INFO 2025-10-17 04:02:46,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T133000/202510111330_202510120431.nc4 file...
INFO 2025-10-17 04:02:46,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510111330_202510120431.nc4
INFO 2025-10-17 04:02:46,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T133000/202510111330_202510120431.nc4
INFO 2025-10-17 04:02:47,072Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:47,315Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:47,599Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:47,859Z lrauvNc4ToNetcdf.py createSeries():304 time     :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:48,084Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:48,287Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:48,527Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:48,759Z lrauvNc4ToNetcdf.py createSeries():304 time     :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:48,973Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:49,220Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:49,465Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:49,714Z lrauvNc4ToNetcdf.py createSeries():304 time     :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:49,958Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,205Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,457Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,710Z lrauvNc4ToNetcdf.py createSeries():304 time     :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes
INFO 2025-10-17 04:02:50,914Z lrauvNc4ToNetcdf.py createSeries():304 time_fix :    1 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2025-10-17 04:02:50,923Z lrauvNc4ToNetcdf.py createSeries():304 latitude_fix:    1 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2025-10-17 04:02:50,931Z lrauvNc4ToNetcdf.py createSeries():304 longitude_fix:    1 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:50,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2025-10-17 04:02:50,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:50,962Z lrauvNc4ToNetcdf.py createSeries():304 longitude:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:51,087Z lrauvNc4ToNetcdf.py createSeries():304 latitude :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:51,204Z lrauvNc4ToNetcdf.py createSeries():304 depth    :   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:51,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2025-10-17 04:02:51,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2025-10-17 04:02:51,336Z lrauvNc4ToNetcdf.py createSeries():304 platform_average_current:    1 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,342Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2025-10-17 04:02:51,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2025-10-17 04:02:51,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity
INFO 2025-10-17 04:02:51,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature
INFO 2025-10-17 04:02:51,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter mass_concentration_of_oxygen_in_sea_water renaming to mass_concentration_of_oxygen_in_sea_water
INFO 2025-10-17 04:02:51,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity
INFO 2025-10-17 04:02:51,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity
INFO 2025-10-17 04:02:51,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature
INFO 2025-10-17 04:02:51,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature
INFO 2025-10-17 04:02:51,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2025-10-17 04:02:51,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2025-10-17 04:02:51,634Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2025-10-17 04:02:51,730Z lrauvNc4ToNetcdf.py createSeries():304 platform_rudder_angle:   67 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:51,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2025-10-17 04:02:51,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2025-10-17 04:02:51,871Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter OutputChl renaming to chl
INFO 2025-10-17 04:02:51,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2025-10-17 04:02:51,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2025-10-17 04:02:52,013Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm
INFO 2025-10-17 04:02:52,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm
INFO 2025-10-17 04:02:52,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm
INFO 2025-10-17 04:02:52,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm
INFO 2025-10-17 04:02:52,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:52,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:52,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_direction_navigation_frame empty so skipping
INFO 2025-10-17 04:02:52,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_speed_navigation_frame empty so skipping
INFO 2025-10-17 04:02:52,247Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:52,470Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:52,553Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:52,762Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:52,845Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation:   66 v_t values found before 2025-10-11 13:30:00 and after 2025-10-12 04:31:00
INFO 2025-10-17 04:02:53,053Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:53,054Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T133000/202510111330_202510120431.nc4
INFO 2025-10-17 04:02:53,481Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 132994 vehicle dead reckoned longitude and latitude values
INFO 2025-10-17 04:02:53,681Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 18 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T133000/202510111330_202510120431.nc4
INFO 2025-10-17 04:02:53,682Z lrauvNc4ToNetcdf.py nudge_coords():800 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2025-10-17 04:02:53,684Z lrauvNc4ToNetcdf.py nudge_coords():821                  -            -            -      1393      9.42              -              -                             -
INFO 2025-10-17 04:02:53,685Z lrauvNc4ToNetcdf.py nudge_coords():854    0:        0.381    0.0000762   -0.0003412       304      2.29         -11.96         -27.56 2025-10-11 13:41:43.420234919
INFO 2025-10-17 04:02:53,689Z lrauvNc4ToNetcdf.py nudge_coords():854    1:        0.390    0.0050731   -0.0157377     13996     94.35         -14.03         -30.91 2025-10-11 15:16:04.571124077
INFO 2025-10-17 04:02:53,695Z lrauvNc4ToNetcdf.py nudge_coords():854    2:        0.375    0.0000143   -0.0000762       159      1.19          -5.40         -11.89 2025-10-11 15:17:16.167334080
INFO 2025-10-17 04:02:53,698Z lrauvNc4ToNetcdf.py nudge_coords():854    3:        0.375    0.0067566   -0.0122952     14153     95.40         -11.36         -23.88 2025-10-11 16:52:40.875216961
INFO 2025-10-17 04:02:53,704Z lrauvNc4ToNetcdf.py nudge_coords():854    4:        0.431   -0.0001387   -0.0004045       675      4.74          -7.53         -15.83 2025-10-11 16:57:25.367331982
INFO 2025-10-17 04:02:53,708Z lrauvNc4ToNetcdf.py nudge_coords():854    5:        0.383    0.0056599   -0.0145271     14691     99.02         -13.48         -27.19 2025-10-11 18:36:26.759219885
INFO 2025-10-17 04:02:53,714Z lrauvNc4ToNetcdf.py nudge_coords():854    6:        0.382   -0.0014935   -0.0035948      2899     20.08         -16.34         -33.17 2025-10-11 18:56:32.151876926
INFO 2025-10-17 04:02:53,718Z lrauvNc4ToNetcdf.py nudge_coords():854    7:        0.365   -0.0046459   -0.0151578     14578     98.25         -14.64         -28.59 2025-10-11 20:34:47.806490898
INFO 2025-10-17 04:02:53,723Z lrauvNc4ToNetcdf.py nudge_coords():854    8:        0.417   -0.0040318   -0.0018540      2895     20.17          -8.70         -17.04 2025-10-11 20:54:58.171917915
INFO 2025-10-17 04:02:53,727Z lrauvNc4ToNetcdf.py nudge_coords():854    9:        0.379   -0.0110640   -0.0121722     13986     94.25         -12.78         -23.93 2025-10-11 22:29:13.739240885
INFO 2025-10-17 04:02:53,733Z lrauvNc4ToNetcdf.py nudge_coords():854   10:        0.368   -0.0026877   -0.0009738      2843     20.19          -4.76          -8.94 2025-10-11 22:49:25.747409105
INFO 2025-10-17 04:02:53,736Z lrauvNc4ToNetcdf.py nudge_coords():854   11:        0.344   -0.0031057   -0.0112029     14589     98.31         -11.76         -21.12 2025-10-12 00:27:44.719455957
INFO 2025-10-17 04:02:53,741Z lrauvNc4ToNetcdf.py nudge_coords():854   12:        0.375    0.0001723   -0.0013258      2851     20.06          -6.81         -12.25 2025-10-12 00:47:48.467396975
INFO 2025-10-17 04:02:53,745Z lrauvNc4ToNetcdf.py nudge_coords():854   13:        0.377    0.0047298   -0.0125741     14179     95.63         -14.06         -24.37 2025-10-12 02:23:26.499308109
INFO 2025-10-17 04:02:53,751Z lrauvNc4ToNetcdf.py nudge_coords():854   14:        0.390    0.0027187   -0.0024445      2878     20.02         -13.01         -22.62 2025-10-12 02:43:28.151192904
INFO 2025-10-17 04:02:53,755Z lrauvNc4ToNetcdf.py nudge_coords():854   15:        0.385   -0.0027020   -0.0172910     14280     96.36         -19.22         -33.25 2025-10-12 04:19:49.887147903
INFO 2025-10-17 04:02:53,760Z lrauvNc4ToNetcdf.py nudge_coords():854   16:        0.380    0.0004540   -0.0028488      1584     11.19         -27.15         -47.16 2025-10-12 04:31:01.914963007
INFO 2025-10-17 04:02:53,764Z lrauvNc4ToNetcdf.py nudge_coords():885   18:            -            -            -        60      0.43              -              -
INFO 2025-10-17 04:02:53,764Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 132993
INFO 2025-10-17 04:02:53,821Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251011T123000/20251012T053128/data.csv
INFO 2025-10-17 04:02:53,912Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database
INFO 2025-10-17 04:02:53,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'salinity', 'temperature', 'mass_concentration_of_oxygen_in_sea_water', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2025-10-17 04:02:54,482Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S'
INFO 2025-10-17 04:02:54,705Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T133000/202510111330_202510120431_2S_scieng.nc