INFO 2024-04-10 05:38:08,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221009T042009/202210090420_202210091624.nc4 file... INFO 2024-04-10 05:38:08,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202210090420_202210091624.nc4 INFO 2024-04-10 05:38:09,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221009T042009/202210090420_202210091624.nc4 INFO 2024-04-10 05:38:09,089Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,217Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,345Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,478Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,602Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,721Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,836Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:09,949Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,057Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,168Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,278Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,389Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,498Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,605Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,716Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,828Z lrauvNc4ToNetcdf.py createSeries():299 time : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:10,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes INFO 2024-04-10 05:38:10,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2024-04-10 05:38:10,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2024-04-10 05:38:10,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2024-04-10 05:38:10,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:38:10,955Z lrauvNc4ToNetcdf.py createSeries():299 longitude: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:38:11,044Z lrauvNc4ToNetcdf.py createSeries():299 latitude : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:38:11,136Z lrauvNc4ToNetcdf.py createSeries():299 depth : 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2024-04-10 05:38:11,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2024-04-10 05:38:11,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2024-04-10 05:38:11,261Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping INFO 2024-04-10 05:38:11,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping INFO 2024-04-10 05:38:11,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping INFO 2024-04-10 05:38:11,265Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping INFO 2024-04-10 05:38:11,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping INFO 2024-04-10 05:38:11,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping INFO 2024-04-10 05:38:11,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2024-04-10 05:38:11,282Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2024-04-10 05:38:11,295Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2024-04-10 05:38:11,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2024-04-10 05:38:11,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:38:11,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable OutputChl empty so skipping INFO 2024-04-10 05:38:11,369Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output470 empty so skipping INFO 2024-04-10 05:38:11,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable Output650 empty so skipping INFO 2024-04-10 05:38:11,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg470nm empty so skipping INFO 2024-04-10 05:38:11,373Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable VolumeScatCoeff117deg650nm empty so skipping INFO 2024-04-10 05:38:11,375Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:38:11,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2024-04-10 05:38:11,420Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,528Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:38:11,571Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,680Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:38:11,724Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation: 17 v_t values found before 2022-10-09 04:20:00 and after 2022-10-09 16:24:00 INFO 2024-04-10 05:38:11,833Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2024-04-10 05:38:11,834Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221009T042009/202210090420_202210091624.nc4 INFO 2024-04-10 05:38:12,052Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 105598 vehicle dead reckoned longitude and latitude values INFO 2024-04-10 05:38:12,155Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 15 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221009T042009/202210090420_202210091624.nc4 INFO 2024-04-10 05:38:12,156Z lrauvNc4ToNetcdf.py nudge_coords():786 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2024-04-10 05:38:12,157Z lrauvNc4ToNetcdf.py nudge_coords():807 - - - 514 3.46 - - - INFO 2024-04-10 05:38:12,159Z lrauvNc4ToNetcdf.py nudge_coords():840 0: 0.242 0.0054204 -0.0033828 1596 17.51 -21.55 -35.79 2022-10-09 04:44:12.453927040 INFO 2024-04-10 05:38:12,162Z lrauvNc4ToNetcdf.py nudge_coords():840 1: 0.395 0.0067619 -0.0062178 11296 76.07 -9.38 -15.15 2022-10-09 06:00:16.998095036 INFO 2024-04-10 05:38:12,165Z lrauvNc4ToNetcdf.py nudge_coords():840 2: 0.336 0.0006659 -0.0003248 167 1.12 -33.25 -53.71 2022-10-09 06:01:24.624975920 INFO 2024-04-10 05:38:12,168Z lrauvNc4ToNetcdf.py nudge_coords():840 3: 0.361 -0.0037771 -0.0027020 14702 99.02 -3.14 -5.06 2022-10-09 07:40:26.341139078 INFO 2024-04-10 05:38:12,173Z lrauvNc4ToNetcdf.py nudge_coords():840 4: 0.371 -0.0002947 -0.0002482 302 2.49 -11.46 -18.48 2022-10-09 07:42:56.052052021 INFO 2024-04-10 05:38:12,176Z lrauvNc4ToNetcdf.py nudge_coords():840 5: 0.381 -0.0039361 -0.0020168 15886 106.96 -2.17 -3.49 2022-10-09 09:29:54.010135889 INFO 2024-04-10 05:38:12,181Z lrauvNc4ToNetcdf.py nudge_coords():840 6: 0.396 0.0014345 -0.0009479 733 6.51 -16.75 -26.99 2022-10-09 09:36:24.810720921 INFO 2024-04-10 05:38:12,184Z lrauvNc4ToNetcdf.py nudge_coords():840 7: 0.369 -0.0003262 -0.0012543 14446 97.28 -1.48 -2.39 2022-10-09 11:13:42.077650070 INFO 2024-04-10 05:38:12,188Z lrauvNc4ToNetcdf.py nudge_coords():840 8: 0.368 0.0000827 -0.0000635 162 1.09 -6.70 -10.80 2022-10-09 11:14:47.829447031 INFO 2024-04-10 05:38:12,192Z lrauvNc4ToNetcdf.py nudge_coords():840 9: 0.394 0.0015667 0.0000919 15879 106.92 0.10 0.16 2022-10-09 13:01:43.212110996 INFO 2024-04-10 05:38:12,196Z lrauvNc4ToNetcdf.py nudge_coords():840 10: 0.347 0.0006466 0.0000768 144 0.96 9.19 14.77 2022-10-09 13:02:41.431123972 INFO 2024-04-10 05:38:12,199Z lrauvNc4ToNetcdf.py nudge_coords():840 11: 0.387 -0.0009350 -0.0029813 14566 98.07 -3.50 -5.63 2022-10-09 14:40:46.188956022 INFO 2024-04-10 05:38:12,204Z lrauvNc4ToNetcdf.py nudge_coords():840 12: 0.415 -0.0001021 -0.0001591 177 1.19 -15.35 -24.73 2022-10-09 14:41:58.148750067 INFO 2024-04-10 05:38:12,207Z lrauvNc4ToNetcdf.py nudge_coords():840 13: 0.393 0.0029778 0.0004989 14690 98.91 0.58 0.93 2022-10-09 16:20:53.292164087 INFO 2024-04-10 05:38:12,212Z lrauvNc4ToNetcdf.py nudge_coords():871 15: - - - 337 3.21 - - INFO 2024-04-10 05:38:12,212Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 105597 INFO 2024-04-10 05:38:12,242Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/makai_ac/between/20221009T032009/20221009T172406/data.csv INFO 2024-04-10 05:38:12,351Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database INFO 2024-04-10 05:38:12,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2024-04-10 05:38:12,798Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S' INFO 2024-04-10 05:38:13,150Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/makai/missionlogs/2022/20221007_20221017/20221009T042009/202210090420_202210091624_2S_scieng.nc