INFO 2025-10-17 04:02:16,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1224 Reading /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251010T021500/202510100215_202510101329.nc4 file...
INFO 2025-10-17 04:02:16,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1225 After copying to /tmp/202510100215_202510101329.nc4
INFO 2025-10-17 04:02:17,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1227 Read file /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251010T021500/202510100215_202510101329.nc4
INFO 2025-10-17 04:02:17,170Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:17,383Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:17,604Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:17,842Z lrauvNc4ToNetcdf.py createSeries():304 time     :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,019Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,204Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,399Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,588Z lrauvNc4ToNetcdf.py createSeries():304 time     :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,767Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:18,951Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:19,139Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:19,329Z lrauvNc4ToNetcdf.py createSeries():304 time     :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:19,533Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:19,725Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:19,918Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,111Z lrauvNc4ToNetcdf.py createSeries():304 time     :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1240 Creating t variable of the time indexes
INFO 2025-10-17 04:02:20,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2025-10-17 04:02:20,277Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2025-10-17 04:02:20,282Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2025-10-17 04:02:20,285Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:20,296Z lrauvNc4ToNetcdf.py createSeries():304 longitude:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:20,388Z lrauvNc4ToNetcdf.py createSeries():304 latitude :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:20,464Z lrauvNc4ToNetcdf.py createSeries():304 depth    :  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2025-10-17 04:02:20,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2025-10-17 04:02:20,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2025-10-17 04:02:20,549Z lrauvNc4ToNetcdf.py createSeries():304 platform_average_current:    1 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2025-10-17 04:02:20,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2025-10-17 04:02:20,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity
INFO 2025-10-17 04:02:20,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature
INFO 2025-10-17 04:02:20,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter mass_concentration_of_oxygen_in_sea_water renaming to mass_concentration_of_oxygen_in_sea_water
INFO 2025-10-17 04:02:20,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_salinity renaming to bin_mean_sea_water_salinity
INFO 2025-10-17 04:02:20,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to bin_median_sea_water_salinity
INFO 2025-10-17 04:02:20,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_mean_sea_water_temperature renaming to bin_mean_sea_water_temperature
INFO 2025-10-17 04:02:20,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to bin_median_sea_water_temperature
INFO 2025-10-17 04:02:20,586Z lrauvNc4ToNetcdf.py createSeries():304 platform_elevator_angle:   47 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2025-10-17 04:02:20,613Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2025-10-17 04:02:20,625Z lrauvNc4ToNetcdf.py createSeries():304 downwelling_photosynthetic_photon_flux_in_sea_water:  148 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2025-10-17 04:02:20,684Z lrauvNc4ToNetcdf.py createSeries():304 platform_rudder_angle:   28 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,708Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2025-10-17 04:02:20,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2025-10-17 04:02:20,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter OutputChl renaming to chl
INFO 2025-10-17 04:02:20,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2025-10-17 04:02:20,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2025-10-17 04:02:20,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm
INFO 2025-10-17 04:02:20,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm
INFO 2025-10-17 04:02:20,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff470nm renaming to particulatebackscatteringcoeff470nm
INFO 2025-10-17 04:02:20,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter ParticulateBackscatteringCoeff650nm renaming to particulatebackscatteringcoeff650nm
INFO 2025-10-17 04:02:20,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_mean_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:20,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1324 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to bin_median_mass_concentration_of_chlorophyll_in_sea_water
INFO 2025-10-17 04:02:20,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_direction_navigation_frame empty so skipping
INFO 2025-10-17 04:02:20,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1281 Variable current_speed_navigation_frame empty so skipping
INFO 2025-10-17 04:02:20,812Z lrauvNc4ToNetcdf.py createSeries():304 platform_pitch_angle:  145 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:20,968Z lrauvNc4ToNetcdf.py createNav():569 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:21,031Z lrauvNc4ToNetcdf.py createSeries():304 platform_roll_angle:  145 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:21,196Z lrauvNc4ToNetcdf.py createNav():569 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:21,259Z lrauvNc4ToNetcdf.py createSeries():304 platform_orientation:  145 v_t values found before 2025-10-10 02:15:00 and after 2025-10-10 13:29:00
INFO 2025-10-17 04:02:21,421Z lrauvNc4ToNetcdf.py createNav():569 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2025-10-17 04:02:21,422Z lrauvNc4ToNetcdf.py nudge_coords():752 /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251010T021500/202510100215_202510101329.nc4
INFO 2025-10-17 04:02:21,769Z lrauvNc4ToNetcdf.py nudge_coords():760 Using 99920 vehicle dead reckoned longitude and latitude values
INFO 2025-10-17 04:02:22,029Z lrauvNc4ToNetcdf.py nudge_coords():786 Using 12 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251010T021500/202510100215_202510101329.nc4
INFO 2025-10-17 04:02:22,029Z lrauvNc4ToNetcdf.py nudge_coords():800 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2025-10-17 04:02:22,031Z lrauvNc4ToNetcdf.py nudge_coords():821                  -            -            -       859      5.79              -              -                             -
INFO 2025-10-17 04:02:22,032Z lrauvNc4ToNetcdf.py nudge_coords():854    0:        0.375    0.0023418   -0.0041180      2864     20.04         -20.07         -38.08 2025-10-10 02:40:50.287305117
INFO 2025-10-17 04:02:22,035Z lrauvNc4ToNetcdf.py nudge_coords():854    1:        0.374    0.0046136    0.0023183     15093    101.68           2.09           4.22 2025-10-10 04:22:31.663307905
INFO 2025-10-17 04:02:22,039Z lrauvNc4ToNetcdf.py nudge_coords():854    2:        0.385    0.0003187   -0.0031322      2929     20.12         -14.20         -28.85 2025-10-10 04:42:39.024132013
INFO 2025-10-17 04:02:22,042Z lrauvNc4ToNetcdf.py nudge_coords():854    3:        0.378    0.0030130    0.0039587     15063    101.48           3.33           7.23 2025-10-10 06:24:08.503213881
INFO 2025-10-17 04:02:22,046Z lrauvNc4ToNetcdf.py nudge_coords():854    4:        0.374   -0.0000483   -0.0002295       216      1.45         -13.52         -29.33 2025-10-10 06:25:35.908376932
INFO 2025-10-17 04:02:22,048Z lrauvNc4ToNetcdf.py nudge_coords():854    5:        0.375    0.0001663    0.0068865     15064    101.49           5.42          12.57 2025-10-10 08:07:05.595696926
INFO 2025-10-17 04:02:22,052Z lrauvNc4ToNetcdf.py nudge_coords():854    6:        0.391   -0.0006913   -0.0017853      2954     20.14          -7.06         -16.43 2025-10-10 08:27:14.091020107
INFO 2025-10-17 04:02:22,055Z lrauvNc4ToNetcdf.py nudge_coords():854    7:        0.383   -0.0014095    0.0088350     15001    101.08           6.51          16.20 2025-10-10 10:08:19.123126030
INFO 2025-10-17 04:02:22,059Z lrauvNc4ToNetcdf.py nudge_coords():854    8:        0.372   -0.0004647   -0.0009040      2957     20.03          -3.36          -8.36 2025-10-10 10:28:21.347328901
INFO 2025-10-17 04:02:22,062Z lrauvNc4ToNetcdf.py nudge_coords():854    9:        0.361   -0.0072453    0.0086889     15042    101.38           5.93          15.88 2025-10-10 12:09:44.239629984
INFO 2025-10-17 04:02:22,066Z lrauvNc4ToNetcdf.py nudge_coords():854   10:        0.367    0.0007785    0.0004855      2937     20.02           1.68           4.49 2025-10-10 12:29:45.919487
INFO 2025-10-17 04:02:22,070Z lrauvNc4ToNetcdf.py nudge_coords():885   12:            -            -            -      8940     60.22              -              -
INFO 2025-10-17 04:02:22,070Z lrauvNc4ToNetcdf.py nudge_coords():889 Points in final series = 99919
INFO 2025-10-17 04:02:22,121Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():627 http://odss.mbari.org/trackingdb/position/makai_ac/between/20251010T011500/20251010T142959/data.csv
INFO 2025-10-17 04:02:22,161Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():647 Found 0 position values from the Tracking database
INFO 2025-10-17 04:02:22,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1434 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'salinity', 'temperature', 'mass_concentration_of_oxygen_in_sea_water', 'bin_mean_sea_water_salinity', 'bin_median_sea_water_salinity', 'bin_mean_sea_water_temperature', 'bin_median_sea_water_temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'particulatebackscatteringcoeff470nm', 'particulatebackscatteringcoeff650nm', 'bin_mean_mass_concentration_of_chlorophyll_in_sea_water', 'bin_median_mass_concentration_of_chlorophyll_in_sea_water', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2025-10-17 04:02:23,147Z lrauvNc4ToNetcdf.py write_netcdf():246 Saving with resampleFreq = '2S'
INFO 2025-10-17 04:02:24,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1437 Wrote /mbari/LRAUV/makai/missionlogs/2025/20251006_20251014/20251010T021500/202510100215_202510101329_2S_scieng.nc