INFO 2025-10-17 04:03:40,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251014T202022/202510142020_202510142031.nc4 file...
INFO 2025-10-17 04:03:40,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510142020_202510142031.nc4
INFO 2025-10-17 04:03:40,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251014T202022/202510142020_202510142031.nc4
INFO 2025-10-17 04:03:40,885Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:40,968Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,088Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,178Z lrauvNc4ToNetcdf.py createSeries():304 time     :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,288Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,381Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,460Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,520Z lrauvNc4ToNetcdf.py createSeries():304 time     :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,601Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,681Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,746Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,810Z lrauvNc4ToNetcdf.py createSeries():304 time     :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,909Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:41,969Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,035Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,097Z lrauvNc4ToNetcdf.py createSeries():304 time     :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes
INFO 2025-10-17 04:03:42,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2025-10-17 04:03:42,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2025-10-17 04:03:42,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2025-10-17 04:03:42,153Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2025-10-17 04:03:42,154Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:03:42,160Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:03:42,166Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:03:42,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_battery_charge empty so skipping
INFO 2025-10-17 04:03:42,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_battery_voltage empty so skipping
INFO 2025-10-17 04:03:42,182Z lrauvNc4ToNetcdf.py createSeries():304 platform_average_current:    1 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,184Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2025-10-17 04:03:42,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2025-10-17 04:03:42,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable sea_water_salinity empty so skipping
INFO 2025-10-17 04:03:42,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable sea_water_temperature empty so skipping
INFO 2025-10-17 04:03:42,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable mass_concentration_of_oxygen_in_sea_water empty so skipping
INFO 2025-10-17 04:03:42,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_sea_water_salinity empty so skipping
INFO 2025-10-17 04:03:42,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_sea_water_salinity empty so skipping
INFO 2025-10-17 04:03:42,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_sea_water_temperature empty so skipping
INFO 2025-10-17 04:03:42,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_sea_water_temperature empty so skipping
INFO 2025-10-17 04:03:42,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2025-10-17 04:03:42,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2025-10-17 04:03:42,207Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water:  121 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2025-10-17 04:03:42,214Z lrauvNc4ToNetcdf.py createSeries():304 platform_rudder_angle:  120 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2025-10-17 04:03:42,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:03:42,223Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable OutputChl empty so skipping
INFO 2025-10-17 04:03:42,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable Output470 empty so skipping
INFO 2025-10-17 04:03:42,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable Output650 empty so skipping
INFO 2025-10-17 04:03:42,229Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable VolumeScatCoeff117deg470nm empty so skipping
INFO 2025-10-17 04:03:42,231Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable VolumeScatCoeff117deg650nm empty so skipping
INFO 2025-10-17 04:03:42,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable ParticulateBackscatteringCoeff470nm empty so skipping
INFO 2025-10-17 04:03:42,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable ParticulateBackscatteringCoeff650nm empty so skipping
INFO 2025-10-17 04:03:42,235Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:03:42,237Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:03:42,280Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle:  120 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,331Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:03:42,352Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle:  120 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,428Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:03:42,470Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation:  120 v_t values found before 2025-10-14 20:20:00 and after 2025-10-14 20:31:00
INFO 2025-10-17 04:03:42,519Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:03:42,520Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251014T202022/202510142020_202510142031.nc4
INFO 2025-10-17 04:03:42,631Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 1357 vehicle dead reckoned longitude and latitude values
INFO 2025-10-17 04:03:42,744Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251014T202022/202510142020_202510142031.nc4
INFO 2025-10-17 04:03:42,744Z lrauvNc4ToNetcdf.py nudge_coords():800 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2025-10-17 04:03:42,746Z lrauvNc4ToNetcdf.py nudge_coords():821                  -            -            -         0      0.00              -              -                             -
INFO 2025-10-17 04:03:42,746Z lrauvNc4ToNetcdf.py nudge_coords():854    0:        0.375    0.0003193   -0.0000590       156      1.04          -6.22         -10.48 2025-10-14 20:23:43.435245037
INFO 2025-10-17 04:03:42,748Z lrauvNc4ToNetcdf.py nudge_coords():854    1:        0.327    0.0003382   -0.0000900       189      1.27          -7.81         -13.15 2025-10-14 20:24:59.918642044
INFO 2025-10-17 04:03:42,750Z lrauvNc4ToNetcdf.py nudge_coords():854    2:        0.352    0.0015652   -0.0002648       822      5.53          -5.27          -8.88 2025-10-14 20:30:31.998888016
INFO 2025-10-17 04:03:42,753Z lrauvNc4ToNetcdf.py nudge_coords():885    4:            -            -            -       189      1.27              -              -
INFO 2025-10-17 04:03:42,753Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 1356
INFO 2025-10-17 04:03:42,785Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251014T192036/20251014T213148/data.csv
INFO 2025-10-17 04:03:42,822Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database
INFO 2025-10-17 04:03:42,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2025-10-17 04:03:43,240Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S'
INFO 2025-10-17 04:03:43,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251014T202022/202510142020_202510142031_2S_scieng.nc