INFO 2025-10-17 04:02:54,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T043128/202510120431_202510120439.nc4 file...
INFO 2025-10-17 04:02:54,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510120431_202510120439.nc4
INFO 2025-10-17 04:02:55,332Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T043128/202510120431_202510120439.nc4
INFO 2025-10-17 04:02:55,401Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:55,583Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:55,761Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:55,889Z lrauvNc4ToNetcdf.py createSeries():304 time     :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:55,980Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:56,127Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:56,302Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:56,491Z lrauvNc4ToNetcdf.py createSeries():304 time     :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:56,678Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:56,861Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,045Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,232Z lrauvNc4ToNetcdf.py createSeries():304 time     :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,413Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,585Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,761Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:57,936Z lrauvNc4ToNetcdf.py createSeries():304 time     :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes
INFO 2025-10-17 04:02:58,048Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2025-10-17 04:02:58,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2025-10-17 04:02:58,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2025-10-17 04:02:58,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2025-10-17 04:02:58,057Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,061Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:58,062Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:58,067Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:58,080Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_battery_charge empty so skipping
INFO 2025-10-17 04:02:58,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_battery_voltage empty so skipping
INFO 2025-10-17 04:02:58,087Z lrauvNc4ToNetcdf.py createSeries():304 platform_average_current:    1 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2025-10-17 04:02:58,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_buoyancy_position empty so skipping
INFO 2025-10-17 04:02:58,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable sea_water_salinity empty so skipping
INFO 2025-10-17 04:02:58,097Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable sea_water_temperature empty so skipping
INFO 2025-10-17 04:02:58,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable mass_concentration_of_oxygen_in_sea_water empty so skipping
INFO 2025-10-17 04:02:58,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_sea_water_salinity empty so skipping
INFO 2025-10-17 04:02:58,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_sea_water_salinity empty so skipping
INFO 2025-10-17 04:02:58,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_sea_water_temperature empty so skipping
INFO 2025-10-17 04:02:58,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_sea_water_temperature empty so skipping
INFO 2025-10-17 04:02:58,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_elevator_angle empty so skipping
INFO 2025-10-17 04:02:58,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable platform_mass_position empty so skipping
INFO 2025-10-17 04:02:58,110Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2025-10-17 04:02:58,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2025-10-17 04:02:58,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:02:58,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable OutputChl empty so skipping
INFO 2025-10-17 04:02:58,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable Output470 empty so skipping
INFO 2025-10-17 04:02:58,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable Output650 empty so skipping
INFO 2025-10-17 04:02:58,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable VolumeScatCoeff117deg470nm empty so skipping
INFO 2025-10-17 04:02:58,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable VolumeScatCoeff117deg650nm empty so skipping
INFO 2025-10-17 04:02:58,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable ParticulateBackscatteringCoeff470nm empty so skipping
INFO 2025-10-17 04:02:58,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable ParticulateBackscatteringCoeff650nm empty so skipping
INFO 2025-10-17 04:02:58,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:02:58,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2025-10-17 04:02:58,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_direction_navigation_frame empty so skipping
INFO 2025-10-17 04:02:58,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_speed_navigation_frame empty so skipping
INFO 2025-10-17 04:02:58,189Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,277Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:58,330Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,419Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:58,463Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation:   57 v_t values found before 2025-10-12 04:31:00 and after 2025-10-12 04:39:00
INFO 2025-10-17 04:02:58,542Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:58,542Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T043128/202510120431_202510120439.nc4
INFO 2025-10-17 04:02:58,715Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 1109 vehicle dead reckoned longitude and latitude values
INFO 2025-10-17 04:02:58,841Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 3 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T043128/202510120431_202510120439.nc4
INFO 2025-10-17 04:02:58,841Z lrauvNc4ToNetcdf.py nudge_coords():800 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2025-10-17 04:02:58,842Z lrauvNc4ToNetcdf.py nudge_coords():821                  -            -            -         0      0.00              -              -                             -
INFO 2025-10-17 04:02:58,843Z lrauvNc4ToNetcdf.py nudge_coords():854    0:        0.379    0.0002103   -0.0021143       963      6.87         -32.74         -57.05 2025-10-12 04:38:21.851330042
INFO 2025-10-17 04:02:58,845Z lrauvNc4ToNetcdf.py nudge_coords():854    1:        0.406    0.0000252   -0.0002098        80      0.56         -39.61         -69.05 2025-10-12 04:38:56.056238890
INFO 2025-10-17 04:02:58,846Z lrauvNc4ToNetcdf.py nudge_coords():885    3:            -            -            -        65      0.46              -              -
INFO 2025-10-17 04:02:58,846Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 1108
INFO 2025-10-17 04:02:58,879Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251012T033128/20251012T053924/data.csv
INFO 2025-10-17 04:02:58,980Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database
INFO 2025-10-17 04:02:58,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_average_current', 'PAR', 'control_inputs_rudder_angle', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2025-10-17 04:02:59,110Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S'
INFO 2025-10-17 04:02:59,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251012T043128/202510120431_202510120439_2S_scieng.nc