 0.00 - - INFO 2024-04-09 23:23:58,645Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 0 INFO 2024-04-09 23:23:58,664Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20200207T040045/20200207T061242/data.csv INFO 2024-04-09 23:23:58,768Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:23:58,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:23:59,014Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:23:59,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T050032/202002070500_202002070512_2S_scieng.nc INFO 2024-04-09 23:23:59,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202002070500_202002070512.nc4 INFO 2024-04-09 23:23:59,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T051244/202002070512_202002071208.nc4 file... INFO 2024-04-09 23:23:59,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202002070512_202002071208.nc4 INFO 2024-04-09 23:24:00,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T051244/202002070512_202002071208.nc4 INFO 2024-04-09 23:24:00,468Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:00,560Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:00,660Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:00,763Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:00,855Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:00,943Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,036Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,144Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,254Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,366Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,478Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,572Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,691Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,809Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,897Z lrauvNc4ToNetcdf.py createSeries():299 depth : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:01,980Z lrauvNc4ToNetcdf.py createSeries():299 time : 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:24:02,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:24:02,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:24:02,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:24:02,060Z lrauvNc4ToNetcdf.py createSeries():299 platform_buoyancy_position: 1 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,067Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:24:02,072Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:24:02,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:24:02,086Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 125 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:24:02,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:24:02,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:24:02,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2024-04-09 23:24:02,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:24:02,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable BackscatteringCoeff700nm empty so skipping INFO 2024-04-09 23:24:02,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2024-04-09 23:24:02,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2024-04-09 23:24:02,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:24:02,218Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:02,281Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:02,344Z lrauvNc4ToNetcdf.py createSeries():299 depth : 124 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:02,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:24:02,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:24:02,424Z lrauvNc4ToNetcdf.py createSeries():299 platform_average_current: 1 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:02,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:24:02,466Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 122 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:03,555Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:03,593Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 122 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:04,753Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:04,795Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 122 v_t values found before 2020-02-07 05:12:00 and after 2020-02-07 12:08:00 INFO 2024-04-09 23:24:05,918Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:05,920Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T051244/202002070512_202002071208.nc4 INFO 2024-04-09 23:24:06,093Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 59125 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:24:06,188Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 1 longitude_fix and latititude_fix values from /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T051244/202002070512_202002071208.nc4 INFO 2024-04-09 23:24:06,188Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-09 23:24:06,190Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-09 23:24:06,193Z lrauvNc4ToNetcdf.py nudge_coords():871 1: - - - 59124 415.81 - - INFO 2024-04-09 23:24:06,193Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 59124 INFO 2024-04-09 23:24:06,215Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20200207T041257/20200207T130850/data.csv INFO 2024-04-09 23:24:06,317Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:24:06,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:24:06,656Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:24:06,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T051244/202002070512_202002071208_2S_scieng.nc INFO 2024-04-09 23:24:06,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202002070512_202002071208.nc4 INFO 2024-04-09 23:24:07,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T120850/202002071208_202002071506.nc4 file... INFO 2024-04-09 23:24:07,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202002071208_202002071506.nc4 INFO 2024-04-09 23:24:07,849Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T120850/202002071208_202002071506.nc4 INFO 2024-04-09 23:24:07,882Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:07,967Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,045Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,121Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,195Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,268Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,339Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,411Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,484Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,557Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,629Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,701Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,770Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,839Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,910Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:08,981Z lrauvNc4ToNetcdf.py createSeries():299 time : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-09 23:24:09,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable time_fix empty so skipping INFO 2024-04-09 23:24:09,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable latitude_fix empty so skipping INFO 2024-04-09 23:24:09,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable longitude_fix empty so skipping INFO 2024-04-09 23:24:09,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-09 23:24:09,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-09 23:24:09,057Z lrauvNc4ToNetcdf.py createSeries():299 platform_mass_position: 10 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-09 23:24:09,067Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-09 23:24:09,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-09 23:24:09,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2024-04-09 23:24:09,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2024-04-09 23:24:09,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2024-04-09 23:24:09,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable BackscatteringCoeff700nm empty so skipping INFO 2024-04-09 23:24:09,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2024-04-09 23:24:09,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2024-04-09 23:24:09,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2024-04-09 23:24:09,132Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:09,166Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:09,200Z lrauvNc4ToNetcdf.py createSeries():299 depth : 26 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-09 23:24:09,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2024-04-09 23:24:09,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2024-04-09 23:24:09,252Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-09 23:24:09,283Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 25 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,341Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:09,372Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 25 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,430Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:09,461Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 25 v_t values found before 2020-02-07 12:08:00 and after 2020-02-07 15:06:00 INFO 2024-04-09 23:24:09,522Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-09 23:24:09,523Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T120850/202002071208_202002071506.nc4 INFO 2024-04-09 23:24:09,665Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 26285 vehicle dead reckoned longitude and latitude values INFO 2024-04-09 23:24:09,718Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 0 longitude_fix and latititude_fix values from /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T120850/202002071208_202002071506.nc4 INFO 2024-04-09 23:24:09,719Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment WARNING 2024-04-09 23:24:09,719Z lrauvNc4ToNetcdf.py nudge_coords():800 No values in lat_fix. Returning from nudge_coords() with original coords INFO 2024-04-09 23:24:09,739Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20200207T110850/20200207T160610/data.csv INFO 2024-04-09 23:24:09,834Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-09 23:24:09,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-09 23:24:10,171Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-09 23:24:10,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/whoidhs/missionlogs/2020/20200207_20200207/20200207T120850/202002071208_202002071506_2S_scieng.nc INFO 2024-04-09 23:24:10,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1401 Removing /tmp/202002071208_202002071506.nc4