INFO 2025-10-17 04:02:34,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T021500/202510110215_202510111329.nc4 file...
INFO 2025-10-17 04:02:34,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510110215_202510111329.nc4
INFO 2025-10-17 04:02:39,545Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T021500/202510110215_202510111329.nc4
INFO 2025-10-17 04:02:39,622Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:39,853Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:40,067Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:40,286Z lrauvNc4ToNetcdf.py createSeries():304 time     :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:40,505Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:40,696Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:40,889Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:41,083Z lrauvNc4ToNetcdf.py createSeries():304 time     :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:41,288Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:41,502Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:41,695Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:41,896Z lrauvNc4ToNetcdf.py createSeries():304 time     :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:42,091Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:42,284Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:42,508Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:42,732Z lrauvNc4ToNetcdf.py createSeries():304 time     :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:42,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes
INFO 2025-10-17 04:02:42,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2025-10-17 04:02:42,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2025-10-17 04:02:42,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2025-10-17 04:02:42,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:42,928Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:43,034Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:43,166Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:43,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2025-10-17 04:02:43,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2025-10-17 04:02:43,277Z lrauvNc4ToNetcdf.py createSeries():304 platform_average_current:    1 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2025-10-17 04:02:43,293Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2025-10-17 04:02:43,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity
INFO 2025-10-17 04:02:43,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature
INFO 2025-10-17 04:02:43,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter mass_concentration_of_oxygen_in_sea_water renaming to mass_concentration_of_oxygen_in_sea_water
INFO 2025-10-17 04:02:43,310Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity
INFO 2025-10-17 04:02:43,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity
INFO 2025-10-17 04:02:43,318Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature
INFO 2025-10-17 04:02:43,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature
INFO 2025-10-17 04:02:43,325Z lrauvNc4ToNetcdf.py createSeries():304 platform_elevator_angle:   31 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2025-10-17 04:02:43,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2025-10-17 04:02:43,398Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water:  149 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2025-10-17 04:02:43,479Z lrauvNc4ToNetcdf.py createSeries():304 platform_rudder_angle:   17 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2025-10-17 04:02:43,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2025-10-17 04:02:43,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter OutputChl renaming to chl
INFO 2025-10-17 04:02:43,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2025-10-17 04:02:43,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2025-10-17 04:02:43,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm
INFO 2025-10-17 04:02:43,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm
INFO 2025-10-17 04:02:43,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm
INFO 2025-10-17 04:02:43,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm
INFO 2025-10-17 04:02:43,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:43,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:43,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_direction_navigation_frame empty so skipping
INFO 2025-10-17 04:02:43,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_speed_navigation_frame empty so skipping
INFO 2025-10-17 04:02:43,628Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle:  148 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:43,800Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:43,863Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle:  148 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:44,027Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:44,093Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation:  148 v_t values found before 2025-10-11 02:15:00 and after 2025-10-11 13:29:00
INFO 2025-10-17 04:02:44,246Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:44,247Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T021500/202510110215_202510111329.nc4
INFO 2025-10-17 04:02:44,601Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 99736 vehicle dead reckoned longitude and latitude values
INFO 2025-10-17 04:02:44,751Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 11 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T021500/202510110215_202510111329.nc4
INFO 2025-10-17 04:02:44,752Z lrauvNc4ToNetcdf.py nudge_coords():800 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2025-10-17 04:02:44,753Z lrauvNc4ToNetcdf.py nudge_coords():821                  -            -            -         0      0.00              -              -                             -
INFO 2025-10-17 04:02:44,755Z lrauvNc4ToNetcdf.py nudge_coords():854    0:        0.387   -0.0042223   -0.0059112     15087    101.66          -3.28         -10.77 2025-10-11 03:57:07.623065948
INFO 2025-10-17 04:02:44,761Z lrauvNc4ToNetcdf.py nudge_coords():854    1:        0.374    0.0031788   -0.0015170      2963     20.14          -4.23         -13.96 2025-10-11 04:17:16.455127001
INFO 2025-10-17 04:02:44,765Z lrauvNc4ToNetcdf.py nudge_coords():854    2:        0.385    0.0038622   -0.0032928     14986    100.98          -2.03          -6.04 2025-10-11 05:58:15.538939953
INFO 2025-10-17 04:02:44,771Z lrauvNc4ToNetcdf.py nudge_coords():854    3:        0.389    0.0033527    0.0004210      2952     20.05           1.31           3.89 2025-10-11 06:18:18.821990013
INFO 2025-10-17 04:02:44,774Z lrauvNc4ToNetcdf.py nudge_coords():854    4:        0.388    0.0077559   -0.0037832     14981    100.96          -2.57          -6.94 2025-10-11 07:59:16.549937010
INFO 2025-10-17 04:02:44,780Z lrauvNc4ToNetcdf.py nudge_coords():854    5:        0.388    0.0024930   -0.0000235      2853     20.02          -0.08          -0.22 2025-10-11 08:19:18.287009001
INFO 2025-10-17 04:02:44,783Z lrauvNc4ToNetcdf.py nudge_coords():854    6:        0.375    0.0037069   -0.0086985     15020    101.22          -6.29         -15.92 2025-10-11 10:00:31.827271938
INFO 2025-10-17 04:02:44,789Z lrauvNc4ToNetcdf.py nudge_coords():854    7:        0.381    0.0034035   -0.0013372      2847     20.04          -4.87         -12.36 2025-10-11 10:20:34.878442049
INFO 2025-10-17 04:02:44,793Z lrauvNc4ToNetcdf.py nudge_coords():854    8:        0.371    0.0087650   -0.0113547     15027    101.24          -8.65         -20.78 2025-10-11 12:01:49.495333910
INFO 2025-10-17 04:02:44,798Z lrauvNc4ToNetcdf.py nudge_coords():854    9:        0.387    0.0010052   -0.0020693      1790     12.49         -12.72         -30.69 2025-10-11 12:14:19.499532938
INFO 2025-10-17 04:02:44,803Z lrauvNc4ToNetcdf.py nudge_coords():885   11:            -            -            -     11229     75.66              -              -
INFO 2025-10-17 04:02:44,803Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 99735
INFO 2025-10-17 04:02:44,853Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251011T011500/20251011T142959/data.csv
INFO 2025-10-17 04:02:44,885Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database
INFO 2025-10-17 04:02:44,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'salinity', 'temperature', 'mass_concentration_of_oxygen_in_sea_water', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2025-10-17 04:02:45,232Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S'
INFO 2025-10-17 04:02:45,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251011T021500/202510110215_202510111329_2S_scieng.nc