INFO 2025-10-17 04:03:06,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T133000/202510121330_202510130423.nc4 file... INFO 2025-10-17 04:03:06,204Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510121330_202510130423.nc4 INFO 2025-10-17 04:03:06,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T133000/202510121330_202510130423.nc4 INFO 2025-10-17 04:03:06,828Z lrauvNc4ToNetcdf.py createSeries():304 latitude : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:07,065Z lrauvNc4ToNetcdf.py createSeries():304 longitude: 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:07,328Z lrauvNc4ToNetcdf.py createSeries():304 depth : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:07,593Z lrauvNc4ToNetcdf.py createSeries():304 time : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:07,868Z lrauvNc4ToNetcdf.py createSeries():304 latitude : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:08,142Z lrauvNc4ToNetcdf.py createSeries():304 longitude: 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:08,427Z lrauvNc4ToNetcdf.py createSeries():304 depth : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:08,698Z lrauvNc4ToNetcdf.py createSeries():304 time : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:08,941Z lrauvNc4ToNetcdf.py createSeries():304 latitude : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:09,219Z lrauvNc4ToNetcdf.py createSeries():304 longitude: 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:09,492Z lrauvNc4ToNetcdf.py createSeries():304 depth : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:09,764Z lrauvNc4ToNetcdf.py createSeries():304 time : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:10,025Z lrauvNc4ToNetcdf.py createSeries():304 latitude : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:10,248Z lrauvNc4ToNetcdf.py createSeries():304 longitude: 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:10,458Z lrauvNc4ToNetcdf.py createSeries():304 depth : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:10,676Z lrauvNc4ToNetcdf.py createSeries():304 time : 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:10,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes INFO 2025-10-17 04:03:10,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2025-10-17 04:03:10,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2025-10-17 04:03:10,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2025-10-17 04:03:10,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2025-10-17 04:03:10,912Z lrauvNc4ToNetcdf.py createSeries():304 longitude: 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:11,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2025-10-17 04:03:11,042Z lrauvNc4ToNetcdf.py createSeries():304 latitude : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:11,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2025-10-17 04:03:11,182Z lrauvNc4ToNetcdf.py createSeries():304 depth : 19 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:11,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2025-10-17 04:03:11,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2025-10-17 04:03:11,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2025-10-17 04:03:11,304Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2025-10-17 04:03:11,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2025-10-17 04:03:11,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2025-10-17 04:03:11,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2025-10-17 04:03:11,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter mass_concentration_of_oxygen_in_sea_water renaming to mass_concentration_of_oxygen_in_sea_water INFO 2025-10-17 04:03:11,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity INFO 2025-10-17 04:03:11,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity INFO 2025-10-17 04:03:11,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature INFO 2025-10-17 04:03:11,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature INFO 2025-10-17 04:03:11,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2025-10-17 04:03:11,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2025-10-17 04:03:11,522Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water: 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:11,601Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2025-10-17 04:03:11,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2025-10-17 04:03:11,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2025-10-17 04:03:11,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2025-10-17 04:03:11,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2025-10-17 04:03:11,818Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2025-10-17 04:03:11,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm INFO 2025-10-17 04:03:11,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm INFO 2025-10-17 04:03:11,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm INFO 2025-10-17 04:03:11,948Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm INFO 2025-10-17 04:03:11,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water INFO 2025-10-17 04:03:11,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water INFO 2025-10-17 04:03:11,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_direction_navigation_frame empty so skipping INFO 2025-10-17 04:03:11,972Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_speed_navigation_frame empty so skipping INFO 2025-10-17 04:03:12,049Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle: 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:12,243Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2025-10-17 04:03:12,319Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle: 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:12,541Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2025-10-17 04:03:12,616Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation: 20 v_t values found before 2025-10-12 13:30:00 and after 2025-10-13 04:23:00 INFO 2025-10-17 04:03:12,812Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2025-10-17 04:03:12,813Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T133000/202510121330_202510130423.nc4 INFO 2025-10-17 04:03:13,227Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 132097 vehicle dead reckoned longitude and latitude values INFO 2025-10-17 04:03:13,493Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 12 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T133000/202510121330_202510130423.nc4 INFO 2025-10-17 04:03:13,493Z lrauvNc4ToNetcdf.py nudge_coords():800 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-10-17 04:03:13,495Z lrauvNc4ToNetcdf.py nudge_coords():821 - - - 96 0.64 - - - INFO 2025-10-17 04:03:13,497Z lrauvNc4ToNetcdf.py nudge_coords():854 0: 0.450 0.0000800 -0.0000522 131 0.91 -5.79 -10.68 2025-10-12 13:31:33.191132069 INFO 2025-10-17 04:03:13,500Z lrauvNc4ToNetcdf.py nudge_coords():854 1: 0.383 0.0001953 -0.0003457 595 4.35 -7.98 -14.74 2025-10-12 13:35:54.451122046 INFO 2025-10-17 04:03:13,503Z lrauvNc4ToNetcdf.py nudge_coords():854 2: 0.388 0.0058042 -0.0227092 13373 90.04 -26.02 -46.73 2025-10-12 15:05:57.274921894 INFO 2025-10-17 04:03:13,507Z lrauvNc4ToNetcdf.py nudge_coords():854 3: 0.371 0.0020628 -0.0024493 2976 20.03 -12.57 -22.65 2025-10-12 15:25:59.704334021 INFO 2025-10-17 04:03:13,511Z lrauvNc4ToNetcdf.py nudge_coords():854 4: 0.365 0.0060900 -0.0273456 13372 90.04 -32.01 -56.28 2025-10-12 16:56:02.563538074 INFO 2025-10-17 04:03:13,517Z lrauvNc4ToNetcdf.py nudge_coords():854 5: 0.381 0.0002513 -0.0006185 603 4.17 -15.61 -27.47 2025-10-12 17:00:13.234066963 INFO 2025-10-17 04:03:13,520Z lrauvNc4ToNetcdf.py nudge_coords():854 6: 0.333 0.0094529 -0.0344768 13372 90.03 -40.94 -70.96 2025-10-12 18:30:15.736258030 INFO 2025-10-17 04:03:13,526Z lrauvNc4ToNetcdf.py nudge_coords():854 7: 0.386 0.0000895 -0.0049970 2970 20.03 -26.49 -46.23 2025-10-12 18:50:17.908970118 INFO 2025-10-17 04:03:13,529Z lrauvNc4ToNetcdf.py nudge_coords():854 8: 0.379 -0.0029098 -0.0385060 13372 90.04 -45.82 -79.24 2025-10-12 20:20:20.834278107 INFO 2025-10-17 04:03:13,535Z lrauvNc4ToNetcdf.py nudge_coords():854 9: 0.382 -0.0231007 -0.0834635 61348 414.16 -19.93 -37.34 2025-10-13 03:14:30.791075945 INFO 2025-10-17 04:03:13,545Z lrauvNc4ToNetcdf.py nudge_coords():854 10: 0.370 0.0020530 -0.0043385 2428 17.33 -24.59 -46.39 2025-10-13 03:31:50.931308985 INFO 2025-10-17 04:03:13,549Z lrauvNc4ToNetcdf.py nudge_coords():885 12: - - - 7460 51.26 - - INFO 2025-10-17 04:03:13,549Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 132096 INFO 2025-10-17 04:03:13,599Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251012T123000/20251013T052307/data.csv INFO 2025-10-17 04:03:13,652Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database INFO 2025-10-17 04:03:13,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'salinity', 'temperature', 'mass_concentration_of_oxygen_in_sea_water', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2025-10-17 04:03:14,414Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S' INFO 2025-10-17 04:03:14,789Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T133000/202510121330_202510130423_2S_scieng.nc