##-- file opened 2019-08-16T14:59:27.441Z @10:59:28.51 -> showStatus @10:59:30.13 -> Cmd.loadCartridge -4 @10:59:30.28 Gate.power :main,:ON,limit to 5000mA @10:59:30.29 Gate.power :analytic1,:ON,limit to 5000mA @10:59:30.31 Gate.power :analytic2,:ON,limit to 5000mA @10:59:30.34 Gate.power :analytic3,:ON,limit to 5000mA @10:59:30.46 Powering core bus @10:59:32.75 SPR Module 1, FW Rev. B, FPGA Rev. C @10:59:32.89 Archive.configure :default @10:59:33.01 Air.configure :default @10:59:33.11 Lysis1.configure :default @10:59:33.21 Lysis2.configure :default @10:59:33.33 Plunge.configure :default @10:59:33.45 SamplePump.configure :default @10:59:33.57 ExtraPump.configure :default @10:59:33.69 Toroid.configure :default @10:59:33.81 Carousel.configure :default @10:59:33.93 Pressure.configure :default @10:59:34.03 PinPort.configure :default @10:59:34.09 All elf controllers running firmware version 4.58 @10:59:34.11 Gate.power :motor,:ON,limit to 5000mA @10:59:34.36 Archive.reconfigure :default @10:59:34.63 Toroid.reconfigure :default @10:59:34.72 Plunge.reconfigure :default @10:59:34.76 Lysis1.reconfigure :default @10:59:34.79 PinPort.reconfigure :default @10:59:34.84 Air.reconfigure :default @10:59:34.90 Lysis2.reconfigure :default @10:59:35.10 Air.home.jog 0 @10:59:35.15 PinPort.home.jog 0 @10:59:35.21 Lysis1.home.jog 0 @10:59:35.26 Plunge.home.jog 0 @10:59:35.32 Lysis2.home.jog 0 @10:59:35.38 Archive.home.jog 0 @10:59:35.44 Toroid.home.jog 0 @10:59:35.97 Toroid.reconfigure :homing @10:59:36.03 Plunge.reconfigure :homing @10:59:36.08 Lysis1.reconfigure :homing @10:59:36.11 PinPort.reconfigure :homing @10:59:36.16 Air.reconfigure :homing @10:59:36.19 Archive.reconfigure :homing @10:59:36.24 Lysis2.reconfigure :homing @10:59:36.48 Plunge.jog 102 @10:59:36.54 PinPort.jog -107 @10:59:36.59 Toroid.jog 637 @10:59:36.65 Archive.jog 1381 @10:59:36.70 Air.jog 1400 @10:59:36.77 Lysis1.jog 1394 @10:59:36.83 Lysis2.jog 1428 @10:59:36.91 PinPort.setRawPosition! 0 @10:59:36.93 Plunge.setRawPosition! 50 @10:59:37.00 PinPort.seek :home @10:59:37.04 Plunge.seek :home @10:59:37.18 PinPort.reconfigure :default @10:59:37.38 Plunge.reconfigure :default @10:59:37.81 Archive.setRawPosition! 50 @10:59:37.86 Archive.seek :home @10:59:37.96 Lysis1.setRawPosition! 50 @10:59:37.97 Air.setRawPosition! 50 @10:59:38.05 Lysis1.seek :home @10:59:38.09 Air.seek :home @10:59:38.24 Lysis2.setRawPosition! 50 @10:59:38.26 Archive.reconfigure :default @10:59:38.33 Lysis2.seek :home @10:59:38.48 Lysis1.reconfigure :default @10:59:38.50 Air.reconfigure :default @10:59:38.67 Lysis2.reconfigure :default @10:59:38.76 Toroid.setRawPosition! 0 @10:59:38.81 Toroid.seek :home @10:59:38.91 Toroid.reconfigure :default @10:59:39.04 Toroid.seek :clear @10:59:40.67 Carousel.reconfigure :default @10:59:40.74 Carousel.home.jog 0 @10:59:41.24 Carousel.seek 58 @10:59:41.53 Selecting Cartridge 57 @10:59:41.76 Carousel.seek 57 @10:59:42.24 Lysis1.seek :locked @10:59:46.38 Plunge.seek :locked @10:59:46.50 Air.seek :locked @10:59:50.63 Powering cartridge bus @10:59:52.75 Gate.setIR 1750,5000,0,6 @10:59:52.88 Gate.setIR 0,5000,0,6 @10:59:52.92 Loaded Archive Cartridge @10:59:52.93 Gate.power :cartridge,:OFF @11:00:08.63 -> Cmd.startFiltering @11:00:08.86 Duration of filtering limited to 2:05:00 @11:00:09.11 Priming sample loop w/100ml, bypass w/10ml @11:00:09.12 SamplePump.setPosition! 0ml @11:00:09.17 Bypass.open @11:00:10.68 Intake.open @11:00:11.51 Waiting up to 20 seconds for sea pressure to stabilize +/-0.50psi @11:00:14.63 Vacuum tare is 52% of full scale @11:00:14.76 Pressure.reconfigure :default @11:00:14.82 Pressure.hold @11:00:14.99 SamplePump.reconfigure :prime @11:00:15.06 SamplePump.seek 10ml,1:21 @11:00:24.01 Pressure.coast @11:00:24.06 SamplePump.setPosition! 0ml @11:00:24.11 Exhaust.open @11:00:25.53 Bypass.close @11:00:27.07 Pressure.reconfigure :default @11:00:27.13 Pressure.hold @11:00:27.35 SamplePump.reconfigure :prime @11:00:27.42 SamplePump.seek 100ml,8:51 @11:02:14.29 Pressure.coast @11:02:14.35 Bypass.open @11:02:15.07 Intake.close @11:02:15.90 Toroid.reconfigure :hold @11:02:15.96 Toroid.seek :crack @11:02:16.76 Toroid.reconfigure :default @11:02:16.82 Toroid.seek :clear @11:02:18.38 Toroid.reconfigure :hold @11:02:18.45 Toroid.seek :cartridge @11:02:20.27 Toroid.reconfigure :default @11:02:20.33 Toroid.seek :clear @11:02:22.31 Pressurizing cartridge to 26psi above 12.5psia @11:02:22.32 SamplePump.setPosition! 0ml @11:02:22.36 Intake.open @11:02:23.10 Bypass.close @11:02:23.81 Exhaust.close @11:02:24.58 Pressure.reconfigure :default @11:02:24.63 Pressure.hold @11:02:24.80 SamplePump.reconfigure :charge @11:02:24.87 SamplePump.seek 2.3ml,42 seconds @11:02:32.73 Pressure.coast @11:02:32.78 Intake.close @11:02:33.64 Pressurized cartridge with 0.287ml to 26.2psi @11:02:33.65 Isolated @34.5psia (22.0psi) @11:02:33.66 Checking for cartridge leaks from 34.5psia @11:02:33.69 Waiting up to 20 seconds for cartridge pressure to stabilize +/-0.75psi @11:02:38.74 Cartridge pressure fell 1% to 34.2psia @11:02:38.82 Sampling 1000.0ml @11:02:38.83 SamplePump.setPosition! 0ml @11:02:38.88 Exhaust.open @11:02:39.57 Intake.open @11:02:40.46 Pressure.reconfigure :default @11:02:40.52 Pressure.hold @11:02:40.73 SamplePump.reconfigure :sample @11:02:40.80 SamplePump.seek 1000ml,1:23:53 @11:02:43.49 Cartridge 57 sampling 1/1000ml at 0.44ml/s with 22.2psi vacuum @11:03:43.50 Cartridge 57 sampling 25/1000ml at 0.39ml/s with 23.4psi vacuum @11:04:43.51 Cartridge 57 sampling 47/1000ml at 0.35ml/s with 25.0psi vacuum @11:05:43.50 Cartridge 57 sampling 64/1000ml at 0.29ml/s with 27.3psi vacuum @11:06:43.50 Cartridge 57 sampling 79/1000ml at 0.21ml/s with 21.0psi vacuum @11:07:43.50 Cartridge 57 sampling 91/1000ml at 0.20ml/s with 29.1psi vacuum @11:08:08.63 Flow averaged 0.30ml/s over 5:23 @11:08:08.66 Waiting up to 25 seconds for vacuum to reduce from 32.9 to 18.0psi @11:08:09.35 Relieved excess vacuum in 5.7 seconds @11:08:09.38 SamplePump.seek 1000ml,1:15:50 @11:08:14.42 Flow estimate reduced to 0.24ml/s @11:08:14.46 Waiting up to 23 seconds for vacuum to reduce from 31.9 to 18.0psi @11:08:15.15 Relieved excess vacuum in 2.7 seconds @11:08:15.18 SamplePump.seek 1000ml,1:15:45 @11:08:18.62 Flow estimate reduced to 0.19ml/s @11:08:18.65 Intake.close @11:08:18.72 Exhaust.close @11:08:18.86 Toroid.reconfigure :hold @11:08:18.94 Toroid.seek :bypass @11:08:20.55 Toroid.reconfigure :default @11:08:20.62 Toroid.seek :clear @11:08:22.24 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @11:08:22.26 Pressure.coast @11:08:22.44 Sampled 98.2ml @11:08:24.56 -> Cmd.startProcessing @11:08:24.82 Plunge.seek :reagent @11:08:25.68 Sample loop closed. Ready to Deliver Reagents @11:08:25.69 Archive.seek :sealed @11:08:29.97 Archive.seek :evac @11:08:43.92 delay 1:00 @11:09:43.94 Archive.seek :clear @11:10:01.67 RNAlater soak for 10:00 @11:20:02.06 Archive.seek :tVent @11:20:04.64 delay 1 second @11:20:05.66 Archive.seek :evac @11:20:21.29 delay 10 seconds @11:20:31.32 Archive.seek :tVent @11:20:46.95 delay 1 second @11:20:47.97 Archive.seek :evac @11:21:03.61 delay 10 seconds @11:21:13.64 Sample preserved and evacuated @11:21:14.56 -> Cmd.stop @11:21:14.70 Carousel.seek 57 @11:21:14.87 Plunge.seek :locked @11:21:15.71 PinPort.seek :clear @11:21:15.85 Archive.seek :clear @11:21:15.98 Air.seek :clear @11:21:16.11 Lysis1.seek :clear @11:21:33.62 Archive.coast @11:21:33.67 Air.coast @11:21:33.72 Lysis1.coast @11:21:33.77 Lysis2.coast @11:21:33.82 Plunge.coast @11:21:33.87 SamplePump.coast @11:21:33.92 Toroid.coast @11:21:33.98 Carousel.coast @11:21:34.03 PinPort.coast @11:21:34.21 Gate.power :motor,:OFF @11:21:34.23 Gate.power :core,:OFF @11:21:34.25 Gate.power :analytic1,:OFF @11:21:34.27 Gate.power :analytic2,:OFF @11:21:34.29 Gate.power :analytic3,:OFF @11:21:34.31 Gate.power :main,:OFF @11:21:34.33 Safely stopped and ready to power off ##-- file closed 2019-08-16T15:30:22.330Z ##-- file opened 2019-08-16T15:30:22.337Z @11:30:22.72 -> showStatus @11:30:24.80 -> Cmd.loadCartridge -15 @11:30:24.95 Gate.power :main,:ON,limit to 5000mA @11:30:24.96 Gate.power :analytic1,:ON,limit to 5000mA @11:30:24.98 Gate.power :analytic2,:ON,limit to 5000mA @11:30:25.01 Gate.power :analytic3,:ON,limit to 5000mA @11:30:25.14 Powering core bus @11:30:27.42 SPR Module 1, FW Rev. B, FPGA Rev. C @11:30:27.55 Archive.configure :default @11:30:27.67 Air.configure :default @11:30:27.77 Lysis1.configure :default @11:30:27.87 Lysis2.configure :default @11:30:27.99 Plunge.configure :default @11:30:28.11 SamplePump.configure :default @11:30:28.23 ExtraPump.configure :default @11:30:28.35 Toroid.configure :default @11:30:28.47 Carousel.configure :default @11:30:28.59 Pressure.configure :default @11:30:28.69 PinPort.configure :default @11:30:28.75 All elf controllers running firmware version 4.58 @11:30:28.77 Gate.power :motor,:ON,limit to 5000mA @11:30:28.93 Archive.reconfigure :default @11:30:29.27 Archive.home.jog 0 @11:30:29.44 Toroid.reconfigure :default @11:30:29.49 Plunge.reconfigure :default @11:30:29.52 Lysis1.reconfigure :default @11:30:29.55 Air.reconfigure :default @11:30:29.59 PinPort.reconfigure :default @11:30:29.63 Lysis2.reconfigure :default @11:30:29.89 Air.home.jog 0 @11:30:29.94 Lysis2.home.jog 0 @11:30:30.00 Toroid.home.jog 0 @11:30:30.06 PinPort.home.jog 0 @11:30:30.12 Plunge.home.jog 0 @11:30:30.17 Lysis1.home.jog 0 @11:30:30.41 Archive.reconfigure :homing @11:30:30.68 Toroid.reconfigure :homing @11:30:30.70 Plunge.reconfigure :homing @11:30:30.75 PinPort.reconfigure :homing @11:30:30.80 Lysis2.reconfigure :homing @11:30:30.84 Air.reconfigure :homing @11:30:31.03 Air.jog 1399 @11:30:31.09 Archive.jog 1381 @11:30:31.14 Plunge.jog 1562 @11:30:31.20 Lysis2.jog 1427 @11:30:31.25 PinPort.jog -106 @11:30:31.31 Toroid.jog 634 @11:30:31.39 Lysis1.reconfigure :homing @11:30:31.45 Lysis1.jog 1397 @11:30:31.53 PinPort.setRawPosition! 0 @11:30:31.58 PinPort.seek :home @11:30:31.66 PinPort.reconfigure :default @11:30:32.19 Air.setRawPosition! 50 @11:30:32.24 Air.seek :home @11:30:32.33 Archive.setRawPosition! 50 @11:30:32.39 Archive.seek :home @11:30:32.48 Plunge.setRawPosition! 50 @11:30:32.50 Lysis2.setRawPosition! 50 @11:30:32.57 Plunge.seek :home @11:30:32.62 Lysis2.seek :home @11:30:32.79 Lysis1.setRawPosition! 50 @11:30:32.82 Archive.reconfigure :default @11:30:32.85 Air.reconfigure :default @11:30:32.92 Lysis1.seek :home @11:30:33.11 Plunge.reconfigure :default @11:30:33.14 Lysis2.reconfigure :default @11:30:33.30 Lysis1.reconfigure :default @11:30:33.46 Toroid.setRawPosition! 0 @11:30:33.51 Toroid.seek :home @11:30:33.60 Toroid.reconfigure :default @11:30:33.73 Toroid.seek :clear @11:30:35.36 Carousel.reconfigure :default @11:30:35.43 Carousel.home.jog 0 @11:30:35.92 Carousel.seek 57 @11:30:36.07 Selecting Cartridge 56 @11:30:36.32 Carousel.seek 56 @11:30:36.82 Lysis1.seek :locked @11:30:40.94 Plunge.seek :locked @11:30:41.06 Air.seek :locked @11:30:45.19 Powering cartridge bus @11:30:47.31 Gate.setIR 1750,5000,0,6 @11:30:47.44 Gate.setIR 0,5000,0,6 @11:30:47.49 Loaded Lyse-n-Go Cartridge @11:30:47.51 PuckHeater.configure HeatConfig @11:30:47.56 Gate.power :heat,:ON,limit to 5000mA @11:31:03.57 -> Cmd.startFiltering @11:31:03.80 Duration of filtering limited to 2:05:00 @11:31:04.07 Priming sample loop w/100ml, bypass w/10ml @11:31:04.09 SamplePump.setPosition! 0ml @11:31:04.13 Bypass.open @11:31:05.60 Intake.open @11:31:06.44 Waiting up to 20 seconds for sea pressure to stabilize +/-0.50psi @11:31:09.65 Vacuum tare is 52% of full scale @11:31:09.78 Pressure.reconfigure :default @11:31:09.84 Pressure.hold @11:31:10.02 SamplePump.reconfigure :prime @11:31:10.10 SamplePump.seek 10ml,1:21 @11:31:19.06 Pressure.coast @11:31:19.12 SamplePump.setPosition! 0ml @11:31:19.17 Exhaust.open @11:31:20.62 Bypass.close @11:31:22.14 Pressure.reconfigure :default @11:31:22.20 Pressure.hold @11:31:22.42 SamplePump.reconfigure :prime @11:31:22.49 SamplePump.seek 100ml,8:51 @11:33:13.17 Pressure.coast @11:33:13.23 Bypass.open @11:33:13.97 Intake.close @11:33:14.82 Toroid.reconfigure :hold @11:33:14.89 Toroid.seek :crack @11:33:15.68 Toroid.reconfigure :default @11:33:15.74 Toroid.seek :clear @11:33:17.30 Toroid.reconfigure :hold @11:33:17.37 Toroid.seek :cartridge @11:33:19.18 Toroid.reconfigure :default @11:33:19.24 Toroid.seek :clear @11:33:21.22 Pressurizing cartridge to 26psi above 14.4psia @11:33:21.23 SamplePump.setPosition! 0ml @11:33:21.28 Intake.open @11:33:22.00 Bypass.close @11:33:22.77 Exhaust.close @11:33:23.61 Pressure.reconfigure :default @11:33:23.67 Pressure.hold @11:33:23.83 SamplePump.reconfigure :charge @11:33:23.90 SamplePump.seek 2.3ml,42 seconds @11:33:35.80 Pressure.coast @11:33:35.85 Intake.close @11:33:36.66 Pressurized cartridge with 0.665ml to 26.3psi @11:33:36.67 Isolated @37.0psia (22.7psi) @11:33:36.68 Checking for cartridge leaks from 37.0psia @11:33:36.71 Waiting up to 20 seconds for cartridge pressure to stabilize +/-0.75psi @11:33:41.86 Sampling 1000.0ml @11:33:41.87 SamplePump.setPosition! 0ml @11:33:41.92 Exhaust.open @11:33:42.66 Intake.open @11:33:43.53 Pressure.reconfigure :default @11:33:43.59 Pressure.hold @11:33:43.81 SamplePump.reconfigure :sample @11:33:43.89 SamplePump.seek 1000ml,1:23:53 @11:33:46.57 Cartridge 56 sampling 1/1000ml at 0.56ml/s with 22.8psi vacuum @11:34:46.56 Cartridge 56 sampling 34/1000ml at 0.56ml/s with 24.2psi vacuum 2.6m deep (18.5psia) @11:35:46.56 Cartridge 56 sampling 66/1000ml at 0.52ml/s with 23.2psi vacuum 3.7m deep (20.1psia) @11:36:46.56 Cartridge 56 sampling 96/1000ml at 0.50ml/s with 22.4psi vacuum 3.5m deep (19.9psia) @11:37:46.56 Cartridge 56 sampling 126/1000ml at 0.50ml/s with 24.3psi vacuum @11:38:46.56 Cartridge 56 sampling 154/1000ml at 0.45ml/s with 30.3psi vacuum @11:39:46.56 Cartridge 56 sampling 182/1000ml at 0.42ml/s with 24.6psi vacuum @11:40:46.56 Cartridge 56 sampling 208/1000ml at 0.43ml/s with 30.3psi vacuum @11:41:46.56 Cartridge 56 sampling 234/1000ml at 0.41ml/s with 20.6psi vacuum @11:42:46.56 Cartridge 56 sampling 260/1000ml at 0.38ml/s with 25.3psi vacuum @11:43:46.56 Cartridge 56 sampling 284/1000ml at 0.37ml/s with 25.1psi vacuum @11:44:46.56 Cartridge 56 sampling 307/1000ml at 0.38ml/s with 23.1psi vacuum @11:45:46.56 Cartridge 56 sampling 330/1000ml at 0.39ml/s with 18.9psi vacuum 4.2m deep (20.9psia) @11:46:46.56 Cartridge 56 sampling 351/1000ml at 0.36ml/s with 24.2psi vacuum 5.6m deep (22.9psia) @11:47:46.56 Cartridge 56 sampling 371/1000ml at 0.34ml/s with 25.3psi vacuum 4.5m deep (21.3psia) @11:48:46.56 Cartridge 56 sampling 391/1000ml at 0.34ml/s with 20.0psi vacuum 3.0m deep (19.1psia) @11:49:46.56 Cartridge 56 sampling 409/1000ml at 0.26ml/s with 23.2psi vacuum @11:50:46.56 Cartridge 56 sampling 426/1000ml at 0.29ml/s with 24.6psi vacuum @11:51:46.56 Cartridge 56 sampling 442/1000ml at 0.27ml/s with 24.7psi vacuum @11:52:46.56 Cartridge 56 sampling 457/1000ml at 0.22ml/s with 23.3psi vacuum @11:53:46.56 Cartridge 56 sampling 472/1000ml at 0.21ml/s with 22.9psi vacuum @11:54:46.56 Cartridge 56 sampling 485/1000ml at 0.24ml/s with 22.9psi vacuum @11:55:46.56 Cartridge 56 sampling 498/1000ml at 0.20ml/s with 27.0psi vacuum @11:56:46.56 Cartridge 56 sampling 511/1000ml at 0.22ml/s with 23.9psi vacuum @11:57:46.56 Cartridge 56 sampling 523/1000ml at 0.20ml/s with 26.8psi vacuum @11:58:46.56 Cartridge 56 sampling 535/1000ml at 0.20ml/s with 28.7psi vacuum @11:59:46.56 Cartridge 56 sampling 547/1000ml at 0.20ml/s with 26.0psi vacuum @11:59:55.93 Flow averaged 0.35ml/s over 26:03 @11:59:55.96 Waiting up to 13 seconds for vacuum to reduce from 28.0 to 18.0psi @11:59:57.05 Relieved excess vacuum in 10.4 seconds @11:59:57.07 SamplePump.seek 1000ml,38:05 @12:00:20.98 Flow averaged 0.24ml/s over 20 seconds @12:00:21.01 Waiting up to 10 seconds for vacuum to reduce from 26.8 to 18.0psi @12:00:21.71 Relieved excess vacuum in 4.9 seconds @12:00:21.73 SamplePump.seek 1000ml,37:41 @12:00:39.37 Flow averaged 0.27ml/s over 14 seconds @12:00:39.40 Waiting up to 13 seconds for vacuum to reduce from 27.9 to 18.0psi @12:00:40.10 Relieved excess vacuum in 5.3 seconds @12:00:40.12 SamplePump.seek 1000ml,37:23 @12:00:46.56 Cartridge 56 sampling 559/1000ml at 0.20ml/s with 29.0psi vacuum @12:00:54.60 Flow estimate reduced to 0.21ml/s @12:00:54.63 Waiting up to 13 seconds for vacuum to reduce from 28.1 to 18.0psi @12:00:55.33 Relieved excess vacuum in 8.7 seconds @12:00:55.35 SamplePump.seek 1000ml,37:09 @12:01:08.29 Flow estimate reduced to 0.17ml/s @12:01:08.30 Intake.close @12:01:08.38 Exhaust.close @12:01:08.53 Toroid.reconfigure :hold @12:01:08.60 Toroid.seek :bypass @12:01:10.22 Toroid.reconfigure :default @12:01:10.29 Toroid.seek :clear @12:01:11.91 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @12:01:11.93 Pressure.coast @12:01:12.11 Sampled 563.1ml @12:01:14.01 -> Cmd.startProcessing @12:01:15.87 SPR.command \"read_sequences\" @12:01:16.41 SPR.command \"stats_on\" @12:01:16.45 SPR.command \"start 0 1\" @12:01:18.46 Begun log /var/log/esp/spr19aug1612h.spr @12:01:19.48 AnalyticModule::ReadTimeout in PROCESSING -- No response from SPR on AMspr (try 1 of 3) @12:01:21.15 Handoff.select :waste @12:01:21.33 Archive.seek :empty @12:01:28.49 Syringe tare is 20% of full scale @12:01:39.05 PinPort.seek :cartridge @12:01:43.61 Lysis1.seek 1350ul @12:01:46.09 Lysis2.seek 1700ul @12:01:49.18 Plunge.seek :reagent @12:01:50.02 Evacuating puck with filter bubble point of 50psi @12:01:50.04 PinPort.seek :cartridge @12:01:50.12 Handoff.select :waste @12:01:57.51 Air pumping 1 strokes to reach 8psi @12:01:57.53 Air.reconfigure :gulp @12:01:57.62 Air.seek :tVent @12:01:59.41 -0.0psi after gulp @12:01:59.42 Air stroke #1 of 1 @12:01:59.44 Air.reconfigure :pressurize @12:01:59.54 Air.seek :pressurized @12:02:12.38 -0.0psi after pressurize @12:02:12.39 Air.reconfigure :compress @12:02:12.47 Air.seek :evac @12:02:15.13 0.1psi after compress @12:02:29.10 0.3psi after compress (stable) @12:02:29.22 at 0.3psi Opened to waste @12:02:29.23 Handoff.select :blocked @12:02:29.40 Air pumping 10 strokes to reach 50psi @12:02:29.42 Air.reconfigure :gulp @12:02:29.50 Air.seek :tVent @12:02:39.39 7.9psi after gulp @12:02:39.40 Air stroke #1 of 10 @12:02:39.42 Air.reconfigure :pressurize @12:02:39.50 Air.seek :pressurized @12:02:52.76 11.2psi after pressurize @12:02:52.78 Air.reconfigure :compress @12:02:52.86 Air.seek :evac @12:02:55.53 13.0psi after compress @12:03:31.66 35.2psi after compress (stable) @12:03:31.68 Air.reconfigure :gulp @12:03:31.76 Air.seek :tVent @12:03:41.67 36.9psi after gulp @12:03:41.68 Air stroke #2 of 10 @12:03:41.70 Air.reconfigure :pressurize @12:03:41.79 Air.seek :pressurized @12:03:54.63 34.6psi after pressurize @12:03:54.64 Air.reconfigure :compress @12:03:54.73 Air.seek :evac @12:03:57.39 33.2psi after compress @12:04:20.25 Reached 50.0 of 50.0psi after pumping 4672ul (3.00 strokes) @12:04:20.27 Handoff.select :waste @12:04:40.19 delay 30 seconds @12:05:10.21 Handoff.select :blocked @12:05:44.13 Handoff.select :waste @12:05:44.25 PSI at @6.66psi at evacEnd @12:05:44.26 Handoff.select :blocked @12:05:44.38 Air.reconfigure :gulp @12:05:44.49 Air.seek :tVent @12:06:01.57 Stable @4.6psi after Handoff blocked @12:06:01.68 Air pumping 10 strokes to reach 35psi @12:06:01.69 Air stroke #1 of 10 @12:06:01.71 Air.reconfigure :pressurize @12:06:01.79 Air.seek :pressurized @12:06:14.63 5.2psi after pressurize @12:06:14.64 Air.reconfigure :compress @12:06:14.72 Air.seek :evac @12:06:17.39 7.3psi after compress @12:06:43.82 21.6psi after compress (stable) @12:06:43.84 Air.reconfigure :gulp @12:06:43.91 Air.seek :tVent @12:06:53.81 22.2psi after gulp @12:06:53.82 Air stroke #2 of 10 @12:06:53.84 Air.reconfigure :pressurize @12:06:53.92 Air.seek :pressurized @12:07:06.76 22.1psi after pressurize @12:07:06.77 Air.reconfigure :compress @12:07:06.86 Air.seek :evac @12:07:09.54 23.1psi after compress @12:07:29.55 32.0psi after compress (stable) @12:07:29.58 Air.reconfigure :gulp @12:07:29.66 Air.seek :tVent @12:07:39.55 32.6psi after gulp @12:07:39.56 Air stroke #3 of 10 @12:07:39.58 Air.reconfigure :pressurize @12:07:39.66 Air.seek :pressurized @12:07:52.49 32.4psi after pressurize @12:07:52.51 Air.reconfigure :compress @12:07:52.58 Air.seek :evac @12:07:55.25 32.4psi after compress @12:08:07.30 Reached 34.8 of 34.6psi after pumping 6230ul (4.00 strokes) @12:08:07.31 Handoff.select :waste @12:08:21.64 delay 30 seconds @12:08:51.66 Handoff.select :blocked @12:09:16.67 Handoff.select :waste @12:09:16.79 PSI at @0.55psi at evacEnd @12:09:16.81 Air.reconfigure :default @12:09:16.92 Air.seek :fVent @12:09:18.35 delay 5 seconds @12:09:23.38 Seawater evacuated, Presure above/below filter released. Lysis begins @12:09:23.45 Lysis1.reconfigure :slow @12:09:23.51 Lysis1.seek 1050ul @12:09:53.56 delay 5 seconds @12:09:58.58 Handoff.select :blocked @12:09:58.74 Lysis1.seek 450ul @12:10:58.73 delay 3 seconds @12:11:01.80 Air.reconfigure to mix into 1.37806 parts Lysis1 @12:11:02.30 Air.seek :evac @12:11:02.34 Lysis1.seek 300ul @12:11:17.47 Air.reconfigure :default @12:11:17.56 Air.seek :full @12:11:31.77 Lysis1.seek :empty @12:12:01.88 Lysis Delivered. Syringe pressure @75.1psi @12:12:01.92 PuckHeater.seek 84.2C @12:12:55.62 PuckHeater.hold 15:00,84.2C @12:27:55.79 Lysis complete. Syringe pressure @79.9psi @12:27:55.80 Handoff.select :blocked @12:27:55.91 Lysis1.reconfigure :halfSpeed @12:27:55.97 Lysis1.seek 200ul @12:27:59.75 delay 1 second @12:28:00.77 Lysis1.seek :empty @12:28:04.60 Initial AirS pressure @80.0psi @12:28:04.66 Lysis1.reconfigure :extract @12:28:04.75 Lysis1.seek 900ul,10:00 @12:28:06.45 Air pumping 10 strokes to reach 24psi @12:28:06.46 Air stroke #1 of 10 @12:28:06.48 Air.reconfigure :pressurize @12:28:06.56 Air.seek :pressurized @12:28:19.41 15.2psi after pressurize @12:28:19.43 Air.reconfigure :compress @12:28:19.51 Air.seek :evac @12:28:22.17 20.6psi after compress @12:28:36.46 18.8psi after compress (stable) @12:28:36.48 Air.reconfigure :gulp @12:28:36.55 Air.seek :tVent @12:28:46.48 18.8psi after gulp @12:28:46.49 Air stroke #2 of 10 @12:28:46.51 Air.reconfigure :pressurize @12:28:46.60 Air.seek :pressurized @12:28:59.44 18.8psi after pressurize @12:28:59.45 Air.reconfigure :compress @12:28:59.53 Air.seek :evac @12:29:02.21 19.6psi after compress @12:29:04.41 Air.reconfigure :default @12:29:04.47 Air.hold @12:29:04.66 Lysis1 at 900ul @20.5psi @12:29:04.67 Lysis1.reconfigure :default @12:29:04.75 Lysis1.seek 925ul @12:29:05.46 Syringe::Overpressure in PROCESSING -- 22.2psi after recovery pull -- Skipping SPR @12:29:05.48 SPR.command \"start 2 14\" @12:29:06.76 Handoff.select :waste @12:29:07.25 Ended log /var/log/esp/spr19aug1612h.spr @12:29:07.27 SPR.command \"stats_off\" @12:29:09.19 -> Cmd.stop @12:29:09.28 Handoff.select :close @12:29:09.40 Gate.power :heat,:OFF @12:29:09.42 Gate.power :cartridge,:OFF @12:29:09.50 Carousel.seek 56 @12:29:09.67 Plunge.seek :locked @12:29:10.51 PinPort.seek :clear @12:29:15.13 Archive.seek :clear @12:29:15.26 Air.seek :clear @12:29:15.39 Lysis1.seek :clear @12:29:15.52 Lysis2.seek :clear @12:29:32.89 Archive.coast @12:29:32.94 Air.coast @12:29:32.99 Lysis1.coast @12:29:33.04 Lysis2.coast @12:29:33.09 Plunge.coast @12:29:33.14 SamplePump.coast @12:29:33.19 Toroid.coast @12:29:33.24 Carousel.coast @12:29:33.30 PinPort.coast @12:29:33.48 Gate.power :motor,:OFF @12:29:33.49 Gate.power :core,:OFF @12:29:33.52 Gate.power :analytic1,:OFF @12:29:33.54 Gate.power :analytic2,:OFF @12:29:33.56 Gate.power :analytic3,:OFF @12:29:33.58 Gate.power :main,:OFF @12:29:33.60 Safely stopped and ready to power off ##-- file closed 2019-08-16T18:17:01.853Z ##-- file opened 2019-08-16T18:17:01.855Z @14:17:01.78 -> showStatus @14:17:03.80 -> Cmd.loadCartridge -4 @14:17:03.94 Gate.power :main,:ON,limit to 5000mA @14:17:03.96 Gate.power :analytic1,:ON,limit to 5000mA @14:17:03.98 Gate.power :analytic2,:ON,limit to 5000mA @14:17:04.00 Gate.power :analytic3,:ON,limit to 5000mA @14:17:04.13 Powering core bus @14:17:06.42 SPR Module 1, FW Rev. B, FPGA Rev. C @14:17:06.54 Archive.configure :default @14:17:06.66 Air.configure :default @14:17:06.77 Lysis1.configure :default @14:17:06.87 Lysis2.configure :default @14:17:06.98 Plunge.configure :default @14:17:07.10 SamplePump.configure :default @14:17:07.33 ExtraPump.configure :default @14:17:07.45 Toroid.configure :default @14:17:07.57 Carousel.configure :default @14:17:07.69 Pressure.configure :default @14:17:07.79 PinPort.configure :default @14:17:07.85 All elf controllers running firmware version 4.58 @14:17:07.87 Gate.power :motor,:ON,limit to 5000mA @14:17:08.09 Archive.reconfigure :default @14:17:08.32 Archive.home.jog 0 @14:17:08.45 Toroid.reconfigure :default @14:17:08.53 Plunge.reconfigure :default @14:17:08.57 Lysis2.reconfigure :default @14:17:08.60 Lysis1.reconfigure :default @14:17:08.67 PinPort.reconfigure :default @14:17:08.71 Air.reconfigure :default @14:17:08.92 Lysis1.home.jog 0 @14:17:08.98 PinPort.home.jog 0 @14:17:09.04 Toroid.home.jog 0 @14:17:09.10 Lysis2.home.jog 0 @14:17:09.15 Plunge.home.jog 0 @14:17:09.21 Air.home.jog 0 @14:17:09.57 Archive.reconfigure :homing @14:17:09.75 Toroid.reconfigure :homing @14:17:09.78 Plunge.reconfigure :homing @14:17:09.82 Air.reconfigure :homing @14:17:09.86 Lysis1.reconfigure :homing @14:17:09.90 PinPort.reconfigure :homing @14:17:09.95 Lysis2.reconfigure :homing @14:17:10.16 Lysis1.jog 1401 @14:17:10.22 Air.jog 1411 @14:17:10.28 Toroid.jog 629 @14:17:10.33 Lysis2.jog 1424 @14:17:10.38 Archive.jog 1381 @14:17:10.45 PinPort.jog -107 @14:17:10.51 Plunge.jog 1551 @14:17:10.68 PinPort.setRawPosition! 0 @14:17:10.72 PinPort.seek :home @14:17:10.82 PinPort.reconfigure :default @14:17:11.32 Lysis1.setRawPosition! 50 @14:17:11.37 Lysis1.seek :home @14:17:11.46 Air.setRawPosition! 50 @14:17:11.52 Air.seek :home @14:17:11.60 Lysis2.setRawPosition! 50 @14:17:11.62 Archive.setRawPosition! 50 @14:17:11.72 Archive.seek :home @14:17:11.75 Lysis2.seek :home @14:17:11.91 Lysis1.reconfigure :default @14:17:11.94 Plunge.setRawPosition! 50 @14:17:11.97 Air.reconfigure :default @14:17:12.04 Plunge.seek :home @14:17:12.20 Lysis2.reconfigure :default @14:17:12.23 Archive.reconfigure :default @14:17:12.39 Plunge.reconfigure :default @14:17:12.47 Toroid.setRawPosition! 0 @14:17:12.51 Toroid.seek :home @14:17:12.61 Toroid.reconfigure :default @14:17:12.74 Toroid.seek :clear @14:17:14.36 Carousel.reconfigure :default @14:17:14.43 Carousel.home.jog 0 @14:17:14.93 Carousel.seek 56 @14:17:15.06 Selecting Cartridge 55 @14:17:15.30 Carousel.seek 55 @14:17:15.78 Lysis1.seek :locked @14:17:19.92 Plunge.seek :locked @14:17:20.04 Air.seek :locked @14:17:24.17 Powering cartridge bus @14:17:26.29 Gate.setIR 1750,5000,0,6 @14:17:26.42 Gate.setIR 0,5000,0,6 @14:17:26.46 Loaded Archive Cartridge Gate.power :cartridge,:OFF @14:17:42.69 -> Cmd.startFiltering @14:17:42.92 Duration of filtering limited to 2:05:00 @14:17:43.16 Priming sample loop w/100ml, bypass w/10ml @14:17:43.18 SamplePump.setPosition! 0ml @14:17:43.22 Bypass.open @14:17:44.73 Intake.open @14:17:45.53 Sea 1.6m deep (17.0psia) @14:17:45.55 Waiting up to 20 seconds for sea pressure to stabilize +/-0.50psi @14:17:48.75 Vacuum tare is 52% of full scale @14:17:48.88 Pressure.reconfigure :default @14:17:48.94 Pressure.hold @14:17:49.11 SamplePump.reconfigure :prime @14:17:49.18 SamplePump.seek 10ml,1:21 @14:17:58.14 Pressure.coast @14:17:58.19 SamplePump.setPosition! 0ml @14:17:58.24 Exhaust.open @14:17:59.64 Bypass.close @14:18:01.16 Pressure.reconfigure :default @14:18:01.22 Pressure.hold @14:18:01.33 Sea 1.7m deep (17.2psia) @14:18:01.46 SamplePump.reconfigure :prime @14:18:01.53 SamplePump.seek 100ml,8:51 @14:19:53.26 Pressure.coast @14:19:53.31 Bypass.open @14:19:54.00 Intake.close @14:19:54.82 Toroid.reconfigure :hold @14:19:54.89 Toroid.seek :crack @14:19:55.69 Toroid.reconfigure :default @14:19:55.76 Toroid.seek :clear @14:19:57.31 Toroid.reconfigure :hold @14:19:57.38 Toroid.seek :cartridge @14:19:59.19 Toroid.reconfigure :default @14:19:59.25 Toroid.seek :clear @14:20:01.23 Pressurizing cartridge to 26psi above 16.9psia @14:20:01.24 SamplePump.setPosition! 0ml @14:20:01.29 Intake.open @14:20:02.02 Bypass.close @14:20:02.74 Exhaust.close @14:20:03.54 Pressure.reconfigure :default @14:20:03.60 Pressure.hold @14:20:03.76 SamplePump.reconfigure :charge @14:20:03.83 SamplePump.seek 2.3ml,42 seconds @14:20:10.26 Pressure.coast @14:20:10.31 Intake.close @14:20:11.14 Pressurized cartridge with 0.191ml to 26.0psi @14:20:11.15 Isolated @37.8psia (20.9psi) @14:20:11.16 Checking for cartridge leaks from 37.8psia @14:20:11.19 Waiting up to 20 seconds for cartridge pressure to stabilize +/-0.75psi @14:20:16.24 Cartridge pressure fell 2% to 37.0psia @14:20:16.32 Sampling 1000.0ml @14:20:16.33 SamplePump.setPosition! 0ml @14:20:16.38 Exhaust.open @14:20:17.10 Intake.open @14:20:17.94 Pressure.reconfigure :default @14:20:18.00 Pressure.hold @14:20:18.11 Sea 1.6m deep (17.0psia) @14:20:18.24 SamplePump.reconfigure :sample @14:20:18.31 SamplePump.seek 1000ml,1:23:53 @14:20:20.97 Cartridge 55 sampling 1/1000ml at 0.40ml/s with 19.0psi vacuum @14:21:20.98 Cartridge 55 sampling 25/1000ml at 0.40ml/s with 25.5psi vacuum @14:22:20.97 Cartridge 55 sampling 47/1000ml at 0.36ml/s with 17.8psi vacuum 3.5m deep (19.9psia) @14:23:20.98 Cartridge 55 sampling 66/1000ml at 0.30ml/s with 26.5psi vacuum @14:24:20.98 Cartridge 55 sampling 81/1000ml at 0.20ml/s with 28.1psi vacuum @14:25:20.98 Cartridge 55 sampling 94/1000ml at 0.20ml/s with 25.8psi vacuum @14:25:39.39 Flow averaged 0.31ml/s over 5:13 @14:25:39.42 Waiting up to 13 seconds for vacuum to reduce from 28.2 to 18.0psi @14:25:40.12 Relieved excess vacuum in 9 seconds @14:25:40.14 SamplePump.seek 1000ml,1:15:43 @14:25:59.21 Flow averaged 0.29ml/s over 14 seconds @14:25:59.24 Waiting up to 22 seconds for vacuum to reduce from 31.4 to 18.0psi @14:25:59.94 Relieved excess vacuum in 6.7 seconds @14:25:59.96 SamplePump.seek 1000ml,1:15:24 @14:26:06.60 Flow estimate reduced to 0.23ml/s @14:26:06.63 Waiting up to 15 seconds for vacuum to reduce from 28.8 to 18.0psi @14:26:07.33 Relieved excess vacuum in 4.3 seconds @14:26:07.35 SamplePump.seek 1000ml,1:15:18 @14:26:10.80 Flow estimate reduced to 0.19ml/s @14:26:10.82 Intake.close @14:26:10.86 Exhaust.close @14:26:11.04 Toroid.reconfigure :hold @14:26:11.11 Toroid.seek :bypass @14:26:12.73 Toroid.reconfigure :default @14:26:12.80 Toroid.seek :clear @14:26:14.42 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @14:26:14.44 Pressure.coast @14:26:14.63 Sampled 103.6ml @14:26:16.76 -> Cmd.startProcessing @14:26:17.36 Plunge.seek :reagent @14:26:18.23 Sample loop closed. Ready to Deliver Reagents @14:26:18.24 Archive.seek :sealed @14:26:22.52 Archive.seek :evac @14:26:36.46 delay 1:00 @14:27:36.49 Archive.seek :clear @14:27:54.21 RNAlater soak for 10:00 @14:37:54.24 Archive.seek :tVent @14:37:56.82 delay 1 second @14:37:57.84 Archive.seek :evac @14:38:13.47 delay 10 seconds @14:38:23.50 Archive.seek :tVent @14:38:39.14 delay 1 second @14:38:40.16 Archive.seek :evac @14:38:55.80 delay 10 seconds @14:39:05.83 Sample preserved and evacuated @14:39:06.81 -> Cmd.stop @14:39:06.95 Carousel.seek 55 @14:39:07.12 Plunge.seek :locked @14:39:07.95 PinPort.seek :clear @14:39:08.09 Archive.seek :clear @14:39:08.22 Air.seek :clear @14:39:08.35 Lysis1.seek :clear @14:39:25.85 Archive.coast @14:39:25.90 Air.coast @14:39:25.95 Lysis1.coast @14:39:26.00 Lysis2.coast @14:39:26.05 Plunge.coast @14:39:26.10 SamplePump.coast @14:39:26.15 Toroid.coast @14:39:26.20 Carousel.coast @14:39:26.25 PinPort.coast @14:39:26.44 Gate.power :motor,:OFF @14:39:26.45 Gate.power :core,:OFF @14:39:26.48 Gate.power :analytic1,:OFF @14:39:26.50 Gate.power :analytic2,:OFF @14:39:26.52 Gate.power :analytic3,:OFF @14:39:26.54 Gate.power :main,:OFF @14:39:26.56 Safely stopped and ready to power off ##-- file closed 2019-08-16T18:48:15.630Z ##-- file opened 2019-08-16T18:48:15.631Z @14:48:15.42 -> showStatus @14:48:17.44 -> Cmd.loadCartridge -15 @14:48:17.59 Gate.power :main,:ON,limit to 5000mA @14:48:17.60 Gate.power :analytic1,:ON,limit to 5000mA @14:48:17.62 Gate.power :analytic2,:ON,limit to 5000mA @14:48:17.64 Gate.power :analytic3,:ON,limit to 5000mA @14:48:17.77 Powering core bus @14:48:20.05 SPR Module 1, FW Rev. B, FPGA Rev. C @14:48:20.18 Archive.configure :default @14:48:20.30 Air.configure :default @14:48:20.40 Lysis1.configure :default @14:48:20.50 Lysis2.configure :default @14:48:20.62 Plunge.configure :default @14:48:20.74 SamplePump.configure :default @14:48:20.86 ExtraPump.configure :default @14:48:20.98 Toroid.configure :default @14:48:21.10 Carousel.configure :default @14:48:21.22 Pressure.configure :default @14:48:21.32 PinPort.configure :default @14:48:21.38 All elf controllers running firmware version 4.58 @14:48:21.40 Gate.power :motor,:ON,limit to 5000mA @14:48:21.59 Archive.reconfigure :default @14:48:21.65 Air.reconfigure :default @14:48:21.95 Air.home.jog 0 @14:48:22.03 Archive.home.jog 0 @14:48:22.17 Toroid.reconfigure :default @14:48:22.24 Plunge.reconfigure :default @14:48:22.28 Lysis1.reconfigure :default @14:48:22.33 PinPort.reconfigure :default @14:48:22.41 Lysis2.reconfigure :default @14:48:22.62 PinPort.home.jog 0 @14:48:22.68 Plunge.home.jog 0 @14:48:22.74 Lysis1.home.jog 0 @14:48:22.80 Toroid.home.jog 0 @14:48:22.86 Lysis2.home.jog 0 @14:48:23.09 Archive.reconfigure :homing @14:48:23.18 Air.reconfigure :homing @14:48:23.32 Archive.jog 1382 @14:48:23.37 Air.jog 1408 @14:48:23.52 Toroid.reconfigure :homing @14:48:23.55 Plunge.reconfigure :homing @14:48:23.58 PinPort.reconfigure :homing @14:48:23.63 Lysis2.reconfigure :homing @14:48:23.66 Lysis1.reconfigure :homing @14:48:23.85 Plunge.jog 1542 @14:48:23.91 Lysis2.jog 1428 @14:48:23.96 Toroid.jog 623 @14:48:24.02 PinPort.jog -108 @14:48:24.08 Lysis1.jog 1398 @14:48:24.26 PinPort.setRawPosition! 0 @14:48:24.30 PinPort.seek :home @14:48:24.39 PinPort.reconfigure :default @14:48:24.47 Archive.setRawPosition! 50 @14:48:24.52 Archive.seek :home @14:48:24.60 Air.setRawPosition! 50 @14:48:24.64 Air.seek :home @14:48:24.80 Archive.reconfigure :default @14:48:24.93 Air.reconfigure :default @14:48:25.09 Plunge.setRawPosition! 50 @14:48:25.14 Plunge.seek :home @14:48:25.23 Lysis2.setRawPosition! 50 @14:48:25.28 Lysis2.seek :home @14:48:25.36 Lysis1.setRawPosition! 50 @14:48:25.42 Lysis1.seek :home @14:48:25.51 Plunge.reconfigure :default @14:48:25.59 Lysis2.reconfigure :default @14:48:25.71 Lysis1.reconfigure :default @14:48:26.08 Toroid.setRawPosition! 0 @14:48:26.13 Toroid.seek :home @14:48:26.22 Toroid.reconfigure :default @14:48:26.34 Toroid.seek :clear @14:48:27.97 Carousel.reconfigure :default @14:48:28.04 Carousel.home.jog 0 @14:48:28.54 Carousel.seek 55 @14:48:28.70 Selecting Cartridge 54 @14:48:28.95 Carousel.seek 54 @14:48:29.44 Lysis1.seek :locked @14:48:33.56 Plunge.seek :locked @14:48:33.69 Air.seek :locked @14:48:37.81 Powering cartridge bus @14:48:39.93 Gate.setIR 1750,5000,0,6 @14:48:40.06 Gate.setIR 0,5000,0,6 @14:48:40.12 Loaded Lyse-n-Go Cartridge @14:48:40.13 PuckHeater.configure HeatConfig @14:48:40.18 Gate.power :heat,:ON,limit to 5000mA @14:48:56.58 -> Cmd.startFiltering @14:48:56.81 Duration of filtering limited to 2:05:00 @14:48:57.08 Priming sample loop w/100ml, bypass w/10ml @14:48:57.09 SamplePump.setPosition! 0ml @14:48:57.14 Bypass.open @14:48:58.63 Intake.open @14:48:59.78 Waiting up to 20 seconds for sea pressure to stabilize +/-0.50psi @14:49:02.62 Vacuum tare is 52% of full scale @14:49:02.75 Pressure.reconfigure :default @14:49:02.81 Pressure.hold @14:49:02.98 SamplePump.reconfigure :prime @14:49:03.05 SamplePump.seek 10ml,1:21 @14:49:12.00 Pressure.coast @14:49:12.05 SamplePump.setPosition! 0ml @14:49:12.10 Exhaust.open @14:49:13.50 Bypass.close @14:49:15.04 Pressure.reconfigure :default @14:49:15.10 Pressure.hold @14:49:15.32 SamplePump.reconfigure :prime @14:49:15.40 SamplePump.seek 100ml,8:51 @14:51:07.26 Pressure.coast @14:51:07.32 Bypass.open @14:51:08.06 Intake.close @14:51:08.85 Toroid.reconfigure :hold @14:51:08.91 Toroid.seek :crack @14:51:09.71 Toroid.reconfigure :default @14:51:09.77 Toroid.seek :clear @14:51:11.33 Toroid.reconfigure :hold @14:51:11.40 Toroid.seek :cartridge @14:51:13.21 Toroid.reconfigure :default @14:51:13.27 Toroid.seek :clear @14:51:15.24 Pressurizing cartridge to 26psi above 16.3psia @14:51:15.25 SamplePump.setPosition! 0ml @14:51:15.29 Intake.open @14:51:15.99 Bypass.close @14:51:16.71 Exhaust.close @14:51:17.52 Pressure.reconfigure :default @14:51:17.57 Pressure.hold @14:51:17.74 SamplePump.reconfigure :charge @14:51:17.81 SamplePump.seek 2.3ml,42 seconds @14:51:27.66 Pressure.coast @14:51:27.72 Intake.close @14:51:28.52 Pressurized cartridge with 0.453ml to 26.6psi @14:51:28.53 Isolated @39.5psia (23.2psi) @14:51:28.54 Checking for cartridge leaks from 39.5psia @14:51:28.57 Waiting up to 20 seconds for cartridge pressure to stabilize +/-0.75psi @14:51:33.62 Cartridge pressure fell 1% to 38.9psia @14:51:33.70 Sampling 1000.0ml @14:51:33.71 SamplePump.setPosition! 0ml @14:51:33.76 Exhaust.open @14:51:34.46 Intake.open @14:51:35.35 Pressure.reconfigure :default @14:51:35.41 Pressure.hold @14:51:35.52 Sea 1.7m deep (17.1psia) @14:51:35.65 SamplePump.reconfigure :sample @14:51:35.72 SamplePump.seek 1000ml,1:23:53 @14:51:38.39 Cartridge 54 sampling 1/1000ml at 0.58ml/s with 24.6psi vacuum @14:52:38.39 Cartridge 54 sampling 35/1000ml at 0.54ml/s with 19.3psi vacuum @14:53:38.39 Cartridge 54 sampling 67/1000ml at 0.52ml/s with 23.7psi vacuum @14:54:38.39 Cartridge 54 sampling 98/1000ml at 0.51ml/s with 23.7psi vacuum @14:55:38.39 Cartridge 54 sampling 128/1000ml at 0.48ml/s with 21.5psi vacuum @14:56:38.39 Cartridge 54 sampling 157/1000ml at 0.43ml/s with 23.0psi vacuum @14:57:38.39 Cartridge 54 sampling 184/1000ml at 0.47ml/s with 27.2psi vacuum @14:58:38.39 Cartridge 54 sampling 210/1000ml at 0.43ml/s with 26.5psi vacuum 1.7m deep (17.3psia) @14:59:38.39 Cartridge 54 sampling 235/1000ml at 0.40ml/s with 22.4psi vacuum @15:00:38.39 Cartridge 54 sampling 259/1000ml at 0.42ml/s with 24.1psi vacuum @15:01:38.39 Cartridge 54 sampling 281/1000ml at 0.35ml/s with 23.5psi vacuum @15:02:38.39 Cartridge 54 sampling 302/1000ml at 0.33ml/s with 21.9psi vacuum @15:03:38.39 Cartridge 54 sampling 321/1000ml at 0.31ml/s with 25.4psi vacuum @15:04:38.39 Cartridge 54 sampling 338/1000ml at 0.29ml/s with 25.3psi vacuum @15:05:38.39 Cartridge 54 sampling 354/1000ml at 0.27ml/s with 25.2psi vacuum @15:06:38.39 Cartridge 54 sampling 369/1000ml at 0.21ml/s with 24.1psi vacuum @15:07:38.39 Cartridge 54 sampling 383/1000ml at 0.23ml/s with 24.8psi vacuum @15:08:38.39 Cartridge 54 sampling 396/1000ml at 0.20ml/s with 24.2psi vacuum @15:09:38.39 Cartridge 54 sampling 408/1000ml at 0.21ml/s with 25.7psi vacuum @15:10:38.39 Cartridge 54 sampling 420/1000ml at 0.20ml/s with 26.9psi vacuum @15:11:22.03 Flow averaged 0.36ml/s over 19:43 @15:11:22.06 Waiting up to 12 seconds for vacuum to reduce from 27.4 to 18.0psi @15:11:22.76 Relieved excess vacuum in 4.2 seconds @15:11:22.78 SamplePump.seek 1000ml,48:07 @15:11:32.50 Flow estimate reduced to 0.29ml/s @15:11:32.53 Waiting up to 12 seconds for vacuum to reduce from 27.4 to 18.0psi @15:11:33.23 Relieved excess vacuum in 7.4 seconds @15:11:33.25 SamplePump.seek 1000ml,47:58 @15:11:38.38 Cartridge 54 sampling 432/1000ml at 0.20ml/s with 29.2psi vacuum @15:12:05.51 Flow averaged 0.25ml/s over 26 seconds @15:12:05.54 Waiting up to 14 seconds for vacuum to reduce from 28.5 to 18.0psi @15:12:06.24 Relieved excess vacuum in 7.7 seconds @15:12:06.26 SamplePump.seek 1000ml,47:26 @15:12:15.99 Flow estimate reduced to 0.20ml/s @15:12:16.03 Waiting up to 13 seconds for vacuum to reduce from 28.1 to 18.0psi @15:12:16.73 Relieved excess vacuum in 7.4 seconds @15:12:16.75 SamplePump.seek 1000ml,47:16 @15:12:23.32 Flow estimate reduced to 0.16ml/s @15:12:23.34 Intake.close @15:12:23.38 Exhaust.close @15:12:23.55 Toroid.reconfigure :hold @15:12:23.63 Toroid.seek :bypass @15:12:25.25 Toroid.reconfigure :default @15:12:25.32 Toroid.seek :clear @15:12:26.94 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @15:12:26.95 Pressure.coast @15:12:27.13 Sampled 440.4ml @15:12:29.23 -> Cmd.startProcessing @15:12:31.08 SPR.command \"read_sequences\" @15:12:31.81 SPR.command \"stats_on\" @15:12:31.85 SPR.command \"start 0 1\" @15:12:33.86 Begun log /var/log/esp/spr19aug1615h.spr @15:12:34.66 Handoff.select :waste @15:12:34.84 Archive.seek :empty @15:12:42.01 Syringe tare is 20% of full scale @15:12:52.56 PinPort.seek :cartridge @15:12:57.12 Lysis1.seek 1350ul @15:12:59.59 Lysis2.seek 1700ul @15:13:02.69 Plunge.seek :reagent @15:13:03.54 Evacuating puck with filter bubble point of 50psi @15:13:03.56 PinPort.seek :cartridge @15:13:03.64 Handoff.select :waste @15:13:10.97 Air pumping 1 strokes to reach 8psi @15:13:10.99 Air.reconfigure :gulp @15:13:11.08 Air.seek :tVent @15:13:12.88 0.7psi after gulp @15:13:12.89 Air stroke #1 of 1 @15:13:12.91 Air.reconfigure :pressurize @15:13:12.99 Air.seek :pressurized @15:13:25.83 0.5psi after pressurize @15:13:25.84 Air.reconfigure :compress @15:13:25.92 Air.seek :evac @15:13:28.58 1.2psi after compress @15:13:42.46 0.2psi after compress (stable) @15:13:42.58 at 0.2psi Opened to waste @15:13:42.59 Handoff.select :blocked @15:13:42.76 Air pumping 10 strokes to reach 50psi @15:13:42.78 Air.reconfigure :gulp @15:13:42.86 Air.seek :tVent @15:13:52.77 3.1psi after gulp @15:13:52.78 Air stroke #1 of 10 @15:13:52.80 Air.reconfigure :pressurize @15:13:52.88 Air.seek :pressurized @15:14:05.72 4.5psi after pressurize @15:14:05.73 Air.reconfigure :compress @15:14:05.81 Air.seek :evac @15:14:08.48 4.8psi after compress @15:14:55.44 26.8psi after compress (stable) @15:14:55.47 Air.reconfigure :gulp @15:14:55.55 Air.seek :tVent @15:15:05.44 29.1psi after gulp @15:15:05.45 Air stroke #2 of 10 @15:15:05.47 Air.reconfigure :pressurize @15:15:05.56 Air.seek :pressurized @15:15:18.40 28.0psi after pressurize @15:15:18.41 Air.reconfigure :compress @15:15:18.49 Air.seek :evac @15:15:21.17 26.7psi after compress @15:16:05.35 43.3psi after compress (stable) @15:16:05.37 Air.reconfigure :gulp @15:16:05.45 Air.seek :tVent @15:16:15.36 47.0psi after gulp @15:16:15.38 Air stroke #3 of 10 @15:16:15.40 Air.reconfigure :pressurize @15:16:15.48 Air.seek :pressurized @15:16:28.33 45.4psi after pressurize @15:16:28.34 Air.reconfigure :compress @15:16:28.42 Air.seek :evac @15:16:31.09 42.4psi after compress @15:16:49.18 Reached 50.0 of 50.0psi after pumping 6230ul (4.00 strokes) @15:16:49.19 Handoff.select :waste @15:17:15.89 delay 30 seconds @15:17:45.92 Handoff.select :blocked @15:18:34.86 Handoff.select :waste @15:18:34.98 PSI at @7.11psi at evacEnd @15:18:34.99 Handoff.select :blocked @15:18:35.11 Air.reconfigure :gulp @15:18:35.22 Air.seek :tVent @15:18:52.32 Stable @4.5psi after Handoff blocked @15:18:52.40 Air pumping 10 strokes to reach 34psi @15:18:52.41 Air stroke #1 of 10 @15:18:52.44 Air.reconfigure :pressurize @15:18:52.53 Air.seek :pressurized @15:19:05.38 5.6psi after pressurize @15:19:05.40 Air.reconfigure :compress @15:19:05.47 Air.seek :evac @15:19:08.14 5.7psi after compress @15:19:41.23 18.8psi after compress (stable) @15:19:41.25 Air.reconfigure :gulp @15:19:41.33 Air.seek :tVent @15:19:51.24 20.4psi after gulp @15:19:51.25 Air stroke #2 of 10 @15:19:51.27 Air.reconfigure :pressurize @15:19:51.35 Air.seek :pressurized @15:20:04.19 20.3psi after pressurize @15:20:04.21 Air.reconfigure :compress @15:20:04.28 Air.seek :evac @15:20:06.95 19.8psi after compress @15:20:53.03 27.2psi after compress (stable) @15:20:53.06 Air.reconfigure :gulp @15:20:53.13 Air.seek :tVent @15:21:03.03 29.6psi after gulp @15:21:03.06 Air stroke #3 of 10 @15:21:03.08 Air.reconfigure :pressurize @15:21:03.17 Air.seek :pressurized @15:21:16.01 29.4psi after pressurize @15:21:16.02 Air.reconfigure :compress @15:21:16.10 Air.seek :evac @15:21:18.77 28.1psi after compress @15:21:54.91 Reached 34.5 of 34.5psi after pumping 6230ul (4.00 strokes) @15:21:54.92 Handoff.select :waste @15:22:13.72 delay 30 seconds @15:22:43.75 Handoff.select :blocked @15:23:17.59 Handoff.select :waste @15:23:17.70 PSI at @6.71psi at evacEnd @15:23:17.72 Air.reconfigure :default @15:23:17.84 Air.seek :fVent @15:23:19.27 delay 5 seconds @15:23:24.30 Seawater evacuated, Presure above/below filter released. Lysis begins @15:23:24.37 Lysis1.reconfigure :slow @15:23:24.44 Lysis1.seek 1050ul @15:23:54.48 delay 5 seconds @15:23:59.50 Handoff.select :blocked @15:23:59.66 Lysis1.seek 450ul @15:24:59.65 delay 3 seconds @15:25:02.72 Air.reconfigure to mix into 1.37806 parts Lysis1 @15:25:03.21 Air.seek :evac @15:25:03.25 Lysis1.seek 300ul @15:25:18.39 Air.reconfigure :default @15:25:18.48 Air.seek :full @15:25:32.70 Lysis1.seek :empty @15:26:02.81 Lysis Delivered. Syringe pressure @36.4psi @15:26:02.85 PuckHeater.seek 84.1C @15:26:50.32 PuckHeater.hold 15:00,84.1C @15:41:49.16 Lysis complete. Syringe pressure @40.2psi @15:41:49.17 Handoff.select :blocked @15:41:49.27 Lysis1.reconfigure :halfSpeed @15:41:49.33 Lysis1.seek 200ul @15:41:53.14 delay 1 second @15:41:54.16 Lysis1.seek :empty @15:41:57.98 Initial AirS pressure @43.7psi @15:41:58.04 Lysis1.reconfigure :extract @15:41:58.18 Lysis1.seek 900ul,10:00 @15:41:59.32 Air pumping 10 strokes to reach 24psi @15:41:59.33 Air stroke #1 of 10 @15:41:59.35 Air.reconfigure :pressurize @15:41:59.43 Air.seek :pressurized @15:42:12.27 12.9psi after pressurize @15:42:12.28 Air.reconfigure :compress @15:42:12.38 Air.seek :evac @15:42:15.05 20.7psi after compress @15:42:29.30 18.7psi after compress (stable) @15:42:29.32 Air.reconfigure :gulp @15:42:29.40 Air.seek :tVent @15:42:39.30 19.0psi after gulp @15:42:39.31 Air stroke #2 of 10 @15:42:39.33 Air.reconfigure :pressurize @15:42:39.41 Air.seek :pressurized @15:42:52.24 18.4psi after pressurize @15:42:52.25 Air.reconfigure :compress @15:42:52.33 Air.seek :evac @15:42:55.01 20.1psi after compress @15:43:08.92 18.6psi after compress (stable) @15:43:08.94 Air.reconfigure :gulp @15:43:09.01 Air.seek :tVent @15:43:18.92 18.7psi after gulp @15:43:18.93 Air stroke #3 of 10 @15:43:18.95 Air.reconfigure :pressurize @15:43:19.02 Air.seek :pressurized @15:43:31.88 18.7psi after pressurize @15:43:31.89 Air.reconfigure :compress @15:43:31.97 Air.seek :evac @15:43:34.65 19.3psi after compress @15:43:48.55 18.5psi after compress (stable) @15:43:48.56 Air.reconfigure :gulp @15:43:48.64 Air.seek :tVent @15:43:58.53 19.2psi after gulp @15:43:58.54 Air stroke #4 of 10 @15:43:58.56 Air.reconfigure :pressurize @15:43:58.65 Air.seek :pressurized @15:44:11.48 18.5psi after pressurize @15:44:11.49 Air.reconfigure :compress @15:44:11.58 Air.seek :evac @15:44:14.25 19.1psi after compress @15:44:28.19 18.8psi after compress (stable) @15:44:28.21 Air.reconfigure :gulp @15:44:28.28 Air.seek :tVent @15:44:38.55 18.5psi after gulp @15:44:38.56 Air stroke #5 of 10 @15:44:38.57 Air.reconfigure :pressurize @15:44:38.65 Air.seek :pressurized @15:44:51.49 18.5psi after pressurize @15:44:51.51 Air.reconfigure :compress @15:44:51.59 Air.seek :evac @15:44:54.25 19.0psi after compress @15:45:08.15 18.8psi after compress (stable) @15:45:08.17 Air.reconfigure :gulp @15:45:08.26 Air.seek :tVent @15:45:18.17 19.2psi after gulp @15:45:18.18 Air stroke #6 of 10 @15:45:18.20 Air.reconfigure :pressurize @15:45:18.28 Air.seek :pressurized @15:45:31.11 18.8psi after pressurize @15:45:31.12 Air.reconfigure :compress @15:45:31.20 Air.seek :evac @15:45:33.88 18.8psi after compress @15:45:47.81 18.7psi after compress (stable) @15:45:47.82 Air.reconfigure :gulp @15:45:47.90 Air.seek :tVent @15:45:48.66 Reached 26.1 of 24.0psi after pumping 9345ul (6.00 strokes) @15:45:48.96 Lysis1 at 900ul @27.9psi @15:45:48.98 Syringe::PressureError in PROCESSING -- 27.9psi is out of 14.0..25.5 range -- Skipping SPR @15:45:49.00 SPR.command \"start 2 14\" @15:45:50.36 Handoff.select :waste @15:45:50.85 Ended log /var/log/esp/spr19aug1615h.spr @15:45:50.86 SPR.command \"stats_off\" @15:45:52.40 -> Cmd.stop @15:45:52.49 Handoff.select :close @15:45:52.62 Gate.power :heat,:OFF @15:45:52.64 Gate.power :cartridge,:OFF @15:45:52.72 Carousel.seek 54 @15:45:52.89 Plunge.seek :locked @15:45:53.73 PinPort.seek :clear @15:45:58.34 Archive.seek :clear @15:45:58.47 Air.reconfigure :default @15:45:58.60 Lysis1.reconfigure :default @15:45:58.72 Air.seek :clear @15:45:58.78 Lysis1.seek :clear @15:45:58.86 Lysis2.seek :clear @15:46:16.09 Archive.coast @15:46:16.14 Air.coast @15:46:16.19 Lysis1.coast @15:46:16.24 Lysis2.coast @15:46:16.29 Plunge.coast @15:46:16.34 SamplePump.coast @15:46:16.39 Toroid.coast @15:46:16.45 Carousel.coast @15:46:16.50 PinPort.coast @15:46:16.68 Gate.power :motor,:OFF @15:46:16.70 Gate.power :core,:OFF @15:46:16.72 Gate.power :analytic1,:OFF @15:46:16.74 Gate.power :analytic2,:OFF @15:46:16.76 Gate.power :analytic3,:OFF @15:46:16.78 Gate.power :main,:OFF @15:46:16.80 Safely stopped and ready to power off ##-- file closed 2019-08-16T20:03:26.921Z