INFO 2019-08-22 18:13:55,623Z lrauvNc4ToNetcdf.py processResampleNc4File():949 Reading /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4 file...
INFO 2019-08-22 18:13:55,624Z lrauvNc4ToNetcdf.py processResampleNc4File():950 After copying to /tmp/201908200411_201908200422.nc4
INFO 2019-08-22 18:13:59,175Z lrauvNc4ToNetcdf.py processResampleNc4File():952 Read file /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
INFO 2019-08-22 18:13:59,898Z lrauvNc4ToNetcdf.py processResampleNc4File():957 Creating t variable of the time indexes
INFO 2019-08-22 18:13:59,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-08-22 18:13:59,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-08-22 18:13:59,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-08-22 18:13:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-08-22 18:13:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1034 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
WARNING 2019-08-22 18:13:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1034 'longitude' not in /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
WARNING 2019-08-22 18:13:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1034 'latitude' not in /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
WARNING 2019-08-22 18:13:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1034 'depth' not in /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
INFO 2019-08-22 18:14:00,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-08-22 18:14:00,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-08-22 18:14:00,020Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-08-22 18:14:00,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-08-22 18:14:00,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-08-22 18:14:00,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1034 'platform_average_current' not in /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
INFO 2019-08-22 18:14:00,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-08-22 18:14:00,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-08-22 18:14:00,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-08-22 18:14:00,049Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-08-22 18:14:00,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1032 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
DEBUG 2019-08-22 18:14:00,103Z lrauvNc4ToNetcdf.py createNav():455 calling ts.resample() for pitch
DEBUG 2019-08-22 18:14:00,106Z lrauvNc4ToNetcdf.py createNav():457 calling self.interpolate() for pitch
INFO 2019-08-22 18:14:00,107Z lrauvNc4ToNetcdf.py createNav():467 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-08-22 18:14:00,155Z lrauvNc4ToNetcdf.py createNav():455 calling ts.resample() for roll
DEBUG 2019-08-22 18:14:00,158Z lrauvNc4ToNetcdf.py createNav():457 calling self.interpolate() for roll
INFO 2019-08-22 18:14:00,159Z lrauvNc4ToNetcdf.py createNav():467 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-08-22 18:14:00,207Z lrauvNc4ToNetcdf.py createNav():455 calling ts.resample() for yaw
DEBUG 2019-08-22 18:14:00,210Z lrauvNc4ToNetcdf.py createNav():457 calling self.interpolate() for yaw
INFO 2019-08-22 18:14:00,211Z lrauvNc4ToNetcdf.py createNav():467 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-08-22 18:14:00,212Z lrauvNc4ToNetcdf.py nudge_coords():587 /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422.nc4
DEBUG 2019-08-22 18:14:00,257Z lrauvNc4ToNetcdf.py var_series():575 longitude: rad_to_deg = True
DEBUG 2019-08-22 18:14:00,303Z lrauvNc4ToNetcdf.py var_series():575 latitude: rad_to_deg = True
DEBUG 2019-08-22 18:14:00,332Z lrauvNc4ToNetcdf.py var_series():575 longitude_fix: rad_to_deg = True
DEBUG 2019-08-22 18:14:00,363Z lrauvNc4ToNetcdf.py var_series():575 latitude_fix: rad_to_deg = True
INFO 2019-08-22 18:14:00,364Z lrauvNc4ToNetcdf.py nudge_coords():605 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-08-22 18:14:00,366Z lrauvNc4ToNetcdf.py nudge_coords():621                  -            -            -         0    0.00              -              -
INFO 2019-08-22 18:14:00,367Z lrauvNc4ToNetcdf.py nudge_coords():643    0:        0.527   -0.0000421   -0.0002809       154    1.30          21.72         -40.18
INFO 2019-08-22 18:14:00,373Z lrauvNc4ToNetcdf.py nudge_coords():643    1:        0.349   -0.0017847   -0.0034074       907    6.29          54.25        -100.41
INFO 2019-08-22 18:14:00,379Z lrauvNc4ToNetcdf.py nudge_coords():673    3:            -            -            -       269    1.96              -              -
INFO 2019-08-22 18:14:00,380Z lrauvNc4ToNetcdf.py nudge_coords():677 Points in final series = 1330
DEBUG 2019-08-22 18:14:00,381Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():503 Constructing trackingdb url to 3600 seconds beyond time range of file
INFO 2019-08-22 18:14:00,393Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():511 http://odss.mbari.org/trackingdb/position/makai_ac/between/20190820T031116/20190820T052224/data.csv
INFO 2019-08-22 18:14:00,412Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():534 Found 0 position values from the Tracking database
INFO 2019-08-22 18:14:00,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1085 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
DEBUG 2019-08-22 18:14:00,416Z lrauvNc4ToNetcdf.py write_netcdf():117 Creating netCDF file /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422_2S_eng.nc
DEBUG 2019-08-22 18:14:00,421Z lrauvNc4ToNetcdf.py write_netcdf():139 Adding in record variable fix_time
DEBUG 2019-08-22 18:14:00,449Z lrauvNc4ToNetcdf.py write_netcdf():139 Adding in record variable time
DEBUG 2019-08-22 18:14:00,450Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-08-22 18:14:00,451Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-08-22 18:14:00,453Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-08-22 18:14:00,454Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-08-22 18:14:00,456Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable health_platform_battery_charge
DEBUG 2019-08-22 18:14:00,457Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable health_platform_average_voltage
DEBUG 2019-08-22 18:14:00,458Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable fix_latitude
DEBUG 2019-08-22 18:14:00,464Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable fix_longitude
DEBUG 2019-08-22 18:14:00,465Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable control_inputs_buoyancy_position
DEBUG 2019-08-22 18:14:00,466Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable control_inputs_elevator_angle
DEBUG 2019-08-22 18:14:00,468Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable control_inputs_mass_position
DEBUG 2019-08-22 18:14:00,469Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable control_inputs_rudder_angle
DEBUG 2019-08-22 18:14:00,470Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable control_inputs_propeller_rotation_rate
DEBUG 2019-08-22 18:14:00,472Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable pitch
DEBUG 2019-08-22 18:14:00,473Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable roll
DEBUG 2019-08-22 18:14:00,474Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable yaw
DEBUG 2019-08-22 18:14:00,475Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable latitude
DEBUG 2019-08-22 18:14:00,477Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable longitude
DEBUG 2019-08-22 18:14:00,478Z lrauvNc4ToNetcdf.py write_netcdf():151 Adding in record variable depth
DEBUG 2019-08-22 18:14:00,480Z lrauvNc4ToNetcdf.py write_netcdf():158 Adding in global metadata
INFO 2019-08-22 18:14:00,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1088 Wrote /mbari/LRAUV/makai/missionlogs/2019/20190819_20190821/20190820T041103/201908200411_201908200422_2S_eng.nc