INFO 2020-11-12 15:24:19,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 file... INFO 2020-11-12 15:24:19,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:20,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:20,932Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:21,446Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:21,931Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:22,420Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:22,910Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:23,395Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:23,878Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:24,371Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:24,864Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:25,343Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:25,847Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:26,336Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:26,841Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:27,322Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:27,809Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:28,292Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:28,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:28,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:24:29,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:29,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:29,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:29,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:29,576Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:30,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:30,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:30,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:31,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:31,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:31,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:31,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:31,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:24:31,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:24:32,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:24:32,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:24:32,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:24:32,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:32,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:32,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:32,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:32,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:32,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:32,942Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:33,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:33,390Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:33,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:33,842Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:34,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:34,326Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:34,800Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:34,830Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:35,300Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:35,330Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:35,807Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:35,808Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:36,873Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:24:36,875Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:24:36,877Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.341 -0.0001395 -0.0001147 229 1.53 9.37 -13.93 2018-08-26 04:22:12.471481085 INFO 2020-11-12 15:24:36,881Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.284 0.0001062 0.0001848 140 1.28 -17.93 26.67 2018-08-26 04:23:29.915883064 INFO 2020-11-12 15:24:36,886Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.376 -0.0000377 0.0001619 918 6.90 -2.92 4.35 2018-08-26 04:30:24.150433064 INFO 2020-11-12 15:24:36,891Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.360 -0.0000130 0.0000093 143 1.63 -0.71 1.06 2018-08-26 04:32:02.195847988 INFO 2020-11-12 15:24:36,895Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.296 -0.0000525 0.0001339 738 5.74 -2.91 4.32 2018-08-26 04:37:47.000670910 INFO 2020-11-12 15:24:36,900Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.335 -0.0000285 0.0000490 210 2.01 -3.04 4.53 2018-08-26 04:39:47.734954119 INFO 2020-11-12 15:24:36,905Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.348 -0.0010107 -0.0009893 4904 32.78 3.72 -5.59 2018-08-26 05:12:35.068607092 INFO 2020-11-12 15:24:36,910Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.263 -0.0000502 0.0001085 159 1.44 -9.31 14.01 2018-08-26 05:14:01.605612040 INFO 2020-11-12 15:24:36,915Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.338 0.0019284 -0.0008416 4634 30.97 3.31 -5.04 2018-08-26 05:44:59.850044966 INFO 2020-11-12 15:24:36,921Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.388 -0.0031363 -0.0003172 259 1.93 20.03 -30.48 2018-08-26 05:46:56.049374104 INFO 2020-11-12 15:24:36,925Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.351 -0.0000390 0.0000042 120 0.85 -0.60 0.91 2018-08-26 05:47:47.417314053 INFO 2020-11-12 15:24:36,930Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.337 -0.0000227 0.0001003 1024 8.12 -1.50 2.29 2018-08-26 05:55:55.060625076 INFO 2020-11-12 15:24:36,934Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.358 0.0001130 0.0034788 939 6.80 -62.04 94.80 2018-08-26 06:02:43.446237087 INFO 2020-11-12 15:24:36,939Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.347 -0.0000667 -0.0033100 484 3.80 106.01 -161.37 2018-08-26 06:06:31.979743958 INFO 2020-11-12 15:24:36,944Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.332 -0.0001295 -0.0000442 165 1.72 3.14 -4.77 2018-08-26 06:08:15.295010090 INFO 2020-11-12 15:24:36,948Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.257 -0.0025632 -0.0007858 4605 30.79 3.06 -4.73 2018-08-26 06:39:03.354795933 INFO 2020-11-12 15:24:36,954Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.347 0.0011420 -0.0000433 137 1.19 4.37 -6.75 2018-08-26 06:40:14.999758959 INFO 2020-11-12 15:24:36,958Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.349 -0.0011781 -0.0012978 4627 30.89 4.95 -7.78 2018-08-26 07:11:08.960860968 INFO 2020-11-12 15:24:36,963Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.363 0.0001704 0.0003394 927 6.95 -5.75 9.05 2018-08-26 07:18:06.411315918 INFO 2020-11-12 15:24:36,969Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.323 0.0012642 0.0016773 149 1.57 -125.91 198.58 2018-08-26 07:19:40.835201025 INFO 2020-11-12 15:24:36,973Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.347 0.0000872 -0.0003815 4742 31.70 1.42 -2.23 2018-08-26 07:51:23.173784018 INFO 2020-11-12 15:24:36,978Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.273 0.0000590 0.0000167 35 0.68 -2.91 4.55 2018-08-26 07:52:04.263184071 INFO 2020-11-12 15:24:36,983Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.312 0.0012038 0.0012082 4649 31.10 -4.62 7.20 2018-08-26 08:23:10.397422075 INFO 2020-11-12 15:24:36,988Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.346 -0.0000357 -0.0000350 78 0.56 7.46 -11.62 2018-08-26 08:23:44.266453027 INFO 2020-11-12 15:24:36,992Z lrauvNc4ToNetcdf.py nudge_coords():754 25: - - - 526 4.50 - - INFO 2020-11-12 15:24:36,992Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 35541 INFO 2020-11-12 15:24:37,018Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T031928/20180826T092815/data.csv INFO 2020-11-12 15:24:37,065Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:24:37,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:24:37,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828_2S_scieng.nc