INFO 2024-04-10 05:39:53,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221017T154829/202210171548_202210171931.nc4 file... INFO 2024-04-10 05:39:53,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202210171548_202210171931.nc4 INFO 2024-04-10 05:39:53,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221017T154829/202210171548_202210171931.nc4 INFO 2024-04-10 05:39:53,615Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:53,739Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:53,855Z lrauvNc4ToNetcdf.py createSeries():299 depth : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:53,970Z lrauvNc4ToNetcdf.py createSeries():299 time : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,079Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,203Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,307Z lrauvNc4ToNetcdf.py createSeries():299 depth : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,408Z lrauvNc4ToNetcdf.py createSeries():299 time : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,508Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,617Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,739Z lrauvNc4ToNetcdf.py createSeries():299 depth : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,847Z lrauvNc4ToNetcdf.py createSeries():299 time : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:54,947Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,071Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,194Z lrauvNc4ToNetcdf.py createSeries():299 depth : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,308Z lrauvNc4ToNetcdf.py createSeries():299 time : 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-10 05:39:55,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-10 05:39:55,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-10 05:39:55,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-10 05:39:55,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:39:55,408Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:39:55,452Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:39:55,497Z lrauvNc4ToNetcdf.py createSeries():299 depth : 93 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:39:55,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-10 05:39:55,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-10 05:39:55,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-10 05:39:55,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-10 05:39:55,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-10 05:39:55,561Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-10 05:39:55,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-10 05:39:55,564Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-10 05:39:55,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-10 05:39:55,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-10 05:39:55,582Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 94 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-10 05:39:55,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-10 05:39:55,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:39:55,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-10 05:39:55,625Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-10 05:39:55,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-10 05:39:55,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-10 05:39:55,630Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-10 05:39:55,631Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:39:55,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:39:55,676Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 89 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,771Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:39:55,813Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 89 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:55,903Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:39:55,946Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 89 v_t values found before 2022-10-17 15:48:00 and after 2022-10-17 19:31:00 INFO 2024-04-10 05:39:56,038Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:39:56,039Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221017T154829/202210171548_202210171931.nc4 INFO 2024-04-10 05:39:56,251Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 32096 vehicle dead reckoned longitude and latitude values INFO 2024-04-10 05:39:56,366Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 17 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221017T154829/202210171548_202210171931.nc4 INFO 2024-04-10 05:39:56,367Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-10 05:39:56,368Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 0 0.00 - - - INFO 2024-04-10 05:39:56,369Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.401 -0.0001062 0.0004488 564 3.80 13.71 21.90 2022-10-17 15:58:13.136236906 INFO 2024-04-10 05:39:56,372Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.379 -0.0000512 0.0006562 752 5.06 15.05 24.03 2022-10-17 16:03:17.087259054 INFO 2024-04-10 05:39:56,374Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.364 -0.0002627 0.0006096 5507 37.08 1.91 3.05 2022-10-17 16:40:21.994697094 INFO 2024-04-10 05:39:56,378Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.345 0.0000280 0.0000194 314 2.11 1.07 1.70 2022-10-17 16:42:28.931148052 INFO 2024-04-10 05:39:56,381Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.398 0.0000924 0.0000072 2487 16.75 0.05 0.08 2022-10-17 16:59:14.247124910 INFO 2024-04-10 05:39:56,385Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.385 0.0000060 0.0000079 127 0.85 1.08 1.71 2022-10-17 17:00:05.636720896 INFO 2024-04-10 05:39:56,388Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.394 0.0000820 -0.0000513 6826 45.96 -0.13 -0.21 2022-10-17 17:46:03.363056898 INFO 2024-04-10 05:39:56,392Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.381 -0.0000005 0.0000104 138 0.92 1.31 2.09 2022-10-17 17:46:59.129477978 INFO 2024-04-10 05:39:56,395Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.373 0.0001184 0.0000396 3831 25.79 0.18 0.28 2022-10-17 18:12:46.999355078 INFO 2024-04-10 05:39:56,398Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.380 0.0000088 0.0000063 188 1.26 0.58 0.93 2022-10-17 18:14:02.995302916 INFO 2024-04-10 05:39:56,401Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.398 0.0006293 -0.0006642 3820 25.72 -2.99 -4.79 2022-10-17 18:39:46.356178999 INFO 2024-04-10 05:39:56,405Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.398 0.0000386 -0.0000022 123 0.82 -0.31 -0.49 2022-10-17 18:40:36.038975 INFO 2024-04-10 05:39:56,408Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.385 0.0000646 -0.0000156 4244 28.57 -0.06 -0.10 2022-10-17 19:09:10.907963991 INFO 2024-04-10 05:39:56,411Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.411 0.0000367 -0.0000206 208 1.39 -1.70 -2.73 2022-10-17 19:10:34.932806015 INFO 2024-04-10 05:39:56,414Z lrauvNc4ToNetcdf.py nudge_coords():840 14: 0.394 0.0012119 0.0008974 2232 15.04 6.93 11.06 2022-10-17 19:25:37.491234064 INFO 2024-04-10 05:39:56,417Z lrauvNc4ToNetcdf.py nudge_coords():840 15: 0.406 0.0001589 0.0001891 626 5.26 4.18 6.67 2022-10-17 19:30:53.276164055 INFO 2024-04-10 05:39:56,420Z lrauvNc4ToNetcdf.py nudge_coords():871 17: - - - 108 0.72 - - INFO 2024-04-10 05:39:56,421Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 32095 INFO 2024-04-10 05:39:56,454Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/makai_ac/between/20221017T144841/20221017T203137/data.csv INFO 2024-04-10 05:39:56,550Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-10 05:39:56,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-10 05:39:56,795Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-10 05:39:56,931Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221017T154829/202210171548_202210171931_2S_scieng.nc