INFO 2024-04-09 22:57:00,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1207 Reading /mbari/LRAUV/makai/missionlogs/2020/20201007_20201017/20201015T030024/202010150300_202010150322.nc4 file...
INFO 2024-04-09 22:57:00,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1208 After copying to /tmp/202010150300_202010150322.nc4
INFO 2024-04-09 22:57:01,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1210 Read file /mbari/LRAUV/makai/missionlogs/2020/20201007_20201017/20201015T030024/202010150300_202010150322.nc4
INFO 2024-04-09 22:57:01,467Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,529Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,593Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,658Z lrauvNc4ToNetcdf.py createSeries():299 time     :   69 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,720Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,782Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,847Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,910Z lrauvNc4ToNetcdf.py createSeries():299 time     :   69 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:01,973Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,033Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,094Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,155Z lrauvNc4ToNetcdf.py createSeries():299 time     :   69 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,215Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,278Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,339Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,400Z lrauvNc4ToNetcdf.py createSeries():299 time     :   69 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1223 Creating t variable of the time indexes
INFO 2024-04-09 22:57:02,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2024-04-09 22:57:02,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2024-04-09 22:57:02,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2024-04-09 22:57:02,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2024-04-09 22:57:02,456Z lrauvNc4ToNetcdf.py createSeries():299 longitude:   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 22:57:02,463Z lrauvNc4ToNetcdf.py createSeries():299 latitude :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 22:57:02,470Z lrauvNc4ToNetcdf.py createSeries():299 depth    :   68 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2024-04-09 22:57:02,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_charge empty so skipping
INFO 2024-04-09 22:57:02,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable platform_battery_voltage empty so skipping
INFO 2024-04-09 22:57:02,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2024-04-09 22:57:02,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2024-04-09 22:57:02,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_salinity empty so skipping
INFO 2024-04-09 22:57:02,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable sea_water_temperature empty so skipping
INFO 2024-04-09 22:57:02,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_salinity empty so skipping
INFO 2024-04-09 22:57:02,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_salinity empty so skipping
INFO 2024-04-09 22:57:02,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_sea_water_temperature empty so skipping
INFO 2024-04-09 22:57:02,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_sea_water_temperature empty so skipping
INFO 2024-04-09 22:57:02,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2024-04-09 22:57:02,507Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2024-04-09 22:57:02,508Z lrauvNc4ToNetcdf.py createSeries():299 downwelling_photosynthetic_photon_flux_in_sea_water:   69 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:02,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2024-04-09 22:57:02,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2024-04-09 22:57:02,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2024-04-09 22:57:02,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2024-04-09 22:57:02,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter OutputChl renaming to chl
INFO 2024-04-09 22:57:02,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2024-04-09 22:57:02,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2024-04-09 22:57:02,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg470nm renaming to volumescatcoeff117deg470nm
INFO 2024-04-09 22:57:02,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1307 Found in group WetLabsBB2FL parameter VolumeScatCoeff117deg650nm renaming to volumescatcoeff117deg650nm
INFO 2024-04-09 22:57:02,539Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2024-04-09 22:57:02,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1264 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2024-04-09 22:57:02,567Z lrauvNc4ToNetcdf.py createSeries():299 platform_pitch_angle:   66 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:03,205Z lrauvNc4ToNetcdf.py createNav():564 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 22:57:03,225Z lrauvNc4ToNetcdf.py createSeries():299 platform_roll_angle:   66 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:03,864Z lrauvNc4ToNetcdf.py createNav():564 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 22:57:03,885Z lrauvNc4ToNetcdf.py createSeries():299 platform_orientation:   66 v_t values found before 2020-10-15 03:00:00 and after 2020-10-15 03:22:00
INFO 2024-04-09 22:57:04,598Z lrauvNc4ToNetcdf.py createNav():564 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2024-04-09 22:57:04,598Z lrauvNc4ToNetcdf.py nudge_coords():738 /mbari/LRAUV/makai/missionlogs/2020/20201007_20201017/20201015T030024/202010150300_202010150322.nc4
INFO 2024-04-09 22:57:04,703Z lrauvNc4ToNetcdf.py nudge_coords():746 Using 2696 vehicle dead reckoned longitude and latitude values
INFO 2024-04-09 22:57:04,809Z lrauvNc4ToNetcdf.py nudge_coords():772 Using 4 longitude_fix and latititude_fix values from /mbari/LRAUV/makai/missionlogs/2020/20201007_20201017/20201015T030024/202010150300_202010150322.nc4
INFO 2024-04-09 22:57:04,809Z lrauvNc4ToNetcdf.py nudge_coords():786 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi)   seg_min u_drift (cm/s) v_drift (cm/s)     start datetime of segment
INFO 2024-04-09 22:57:04,810Z lrauvNc4ToNetcdf.py nudge_coords():807                  -            -            -         0      0.00              -              -                             -
INFO 2024-04-09 22:57:04,810Z lrauvNc4ToNetcdf.py nudge_coords():840    0:        0.404   -0.0000927    0.0000343       169      1.27           2.78           5.02 2020-10-15 03:04:44.600071907
INFO 2024-04-09 22:57:04,813Z lrauvNc4ToNetcdf.py nudge_coords():840    1:        0.373   -0.0010857    0.0000458      1268      9.01           0.52           0.94 2020-10-15 03:13:45.835257053
INFO 2024-04-09 22:57:04,815Z lrauvNc4ToNetcdf.py nudge_coords():840    2:        0.388   -0.0006180    0.0000435       839      5.71           0.78           1.41 2020-10-15 03:19:28.878906012
INFO 2024-04-09 22:57:04,817Z lrauvNc4ToNetcdf.py nudge_coords():871    4:            -            -            -       419      2.99              -              -
INFO 2024-04-09 22:57:04,817Z lrauvNc4ToNetcdf.py nudge_coords():875 Points in final series = 2695
INFO 2024-04-09 22:57:04,842Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():622 http://odss.mbari.org/trackingdb/position/makai_ac/between/20201015T020035/20201015T042229/data.csv
INFO 2024-04-09 22:57:04,938Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():642 Found 0 position values from the Tracking database
INFO 2024-04-09 22:57:04,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1395 ['fix_time', 'fix_latitude', 'fix_longitude', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'volumescatcoeff117deg470nm', 'volumescatcoeff117deg650nm', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2024-04-09 22:57:05,143Z lrauvNc4ToNetcdf.py write_netcdf():241 Saving with resampleFreq = '2S'
INFO 2024-04-09 22:57:05,282Z lrauvNc4ToNetcdf.py processResampleNc4File():1398 Wrote /mbari/LRAUV/makai/missionlogs/2020/20201007_20201017/20201015T030024/202010150300_202010150322_2S_scieng.nc