INFO 2020-11-12 15:20:57,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152506/201808241525_201808241526.nc4 file... INFO 2020-11-12 15:20:57,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808241525_201808241526.nc4 INFO 2020-11-12 15:20:58,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152506/201808241525_201808241526.nc4 INFO 2020-11-12 15:20:58,558Z lrauvNc4ToNetcdf.py createSeries():241 depth : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:58,614Z lrauvNc4ToNetcdf.py createSeries():241 time : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:58,705Z lrauvNc4ToNetcdf.py createSeries():241 depth : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:58,760Z lrauvNc4ToNetcdf.py createSeries():241 time : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:58,866Z lrauvNc4ToNetcdf.py createSeries():241 depth : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:58,923Z lrauvNc4ToNetcdf.py createSeries():241 time : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,014Z lrauvNc4ToNetcdf.py createSeries():241 depth : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,070Z lrauvNc4ToNetcdf.py createSeries():241 time : 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:20:59,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:20:59,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:20:59,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:20:59,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:20:59,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:20:59,126Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:20:59,139Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:20:59,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:20:59,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:20:59,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:20:59,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:20:59,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:20:59,164Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:20:59,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:20:59,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable time_fix empty so skipping INFO 2020-11-12 15:20:59,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude_fix empty so skipping INFO 2020-11-12 15:20:59,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude_fix empty so skipping INFO 2020-11-12 15:20:59,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:20:59,183Z lrauvNc4ToNetcdf.py createSeries():241 platform_elevator_angle: 12 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:20:59,190Z lrauvNc4ToNetcdf.py createSeries():241 platform_mass_position: 39 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:20:59,197Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 10 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:20:59,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:20:59,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:20:59,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude empty so skipping INFO 2020-11-12 15:20:59,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude empty so skipping INFO 2020-11-12 15:20:59,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable depth empty so skipping INFO 2020-11-12 15:20:59,235Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,276Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:20:59,294Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,335Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:20:59,353Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 134 v_t values found before 2018-08-24 15:25:00 and after 2018-08-24 15:26:00 INFO 2020-11-12 15:20:59,394Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:20:59,394Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152506/201808241525_201808241526.nc4 INFO 2020-11-12 15:20:59,485Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-11-12 15:20:59,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1186 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-11-12 15:20:59,486Z lrauvNc4ToNetcdf.py processResampleNc4File():1187 Not creating /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152506/201808241525_201808241526_2S_scieng.nc INFO 2020-11-12 15:20:59,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152750/201808241528_201808241548.nc4 file... INFO 2020-11-12 15:20:59,651Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808241528_201808241548.nc4 INFO 2020-11-12 15:21:05,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152750/201808241528_201808241548.nc4 INFO 2020-11-12 15:21:05,488Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:05,571Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:05,653Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:05,740Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:05,827Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:05,907Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,009Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,100Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,187Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,267Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,348Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,434Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,521Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,602Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,682Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,768Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:21:06,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:21:06,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:21:06,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:21:06,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:21:06,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:21:06,858Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:06,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:21:06,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:21:06,907Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:21:06,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:21:06,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:21:06,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:21:06,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:21:06,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:21:06,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:21:06,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:21:06,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:21:06,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:21:06,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:21:06,971Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:21:06,977Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:21:06,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:21:06,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:21:06,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:21:06,992Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:07,026Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:07,062Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:07,120Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 109 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,193Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:07,215Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 109 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,287Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:07,307Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 109 v_t values found before 2018-08-24 15:28:00 and after 2018-08-24 15:48:00 INFO 2020-11-12 15:21:07,380Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:07,380Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152750/201808241528_201808241548.nc4 INFO 2020-11-12 15:21:07,615Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:21:07,616Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:21:07,618Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.334 0.0000132 -0.0000123 7 0.04 31.72 -57.25 2018-08-24 15:31:37.033947945 INFO 2020-11-12 15:21:07,622Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 2237 17.25 - - INFO 2020-11-12 15:21:07,622Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 2244 INFO 2020-11-12 15:21:07,642Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180824T142802/20180824T164852/data.csv INFO 2020-11-12 15:21:07,680Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:21:07,682Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:21:07,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T152750/201808241528_201808241548_2S_scieng.nc INFO 2020-11-12 15:21:07,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808241528_201808241548.nc4 INFO 2020-11-12 15:21:08,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933.nc4 file... INFO 2020-11-12 15:21:08,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808241549_201808241933.nc4 INFO 2020-11-12 15:21:10,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933.nc4 INFO 2020-11-12 15:21:10,194Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:12,356Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:14,517Z lrauvNc4ToNetcdf.py createSeries():241 depth : 141 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:16,770Z lrauvNc4ToNetcdf.py createSeries():241 time : 135 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:17,228Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:19,393Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:21,591Z lrauvNc4ToNetcdf.py createSeries():241 depth : 141 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:23,829Z lrauvNc4ToNetcdf.py createSeries():241 time : 135 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:24,287Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:26,474Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:28,632Z lrauvNc4ToNetcdf.py createSeries():241 depth : 141 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:30,841Z lrauvNc4ToNetcdf.py createSeries():241 time : 135 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:31,303Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:33,473Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:35,627Z lrauvNc4ToNetcdf.py createSeries():241 depth : 141 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:37,874Z lrauvNc4ToNetcdf.py createSeries():241 time : 135 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:38,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:21:38,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:21:38,605Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:21:38,755Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:21:38,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:21:38,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:21:38,764Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 136 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:39,187Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:21:39,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:21:39,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:21:40,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:21:40,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:21:40,341Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:21:40,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:21:40,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:21:40,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:21:40,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:21:40,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:21:40,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:21:40,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:21:40,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:21:40,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:21:40,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:21:40,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:21:40,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:40,849Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:41,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:41,272Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:41,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:41,693Z lrauvNc4ToNetcdf.py createSeries():241 depth : 137 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:42,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:21:42,145Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 136 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:44,230Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:44,268Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 136 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:46,353Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:46,390Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 136 v_t values found before 2018-08-24 15:49:00 and after 2018-08-24 19:33:00 INFO 2020-11-12 15:21:48,493Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:21:48,494Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933.nc4 INFO 2020-11-12 15:21:48,530Z lrauvNc4ToNetcdf.py var_series():601 Removing bad longitude times from /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933.nc4 ([index], [values]): [ 600 12559 23371], ['2915-04-15 06:11:34.921120', '3611-10-10 22:29:16.715660', '2515-04-01 00:02:16.197411'] INFO 2020-11-12 15:21:48,971Z lrauvNc4ToNetcdf.py var_series():601 Removing bad latitude times from /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933.nc4 ([index], [values]): [ 600 12559 23371], ['2915-04-15 06:11:34.921120', '3611-10-10 22:29:16.715660', '2515-04-01 00:02:16.197411'] INFO 2020-11-12 15:21:49,512Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:21:49,514Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:21:49,515Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.332 -0.0000403 0.0000572 158 1.26 -4.65 8.40 2018-08-24 15:52:49.047828913 INFO 2020-11-12 15:21:49,520Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.329 -0.0001132 0.0001770 1065 8.37 -2.17 3.92 2018-08-24 16:01:11.774893999 INFO 2020-11-12 15:21:49,524Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.342 -0.0000890 0.0000857 259 2.32 -3.79 6.85 2018-08-24 16:03:31.181653976 INFO 2020-11-12 15:21:49,529Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.358 -0.0055234 0.0045035 9676 64.60 -7.43 12.92 2018-08-24 17:08:07.348345995 INFO 2020-11-12 15:21:49,534Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.410 0.0011488 0.0009257 1943 15.10 -6.52 11.36 2018-08-24 17:23:13.658432007 INFO 2020-11-12 15:21:49,539Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.347 -0.0003808 -0.0004152 717 5.58 7.92 -13.78 2018-08-24 17:28:49.183712959 INFO 2020-11-12 15:21:49,544Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.351 -0.0056220 0.0000978 2571 17.15 -0.61 1.06 2018-08-24 17:45:58.597332001 INFO 2020-11-12 15:21:49,549Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.355 0.0040548 0.0012988 1330 9.70 -14.38 24.80 2018-08-24 17:55:41.269316912 INFO 2020-11-12 15:21:49,554Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.347 -0.0000800 0.0016870 1139 8.16 -22.17 38.31 2018-08-24 18:03:51.217318058 INFO 2020-11-12 15:21:49,558Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.348 0.0017565 0.0003032 908 6.55 -4.96 8.57 2018-08-24 18:10:24.832325935 INFO 2020-11-12 15:21:49,563Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.338 -0.0015567 -0.0015330 902 6.52 25.25 -43.56 2018-08-24 18:16:56.518539906 INFO 2020-11-12 15:21:49,567Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.345 -0.0000043 0.0001113 968 7.34 -1.63 2.81 2018-08-24 18:24:17.203449011 INFO 2020-11-12 15:21:49,572Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.369 0.0003240 0.0003100 298 2.63 -12.68 21.88 2018-08-24 18:26:55.192387104 INFO 2020-11-12 15:21:49,576Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.756 0.0000158 0.0007040 1351 10.01 -7.54 13.03 2018-08-24 18:36:56.475080967 INFO 2020-11-12 15:21:49,581Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.351 -0.0000053 0.0000075 40 0.27 -2.97 5.14 2018-08-24 18:37:13.621299982 INFO 2020-11-12 15:21:49,585Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.108 0.0003195 0.0003220 227 3.18 -10.84 18.75 2018-08-24 18:40:24.979192019 INFO 2020-11-12 15:21:49,590Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.347 -0.0005645 -0.0004477 337 3.35 14.35 -24.79 2018-08-24 18:43:46.039627075 INFO 2020-11-12 15:21:49,594Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.326 -0.0000593 -0.0000241 13 0.08 32.88 -56.81 2018-08-24 18:43:51.286142111 INFO 2020-11-12 15:21:49,599Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.341 -0.0000302 -0.0000070 30 0.52 1.45 -2.50 2018-08-24 18:44:22.839888096 INFO 2020-11-12 15:21:49,603Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.339 0.0008566 0.0005241 3146 21.01 -2.68 4.62 2018-08-24 19:05:23.790658951 INFO 2020-11-12 15:21:49,608Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.292 0.0002077 0.0004098 1007 7.39 -5.95 10.28 2018-08-24 19:12:47.476125956 INFO 2020-11-12 15:21:49,613Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.324 0.0001553 0.0005427 1041 7.69 -7.56 13.07 2018-08-24 19:20:29.351924896 INFO 2020-11-12 15:21:49,617Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.346 -0.0000913 -0.0000227 1163 8.49 0.29 -0.49 2018-08-24 19:28:59.398350954 INFO 2020-11-12 15:21:49,622Z lrauvNc4ToNetcdf.py nudge_coords():754 24: - - - 641 4.99 - - INFO 2020-11-12 15:21:49,622Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 30930 INFO 2020-11-12 15:21:49,654Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180824T144903/20180824T203359/data.csv INFO 2020-11-12 15:21:49,702Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:21:49,706Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:21:50,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T154853/201808241549_201808241933_2S_scieng.nc INFO 2020-11-12 15:21:50,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808241549_201808241933.nc4 INFO 2020-11-12 15:21:50,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028.nc4 file... INFO 2020-11-12 15:21:50,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808241933_201808250028.nc4 INFO 2020-11-12 15:21:52,611Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028.nc4 INFO 2020-11-12 15:21:52,655Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:21:54,112Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:21:55,573Z lrauvNc4ToNetcdf.py createSeries():241 depth : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:21:57,056Z lrauvNc4ToNetcdf.py createSeries():241 time : 63 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:21:57,666Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:21:59,116Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:00,567Z lrauvNc4ToNetcdf.py createSeries():241 depth : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:02,019Z lrauvNc4ToNetcdf.py createSeries():241 time : 63 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:02,652Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:04,077Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:05,529Z lrauvNc4ToNetcdf.py createSeries():241 depth : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:06,980Z lrauvNc4ToNetcdf.py createSeries():241 time : 63 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:07,584Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:09,053Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:10,494Z lrauvNc4ToNetcdf.py createSeries():241 depth : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:11,940Z lrauvNc4ToNetcdf.py createSeries():241 time : 63 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:12,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:22:12,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:22:13,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:22:13,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:22:13,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:22:13,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:22:13,441Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 63 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:13,981Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:22:14,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:15,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:22:15,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:22:16,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:22:16,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:16,455Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:16,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:22:16,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:22:16,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:22:16,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:22:16,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:22:16,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:22:16,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:22:16,600Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:22:16,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:22:17,343Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:22:17,349Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:22:17,356Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:17,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:22:17,916Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:18,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:22:18,476Z lrauvNc4ToNetcdf.py createSeries():241 depth : 64 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:19,031Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:22:19,088Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 61 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:19,661Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:22:19,707Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 61 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:20,295Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:22:20,340Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 61 v_t values found before 2018-08-24 19:33:00 and after 2018-08-25 00:28:00 INFO 2020-11-12 15:22:20,922Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:22:20,922Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028.nc4 INFO 2020-11-12 15:22:20,993Z lrauvNc4ToNetcdf.py var_series():601 Removing bad longitude times from /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028.nc4 ([index], [values]): [902], ['3681-10-05 04:21:02.914757'] INFO 2020-11-12 15:22:21,580Z lrauvNc4ToNetcdf.py var_series():601 Removing bad latitude times from /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028.nc4 ([index], [values]): [902], ['3681-10-05 04:21:02.914757'] INFO 2020-11-12 15:22:22,280Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:22:22,281Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:22:22,282Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.340 -0.0002895 0.0003177 907 7.57 -4.49 7.78 2018-08-24 19:43:51.531810044 INFO 2020-11-12 15:22:22,287Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.347 -0.0001078 0.0000407 293 2.53 -1.72 2.98 2018-08-24 19:46:23.795722008 INFO 2020-11-12 15:22:22,292Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.346 0.0000241 0.0000002 13 0.08 -0.32 0.56 2018-08-24 19:46:29.070477009 INFO 2020-11-12 15:22:22,296Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.339 0.0001133 -0.0001075 319 2.54 4.53 -7.84 2018-08-24 19:49:01.880773067 INFO 2020-11-12 15:22:22,301Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.303 -0.0164437 0.0012001 36261 242.26 -0.53 0.92 2018-08-24 23:51:18.058284044 INFO 2020-11-12 15:22:22,308Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.348 0.0002510 0.0009427 956 6.99 -14.32 24.98 2018-08-24 23:58:18.046602964 INFO 2020-11-12 15:22:22,313Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.346 -0.0000943 -0.0008420 945 7.14 12.55 -21.86 2018-08-25 00:05:26.647707939 INFO 2020-11-12 15:22:22,318Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.377 -0.0000077 0.0000539 196 1.91 -3.00 5.23 2018-08-25 00:07:21.881094933 INFO 2020-11-12 15:22:22,322Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.310 0.0000115 0.0000438 167 1.59 -2.92 5.09 2018-08-25 00:08:58.029441118 INFO 2020-11-12 15:22:22,327Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.352 -0.0020836 0.0009835 2516 16.92 -6.24 10.77 2018-08-25 00:25:53.481312990 INFO 2020-11-12 15:22:22,331Z lrauvNc4ToNetcdf.py nudge_coords():754 11: - - - 338 2.65 - - INFO 2020-11-12 15:22:22,331Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 42911 INFO 2020-11-12 15:22:22,367Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180824T183359/20180825T012832/data.csv INFO 2020-11-12 15:22:22,394Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:22:22,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:22:22,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180824T193359/201808241933_201808250028_2S_scieng.nc INFO 2020-11-12 15:22:22,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808241933_201808250028.nc4 INFO 2020-11-12 15:22:25,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T002849/201808250029_201808251434.nc4 file... INFO 2020-11-12 15:22:25,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808250029_201808251434.nc4 INFO 2020-11-12 15:22:26,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T002849/201808250029_201808251434.nc4 INFO 2020-11-12 15:22:26,837Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:28,408Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:29,974Z lrauvNc4ToNetcdf.py createSeries():241 depth : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:31,528Z lrauvNc4ToNetcdf.py createSeries():241 time : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:33,049Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:34,568Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:36,077Z lrauvNc4ToNetcdf.py createSeries():241 depth : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:37,590Z lrauvNc4ToNetcdf.py createSeries():241 time : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:39,097Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:40,605Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:42,112Z lrauvNc4ToNetcdf.py createSeries():241 depth : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:43,624Z lrauvNc4ToNetcdf.py createSeries():241 time : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:45,129Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:46,633Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:48,138Z lrauvNc4ToNetcdf.py createSeries():241 depth : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:49,642Z lrauvNc4ToNetcdf.py createSeries():241 time : 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:51,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:22:51,148Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 4 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:51,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:22:51,645Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 4 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:52,175Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:22:52,180Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 4 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:52,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:22:52,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:22:53,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:22:53,054Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:54,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:22:54,565Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 10 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:55,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:55,586Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 10 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:56,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:22:56,617Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 10 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:57,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:22:57,642Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 10 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:58,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:22:58,664Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:58,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:58,778Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 1 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:58,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:22:58,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:22:58,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:22:58,935Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:22:58,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:22:58,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:22:58,951Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:22:59,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:22:59,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:22:59,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:22:59,943Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 3 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:00,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:23:02,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:23:02,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:02,175Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:03,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:03,697Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:05,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:05,204Z lrauvNc4ToNetcdf.py createSeries():241 depth : 2 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:06,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:06,761Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 1 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:08,243Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:08,286Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 1 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:09,781Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:09,824Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 1 v_t values found before 2018-08-25 00:29:00 and after 2018-08-25 14:34:00 INFO 2020-11-12 15:23:11,318Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:11,319Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T002849/201808250029_201808251434.nc4 INFO 2020-11-12 15:23:14,423Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:23:14,424Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:23:14,426Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.345 0.0000473 0.0000267 229 1.53 -1.88 3.24 2018-08-25 00:31:41.567495108 INFO 2020-11-12 15:23:14,431Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.293 -0.0000412 -0.0000128 159 1.27 1.09 -1.88 2018-08-25 00:32:58.009668112 INFO 2020-11-12 15:23:14,436Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.335 -0.0013002 0.0003717 919 7.03 -5.67 9.79 2018-08-25 00:40:00.512841940 INFO 2020-11-12 15:23:14,440Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.358 0.0014865 -0.0004105 197 1.96 22.44 -38.72 2018-08-25 00:41:58.820003986 INFO 2020-11-12 15:23:14,445Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.346 -0.0005872 0.0002475 4111 27.78 -0.96 1.65 2018-08-25 01:09:46.045691967 INFO 2020-11-12 15:23:14,451Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.344 0.0002203 -0.0000658 1213 8.79 0.80 -1.39 2018-08-25 01:18:33.908444881 INFO 2020-11-12 15:23:14,455Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.351 0.0000185 -0.0000720 1056 7.76 1.00 -1.72 2018-08-25 01:26:19.653403997 INFO 2020-11-12 15:23:14,461Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.346 -0.0071620 -0.0004870 20935 141.06 0.37 -0.64 2018-08-25 03:47:23.649682045 INFO 2020-11-12 15:23:14,468Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.346 0.0036083 0.0009645 1470 11.33 -9.10 15.78 2018-08-25 03:58:43.715643883 INFO 2020-11-12 15:23:14,472Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.354 -0.0081050 -0.0001710 1201 8.64 2.12 -3.67 2018-08-25 04:07:22.434478045 INFO 2020-11-12 15:23:14,477Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.342 0.0050857 -0.0009848 913 6.62 15.92 -27.56 2018-08-25 04:14:00.203593016 INFO 2020-11-12 15:23:14,482Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.344 0.0001588 0.0000135 900 6.51 -0.22 0.38 2018-08-25 04:20:31.084438086 INFO 2020-11-12 15:23:14,487Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.336 0.0002540 0.0001548 951 6.90 -2.40 4.16 2018-08-25 04:27:25.384907961 INFO 2020-11-12 15:23:14,492Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.328 0.0001285 0.0000455 1005 7.25 -0.67 1.16 2018-08-25 04:34:40.724016905 INFO 2020-11-12 15:23:14,497Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.295 0.0001253 0.0000230 828 6.26 -0.39 0.68 2018-08-25 04:40:56.951169968 INFO 2020-11-12 15:23:14,502Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.338 0.0000430 -0.0000177 393 3.28 0.58 -1.00 2018-08-25 04:44:13.937506914 INFO 2020-11-12 15:23:14,507Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.373 -0.0037995 0.0050706 9813 65.80 -8.48 14.28 2018-08-25 05:50:02.202848911 INFO 2020-11-12 15:23:14,512Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.135 -0.0001832 -0.0002655 27 0.46 63.88 -107.55 2018-08-25 05:50:30.117255926 INFO 2020-11-12 15:23:14,517Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.362 -0.0054546 0.0041278 9515 63.73 -7.32 12.00 2018-08-25 06:54:14.036813021 INFO 2020-11-12 15:23:14,523Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.346 0.0000117 0.0000072 76 0.93 -0.87 1.43 2018-08-25 06:55:10.272286892 INFO 2020-11-12 15:23:14,528Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.339 -0.0072232 0.0033803 9468 63.70 -6.15 9.83 2018-08-25 07:58:52.944839954 INFO 2020-11-12 15:23:14,534Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.121 -0.0002615 0.0003902 30 0.47 -96.15 153.70 2018-08-25 07:59:21.667131901 INFO 2020-11-12 15:23:14,539Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.345 -0.0092311 0.0032707 9515 63.90 -6.08 9.48 2018-08-25 09:03:15.913861036 INFO 2020-11-12 15:23:14,544Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.331 0.0000223 0.0000125 28 0.52 -2.87 4.47 2018-08-25 09:03:47.493552923 INFO 2020-11-12 15:23:14,549Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.358 -0.0032714 0.0000800 3230 21.65 -0.44 0.68 2018-08-25 09:25:27.214117050 INFO 2020-11-12 15:23:14,555Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.357 -0.0002678 0.0001047 982 7.08 -1.77 2.74 2018-08-25 09:32:32.451222897 INFO 2020-11-12 15:23:14,560Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.334 -0.0001007 0.0000317 200 2.48 -1.53 2.36 2018-08-25 09:35:01.786936045 INFO 2020-11-12 15:23:14,564Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.351 -0.0001620 0.0000318 290 3.07 -1.24 1.92 2018-08-25 09:38:06.729485035 INFO 2020-11-12 15:23:14,569Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.340 -0.0044775 0.0003471 6106 40.97 -0.99 1.57 2018-08-25 10:19:05.639882088 INFO 2020-11-12 15:23:14,576Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.329 -0.0005263 0.0001112 147 1.34 -9.73 15.35 2018-08-25 10:20:26.575283051 INFO 2020-11-12 15:23:14,581Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.341 -0.0021109 -0.0009787 1655 11.20 10.24 -16.19 2018-08-25 10:31:39.223536968 INFO 2020-11-12 15:23:14,586Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.345 -0.0006065 -0.0004053 1011 7.32 6.49 -10.26 2018-08-25 10:38:58.830600023 INFO 2020-11-12 15:23:14,591Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.356 -0.0001287 0.0004330 891 6.62 -7.67 12.12 2018-08-25 10:45:36.483607054 INFO 2020-11-12 15:23:14,597Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.340 -0.0000157 0.0000065 43 0.50 -1.51 2.39 2018-08-25 10:46:07.116573095 INFO 2020-11-12 15:23:14,602Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.349 0.0002151 0.0003259 617 5.21 -7.33 11.59 2018-08-25 10:51:20.067720890 INFO 2020-11-12 15:23:14,607Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.329 -0.0007225 -0.0003092 325 2.81 12.91 -20.40 2018-08-25 10:54:08.934221983 INFO 2020-11-12 15:23:14,612Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.342 -0.0069918 0.0022525 6769 45.53 -5.90 9.17 2018-08-25 11:39:41.316920042 INFO 2020-11-12 15:23:14,617Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.343 -0.0000230 0.0000092 26 0.44 -2.48 3.85 2018-08-25 11:40:08.251072884 INFO 2020-11-12 15:23:14,622Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.358 -0.0060840 0.0000123 6228 41.89 -0.04 0.05 2018-08-25 12:22:02.332710981 INFO 2020-11-12 15:23:14,628Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.273 -0.0001045 0.0001218 340 2.77 -5.24 8.15 2018-08-25 12:24:48.999610901 INFO 2020-11-12 15:23:14,633Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.315 -0.0039182 -0.0008243 6452 43.33 2.24 -3.53 2018-08-25 13:08:08.875107050 INFO 2020-11-12 15:23:14,638Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.384 0.0000155 0.0000387 27 0.49 -9.33 14.67 2018-08-25 13:08:38.587754965 INFO 2020-11-12 15:23:14,643Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.376 -0.0043365 0.0000684 6166 41.36 -0.19 0.31 2018-08-25 13:50:00.395768881 INFO 2020-11-12 15:23:14,649Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.340 -0.0000565 0.0000848 360 2.98 -3.36 5.28 2018-08-25 13:52:59.520668029 INFO 2020-11-12 15:23:14,655Z lrauvNc4ToNetcdf.py nudge_coords():754 45: - - - 6107 41.07 - - INFO 2020-11-12 15:23:14,656Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 122924 INFO 2020-11-12 15:23:14,683Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180824T232901/20180825T153404/data.csv INFO 2020-11-12 15:23:14,762Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:23:14,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:23:15,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T002849/201808250029_201808251434_2S_scieng.nc INFO 2020-11-12 15:23:15,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808250029_201808251434.nc4 INFO 2020-11-12 15:23:16,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T143404/201808251434_201808252018.nc4 file... INFO 2020-11-12 15:23:16,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808251434_201808252018.nc4 INFO 2020-11-12 15:23:18,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T143404/201808251434_201808252018.nc4 INFO 2020-11-12 15:23:18,533Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:19,208Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:19,881Z lrauvNc4ToNetcdf.py createSeries():241 depth : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:20,580Z lrauvNc4ToNetcdf.py createSeries():241 time : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:21,249Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:21,925Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:22,595Z lrauvNc4ToNetcdf.py createSeries():241 depth : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:23,253Z lrauvNc4ToNetcdf.py createSeries():241 time : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:23,940Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:24,617Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:25,285Z lrauvNc4ToNetcdf.py createSeries():241 depth : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:25,955Z lrauvNc4ToNetcdf.py createSeries():241 time : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:26,635Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:27,320Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:27,991Z lrauvNc4ToNetcdf.py createSeries():241 depth : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:28,668Z lrauvNc4ToNetcdf.py createSeries():241 time : 91 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:29,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:23:29,326Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 2 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:29,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:23:29,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:23:30,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:23:30,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:23:30,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:23:30,472Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:31,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:23:31,112Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 3 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:31,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:23:31,581Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 3 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:32,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:23:32,048Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 3 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:32,509Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:23:32,515Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 3 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:32,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:23:33,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:23:33,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:23:33,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:23:33,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:23:33,173Z lrauvNc4ToNetcdf.py createSeries():241 time_fix : 2 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:33,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:23:33,180Z lrauvNc4ToNetcdf.py createSeries():241 latitude_fix: 2 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:33,186Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:23:33,187Z lrauvNc4ToNetcdf.py createSeries():241 longitude_fix: 2 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:33,193Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:23:33,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:23:33,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:23:33,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:23:34,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:23:34,920Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:23:34,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:34,935Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:35,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:35,573Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:36,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:36,208Z lrauvNc4ToNetcdf.py createSeries():241 depth : 90 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:36,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:23:36,896Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 89 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:37,542Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:37,580Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 89 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:38,232Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:38,283Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 89 v_t values found before 2018-08-25 14:34:00 and after 2018-08-25 20:18:00 INFO 2020-11-12 15:23:38,927Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:23:38,928Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T143404/201808251434_201808252018.nc4 INFO 2020-11-12 15:23:40,351Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:23:40,353Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:23:40,354Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.284 0.0000792 -0.0000323 218 2.07 1.87 -2.89 2018-08-25 14:40:26.872013092 INFO 2020-11-12 15:23:40,359Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.340 -0.0057317 0.0027546 7130 48.41 -6.91 10.54 2018-08-25 15:28:52.044826984 INFO 2020-11-12 15:23:40,364Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.335 -0.0044711 0.0001608 6307 42.54 -0.46 0.70 2018-08-25 16:11:25.112857103 INFO 2020-11-12 15:23:40,369Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.341 -0.0009765 0.0004507 468 3.63 -15.06 22.98 2018-08-25 16:15:03.519710064 INFO 2020-11-12 15:23:40,374Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.340 -0.0041254 -0.0011940 6153 41.36 3.47 -5.35 2018-08-25 16:56:25.339685917 INFO 2020-11-12 15:23:40,379Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.294 0.0003627 0.0001098 208 1.79 -7.37 11.37 2018-08-25 16:58:13.159562111 INFO 2020-11-12 15:23:40,383Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.346 -0.0036212 0.0005500 6860 46.07 -1.42 2.21 2018-08-25 17:44:17.970807076 INFO 2020-11-12 15:23:40,389Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.339 -0.0006973 -0.0008233 319 2.82 34.84 -54.04 2018-08-25 17:47:07.790919065 INFO 2020-11-12 15:23:40,393Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.341 -0.0064987 0.0039061 6576 44.20 -10.71 16.38 2018-08-25 18:31:20.031739950 INFO 2020-11-12 15:23:40,398Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.343 -0.0001995 -0.0005917 897 6.50 11.03 -16.86 2018-08-25 18:37:50.589554071 INFO 2020-11-12 15:23:40,403Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.346 0.0001248 0.0010554 848 6.36 -20.11 30.77 2018-08-25 18:44:12.327670097 INFO 2020-11-12 15:23:40,407Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.325 -0.0007130 -0.0000273 371 3.16 1.05 -1.60 2018-08-25 18:47:22.367161989 INFO 2020-11-12 15:23:40,412Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.350 -0.0056730 0.0031168 6254 42.10 -9.11 13.72 2018-08-25 19:29:28.599468946 INFO 2020-11-12 15:23:40,417Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.335 -0.0003278 0.0004563 260 2.14 -26.22 39.49 2018-08-25 19:31:37.532886981 INFO 2020-11-12 15:23:40,421Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.289 -0.0057367 0.0026704 6191 41.75 -7.97 11.85 2018-08-25 20:13:22.969924927 INFO 2020-11-12 15:23:40,427Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.263 -0.0005178 0.0000392 510 3.90 -1.25 1.86 2018-08-25 20:17:17.358321905 INFO 2020-11-12 15:23:40,431Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.297 -0.0000330 0.0000119 95 0.73 -2.02 3.01 2018-08-25 20:18:01.523962021 INFO 2020-11-12 15:23:40,436Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.351 -0.0000110 0.0000108 38 0.25 -5.50 8.18 2018-08-25 20:18:16.669425011 INFO 2020-11-12 15:23:40,440Z lrauvNc4ToNetcdf.py nudge_coords():754 19: - - - 48 0.35 - - INFO 2020-11-12 15:23:40,440Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 49751 INFO 2020-11-12 15:23:40,468Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180825T133405/20180825T211838/data.csv INFO 2020-11-12 15:23:40,515Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:23:40,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:23:40,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T143404/201808251434_201808252018_2S_scieng.nc INFO 2020-11-12 15:23:40,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808251434_201808252018.nc4 INFO 2020-11-12 15:23:42,335Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T201838/201808252018_201808260401.nc4 file... INFO 2020-11-12 15:23:42,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808252018_201808260401.nc4 INFO 2020-11-12 15:23:43,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T201838/201808252018_201808260401.nc4 INFO 2020-11-12 15:23:43,866Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:44,765Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:45,636Z lrauvNc4ToNetcdf.py createSeries():241 depth : 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:46,512Z lrauvNc4ToNetcdf.py createSeries():241 time : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:47,397Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:48,269Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:49,140Z lrauvNc4ToNetcdf.py createSeries():241 depth : 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:50,012Z lrauvNc4ToNetcdf.py createSeries():241 time : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:50,883Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:51,762Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:52,625Z lrauvNc4ToNetcdf.py createSeries():241 depth : 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:53,495Z lrauvNc4ToNetcdf.py createSeries():241 time : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:54,360Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:55,230Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:56,089Z lrauvNc4ToNetcdf.py createSeries():241 depth : 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:56,947Z lrauvNc4ToNetcdf.py createSeries():241 time : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:23:57,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:23:58,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:23:58,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:23:59,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:23:59,299Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:23:59,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:23:59,404Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:00,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:00,250Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:00,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:00,841Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 5 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:01,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:01,440Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 5 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:02,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:02,045Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 5 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:02,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:02,736Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:02,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:02,857Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:24:02,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:24:02,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:24:02,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:24:02,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:24:02,894Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 1 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:02,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:02,931Z lrauvNc4ToNetcdf.py createSeries():241 platform_elevator_angle: 7 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:03,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:03,316Z lrauvNc4ToNetcdf.py createSeries():241 platform_mass_position: 1 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:03,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:03,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:04,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:04,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:04,750Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:05,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:05,592Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:06,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:06,436Z lrauvNc4ToNetcdf.py createSeries():241 depth : 12 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:07,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:07,334Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:08,176Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:08,214Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:09,062Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:09,100Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 13 v_t values found before 2018-08-25 20:18:00 and after 2018-08-26 04:01:00 INFO 2020-11-12 15:24:09,971Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:09,972Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T201838/201808252018_201808260401.nc4 INFO 2020-11-12 15:24:11,824Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:24:11,825Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:24:11,827Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.380 -0.0003063 0.0000133 321 2.49 -0.67 0.99 2018-08-25 20:33:24.395442009 INFO 2020-11-12 15:24:11,832Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.347 -0.0001632 0.0000500 349 2.87 -2.17 3.23 2018-08-25 20:36:16.872937918 INFO 2020-11-12 15:24:11,836Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.352 -0.0059459 0.0013930 6361 43.72 -3.96 5.90 2018-08-25 21:20:00.702157021 INFO 2020-11-12 15:24:11,842Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.352 0.0000973 0.0000945 1029 7.42 -1.58 2.36 2018-08-25 21:27:26.225347996 INFO 2020-11-12 15:24:11,846Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.323 -0.0003550 -0.0003243 1221 9.20 4.39 -6.53 2018-08-25 21:36:38.564958096 INFO 2020-11-12 15:24:11,851Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.351 0.0014610 0.0008888 980 7.50 -14.74 21.97 2018-08-25 21:44:08.814486027 INFO 2020-11-12 15:24:11,856Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.262 -0.0041537 0.0005931 4733 31.94 -2.31 3.44 2018-08-25 22:16:05.458853006 INFO 2020-11-12 15:24:11,861Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.320 -0.0000437 0.0000943 228 2.04 -5.76 8.58 2018-08-25 22:18:07.981487036 INFO 2020-11-12 15:24:11,865Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.336 -0.0024877 -0.0010430 4776 32.28 3.99 -5.99 2018-08-25 22:50:24.979964972 INFO 2020-11-12 15:24:11,870Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.346 -0.0001043 0.0002745 521 3.97 -8.54 12.82 2018-08-25 22:54:23.480220079 INFO 2020-11-12 15:24:11,875Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.364 -0.0023044 -0.0006250 4733 31.86 2.40 -3.64 2018-08-25 23:26:15.499418974 INFO 2020-11-12 15:24:11,880Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.344 -0.0011715 -0.0000298 154 1.31 2.79 -4.22 2018-08-25 23:27:34.517688036 INFO 2020-11-12 15:24:11,884Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.380 -0.0035210 -0.0002368 4690 31.54 0.91 -1.39 2018-08-25 23:59:07.531589985 INFO 2020-11-12 15:24:11,890Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.345 -0.0001512 -0.0002715 391 3.21 10.26 -15.69 2018-08-26 00:02:20.436959982 INFO 2020-11-12 15:24:11,894Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.354 -0.0035955 -0.0010931 4775 32.07 4.10 -6.32 2018-08-26 00:34:24.778033972 INFO 2020-11-12 15:24:11,899Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.350 0.0007092 0.0000637 228 2.11 -3.62 5.59 2018-08-26 00:36:31.943574905 INFO 2020-11-12 15:24:11,904Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.337 -0.0021819 -0.0016017 4605 30.89 6.17 -9.61 2018-08-26 01:07:25.875721931 INFO 2020-11-12 15:24:11,909Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.341 0.0001945 0.0002450 444 3.50 -8.34 12.99 2018-08-26 01:10:56.036814928 INFO 2020-11-12 15:24:11,913Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.338 -0.0016419 0.0010004 4767 31.97 -3.75 5.80 2018-08-26 01:42:54.877758026 INFO 2020-11-12 15:24:11,918Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.335 -0.0001425 -0.0000153 270 2.23 0.82 -1.28 2018-08-26 01:45:09.060908079 INFO 2020-11-12 15:24:11,923Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.336 -0.0023495 0.0022491 4946 33.23 -8.18 12.54 2018-08-26 02:18:23.048001051 INFO 2020-11-12 15:24:11,928Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.340 0.0000173 0.0000045 97 1.14 -0.48 0.73 2018-08-26 02:19:32.136059046 INFO 2020-11-12 15:24:11,933Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.075 -0.0050140 0.0031381 4778 32.07 -11.94 18.13 2018-08-26 02:51:36.936861038 INFO 2020-11-12 15:24:11,938Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.324 -0.0000360 -0.0000097 27 0.50 2.36 -3.59 2018-08-26 02:52:07.056183100 INFO 2020-11-12 15:24:11,942Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.297 -0.0011552 0.0011942 4829 32.41 -4.55 6.83 2018-08-26 03:24:32.023632050 INFO 2020-11-12 15:24:11,947Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.333 -0.0000872 -0.0000177 225 2.00 1.09 -1.63 2018-08-26 03:26:32.586625099 INFO 2020-11-12 15:24:11,952Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.332 -0.0018246 0.0019556 4667 31.49 -7.74 11.51 2018-08-26 03:58:02.236632109 INFO 2020-11-12 15:24:11,957Z lrauvNc4ToNetcdf.py nudge_coords():754 28: - - - 383 3.09 - - INFO 2020-11-12 15:24:11,957Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 65528 INFO 2020-11-12 15:24:11,987Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180825T191838/20180826T050108/data.csv INFO 2020-11-12 15:24:12,039Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:24:12,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:24:12,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180825T201838/201808252018_201808260401_2S_scieng.nc INFO 2020-11-12 15:24:12,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808252018_201808260401.nc4 INFO 2020-11-12 15:24:12,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040200/201808260402_201808260403.nc4 file... INFO 2020-11-12 15:24:12,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808260402_201808260403.nc4 INFO 2020-11-12 15:24:13,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040200/201808260402_201808260403.nc4 INFO 2020-11-12 15:24:13,868Z lrauvNc4ToNetcdf.py createSeries():241 depth : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:13,928Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,028Z lrauvNc4ToNetcdf.py createSeries():241 depth : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,087Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,201Z lrauvNc4ToNetcdf.py createSeries():241 depth : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,268Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,367Z lrauvNc4ToNetcdf.py createSeries():241 depth : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,426Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,468Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:14,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:24:14,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:24:14,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:24:14,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:24:14,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:24:14,485Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 21 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:14,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:14,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:14,506Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:14,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:14,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:14,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:14,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:24:14,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:24:14,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable time_fix empty so skipping INFO 2020-11-12 15:24:14,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude_fix empty so skipping INFO 2020-11-12 15:24:14,535Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude_fix empty so skipping INFO 2020-11-12 15:24:14,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:14,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:14,547Z lrauvNc4ToNetcdf.py createSeries():241 platform_mass_position: 16 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:14,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:14,563Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:14,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:24:14,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude empty so skipping INFO 2020-11-12 15:24:14,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude empty so skipping INFO 2020-11-12 15:24:14,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable depth empty so skipping INFO 2020-11-12 15:24:14,594Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 21 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,638Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:14,659Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 21 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,702Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:14,723Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 21 v_t values found before 2018-08-26 04:02:00 and after 2018-08-26 04:03:00 INFO 2020-11-12 15:24:14,766Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:14,767Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040200/201808260402_201808260403.nc4 INFO 2020-11-12 15:24:14,870Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-11-12 15:24:14,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1186 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-11-12 15:24:14,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1187 Not creating /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040200/201808260402_201808260403_2S_scieng.nc INFO 2020-11-12 15:24:15,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040308/201808260403_201808260418.nc4 file... INFO 2020-11-12 15:24:15,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808260403_201808260418.nc4 INFO 2020-11-12 15:24:16,015Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040308/201808260403_201808260418.nc4 INFO 2020-11-12 15:24:16,041Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,128Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,210Z lrauvNc4ToNetcdf.py createSeries():241 depth : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,291Z lrauvNc4ToNetcdf.py createSeries():241 time : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,372Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,452Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,541Z lrauvNc4ToNetcdf.py createSeries():241 depth : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,635Z lrauvNc4ToNetcdf.py createSeries():241 time : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,726Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,819Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,903Z lrauvNc4ToNetcdf.py createSeries():241 depth : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:16,988Z lrauvNc4ToNetcdf.py createSeries():241 time : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,070Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,151Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,232Z lrauvNc4ToNetcdf.py createSeries():241 depth : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,314Z lrauvNc4ToNetcdf.py createSeries():241 time : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,376Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:17,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable mass_concentration_of_oxygen_in_sea_water empty so skipping INFO 2020-11-12 15:24:17,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:24:17,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:24:17,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:24:17,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:24:17,392Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:17,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:17,425Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable OutputChl empty so skipping INFO 2020-11-12 15:24:17,428Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable Output470 empty so skipping INFO 2020-11-12 15:24:17,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable Output650 empty so skipping INFO 2020-11-12 15:24:17,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:17,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:17,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:24:17,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:24:17,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:24:17,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:24:17,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:24:17,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_buoyancy_position empty so skipping INFO 2020-11-12 15:24:17,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:17,475Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:17,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:17,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_propeller_rotation_rate empty so skipping INFO 2020-11-12 15:24:17,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:24:17,486Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:17,516Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,545Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:17,546Z lrauvNc4ToNetcdf.py createSeries():241 depth : 25 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:17,600Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 23 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,666Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:17,689Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 23 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,755Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:17,777Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 23 v_t values found before 2018-08-26 04:03:00 and after 2018-08-26 04:18:00 INFO 2020-11-12 15:24:17,843Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:17,844Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040308/201808260403_201808260418.nc4 INFO 2020-11-12 15:24:18,091Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:24:18,092Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:24:18,093Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.338 -0.0000480 -0.0000213 43 0.28 9.40 -13.97 2018-08-26 04:03:32.663852930 INFO 2020-11-12 15:24:18,098Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.239 0.0002733 0.0003298 157 1.26 -32.61 48.49 2018-08-26 04:04:48.685384989 INFO 2020-11-12 15:24:18,102Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.347 -0.0001568 0.0000687 951 6.96 -1.23 1.83 2018-08-26 04:11:46.753485918 INFO 2020-11-12 15:24:18,106Z lrauvNc4ToNetcdf.py nudge_coords():754 4: - - - 725 6.48 - - INFO 2020-11-12 15:24:18,106Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 1876 INFO 2020-11-12 15:24:18,129Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T030308/20180826T051815/data.csv INFO 2020-11-12 15:24:18,162Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:24:18,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['PAR', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:24:18,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T040308/201808260403_201808260418_2S_scieng.nc INFO 2020-11-12 15:24:18,632Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808260403_201808260418.nc4 INFO 2020-11-12 15:24:19,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 file... INFO 2020-11-12 15:24:19,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:20,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:20,932Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:21,446Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:21,931Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:22,420Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:22,910Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:23,395Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:23,878Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:24,371Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:24,864Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:25,343Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:25,847Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:26,336Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:26,841Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:27,322Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:27,809Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:28,292Z lrauvNc4ToNetcdf.py createSeries():241 time : 24 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:28,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:28,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:24:29,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:29,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:29,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:29,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:29,576Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:30,021Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:30,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:30,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:31,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:31,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:31,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:31,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:31,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:24:31,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:24:32,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:24:32,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:24:32,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:24:32,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:32,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:32,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:32,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:32,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:32,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:32,942Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:33,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:33,390Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:33,838Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:33,842Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:34,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:34,326Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:34,800Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:34,830Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:35,300Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:35,330Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 21 v_t values found before 2018-08-26 04:19:00 and after 2018-08-26 08:28:00 INFO 2020-11-12 15:24:35,807Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:35,808Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:36,873Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:24:36,875Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:24:36,877Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.341 -0.0001395 -0.0001147 229 1.53 9.37 -13.93 2018-08-26 04:22:12.471481085 INFO 2020-11-12 15:24:36,881Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.284 0.0001062 0.0001848 140 1.28 -17.93 26.67 2018-08-26 04:23:29.915883064 INFO 2020-11-12 15:24:36,886Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.376 -0.0000377 0.0001619 918 6.90 -2.92 4.35 2018-08-26 04:30:24.150433064 INFO 2020-11-12 15:24:36,891Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.360 -0.0000130 0.0000093 143 1.63 -0.71 1.06 2018-08-26 04:32:02.195847988 INFO 2020-11-12 15:24:36,895Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.296 -0.0000525 0.0001339 738 5.74 -2.91 4.32 2018-08-26 04:37:47.000670910 INFO 2020-11-12 15:24:36,900Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.335 -0.0000285 0.0000490 210 2.01 -3.04 4.53 2018-08-26 04:39:47.734954119 INFO 2020-11-12 15:24:36,905Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.348 -0.0010107 -0.0009893 4904 32.78 3.72 -5.59 2018-08-26 05:12:35.068607092 INFO 2020-11-12 15:24:36,910Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.263 -0.0000502 0.0001085 159 1.44 -9.31 14.01 2018-08-26 05:14:01.605612040 INFO 2020-11-12 15:24:36,915Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.338 0.0019284 -0.0008416 4634 30.97 3.31 -5.04 2018-08-26 05:44:59.850044966 INFO 2020-11-12 15:24:36,921Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.388 -0.0031363 -0.0003172 259 1.93 20.03 -30.48 2018-08-26 05:46:56.049374104 INFO 2020-11-12 15:24:36,925Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.351 -0.0000390 0.0000042 120 0.85 -0.60 0.91 2018-08-26 05:47:47.417314053 INFO 2020-11-12 15:24:36,930Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.337 -0.0000227 0.0001003 1024 8.12 -1.50 2.29 2018-08-26 05:55:55.060625076 INFO 2020-11-12 15:24:36,934Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.358 0.0001130 0.0034788 939 6.80 -62.04 94.80 2018-08-26 06:02:43.446237087 INFO 2020-11-12 15:24:36,939Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.347 -0.0000667 -0.0033100 484 3.80 106.01 -161.37 2018-08-26 06:06:31.979743958 INFO 2020-11-12 15:24:36,944Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.332 -0.0001295 -0.0000442 165 1.72 3.14 -4.77 2018-08-26 06:08:15.295010090 INFO 2020-11-12 15:24:36,948Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.257 -0.0025632 -0.0007858 4605 30.79 3.06 -4.73 2018-08-26 06:39:03.354795933 INFO 2020-11-12 15:24:36,954Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.347 0.0011420 -0.0000433 137 1.19 4.37 -6.75 2018-08-26 06:40:14.999758959 INFO 2020-11-12 15:24:36,958Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.349 -0.0011781 -0.0012978 4627 30.89 4.95 -7.78 2018-08-26 07:11:08.960860968 INFO 2020-11-12 15:24:36,963Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.363 0.0001704 0.0003394 927 6.95 -5.75 9.05 2018-08-26 07:18:06.411315918 INFO 2020-11-12 15:24:36,969Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.323 0.0012642 0.0016773 149 1.57 -125.91 198.58 2018-08-26 07:19:40.835201025 INFO 2020-11-12 15:24:36,973Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.347 0.0000872 -0.0003815 4742 31.70 1.42 -2.23 2018-08-26 07:51:23.173784018 INFO 2020-11-12 15:24:36,978Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.273 0.0000590 0.0000167 35 0.68 -2.91 4.55 2018-08-26 07:52:04.263184071 INFO 2020-11-12 15:24:36,983Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.312 0.0012038 0.0012082 4649 31.10 -4.62 7.20 2018-08-26 08:23:10.397422075 INFO 2020-11-12 15:24:36,988Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.346 -0.0000357 -0.0000350 78 0.56 7.46 -11.62 2018-08-26 08:23:44.266453027 INFO 2020-11-12 15:24:36,992Z lrauvNc4ToNetcdf.py nudge_coords():754 25: - - - 526 4.50 - - INFO 2020-11-12 15:24:36,992Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 35541 INFO 2020-11-12 15:24:37,018Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T031928/20180826T092815/data.csv INFO 2020-11-12 15:24:37,065Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:24:37,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:24:37,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T041916/201808260419_201808260828_2S_scieng.nc INFO 2020-11-12 15:24:37,732Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808260419_201808260828.nc4 INFO 2020-11-12 15:24:38,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T082815/201808260828_201808261137.nc4 file... INFO 2020-11-12 15:24:38,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808260828_201808261137.nc4 INFO 2020-11-12 15:24:39,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T082815/201808260828_201808261137.nc4 INFO 2020-11-12 15:24:47,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:47,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:24:47,850Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:47,953Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:47,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:24:48,004Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:24:48,504Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:48,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:48,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:49,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:49,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:49,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:49,337Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:49,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:24:49,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:24:49,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:24:49,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:24:49,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:24:49,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:49,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:49,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:49,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:49,637Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:49,643Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:50,140Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:50,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:51,141Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:24:51,677Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:52,208Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:52,741Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:52,742Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T082815/201808260828_201808261137.nc4 INFO 2020-11-12 15:24:53,600Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:24:53,602Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:24:53,603Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.304 -0.0002033 0.0001233 982 7.74 -1.90 2.95 2018-08-26 08:42:58.283533096 INFO 2020-11-12 15:24:53,608Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.346 -0.0003845 0.0005483 1813 12.77 -5.11 7.96 2018-08-26 08:55:44.718357086 INFO 2020-11-12 15:24:53,613Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.278 -0.0000762 0.0002040 1145 8.46 -2.87 4.47 2018-08-26 09:04:12.702127934 INFO 2020-11-12 15:24:53,618Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.342 -0.0003871 0.0000610 1735 11.88 -0.61 0.95 2018-08-26 09:16:05.699428082 INFO 2020-11-12 15:24:53,622Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.325 -0.0006602 0.0000080 2545 17.77 -0.05 0.08 2018-08-26 09:33:52.155891895 INFO 2020-11-12 15:24:53,627Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.309 -0.0004080 0.0003769 3856 26.67 -1.68 2.62 2018-08-26 10:00:32.959846973 INFO 2020-11-12 15:24:53,632Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.353 -0.0002768 0.0000727 1317 9.73 -0.89 1.38 2018-08-26 10:10:17.068380117 INFO 2020-11-12 15:24:53,637Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.083 -0.0000747 0.0000868 890 6.44 -1.60 2.50 2018-08-26 10:16:44.009160995 INFO 2020-11-12 15:24:53,641Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.350 -0.0027658 0.0004464 4245 29.09 -1.83 2.84 2018-08-26 10:45:49.386344910 INFO 2020-11-12 15:24:53,647Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.340 -0.0010590 0.0000600 1519 11.25 -0.63 0.99 2018-08-26 10:57:04.845808029 INFO 2020-11-12 15:24:53,651Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.351 0.0002168 0.0002092 818 6.33 -3.93 6.12 2018-08-26 11:03:25.287444115 INFO 2020-11-12 15:24:53,656Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.325 -0.0018212 -0.0005555 3091 20.76 3.18 -4.96 2018-08-26 11:24:11.178478003 INFO 2020-11-12 15:24:53,661Z lrauvNc4ToNetcdf.py nudge_coords():754 13: - - - 1621 12.38 - - INFO 2020-11-12 15:24:53,661Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 25577 INFO 2020-11-12 15:24:53,689Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T072815/20180826T123634/data.csv INFO 2020-11-12 15:24:53,724Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:24:53,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:24:54,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T082815/201808260828_201808261137_2S_scieng.nc INFO 2020-11-12 15:24:54,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808260828_201808261137.nc4 INFO 2020-11-12 15:24:54,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T113803/201808261138_201808261409.nc4 file... INFO 2020-11-12 15:24:54,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261138_201808261409.nc4 INFO 2020-11-12 15:24:55,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T113803/201808261138_201808261409.nc4 INFO 2020-11-12 15:24:55,906Z lrauvNc4ToNetcdf.py createSeries():241 depth : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:56,216Z lrauvNc4ToNetcdf.py createSeries():241 time : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:56,558Z lrauvNc4ToNetcdf.py createSeries():241 depth : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:56,861Z lrauvNc4ToNetcdf.py createSeries():241 time : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:57,205Z lrauvNc4ToNetcdf.py createSeries():241 depth : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:57,507Z lrauvNc4ToNetcdf.py createSeries():241 time : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:57,849Z lrauvNc4ToNetcdf.py createSeries():241 depth : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:58,155Z lrauvNc4ToNetcdf.py createSeries():241 time : 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:58,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:24:58,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:24:58,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:24:58,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:24:58,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:24:58,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:24:58,463Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 97 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:58,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:24:58,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:24:58,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:24:58,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:24:58,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:24:58,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:58,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:24:58,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:24:58,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:24:58,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable time_fix empty so skipping INFO 2020-11-12 15:24:58,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude_fix empty so skipping INFO 2020-11-12 15:24:58,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude_fix empty so skipping INFO 2020-11-12 15:24:58,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:24:58,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:24:58,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:24:58,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:24:58,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:24:58,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:24:58,803Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude empty so skipping INFO 2020-11-12 15:24:58,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude empty so skipping INFO 2020-11-12 15:24:58,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable depth empty so skipping INFO 2020-11-12 15:24:58,834Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 90 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:59,112Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:59,139Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 90 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:59,427Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:59,454Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 90 v_t values found before 2018-08-26 11:38:00 and after 2018-08-26 14:09:00 INFO 2020-11-12 15:24:59,732Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:24:59,733Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T113803/201808261138_201808261409.nc4 INFO 2020-11-12 15:24:59,844Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-11-12 15:24:59,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1186 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-11-12 15:24:59,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1187 Not creating /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T113803/201808261138_201808261409_2S_scieng.nc INFO 2020-11-12 15:25:00,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T141141/201808261411_201808261703.nc4 file... INFO 2020-11-12 15:25:00,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261411_201808261703.nc4 INFO 2020-11-12 15:25:01,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T141141/201808261411_201808261703.nc4 INFO 2020-11-12 15:25:01,493Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:01,837Z lrauvNc4ToNetcdf.py createSeries():241 time : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:02,250Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:02,639Z lrauvNc4ToNetcdf.py createSeries():241 time : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:03,058Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:03,397Z lrauvNc4ToNetcdf.py createSeries():241 time : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:03,773Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:04,107Z lrauvNc4ToNetcdf.py createSeries():241 time : 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:04,421Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:25:04,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:25:04,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:25:04,441Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:25:04,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:25:04,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:25:04,449Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:04,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:25:04,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:25:04,755Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:25:04,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:25:04,765Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:25:04,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:04,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:04,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:25:04,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:25:04,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable time_fix empty so skipping INFO 2020-11-12 15:25:04,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude_fix empty so skipping INFO 2020-11-12 15:25:04,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude_fix empty so skipping INFO 2020-11-12 15:25:04,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:25:04,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:25:04,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:25:04,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:25:04,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:25:04,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:25:04,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude empty so skipping INFO 2020-11-12 15:25:04,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude empty so skipping INFO 2020-11-12 15:25:04,830Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable depth empty so skipping INFO 2020-11-12 15:25:04,857Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 25 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:05,174Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:05,200Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 25 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:05,519Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:05,546Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 25 v_t values found before 2018-08-26 14:11:00 and after 2018-08-26 17:03:00 INFO 2020-11-12 15:25:05,859Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:05,860Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T141141/201808261411_201808261703.nc4 INFO 2020-11-12 15:25:05,977Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-11-12 15:25:05,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1186 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-11-12 15:25:05,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1187 Not creating /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T141141/201808261411_201808261703_2S_scieng.nc INFO 2020-11-12 15:25:06,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T170501/201808261705_201808261724.nc4 file... INFO 2020-11-12 15:25:06,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261705_201808261724.nc4 INFO 2020-11-12 15:25:07,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T170501/201808261705_201808261724.nc4 INFO 2020-11-12 15:25:07,277Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,335Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,392Z lrauvNc4ToNetcdf.py createSeries():241 depth : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,482Z lrauvNc4ToNetcdf.py createSeries():241 time : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,571Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,628Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,684Z lrauvNc4ToNetcdf.py createSeries():241 depth : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,774Z lrauvNc4ToNetcdf.py createSeries():241 time : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,864Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,920Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:07,976Z lrauvNc4ToNetcdf.py createSeries():241 depth : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,067Z lrauvNc4ToNetcdf.py createSeries():241 time : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,158Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,215Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,271Z lrauvNc4ToNetcdf.py createSeries():241 depth : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,360Z lrauvNc4ToNetcdf.py createSeries():241 time : 121 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:25:08,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:25:08,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:25:08,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:25:08,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:25:08,449Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:25:08,451Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 122 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,490Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:25:08,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:25:08,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:25:08,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:25:08,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:25:08,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:08,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:08,522Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:25:08,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:25:08,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:25:08,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:25:08,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:25:08,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:25:08,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:25:08,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:25:08,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:25:08,570Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:25:08,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:25:08,573Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable longitude empty so skipping INFO 2020-11-12 15:25:08,578Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,582Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable latitude empty so skipping INFO 2020-11-12 15:25:08,583Z lrauvNc4ToNetcdf.py createSeries():241 depth : 58 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable depth empty so skipping INFO 2020-11-12 15:25:08,609Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 117 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,684Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:08,705Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 117 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,779Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:08,800Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 117 v_t values found before 2018-08-26 17:05:00 and after 2018-08-26 17:24:00 INFO 2020-11-12 15:25:08,874Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:08,874Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T170501/201808261705_201808261724.nc4 INFO 2020-11-12 15:25:09,066Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:25:09,067Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:25:09,068Z lrauvNc4ToNetcdf.py nudge_coords():754 1: - - - 58 0.44 - - INFO 2020-11-12 15:25:09,069Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 58 INFO 2020-11-12 15:25:09,088Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T160512/20180826T182453/data.csv INFO 2020-11-12 15:25:09,127Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:25:09,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:25:09,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T170501/201808261705_201808261724_2S_scieng.nc INFO 2020-11-12 15:25:09,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808261705_201808261724.nc4 INFO 2020-11-12 15:25:10,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T172605/201808261726_201808261822.nc4 file... INFO 2020-11-12 15:25:10,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261726_201808261822.nc4 INFO 2020-11-12 15:25:11,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T172605/201808261726_201808261822.nc4 INFO 2020-11-12 15:25:11,101Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:11,268Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:11,419Z lrauvNc4ToNetcdf.py createSeries():241 depth : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:11,586Z lrauvNc4ToNetcdf.py createSeries():241 time : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:11,776Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:11,967Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,137Z lrauvNc4ToNetcdf.py createSeries():241 depth : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,325Z lrauvNc4ToNetcdf.py createSeries():241 time : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,491Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,661Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,830Z lrauvNc4ToNetcdf.py createSeries():241 depth : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:12,984Z lrauvNc4ToNetcdf.py createSeries():241 time : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,136Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,281Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,430Z lrauvNc4ToNetcdf.py createSeries():241 depth : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,578Z lrauvNc4ToNetcdf.py createSeries():241 time : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:25:13,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:25:13,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:25:13,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:25:13,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:25:13,727Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:25:13,728Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:13,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:25:13,831Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:25:13,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:25:13,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:25:13,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:25:13,849Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:13,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:13,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:25:13,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:25:13,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:25:13,889Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:25:13,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:25:13,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:25:13,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:25:13,915Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:25:13,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:25:13,928Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:25:13,930Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:25:13,932Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:14,122Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:14,218Z lrauvNc4ToNetcdf.py createSeries():241 depth : 81 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,315Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:14,342Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 66 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,474Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:14,499Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 66 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,629Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:14,652Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 66 v_t values found before 2018-08-26 17:26:00 and after 2018-08-26 18:22:00 INFO 2020-11-12 15:25:14,783Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:14,783Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T172605/201808261726_201808261822.nc4 INFO 2020-11-12 15:25:15,157Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:25:15,158Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:25:15,160Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.354 0.0000095 -0.0000097 40 0.26 4.42 -6.92 2018-08-26 17:28:28.234661102 INFO 2020-11-12 15:25:15,164Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.320 0.0000597 -0.0000383 177 1.33 3.40 -5.32 2018-08-26 17:29:48.734028101 INFO 2020-11-12 15:25:15,169Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.348 0.0003873 -0.0002488 836 6.03 4.89 -7.64 2018-08-26 17:35:50.986695051 INFO 2020-11-12 15:25:15,173Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.342 0.0010217 -0.0001637 1221 10.83 1.79 -2.80 2018-08-26 17:46:41.123724937 INFO 2020-11-12 15:25:15,178Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.363 0.0000058 -0.0008468 846 6.18 16.25 -25.39 2018-08-26 17:52:52.421475887 INFO 2020-11-12 15:25:15,182Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.352 0.0004023 -0.0002823 830 5.99 5.59 -8.73 2018-08-26 17:58:52.305470943 INFO 2020-11-12 15:25:15,187Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.361 0.0001780 -0.0003455 840 6.02 6.81 -10.64 2018-08-26 18:04:53.844357967 INFO 2020-11-12 15:25:15,191Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.345 -0.0000633 -0.0001678 833 5.99 3.33 -5.20 2018-08-26 18:10:53.401753902 INFO 2020-11-12 15:25:15,196Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.351 0.0002630 -0.0007492 898 6.51 13.68 -21.33 2018-08-26 18:17:24.267600059 INFO 2020-11-12 15:25:15,200Z lrauvNc4ToNetcdf.py nudge_coords():754 10: - - - 716 5.13 - - INFO 2020-11-12 15:25:15,200Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 7237 INFO 2020-11-12 15:25:15,223Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T162616/20180826T192232/data.csv INFO 2020-11-12 15:25:15,263Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:25:15,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:25:15,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T172605/201808261726_201808261822_2S_scieng.nc INFO 2020-11-12 15:25:15,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808261726_201808261822.nc4 INFO 2020-11-12 15:25:16,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T182335/201808261823_201808261904.nc4 file... INFO 2020-11-12 15:25:16,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261823_201808261904.nc4 INFO 2020-11-12 15:25:17,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T182335/201808261823_201808261904.nc4 INFO 2020-11-12 15:25:17,189Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,330Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,463Z lrauvNc4ToNetcdf.py createSeries():241 depth : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,589Z lrauvNc4ToNetcdf.py createSeries():241 time : 61 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,726Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,845Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:17,979Z lrauvNc4ToNetcdf.py createSeries():241 depth : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,115Z lrauvNc4ToNetcdf.py createSeries():241 time : 61 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,242Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,370Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,502Z lrauvNc4ToNetcdf.py createSeries():241 depth : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,635Z lrauvNc4ToNetcdf.py createSeries():241 time : 61 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,768Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:18,901Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,031Z lrauvNc4ToNetcdf.py createSeries():241 depth : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,163Z lrauvNc4ToNetcdf.py createSeries():241 time : 61 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,279Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:25:19,293Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:25:19,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:25:19,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:25:19,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:25:19,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:25:19,304Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:25:19,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:25:19,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:25:19,407Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:25:19,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:25:19,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:19,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:25:19,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:25:19,445Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:25:19,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:25:19,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:25:19,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:25:19,466Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:25:19,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:25:19,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:25:19,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:25:19,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:25:19,497Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:25:19,498Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,580Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:19,582Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:19,666Z lrauvNc4ToNetcdf.py createSeries():241 depth : 60 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:25:19,785Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 58 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:19,910Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:19,934Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 58 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:20,064Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:20,092Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 58 v_t values found before 2018-08-26 18:23:00 and after 2018-08-26 19:04:00 INFO 2020-11-12 15:25:20,222Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:25:20,222Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T182335/201808261823_201808261904.nc4 INFO 2020-11-12 15:25:20,573Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:25:20,575Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:25:20,576Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.338 0.0010138 -0.0007688 219 1.46 62.75 -97.70 2018-08-26 18:26:38.600080967 INFO 2020-11-12 15:25:20,581Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.331 0.0002750 0.0006035 149 1.30 -55.14 85.92 2018-08-26 18:27:57.145687103 INFO 2020-11-12 15:25:20,585Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.352 -0.0115827 0.0104312 898 6.38 -191.86 302.74 2018-08-26 18:34:20.618112087 INFO 2020-11-12 15:25:20,590Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.349 -0.0191933 0.0166740 587 4.50 -426.15 686.49 2018-08-26 18:38:51.070231915 INFO 2020-11-12 15:25:20,594Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.361 -0.0111697 0.0098183 362 2.53 -441.28 719.82 2018-08-26 18:41:23.141005039 INFO 2020-11-12 15:25:20,598Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.349 -0.0134295 0.0148415 906 6.68 -247.53 411.69 2018-08-26 18:48:04.346229076 INFO 2020-11-12 15:25:20,603Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.354 0.0050395 0.0022295 860 6.22 -39.80 66.40 2018-08-26 18:54:18.101106882 INFO 2020-11-12 15:25:20,607Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.343 -0.0005475 -0.0001202 1053 7.49 1.78 -2.97 2018-08-26 19:01:47.870515108 INFO 2020-11-12 15:25:20,612Z lrauvNc4ToNetcdf.py nudge_coords():754 9: - - - 353 2.68 - - INFO 2020-11-12 15:25:20,612Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 5387 INFO 2020-11-12 15:25:20,635Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T172346/20180826T200429/data.csv INFO 2020-11-12 15:25:20,667Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:25:20,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:25:21,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T182335/201808261823_201808261904_2S_scieng.nc INFO 2020-11-12 15:25:21,672Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808261823_201808261904.nc4 INFO 2020-11-12 15:25:24,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T190429/201808261904_201808271201.nc4 file... INFO 2020-11-12 15:25:24,512Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808261904_201808271201.nc4 INFO 2020-11-12 15:25:30,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T190429/201808261904_201808271201.nc4 INFO 2020-11-12 15:25:30,407Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:32,209Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:34,018Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:35,838Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:37,641Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:39,443Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:41,252Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:43,061Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:44,873Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:46,660Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:48,448Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:50,239Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:52,037Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:53,813Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:55,618Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:57,392Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:59,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:25:59,236Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 4 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:25:59,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:25:59,928Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 3 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:00,650Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:26:00,657Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 3 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:01,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:26:01,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:26:01,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:26:01,829Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:03,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:26:03,650Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:05,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:05,029Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 5 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:06,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:26:06,450Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 5 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:07,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:26:07,834Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 5 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:09,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:26:09,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:09,662Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:09,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:26:09,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:26:09,706Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:26:09,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:26:09,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:26:09,722Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:09,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:26:10,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:26:10,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:26:10,534Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 8 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:10,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:26:13,317Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:26:13,325Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:13,339Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:15,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:15,174Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:16,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:16,999Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:18,792Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:18,842Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:20,681Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:20,721Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:22,547Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:22,584Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 11 v_t values found before 2018-08-26 19:04:00 and after 2018-08-27 12:01:00 INFO 2020-11-12 15:26:24,431Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:24,433Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T190429/201808261904_201808271201.nc4 INFO 2020-11-12 15:26:28,119Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:26:28,122Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 28717 191.75 - - - INFO 2020-11-12 15:26:28,124Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.241 -0.0004525 0.0001655 645 5.66 -3.23 5.42 2018-08-26 22:23:38.920672894 INFO 2020-11-12 15:26:28,129Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.342 -0.0000252 0.0000103 41 0.27 -4.29 7.18 2018-08-26 22:23:55.212476969 INFO 2020-11-12 15:26:28,134Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.384 -0.0002660 -0.0002130 401 3.16 7.46 -12.50 2018-08-26 22:27:05.019592047 INFO 2020-11-12 15:26:28,139Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.288 -0.0002022 0.0003737 292 2.62 -15.79 26.47 2018-08-26 22:29:42.398710966 INFO 2020-11-12 15:26:28,144Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.320 -0.0022753 -0.0002074 2392 16.04 1.43 -2.40 2018-08-26 22:45:45.031455994 INFO 2020-11-12 15:26:28,149Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.320 -0.0000423 -0.0000075 159 1.17 0.71 -1.19 2018-08-26 22:46:55.425842047 INFO 2020-11-12 15:26:28,154Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.481 -0.0000127 0.0000118 45 0.35 -3.69 6.18 2018-08-26 22:47:17.084738970 INFO 2020-11-12 15:26:28,158Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.345 -0.0004085 0.0001793 611 5.19 -3.82 6.40 2018-08-26 22:52:29.021343946 INFO 2020-11-12 15:26:28,163Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.278 -0.0000808 -0.0008973 4723 31.80 3.08 -5.23 2018-08-26 23:24:17.459096909 INFO 2020-11-12 15:26:28,169Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.297 -0.0001202 0.0000902 128 1.22 -8.07 13.69 2018-08-26 23:25:31.042032003 INFO 2020-11-12 15:26:28,174Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.266 -0.0000495 -0.0008147 4653 31.42 2.79 -4.80 2018-08-26 23:56:56.477535009 INFO 2020-11-12 15:26:28,179Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.361 -0.0001935 0.0002295 218 1.95 -12.66 21.77 2018-08-26 23:58:54.001368046 INFO 2020-11-12 15:26:28,184Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.250 0.0000138 -0.0009725 4611 30.98 3.34 -5.82 2018-08-27 00:29:53.512523890 INFO 2020-11-12 15:26:28,189Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.351 -0.0003680 0.0003630 549 4.71 -8.19 14.29 2018-08-27 00:34:36.296367884 INFO 2020-11-12 15:26:28,194Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.343 0.0015115 0.0002985 903 6.56 -4.83 8.44 2018-08-27 00:41:10.113413095 INFO 2020-11-12 15:26:28,199Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.272 -0.0020445 0.0002883 266 2.24 -13.68 23.89 2018-08-27 00:43:24.781872034 INFO 2020-11-12 15:26:28,204Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.335 -0.0001318 0.0001162 250 2.33 -5.30 9.25 2018-08-27 00:45:44.775614977 INFO 2020-11-12 15:26:28,209Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.275 -0.0006607 0.0008233 2384 15.99 -5.45 9.54 2018-08-27 01:01:44.419569969 INFO 2020-11-12 15:26:28,215Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.335 -0.0001662 -0.0002312 191 1.69 14.52 -25.40 2018-08-27 01:03:25.913717985 INFO 2020-11-12 15:26:28,220Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.350 -0.0011504 0.0005731 2362 15.83 -3.83 6.71 2018-08-27 01:19:16.164521933 INFO 2020-11-12 15:26:28,225Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.326 0.0000818 0.0000107 143 1.06 -1.06 1.86 2018-08-27 01:20:20.415956020 INFO 2020-11-12 15:26:28,230Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.203 -0.0150535 0.0031048 20739 138.34 -2.37 4.16 2018-08-27 03:38:40.938700914 INFO 2020-11-12 15:26:28,237Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.339 -0.0002625 0.0002760 470 4.24 -6.86 12.05 2018-08-27 03:42:55.872190952 INFO 2020-11-12 15:26:28,242Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.291 -0.0000085 0.0000170 41 0.27 -6.75 11.85 2018-08-27 03:43:12.299685001 INFO 2020-11-12 15:26:28,247Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.298 -0.0001397 0.0003432 862 6.37 -5.68 9.98 2018-08-27 03:49:34.892703056 INFO 2020-11-12 15:26:28,252Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.338 -0.0000877 0.0001805 160 1.68 -11.36 19.97 2018-08-27 03:51:15.781804085 INFO 2020-11-12 15:26:28,257Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.330 -0.0010863 -0.0006757 1772 12.26 5.81 -10.21 2018-08-27 04:03:31.844775915 INFO 2020-11-12 15:26:28,262Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.355 0.0000051 0.0000127 14 0.23 -5.85 10.28 2018-08-27 04:03:45.911467075 INFO 2020-11-12 15:26:28,267Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.350 0.0003427 -0.0003405 174 1.93 18.61 -32.68 2018-08-27 04:05:42.157289982 INFO 2020-11-12 15:26:28,272Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.301 -0.0004680 0.0007460 967 7.15 -11.00 19.34 2018-08-27 04:12:51.393459082 INFO 2020-11-12 15:26:28,277Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.102 0.0000212 0.0000252 30 0.56 -4.72 8.29 2018-08-27 04:13:25.536437988 INFO 2020-11-12 15:26:28,282Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.356 0.0000170 0.0000675 166 1.76 -4.05 7.12 2018-08-27 04:15:11.102300882 INFO 2020-11-12 15:26:28,287Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.355 -0.0044625 0.0005511 4607 30.94 -1.84 3.30 2018-08-27 04:46:07.820363045 INFO 2020-11-12 15:26:28,292Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.325 0.0000645 0.0003310 477 3.86 -8.85 15.87 2018-08-27 04:50:00.086859941 INFO 2020-11-12 15:26:28,297Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.361 -0.0030230 0.0012865 4674 31.26 -4.17 7.63 2018-08-27 05:21:16.133574009 INFO 2020-11-12 15:26:28,303Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.315 -0.0001542 -0.0000028 58 0.71 0.40 -0.74 2018-08-27 05:21:59.252228022 INFO 2020-11-12 15:26:28,308Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.343 -0.0024011 0.0045443 5061 34.14 -13.33 24.66 2018-08-27 05:56:08.317804098 INFO 2020-11-12 15:26:28,314Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.330 0.0000088 0.0000097 26 0.54 -1.80 3.34 2018-08-27 05:56:40.919806004 INFO 2020-11-12 15:26:28,319Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.318 -0.0023932 -0.0026225 4606 30.81 8.61 -15.77 2018-08-27 06:27:29.696626902 INFO 2020-11-12 15:26:28,324Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.318 -0.0025738 0.0004288 481 3.84 -11.29 20.69 2018-08-27 06:31:20.548126936 INFO 2020-11-12 15:26:28,330Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.349 -0.0000464 0.0010956 4829 32.51 -3.40 6.24 2018-08-27 07:03:51.590600014 INFO 2020-11-12 15:26:28,336Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.342 0.0000197 0.0000893 108 1.14 -7.87 14.47 2018-08-27 07:05:00.699961901 INFO 2020-11-12 15:26:28,341Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.349 -0.0016005 0.0010087 4670 31.35 -3.24 5.96 2018-08-27 07:36:21.902748108 INFO 2020-11-12 15:26:28,346Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.287 0.0000700 0.0000033 38 0.49 -0.69 1.26 2018-08-27 07:36:51.776254892 INFO 2020-11-12 15:26:28,352Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 0.237 -0.0027242 -0.0002709 4723 31.73 0.86 -1.58 2018-08-27 08:08:35.767600060 INFO 2020-11-12 15:26:28,357Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.301 -0.0002332 0.0005617 294 2.65 -21.33 39.21 2018-08-27 08:11:15.337057114 INFO 2020-11-12 15:26:28,363Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.353 -0.0044796 0.0002777 4785 31.94 -0.88 1.61 2018-08-27 08:43:11.811176062 INFO 2020-11-12 15:26:28,368Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.252 0.0022485 0.0005917 264 2.45 -24.37 44.80 2018-08-27 08:45:39.054757118 INFO 2020-11-12 15:26:28,374Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.362 -0.0023992 0.0003691 4971 33.31 -1.12 2.05 2018-08-27 09:18:57.903433084 INFO 2020-11-12 15:26:28,380Z lrauvNc4ToNetcdf.py nudge_coords():724 49: 0.329 0.0000042 0.0000117 109 1.09 -1.07 1.97 2018-08-27 09:20:04.049055099 INFO 2020-11-12 15:26:28,385Z lrauvNc4ToNetcdf.py nudge_coords():724 50: 0.306 -0.0019704 0.0003918 4705 31.48 -1.25 2.31 2018-08-27 09:51:33.276793957 INFO 2020-11-12 15:26:28,391Z lrauvNc4ToNetcdf.py nudge_coords():724 51: 0.299 0.0000350 -0.0000348 203 2.06 1.70 -3.13 2018-08-27 09:53:37.457940102 INFO 2020-11-12 15:26:28,396Z lrauvNc4ToNetcdf.py nudge_coords():724 52: 0.272 -0.0025530 0.0008792 4651 31.16 -2.85 5.23 2018-08-27 10:24:47.236414909 INFO 2020-11-12 15:26:28,402Z lrauvNc4ToNetcdf.py nudge_coords():724 53: 0.360 0.0002170 0.0000465 374 3.24 -1.45 2.66 2018-08-27 10:28:01.975322962 INFO 2020-11-12 15:26:28,408Z lrauvNc4ToNetcdf.py nudge_coords():724 54: 0.328 -0.0018220 0.0008590 4626 31.05 -2.79 5.13 2018-08-27 10:59:05.539616108 INFO 2020-11-12 15:26:28,413Z lrauvNc4ToNetcdf.py nudge_coords():724 55: 0.319 -0.0000028 -0.0000332 34 0.58 5.78 -10.62 2018-08-27 10:59:40.647583008 INFO 2020-11-12 15:26:28,419Z lrauvNc4ToNetcdf.py nudge_coords():724 56: 0.285 -0.0017741 0.0006064 4645 31.10 -1.97 3.61 2018-08-27 11:30:47.301248074 INFO 2020-11-12 15:26:28,425Z lrauvNc4ToNetcdf.py nudge_coords():724 57: 0.346 -0.0002643 0.0007378 834 6.52 -11.40 20.96 2018-08-27 11:37:19.032030106 INFO 2020-11-12 15:26:28,430Z lrauvNc4ToNetcdf.py nudge_coords():724 58: 0.348 0.0002030 0.0000603 371 3.54 -1.72 3.15 2018-08-27 11:40:52.085354090 INFO 2020-11-12 15:26:28,436Z lrauvNc4ToNetcdf.py nudge_coords():724 59: 0.342 0.0002298 0.0000885 439 4.43 -2.01 3.70 2018-08-27 11:45:18.447666883 INFO 2020-11-12 15:26:28,441Z lrauvNc4ToNetcdf.py nudge_coords():754 61: - - - 2349 15.75 - - INFO 2020-11-12 15:26:28,442Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 148091 INFO 2020-11-12 15:26:28,464Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180826T180429/20180827T130104/data.csv INFO 2020-11-12 15:26:28,519Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database WARNING 2020-11-12 15:26:28,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1174 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2020-11-12 15:26:28,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1175 Overwriting interpolated repeated values with time's index values INFO 2020-11-12 15:26:28,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:26:29,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180826T190429/201808261904_201808271201_2S_scieng.nc INFO 2020-11-12 15:26:29,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808261904_201808271201.nc4 INFO 2020-11-12 15:26:29,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T120047/201808271200_201808271217.nc4 file... INFO 2020-11-12 15:26:29,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808271200_201808271217.nc4 INFO 2020-11-12 15:26:30,741Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T120047/201808271200_201808271217.nc4 INFO 2020-11-12 15:26:31,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:26:31,999Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:26:32,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:26:32,004Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:26:32,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:26:32,008Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:26:32,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:26:32,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:32,063Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:26:32,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:26:32,073Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:26:32,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:26:32,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:26:32,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:26:32,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:26:32,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:26:32,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:26:32,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:26:32,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:26:32,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:26:32,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:26:32,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:26:32,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:26:32,150Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:26:32,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:32,228Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:32,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:32,356Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:32,443Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:32,530Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:32,530Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T120047/201808271200_201808271217.nc4 INFO 2020-11-12 15:26:32,788Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:26:32,789Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:26:32,790Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.337 -0.0000010 0.0000035 24 0.15 -2.30 4.24 2018-08-27 12:03:02.759684086 INFO 2020-11-12 15:26:32,794Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 1775 13.17 - - INFO 2020-11-12 15:26:32,795Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 1799 INFO 2020-11-12 15:26:32,822Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180827T110058/20180827T131613/data.csv INFO 2020-11-12 15:26:32,853Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:26:32,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:26:33,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T120047/201808271200_201808271217_2S_scieng.nc INFO 2020-11-12 15:26:33,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808271200_201808271217.nc4 INFO 2020-11-12 15:26:33,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T121808/201808271218_201808271223.nc4 file... INFO 2020-11-12 15:26:33,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808271218_201808271223.nc4 INFO 2020-11-12 15:26:34,388Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T121808/201808271218_201808271223.nc4 INFO 2020-11-12 15:26:34,414Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,484Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,553Z lrauvNc4ToNetcdf.py createSeries():241 depth : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,624Z lrauvNc4ToNetcdf.py createSeries():241 time : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,694Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,762Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,829Z lrauvNc4ToNetcdf.py createSeries():241 depth : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,899Z lrauvNc4ToNetcdf.py createSeries():241 time : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:34,969Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,037Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,104Z lrauvNc4ToNetcdf.py createSeries():241 depth : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,173Z lrauvNc4ToNetcdf.py createSeries():241 time : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,243Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,311Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,379Z lrauvNc4ToNetcdf.py createSeries():241 depth : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,449Z lrauvNc4ToNetcdf.py createSeries():241 time : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:26:35,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:26:35,511Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:26:35,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:26:35,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:26:35,518Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:26:35,519Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:26:35,538Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:35,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:26:35,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:26:35,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:26:35,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:26:35,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:26:35,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:26:35,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:26:35,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:26:35,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:26:35,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:26:35,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:26:35,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:26:35,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:26:35,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:26:35,614Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:26:35,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:26:35,618Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,630Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:35,631Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,643Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:35,644Z lrauvNc4ToNetcdf.py createSeries():241 depth : 114 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:35,681Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 112 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,734Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:35,757Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 112 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,809Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:35,832Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 112 v_t values found before 2018-08-27 12:18:00 and after 2018-08-27 12:23:00 INFO 2020-11-12 15:26:35,884Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:35,885Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T121808/201808271218_201808271223.nc4 INFO 2020-11-12 15:26:36,103Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:26:36,104Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:26:36,106Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.334 0.0000077 0.0000073 15 0.09 -7.90 14.55 2018-08-27 12:19:39.074909925 INFO 2020-11-12 15:26:36,110Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.354 0.0000368 -0.0000215 175 1.26 1.72 -3.16 2018-08-27 12:20:55.087407112 INFO 2020-11-12 15:26:36,114Z lrauvNc4ToNetcdf.py nudge_coords():754 3: - - - 325 2.98 - - INFO 2020-11-12 15:26:36,114Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 515 INFO 2020-11-12 15:26:36,136Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180827T111819/20180827T132354/data.csv INFO 2020-11-12 15:26:36,172Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:26:36,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:26:36,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T121808/201808271218_201808271223_2S_scieng.nc INFO 2020-11-12 15:26:36,436Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808271218_201808271223.nc4 INFO 2020-11-12 15:26:37,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T122456/201808271225_201808271631.nc4 file... INFO 2020-11-12 15:26:37,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808271225_201808271631.nc4 INFO 2020-11-12 15:26:38,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T122456/201808271225_201808271631.nc4 INFO 2020-11-12 15:26:38,340Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:38,830Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:39,315Z lrauvNc4ToNetcdf.py createSeries():241 depth : 111 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:39,795Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:40,274Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:40,750Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:41,228Z lrauvNc4ToNetcdf.py createSeries():241 depth : 111 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:41,704Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:42,183Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:42,661Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:43,148Z lrauvNc4ToNetcdf.py createSeries():241 depth : 111 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:43,626Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:44,106Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:44,585Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:45,073Z lrauvNc4ToNetcdf.py createSeries():241 depth : 111 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:45,557Z lrauvNc4ToNetcdf.py createSeries():241 time : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:46,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:26:46,248Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:26:46,478Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:26:46,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:26:46,758Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:26:46,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:26:46,813Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:47,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:26:47,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:48,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:26:48,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:26:49,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:26:49,095Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:49,146Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:26:49,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:26:49,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:26:49,178Z lrauvNc4ToNetcdf.py createSeries():241 time_fix : 1 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:49,183Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:26:49,185Z lrauvNc4ToNetcdf.py createSeries():241 latitude_fix: 1 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:49,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:26:49,192Z lrauvNc4ToNetcdf.py createSeries():241 longitude_fix: 1 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:49,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:26:49,219Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:26:49,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:26:49,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:26:49,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:26:49,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:26:49,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:49,916Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:50,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:50,363Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:50,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:50,806Z lrauvNc4ToNetcdf.py createSeries():241 depth : 110 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:51,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:26:51,278Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 87 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:51,745Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:51,775Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 87 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:52,243Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:52,272Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 87 v_t values found before 2018-08-27 12:25:00 and after 2018-08-27 16:31:00 INFO 2020-11-12 15:26:52,738Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:26:52,739Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T122456/201808271225_201808271631.nc4 INFO 2020-11-12 15:26:53,793Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:26:53,794Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:26:53,796Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.270 0.0000833 0.0000120 356 2.73 -0.44 0.81 2018-08-27 12:29:10.595092058 INFO 2020-11-12 15:26:53,801Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.331 -0.0119073 0.0037232 21552 144.86 -2.58 4.76 2018-08-27 14:54:02.528179884 INFO 2020-11-12 15:26:53,807Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.206 0.0002255 0.0000618 752 5.93 -1.05 1.93 2018-08-27 14:59:58.486685991 INFO 2020-11-12 15:26:53,811Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.346 0.0000785 0.0000565 280 2.49 -2.27 4.20 2018-08-27 15:02:28.376163006 INFO 2020-11-12 15:26:53,816Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.276 -0.0013176 0.0006458 2699 18.21 -3.53 6.57 2018-08-27 15:20:41.325783014 INFO 2020-11-12 15:26:53,821Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.328 0.0000380 0.0000327 30 0.50 -6.50 12.09 2018-08-27 15:21:11.716461897 INFO 2020-11-12 15:26:53,825Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.355 -0.0009088 0.0007105 2544 16.99 -4.13 7.75 2018-08-27 15:38:11.796557903 INFO 2020-11-12 15:26:53,830Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.386 -0.0000293 0.0000122 265 2.31 -0.52 0.98 2018-08-27 15:40:30.817495108 INFO 2020-11-12 15:26:53,835Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.346 -0.0007877 0.0008202 2528 17.12 -4.69 8.88 2018-08-27 15:57:38.454478979 INFO 2020-11-12 15:26:53,839Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.285 0.0019355 0.0008375 866 6.54 -12.52 23.72 2018-08-27 16:04:11.383306980 INFO 2020-11-12 15:26:53,844Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.346 -0.0007293 -0.0001148 926 6.90 1.63 -3.08 2018-08-27 16:11:05.628851891 INFO 2020-11-12 15:26:53,848Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.324 0.0005037 0.0004842 846 6.16 -7.69 14.57 2018-08-27 16:17:15.617928982 INFO 2020-11-12 15:26:53,853Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.270 0.0017747 0.0007592 1007 7.29 -10.17 19.30 2018-08-27 16:24:33.258291006 INFO 2020-11-12 15:26:53,858Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.351 -0.0033685 0.0002502 981 7.07 -3.45 6.56 2018-08-27 16:31:37.657218933 INFO 2020-11-12 15:26:53,862Z lrauvNc4ToNetcdf.py nudge_coords():754 15: - - - 15 0.22 - - INFO 2020-11-12 15:26:53,862Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 35647 INFO 2020-11-12 15:26:53,888Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180827T112507/20180827T173151/data.csv INFO 2020-11-12 15:26:53,932Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:26:53,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:26:54,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180823_20180827/20180827T122456/201808271225_201808271631_2S_scieng.nc INFO 2020-11-12 15:26:54,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808271225_201808271631.nc4 INFO 2020-11-12 15:26:55,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180828T191553/201808281915_201808290221.nc4 file... INFO 2020-11-12 15:26:55,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808281915_201808290221.nc4 INFO 2020-11-12 15:26:57,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180828T191553/201808281915_201808290221.nc4 INFO 2020-11-12 15:26:57,206Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:26:57,984Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:26:58,760Z lrauvNc4ToNetcdf.py createSeries():241 depth : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:26:59,542Z lrauvNc4ToNetcdf.py createSeries():241 time : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:00,318Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:01,104Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:01,873Z lrauvNc4ToNetcdf.py createSeries():241 depth : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:02,643Z lrauvNc4ToNetcdf.py createSeries():241 time : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:03,409Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:04,191Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:04,970Z lrauvNc4ToNetcdf.py createSeries():241 depth : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:05,747Z lrauvNc4ToNetcdf.py createSeries():241 time : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:06,520Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:07,301Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:08,084Z lrauvNc4ToNetcdf.py createSeries():241 depth : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:08,871Z lrauvNc4ToNetcdf.py createSeries():241 time : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:09,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:27:09,647Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 17 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:09,915Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:27:09,918Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 16 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:10,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:10,208Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 16 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:10,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:10,495Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_salinity: 2 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:10,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:10,559Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_temperature: 2 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:10,626Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:10,631Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:11,375Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:27:11,380Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 31 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:11,939Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:11,944Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 31 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:12,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:27:12,503Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 31 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:13,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:27:13,063Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 31 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:13,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:27:13,618Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 3 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:13,681Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:13,683Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 3 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:13,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:13,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:27:13,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:27:13,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:27:13,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:27:13,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:27:13,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:27:14,183Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:27:14,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:27:14,201Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 25 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:14,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:27:14,547Z lrauvNc4ToNetcdf.py createSeries():241 platform_propeller_rotation_rate: 29 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:15,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:27:15,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:15,174Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:15,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:15,924Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:16,660Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:16,665Z lrauvNc4ToNetcdf.py createSeries():241 depth : 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:17,404Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:17,435Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:18,197Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:18,227Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:18,985Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:19,015Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 28 v_t values found before 2018-08-28 19:15:00 and after 2018-08-29 02:21:00 INFO 2020-11-12 15:27:19,775Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:19,776Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180828T191553/201808281915_201808290221.nc4 INFO 2020-11-12 15:27:21,438Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:27:21,440Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:27:21,441Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.346 0.0021723 -0.0000617 994 7.45 0.85 -1.53 2018-08-28 19:24:40.413467884 INFO 2020-11-12 15:27:21,446Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.347 0.0004634 0.0001499 929 6.50 -2.38 4.27 2018-08-28 19:31:11.040445089 INFO 2020-11-12 15:27:21,451Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.341 -0.0002528 -0.0000138 285 2.90 0.49 -0.88 2018-08-28 19:34:05.686542988 INFO 2020-11-12 15:27:21,455Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.303 0.0000650 0.0000267 21 0.34 -8.01 14.38 2018-08-28 19:34:26.747286081 INFO 2020-11-12 15:27:21,460Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.338 0.0001330 0.0004513 349 3.01 -15.50 27.82 2018-08-28 19:37:27.469795942 INFO 2020-11-12 15:27:21,464Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.348 -0.0019828 0.0014319 2440 16.32 -8.99 16.26 2018-08-28 19:53:47.051489115 INFO 2020-11-12 15:27:21,469Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.341 0.0002745 0.0002098 277 2.42 -8.87 16.04 2018-08-28 19:56:12.861834049 INFO 2020-11-12 15:27:21,474Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.333 -0.0007172 0.0012719 2466 16.44 -7.88 14.33 2018-08-28 20:12:40.001993894 INFO 2020-11-12 15:27:21,479Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.328 0.0001930 0.0000693 156 1.13 -6.23 11.34 2018-08-28 20:13:48.382981062 INFO 2020-11-12 15:27:21,483Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.357 0.0000007 0.0000425 90 0.64 -6.78 12.35 2018-08-28 20:14:27.098290920 INFO 2020-11-12 15:27:21,488Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.326 0.0002670 0.0002268 587 4.76 -4.84 8.82 2018-08-28 20:19:13.401000977 INFO 2020-11-12 15:27:21,492Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.085 0.0001532 0.0000943 352 2.96 -3.24 5.90 2018-08-28 20:22:11.650254011 INFO 2020-11-12 15:27:21,497Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.338 -0.0019727 0.0022018 4684 31.28 -7.09 13.04 2018-08-28 20:53:28.496736050 INFO 2020-11-12 15:27:21,502Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.360 0.0001088 0.0000017 183 1.70 -0.10 0.18 2018-08-28 20:55:10.703301907 INFO 2020-11-12 15:27:21,507Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.329 -0.0022062 0.0022565 4781 31.99 -7.10 13.07 2018-08-28 21:27:10.796078920 INFO 2020-11-12 15:27:21,511Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.317 -0.0000117 -0.0000263 32 0.44 6.01 -11.06 2018-08-28 21:27:37.685435057 INFO 2020-11-12 15:27:21,516Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.350 -0.0018289 0.0003713 4688 31.31 -1.19 2.20 2018-08-28 21:58:56.553453922 INFO 2020-11-12 15:27:21,521Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.341 0.0001633 0.0001092 1265 9.53 -1.15 2.12 2018-08-28 22:08:28.478692055 INFO 2020-11-12 15:27:21,526Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.351 0.0000820 0.0000457 385 3.01 -1.53 2.81 2018-08-28 22:11:29.597647905 INFO 2020-11-12 15:27:21,530Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.351 0.0000847 0.0000238 366 3.00 -0.80 1.47 2018-08-28 22:14:29.904546976 INFO 2020-11-12 15:27:21,535Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.330 -0.0017493 0.0018849 4709 31.49 -6.00 11.09 2018-08-28 22:45:59.782175064 INFO 2020-11-12 15:27:21,540Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.337 0.0007642 -0.0007018 374 3.00 23.42 -43.28 2018-08-28 22:49:00.432493925 INFO 2020-11-12 15:27:21,545Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.376 -0.0024918 0.0012316 4768 31.84 -3.86 7.17 2018-08-28 23:20:51.231487036 INFO 2020-11-12 15:27:21,550Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.345 0.0002017 0.0000085 288 2.57 -0.33 0.61 2018-08-28 23:23:25.994874954 INFO 2020-11-12 15:27:21,554Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.342 -0.0026249 0.0007646 4869 32.67 -2.33 4.34 2018-08-28 23:56:06.488779068 INFO 2020-11-12 15:27:21,559Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.334 -0.0000043 0.0000788 207 1.82 -4.31 8.02 2018-08-28 23:57:56.146847010 INFO 2020-11-12 15:27:21,564Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.352 -0.0014674 0.0009595 4808 32.05 -2.97 5.55 2018-08-29 00:29:59.771635056 INFO 2020-11-12 15:27:21,569Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.353 -0.0000448 0.0000045 257 2.22 -0.20 0.38 2018-08-29 00:32:13.534466982 INFO 2020-11-12 15:27:21,574Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.337 -0.0023429 0.0011489 4604 31.26 -3.64 6.81 2018-08-29 01:03:29.580962896 INFO 2020-11-12 15:27:21,579Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.346 0.0002805 0.0002315 423 3.37 -6.79 12.71 2018-08-29 01:06:52.450684071 INFO 2020-11-12 15:27:21,583Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.316 -0.0015158 0.0010454 4883 32.86 -3.14 5.89 2018-08-29 01:39:44.459692955 INFO 2020-11-12 15:27:21,588Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.319 0.0000207 0.0000183 35 0.46 -3.90 7.31 2018-08-29 01:40:12.735570908 INFO 2020-11-12 15:27:21,593Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.349 -0.0041740 0.0010406 5006 34.59 -2.97 5.58 2018-08-29 02:14:48.290473938 INFO 2020-11-12 15:27:21,598Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.349 -0.0001113 0.0002680 158 1.74 -15.20 28.58 2018-08-29 02:16:32.938168049 INFO 2020-11-12 15:27:21,603Z lrauvNc4ToNetcdf.py nudge_coords():754 35: - - - 632 4.73 - - INFO 2020-11-12 15:27:21,603Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 61351 INFO 2020-11-12 15:27:21,628Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180828T181553/20180829T032116/data.csv INFO 2020-11-12 15:27:21,685Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:27:21,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:27:22,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180828T191553/201808281915_201808290221_2S_scieng.nc INFO 2020-11-12 15:27:22,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808281915_201808290221.nc4 INFO 2020-11-12 15:27:22,439Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318.nc4 file... INFO 2020-11-12 15:27:22,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808290221_201808290318.nc4 INFO 2020-11-12 15:27:23,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318.nc4 INFO 2020-11-12 15:27:23,560Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:24,493Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:25,430Z lrauvNc4ToNetcdf.py createSeries():241 depth : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:25,597Z lrauvNc4ToNetcdf.py createSeries():241 time : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:25,767Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:26,831Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:27,896Z lrauvNc4ToNetcdf.py createSeries():241 depth : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:28,076Z lrauvNc4ToNetcdf.py createSeries():241 time : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:28,252Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:29,340Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:30,394Z lrauvNc4ToNetcdf.py createSeries():241 depth : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:30,566Z lrauvNc4ToNetcdf.py createSeries():241 time : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:30,734Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:31,678Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:32,622Z lrauvNc4ToNetcdf.py createSeries():241 depth : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:32,777Z lrauvNc4ToNetcdf.py createSeries():241 time : 80 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:32,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:27:32,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:27:33,009Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:33,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:33,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:33,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:33,087Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 82 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:33,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:27:33,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:33,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:27:33,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:27:33,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:27:33,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:33,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:33,599Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:27:33,612Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:27:33,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:27:33,623Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:27:33,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:27:33,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:27:33,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:27:33,676Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:27:33,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:27:33,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:27:33,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:33,812Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:33,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:33,931Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:34,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:34,049Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:34,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:34,193Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 74 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:34,333Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:34,359Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 74 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:34,503Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:34,529Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 74 v_t values found before 2018-08-29 02:21:00 and after 2018-08-29 03:18:00 INFO 2020-11-12 15:27:34,670Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:34,670Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318.nc4 INFO 2020-11-12 15:27:34,695Z lrauvNc4ToNetcdf.py var_series():601 Removing bad longitude times from /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318.nc4 ([index], [values]): [7434], ['2445-02-03 19:34:54.827705'] INFO 2020-11-12 15:27:34,837Z lrauvNc4ToNetcdf.py var_series():601 Removing bad latitude times from /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318.nc4 ([index], [values]): [7434], ['2445-02-03 19:34:54.827705'] INFO 2020-11-12 15:27:35,062Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:27:35,063Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:27:35,064Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.350 -0.0000045 0.0000577 134 0.98 -5.82 10.93 2018-08-29 02:25:19.245356083 INFO 2020-11-12 15:27:35,069Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.341 -0.0000855 0.0002325 724 5.80 -3.95 7.43 2018-08-29 02:31:07.766761065 INFO 2020-11-12 15:27:35,073Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.332 0.0000172 0.0002132 239 2.35 -8.93 16.80 2018-08-29 02:33:29.271962881 INFO 2020-11-12 15:27:35,078Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.342 -0.0013147 0.0020577 4626 31.29 -6.46 12.19 2018-08-29 03:04:47.078840017 INFO 2020-11-12 15:27:35,083Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.346 -0.0014888 -0.0017335 290 2.17 78.60 -147.91 2018-08-29 03:06:57.778543949 INFO 2020-11-12 15:27:35,087Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.328 0.0000042 -0.0000503 1322 9.88 0.50 -0.94 2018-08-29 03:16:51.103164911 INFO 2020-11-12 15:27:35,091Z lrauvNc4ToNetcdf.py nudge_coords():754 7: - - - 201 1.84 - - INFO 2020-11-12 15:27:35,091Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 7536 INFO 2020-11-12 15:27:35,116Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T012129/20180829T041841/data.csv INFO 2020-11-12 15:27:35,145Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:27:35,148Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:27:35,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T022119/201808290221_201808290318_2S_scieng.nc INFO 2020-11-12 15:27:35,641Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808290221_201808290318.nc4 INFO 2020-11-12 15:27:35,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T031858/201808290319_201808290321.nc4 file... INFO 2020-11-12 15:27:35,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808290319_201808290321.nc4 INFO 2020-11-12 15:27:36,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T031858/201808290319_201808290321.nc4 INFO 2020-11-12 15:27:36,841Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:36,902Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:36,963Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,025Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,092Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,152Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,211Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,272Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,333Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,392Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,452Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,513Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,574Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,633Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,693Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,754Z lrauvNc4ToNetcdf.py createSeries():241 time : 22 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:27:37,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:27:37,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:27:37,809Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:27:37,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:27:37,813Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:27:37,815Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:27:37,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:37,832Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:27:37,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:27:37,842Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:27:37,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:27:37,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:27:37,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:27:37,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:27:37,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:27:37,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:27:37,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:27:37,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:27:37,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:27:37,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:27:37,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:27:37,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:27:37,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:27:37,906Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:37,913Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:37,919Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,925Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:37,948Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 17 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:37,994Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:38,016Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 17 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:38,061Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:38,082Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 17 v_t values found before 2018-08-29 03:19:00 and after 2018-08-29 03:21:00 INFO 2020-11-12 15:27:38,127Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:38,128Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T031858/201808290319_201808290321.nc4 INFO 2020-11-12 15:27:38,325Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:27:38,326Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:27:38,327Z lrauvNc4ToNetcdf.py nudge_coords():754 1: - - - 35 0.85 - - INFO 2020-11-12 15:27:38,327Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 35 INFO 2020-11-12 15:27:38,348Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T021908/20180829T042119/data.csv INFO 2020-11-12 15:27:38,379Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:27:38,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:27:38,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T031858/201808290319_201808290321_2S_scieng.nc INFO 2020-11-12 15:27:38,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808290319_201808290321.nc4 INFO 2020-11-12 15:27:39,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T032123/201808290321_201808290407.nc4 file... INFO 2020-11-12 15:27:39,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808290321_201808290407.nc4 INFO 2020-11-12 15:27:40,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T032123/201808290321_201808290407.nc4 INFO 2020-11-12 15:27:40,073Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,205Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,335Z lrauvNc4ToNetcdf.py createSeries():241 depth : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,474Z lrauvNc4ToNetcdf.py createSeries():241 time : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,611Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,740Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:40,870Z lrauvNc4ToNetcdf.py createSeries():241 depth : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,006Z lrauvNc4ToNetcdf.py createSeries():241 time : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,142Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,275Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,413Z lrauvNc4ToNetcdf.py createSeries():241 depth : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,550Z lrauvNc4ToNetcdf.py createSeries():241 time : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,687Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,816Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:41,952Z lrauvNc4ToNetcdf.py createSeries():241 depth : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,090Z lrauvNc4ToNetcdf.py createSeries():241 time : 49 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:27:42,215Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 19 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:27:42,246Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 19 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:42,278Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 19 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:42,310Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_salinity: 4 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:42,321Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_temperature: 4 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:42,333Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,418Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:27:42,420Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 39 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:42,478Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 39 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:27:42,536Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 39 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:27:42,596Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 39 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,652Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:27:42,654Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,664Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:42,665Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 4 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:42,689Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:27:42,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:27:42,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:27:42,712Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:27:42,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:27:42,719Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:27:42,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:27:42,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:27:42,772Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 44 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,792Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:27:42,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:27:42,884Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:27:42,885Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:42,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:42,965Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:43,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:43,045Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:43,123Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:27:43,148Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:43,281Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:43,310Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:43,439Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:43,465Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 48 v_t values found before 2018-08-29 03:21:00 and after 2018-08-29 04:07:00 INFO 2020-11-12 15:27:43,600Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:27:43,600Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T032123/201808290321_201808290407.nc4 INFO 2020-11-12 15:27:43,970Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:27:43,971Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:27:43,972Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.314 0.0000175 -0.0000380 1117 8.64 0.43 -0.81 2018-08-29 03:34:32.546567917 INFO 2020-11-12 15:27:43,977Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.346 0.0000728 0.0000317 204 1.91 -1.63 3.08 2018-08-29 03:36:27.450643063 INFO 2020-11-12 15:27:43,981Z lrauvNc4ToNetcdf.py nudge_coords():754 3: - - - 4621 30.85 - - INFO 2020-11-12 15:27:43,981Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 5942 INFO 2020-11-12 15:27:44,008Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T022134/20180829T050719/data.csv INFO 2020-11-12 15:27:44,039Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:27:44,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:27:44,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T032123/201808290321_201808290407_2S_scieng.nc INFO 2020-11-12 15:27:44,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808290321_201808290407.nc4 INFO 2020-11-12 15:27:45,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T040719/201808290407_201808290843.nc4 file... INFO 2020-11-12 15:27:45,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808290407_201808290843.nc4 INFO 2020-11-12 15:27:46,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T040719/201808290407_201808290843.nc4 INFO 2020-11-12 15:27:46,796Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:47,357Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:47,914Z lrauvNc4ToNetcdf.py createSeries():241 depth : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:48,460Z lrauvNc4ToNetcdf.py createSeries():241 time : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:49,010Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:49,561Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:50,107Z lrauvNc4ToNetcdf.py createSeries():241 depth : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:50,652Z lrauvNc4ToNetcdf.py createSeries():241 time : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:51,224Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:51,757Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:52,287Z lrauvNc4ToNetcdf.py createSeries():241 depth : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:52,818Z lrauvNc4ToNetcdf.py createSeries():241 time : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:53,359Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:53,890Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:54,418Z lrauvNc4ToNetcdf.py createSeries():241 depth : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:54,961Z lrauvNc4ToNetcdf.py createSeries():241 time : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:55,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:27:55,805Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:27:56,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:56,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:56,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:27:56,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:27:56,535Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:27:57,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:27:57,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:58,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:27:58,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:27:59,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:27:59,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:59,523Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:27:59,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:27:59,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:27:59,560Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:27:59,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:27:59,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:27:59,597Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:27:59,687Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:27:59,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:27:59,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:28:00,354Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:28:00,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:00,364Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:00,870Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:00,874Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:01,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:01,390Z lrauvNc4ToNetcdf.py createSeries():241 depth : 66 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:01,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:01,929Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 64 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:02,458Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:02,488Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 64 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:03,021Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:03,051Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 64 v_t values found before 2018-08-29 04:07:00 and after 2018-08-29 08:43:00 INFO 2020-11-12 15:28:03,573Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:03,574Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T040719/201808290407_201808290843.nc4 INFO 2020-11-12 15:28:04,737Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:28:04,738Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:28:04,740Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.340 0.0004817 0.0002023 1040 8.52 -2.34 4.40 2018-08-29 04:16:00.527916908 INFO 2020-11-12 15:28:04,745Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.357 -0.0005632 0.0008750 4774 32.02 -2.69 5.06 2018-08-29 04:48:02.357615948 INFO 2020-11-12 15:28:04,750Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.345 -0.0000450 -0.0000537 32 0.45 11.72 -22.05 2018-08-29 04:48:29.850878 INFO 2020-11-12 15:28:04,754Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.334 -0.0156537 0.0059814 28094 187.39 -3.14 5.91 2018-08-29 07:55:53.715909958 INFO 2020-11-12 15:28:04,761Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.319 0.0016210 0.0003923 4983 37.12 -1.04 1.96 2018-08-29 08:33:01.212013960 INFO 2020-11-12 15:28:04,766Z lrauvNc4ToNetcdf.py nudge_coords():754 6: - - - 1412 10.55 - - INFO 2020-11-12 15:28:04,766Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 40335 INFO 2020-11-12 15:28:04,792Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T030719/20180829T094333/data.csv INFO 2020-11-12 15:28:04,824Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:28:04,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:28:05,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T040719/201808290407_201808290843_2S_scieng.nc INFO 2020-11-12 15:28:05,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808290407_201808290843.nc4 INFO 2020-11-12 15:28:06,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T084336/201808290843_201808291429.nc4 file... INFO 2020-11-12 15:28:06,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808290843_201808291429.nc4 INFO 2020-11-12 15:28:07,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T084336/201808290843_201808291429.nc4 INFO 2020-11-12 15:28:22,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:28:23,237Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:28:23,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:28:23,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:28:23,984Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:28:24,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:28:24,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:28:25,647Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:28:26,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:28:26,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:28:27,628Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:28:27,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:28:27,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:28:27,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:28:27,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:28:27,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:28:27,823Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:28:27,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:28:27,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:28:28,136Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:28:28,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:28:28,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:28:29,363Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:28:29,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:30,280Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:31,202Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:32,135Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:33,152Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:34,119Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:35,066Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:35,066Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T084336/201808290843_201808291429.nc4 INFO 2020-11-12 15:28:36,452Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:28:36,454Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:28:36,455Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.353 0.0008862 0.0000462 2429 18.57 -0.24 0.46 2018-08-29 09:06:17.990385056 INFO 2020-11-12 15:28:36,460Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.167 -0.0001000 0.0001538 538 4.61 -3.28 6.19 2018-08-29 09:10:54.826786041 INFO 2020-11-12 15:28:36,465Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.256 -0.0003328 -0.0005010 967 8.89 5.54 -10.44 2018-08-29 09:19:48.469810963 INFO 2020-11-12 15:28:36,470Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.333 0.0001485 0.0053890 5334 35.71 -14.90 27.96 2018-08-29 09:55:31.511107922 INFO 2020-11-12 15:28:36,475Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.289 -0.0001625 0.0000558 603 4.51 -1.22 2.30 2018-08-29 10:00:02.222553968 INFO 2020-11-12 15:28:36,480Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.266 -0.0014721 0.0051089 4766 31.99 -15.84 29.59 2018-08-29 10:32:02.057430983 INFO 2020-11-12 15:28:36,485Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.326 -0.0006860 -0.0000052 344 3.17 0.16 -0.30 2018-08-29 10:35:12.505197048 INFO 2020-11-12 15:28:36,489Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.244 -0.0029648 0.0046665 4824 32.53 -14.34 26.59 2018-08-29 11:07:44.380350113 INFO 2020-11-12 15:28:36,494Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.253 -0.0000575 0.0000373 33 0.53 -7.04 13.06 2018-08-29 11:08:16.443830013 INFO 2020-11-12 15:28:36,499Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.356 -0.0038706 0.0072019 5362 36.08 -20.04 36.99 2018-08-29 11:44:21.629566908 INFO 2020-11-12 15:28:36,504Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.341 -0.0031040 -0.0017307 668 4.98 34.96 -64.35 2018-08-29 11:49:21.038732052 INFO 2020-11-12 15:28:36,508Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.341 -0.0010534 0.0036390 4939 33.24 -11.16 20.28 2018-08-29 12:22:36.030746937 INFO 2020-11-12 15:28:36,513Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.333 0.0000342 0.0003770 709 5.46 -7.04 12.80 2018-08-29 12:28:03.878285885 INFO 2020-11-12 15:28:36,518Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.302 -0.0053895 0.0035640 5307 35.68 -10.31 18.51 2018-08-29 13:03:45.193811893 INFO 2020-11-12 15:28:36,523Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.358 0.0000123 0.0000035 31 0.54 -0.68 1.21 2018-08-29 13:04:17.654771090 INFO 2020-11-12 15:28:36,528Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.364 -0.0048609 0.0018095 5339 35.72 -5.28 9.39 2018-08-29 13:40:01.569789886 INFO 2020-11-12 15:28:36,533Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.278 0.0002962 0.0002110 329 2.70 -8.16 14.50 2018-08-29 13:42:43.735178947 INFO 2020-11-12 15:28:36,537Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.350 -0.0027426 0.0005619 4277 28.99 -2.02 3.59 2018-08-29 14:11:43.202402115 INFO 2020-11-12 15:28:36,542Z lrauvNc4ToNetcdf.py nudge_coords():754 19: - - - 2368 17.17 - - INFO 2020-11-12 15:28:36,542Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 49167 INFO 2020-11-12 15:28:36,568Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T074347/20180829T152853/data.csv INFO 2020-11-12 15:28:36,614Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:28:36,618Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:28:37,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T084336/201808290843_201808291429_2S_scieng.nc INFO 2020-11-12 15:28:37,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808290843_201808291429.nc4 INFO 2020-11-12 15:28:37,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T142901/201808291429_201808291436.nc4 file... INFO 2020-11-12 15:28:37,576Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808291429_201808291436.nc4 INFO 2020-11-12 15:28:38,581Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T142901/201808291429_201808291436.nc4 INFO 2020-11-12 15:28:38,608Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:38,676Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:38,751Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:38,836Z lrauvNc4ToNetcdf.py createSeries():241 time : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:38,910Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:38,985Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,068Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,143Z lrauvNc4ToNetcdf.py createSeries():241 time : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,221Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,298Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,371Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,459Z lrauvNc4ToNetcdf.py createSeries():241 time : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,537Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,615Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,693Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,789Z lrauvNc4ToNetcdf.py createSeries():241 time : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,858Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:28:39,869Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:28:39,872Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:28:39,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:28:39,877Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:28:39,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:28:39,881Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:39,899Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:28:39,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:28:39,911Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:28:39,917Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:28:39,922Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:28:39,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:28:39,927Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:28:39,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:28:39,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:28:39,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:28:39,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:28:39,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:28:39,963Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:28:39,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:28:39,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:28:39,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:28:39,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:28:39,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:28:39,992Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:40,008Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:40,025Z lrauvNc4ToNetcdf.py createSeries():241 depth : 48 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:28:40,068Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 46 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,142Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:40,175Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 46 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,246Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:40,280Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 46 v_t values found before 2018-08-29 14:29:00 and after 2018-08-29 14:36:00 INFO 2020-11-12 15:28:40,354Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:28:40,355Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T142901/201808291429_201808291436.nc4 INFO 2020-11-12 15:28:40,675Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:28:40,676Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:28:40,677Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.327 0.0002812 0.0000615 165 1.26 -5.08 9.02 2018-08-29 14:32:21.185069084 INFO 2020-11-12 15:28:40,682Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 535 4.06 - - INFO 2020-11-12 15:28:40,682Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 700 INFO 2020-11-12 15:28:40,707Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T132913/20180829T153625/data.csv INFO 2020-11-12 15:28:40,747Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:28:40,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:28:41,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T142901/201808291429_201808291436_2S_scieng.nc INFO 2020-11-12 15:28:41,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808291429_201808291436.nc4 INFO 2020-11-12 15:28:43,032Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T143724/201808291437_201808300008.nc4 file... INFO 2020-11-12 15:28:43,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808291437_201808300008.nc4 INFO 2020-11-12 15:28:44,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T143724/201808291437_201808300008.nc4 INFO 2020-11-12 15:28:44,526Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:45,739Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:46,858Z lrauvNc4ToNetcdf.py createSeries():241 depth : 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:47,930Z lrauvNc4ToNetcdf.py createSeries():241 time : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:48,998Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:50,053Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:51,136Z lrauvNc4ToNetcdf.py createSeries():241 depth : 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:52,228Z lrauvNc4ToNetcdf.py createSeries():241 time : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:53,296Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:54,351Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:55,410Z lrauvNc4ToNetcdf.py createSeries():241 depth : 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:56,519Z lrauvNc4ToNetcdf.py createSeries():241 time : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:57,589Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:58,655Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:28:59,725Z lrauvNc4ToNetcdf.py createSeries():241 depth : 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:00,790Z lrauvNc4ToNetcdf.py createSeries():241 time : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:01,859Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:29:02,462Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:29:03,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:29:03,671Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:29:03,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:29:03,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:29:03,933Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:04,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:29:06,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:29:07,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:29:08,344Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:29:09,479Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:29:09,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:29:09,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:29:09,750Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:29:09,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:29:09,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:29:09,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:29:09,787Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:29:09,918Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:29:10,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:29:10,288Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:29:10,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:29:12,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:29:12,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:29:12,020Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:13,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:29:13,166Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:14,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:29:14,292Z lrauvNc4ToNetcdf.py createSeries():241 depth : 9 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:15,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:29:15,429Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:16,471Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:29:16,525Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:17,564Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:29:17,613Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 10 v_t values found before 2018-08-29 14:37:00 and after 2018-08-30 00:08:00 INFO 2020-11-12 15:29:18,643Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:29:18,644Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T143724/201808291437_201808300008.nc4 INFO 2020-11-12 15:29:20,870Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:29:20,872Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:29:20,874Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.294 0.0000792 -0.0000283 236 1.70 1.74 -3.10 2018-08-29 14:41:06.453140974 INFO 2020-11-12 15:29:20,879Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.297 -0.0196724 0.0028814 23972 161.22 -1.87 3.31 2018-08-29 17:22:20.308214903 INFO 2020-11-12 15:29:20,886Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.324 -0.0003590 0.0000103 579 4.92 -0.22 0.39 2018-08-29 17:27:15.890460968 INFO 2020-11-12 15:29:20,891Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.341 0.0000757 -0.0000715 34 0.27 27.72 -49.18 2018-08-29 17:27:32.449340105 INFO 2020-11-12 15:29:20,896Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.301 -0.0001598 0.0001583 895 6.72 -2.46 4.36 2018-08-29 17:34:16.177417994 INFO 2020-11-12 15:29:20,901Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.325 -0.0000610 0.0000170 190 2.14 -0.83 1.47 2018-08-29 17:36:24.869870901 INFO 2020-11-12 15:29:20,905Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.318 -0.0000080 0.0000590 179 1.86 -3.31 5.88 2018-08-29 17:38:16.835699081 INFO 2020-11-12 15:29:20,910Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.341 -0.0000067 -0.0000055 43 0.33 1.74 -3.08 2018-08-29 17:38:37.088387012 INFO 2020-11-12 15:29:20,915Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.345 -0.0001253 0.0000558 841 6.28 -0.93 1.65 2018-08-29 17:44:54.049439907 INFO 2020-11-12 15:29:20,920Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.348 -0.0000691 0.0000058 738 5.82 -0.10 0.19 2018-08-29 17:50:43.658381939 INFO 2020-11-12 15:29:20,924Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.264 0.0000853 0.0000378 275 2.60 -1.52 2.70 2018-08-29 17:53:20.062206030 INFO 2020-11-12 15:29:20,929Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.298 -0.0005754 0.0042534 5268 35.74 -12.48 22.05 2018-08-29 18:29:04.743654966 INFO 2020-11-12 15:29:20,935Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.303 0.0000227 -0.0000095 30 0.58 1.73 -3.05 2018-08-29 18:29:39.662240028 INFO 2020-11-12 15:29:20,939Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.307 -0.0005719 0.0052854 5282 35.68 -15.59 27.45 2018-08-29 19:05:20.539659977 INFO 2020-11-12 15:29:20,945Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.311 -0.0004333 -0.0000810 799 6.07 1.40 -2.47 2018-08-29 19:11:25.348452091 INFO 2020-11-12 15:29:20,950Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.219 -0.0006697 0.0048374 4782 32.19 -15.91 27.84 2018-08-29 19:43:37.326589108 INFO 2020-11-12 15:29:20,955Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.320 -0.0000068 0.0000800 261 2.34 -3.62 6.33 2018-08-29 19:45:58.130484103 INFO 2020-11-12 15:29:20,960Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.350 -0.0024148 0.0044623 5094 34.47 -13.80 23.99 2018-08-29 20:20:26.736040115 INFO 2020-11-12 15:29:20,965Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.318 0.0000222 -0.0000303 32 0.45 7.22 -12.54 2018-08-29 20:20:54.061266899 INFO 2020-11-12 15:29:20,969Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.354 -0.0037922 0.0048757 4781 31.98 -16.39 28.25 2018-08-29 20:52:53.077426910 INFO 2020-11-12 15:29:20,974Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.343 0.0000242 -0.0001962 173 1.36 15.47 -26.66 2018-08-29 20:54:15.291213036 INFO 2020-11-12 15:29:20,979Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.350 -0.0000123 0.0000202 62 0.46 -4.73 8.16 2018-08-29 20:54:43.325256109 INFO 2020-11-12 15:29:20,984Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.329 -0.0000725 0.0000550 421 3.86 -1.53 2.64 2018-08-29 20:58:35.492961884 INFO 2020-11-12 15:29:20,989Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.338 -0.0037882 0.0008498 4413 29.55 -3.09 5.33 2018-08-29 21:28:08.936399937 INFO 2020-11-12 15:29:20,994Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.340 -0.0007850 0.0004434 1003 7.59 -6.28 10.83 2018-08-29 21:35:44.581624031 INFO 2020-11-12 15:29:20,999Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.332 -0.0000502 -0.0000297 269 2.38 1.34 -2.31 2018-08-29 21:38:07.814554930 INFO 2020-11-12 15:29:21,003Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.353 -0.0067662 0.0024150 4794 32.01 -8.23 13.98 2018-08-29 22:10:09.006062031 INFO 2020-11-12 15:29:21,008Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.337 -0.0001250 -0.0000248 176 1.49 1.82 -3.08 2018-08-29 22:11:38.925478935 INFO 2020-11-12 15:29:21,017Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.336 -0.0000742 0.0000380 329 2.95 -1.41 2.39 2018-08-29 22:14:36.257678032 INFO 2020-11-12 15:29:21,022Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.349 -0.0011637 -0.0003725 3815 25.81 1.57 -2.67 2018-08-29 22:40:25.461447001 INFO 2020-11-12 15:29:21,027Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.327 -0.0000578 -0.0000958 38 0.53 19.79 -33.61 2018-08-29 22:40:57.590188026 INFO 2020-11-12 15:29:21,032Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.355 -0.0000097 0.0000073 41 0.27 -3.01 5.11 2018-08-29 22:41:13.938982964 INFO 2020-11-12 15:29:21,037Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.346 0.0001686 0.0004092 801 5.96 -7.48 12.71 2018-08-29 22:47:12.200217009 INFO 2020-11-12 15:29:21,041Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.327 -0.0003285 0.0004250 380 3.20 -14.46 24.58 2018-08-29 22:50:24.819827080 INFO 2020-11-12 15:29:21,046Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.349 -0.0064055 0.0036175 4680 32.44 -12.26 20.67 2018-08-29 23:22:51.342406988 INFO 2020-11-12 15:29:21,051Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.351 -0.0001768 -0.0012582 36 0.60 229.12 -385.62 2018-08-29 23:23:28.059118032 INFO 2020-11-12 15:29:21,056Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.355 -0.0026882 0.0003981 4700 31.47 -1.39 2.34 2018-08-29 23:54:56.415158033 INFO 2020-11-12 15:29:21,061Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.327 0.0000182 0.0000317 297 2.28 -1.53 2.58 2018-08-29 23:57:13.510659933 INFO 2020-11-12 15:29:21,066Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.346 -0.0017007 0.0007070 969 7.29 -10.68 17.97 2018-08-30 00:04:31.254271030 INFO 2020-11-12 15:29:21,071Z lrauvNc4ToNetcdf.py nudge_coords():754 40: - - - 476 3.60 - - INFO 2020-11-12 15:29:21,071Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 82184 INFO 2020-11-12 15:29:21,103Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T133736/20180830T010808/data.csv INFO 2020-11-12 15:29:21,153Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:29:21,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:29:22,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180829T143724/201808291437_201808300008_2S_scieng.nc INFO 2020-11-12 15:29:22,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808291437_201808300008.nc4 INFO 2020-11-12 15:29:24,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T000808/201808300008_201808301654.nc4 file... INFO 2020-11-12 15:29:24,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808300008_201808301654.nc4 INFO 2020-11-12 15:29:26,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T000808/201808300008_201808301654.nc4 INFO 2020-11-12 15:29:26,288Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:28,182Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:30,089Z lrauvNc4ToNetcdf.py createSeries():241 depth : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:32,021Z lrauvNc4ToNetcdf.py createSeries():241 time : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:33,872Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:35,676Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:37,613Z lrauvNc4ToNetcdf.py createSeries():241 depth : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:39,535Z lrauvNc4ToNetcdf.py createSeries():241 time : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:41,343Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:43,184Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:44,988Z lrauvNc4ToNetcdf.py createSeries():241 depth : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:46,784Z lrauvNc4ToNetcdf.py createSeries():241 time : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:48,610Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:50,456Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:52,318Z lrauvNc4ToNetcdf.py createSeries():241 depth : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:54,133Z lrauvNc4ToNetcdf.py createSeries():241 time : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:29:55,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:29:56,992Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:29:58,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:29:59,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:29:59,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:29:59,666Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:29:59,682Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:01,510Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:30:03,659Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:05,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:30:07,981Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:30:10,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:30:10,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:10,502Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:10,511Z lrauvNc4ToNetcdf.py createSeries():241 platform_battery_charge: 1 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:10,529Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:30:10,534Z lrauvNc4ToNetcdf.py createSeries():241 platform_battery_voltage: 1 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:10,551Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:30:10,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:30:10,566Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:30:10,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:30:10,650Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:30:11,356Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:30:11,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:30:12,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:30:14,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:30:14,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:14,403Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:16,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:16,201Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:17,959Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:17,975Z lrauvNc4ToNetcdf.py createSeries():241 depth : 120 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:19,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:19,802Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 101 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:21,570Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:21,614Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 101 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:23,375Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:23,419Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 101 v_t values found before 2018-08-30 00:08:00 and after 2018-08-30 16:54:00 INFO 2020-11-12 15:30:25,182Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:25,185Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T000808/201808300008_201808301654.nc4 INFO 2020-11-12 15:30:28,851Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:30:28,853Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:30:28,855Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.342 -0.0189043 0.0033889 20827 139.76 -2.67 4.49 2018-08-30 02:31:44.880460024 INFO 2020-11-12 15:30:28,863Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.285 -0.0000995 0.0000005 486 4.43 -0.01 0.02 2018-08-30 02:36:11.040793896 INFO 2020-11-12 15:30:28,868Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.358 -0.0000015 0.0000210 35 0.27 -8.68 14.61 2018-08-30 02:36:27.366046906 INFO 2020-11-12 15:30:28,873Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.329 -0.0007792 -0.0001978 2982 21.29 1.02 -1.72 2018-08-30 02:57:45.337917089 INFO 2020-11-12 15:30:28,878Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.352 -0.0003882 0.0006500 561 4.47 -16.02 26.97 2018-08-30 03:02:13.698120117 INFO 2020-11-12 15:30:28,884Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.344 -0.0007409 -0.0027723 4732 31.59 9.57 -16.26 2018-08-30 03:33:49.599291086 INFO 2020-11-12 15:30:28,889Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.342 0.0000018 -0.0000550 330 2.97 2.02 -3.44 2018-08-30 03:36:47.965595961 INFO 2020-11-12 15:30:28,894Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.351 0.0000075 -0.0000080 44 0.65 1.35 -2.29 2018-08-30 03:37:27.150943995 INFO 2020-11-12 15:30:28,899Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.339 -0.0018811 -0.0023829 4738 31.69 8.11 -13.93 2018-08-30 04:09:08.894845009 INFO 2020-11-12 15:30:28,905Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.311 0.0000443 -0.0000328 27 0.46 7.71 -13.24 2018-08-30 04:09:36.863140106 INFO 2020-11-12 15:30:28,910Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.348 -0.0026294 -0.0021399 4625 30.84 7.40 -12.86 2018-08-30 04:40:27.567254066 INFO 2020-11-12 15:30:28,915Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.349 -0.0000968 -0.0000207 496 4.45 0.50 -0.86 2018-08-30 04:44:54.921574116 INFO 2020-11-12 15:30:28,920Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.347 -0.0029444 -0.0019007 4620 30.96 6.46 -11.38 2018-08-30 05:15:52.693681955 INFO 2020-11-12 15:30:28,925Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.326 0.0001165 -0.0000482 441 3.58 1.42 -2.49 2018-08-30 05:19:27.775923967 INFO 2020-11-12 15:30:28,930Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.331 -0.0056057 0.0000561 4659 31.45 -0.19 0.33 2018-08-30 05:50:54.922620058 INFO 2020-11-12 15:30:28,936Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 3.406 0.0000268 0.0000823 297 2.71 -3.16 5.64 2018-08-30 05:53:37.752943039 INFO 2020-11-12 15:30:28,941Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.335 -0.0049260 0.0007345 4763 31.88 -2.37 4.27 2018-08-30 06:25:34.186605930 INFO 2020-11-12 15:30:28,946Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.365 -0.0010453 0.0001007 463 3.54 -2.93 5.28 2018-08-30 06:29:06.689604998 INFO 2020-11-12 15:30:28,951Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.357 -0.0029309 0.0001890 4649 31.04 -0.62 1.13 2018-08-30 07:00:09.277198076 INFO 2020-11-12 15:30:28,957Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.297 -0.0000057 0.0000105 51 0.72 -1.50 2.72 2018-08-30 07:00:52.618469 INFO 2020-11-12 15:30:28,962Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.345 -0.0278545 0.0020546 27180 181.37 -1.15 2.10 2018-08-30 10:02:15.205316067 INFO 2020-11-12 15:30:28,970Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.344 -0.0002332 0.0000072 304 2.76 -0.26 0.48 2018-08-30 10:05:01.369728088 INFO 2020-11-12 15:30:28,975Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.343 -0.0000070 -0.0000070 45 0.29 2.42 -4.43 2018-08-30 10:05:19.359211922 INFO 2020-11-12 15:30:28,980Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.332 -0.0019378 0.0006511 174 1.68 -39.04 71.61 2018-08-30 10:07:00.845709085 INFO 2020-11-12 15:30:28,986Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.297 0.0018422 -0.0007313 30 0.46 161.70 -296.28 2018-08-30 10:07:28.678107023 INFO 2020-11-12 15:30:28,991Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.356 -0.0034778 -0.0005791 4696 31.31 1.87 -3.43 2018-08-30 10:38:47.648329973 INFO 2020-11-12 15:30:28,996Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.334 -0.0002023 0.0002090 226 1.75 -12.05 22.14 2018-08-30 10:40:33.053502083 INFO 2020-11-12 15:30:29,002Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.344 -0.0000200 -0.0000213 78 0.77 2.81 -5.16 2018-08-30 10:41:19.402662992 INFO 2020-11-12 15:30:29,007Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.334 -0.0001460 -0.0012992 281 2.67 49.08 -90.03 2018-08-30 10:44:00.241590977 INFO 2020-11-12 15:30:29,012Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.344 -0.0026771 0.0007685 4859 32.39 -2.39 4.40 2018-08-30 11:16:24.018418074 INFO 2020-11-12 15:30:29,018Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.350 -0.0000895 -0.0000305 248 2.10 1.47 -2.70 2018-08-30 11:18:30.218341112 INFO 2020-11-12 15:30:29,023Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.333 -0.0032848 -0.0001662 4955 33.34 0.50 -0.92 2018-08-30 11:51:51.284810066 INFO 2020-11-12 15:30:29,029Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.338 -0.0000305 -0.0000312 30 0.46 6.90 -12.69 2018-08-30 11:52:18.976247072 INFO 2020-11-12 15:30:29,034Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.328 -0.0023220 -0.0006082 4664 31.10 1.97 -3.62 2018-08-30 12:23:25.448887110 INFO 2020-11-12 15:30:29,040Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.335 0.0000948 0.0000675 245 2.05 -3.32 6.11 2018-08-30 12:25:28.580751896 INFO 2020-11-12 15:30:29,045Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.359 -0.0025572 -0.0000731 4719 31.51 0.23 -0.43 2018-08-30 12:56:59.418685913 INFO 2020-11-12 15:30:29,051Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.329 -0.0001730 -0.0002037 728 5.65 3.62 -6.68 2018-08-30 13:02:39.066018104 INFO 2020-11-12 15:30:29,057Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.353 -0.0019983 -0.0003095 5140 34.27 0.91 -1.67 2018-08-30 13:36:55.585303068 INFO 2020-11-12 15:30:29,063Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.347 0.0000508 -0.0000072 163 1.55 0.46 -0.86 2018-08-30 13:38:29.179616928 INFO 2020-11-12 15:30:29,068Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.331 -0.0009234 -0.0002927 5292 35.63 0.83 -1.52 2018-08-30 14:14:07.455066919 INFO 2020-11-12 15:30:29,074Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.319 -0.0005687 0.0002230 39 0.58 -38.32 70.72 2018-08-30 14:14:42.930876017 INFO 2020-11-12 15:30:29,080Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.353 -0.0017863 0.0004472 5310 35.61 -1.26 2.33 2018-08-30 14:50:19.904189110 INFO 2020-11-12 15:30:29,086Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.305 -0.0000155 -0.0000037 40 0.58 0.63 -1.17 2018-08-30 14:50:55.145239115 INFO 2020-11-12 15:30:29,091Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.350 -0.0012133 0.0002005 5293 35.60 -0.56 1.04 2018-08-30 15:26:31.679416895 INFO 2020-11-12 15:30:29,098Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 4.889 0.0000098 -0.0000025 40 0.52 0.48 -0.89 2018-08-30 15:27:03.170124054 INFO 2020-11-12 15:30:29,103Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.364 -0.0013399 0.0005944 5364 35.89 -1.66 3.07 2018-08-30 16:03:01.574213028 INFO 2020-11-12 15:30:29,109Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.354 0.0000347 -0.0000260 845 6.19 0.42 -0.78 2018-08-30 16:09:13.260859012 INFO 2020-11-12 15:30:29,115Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.332 -0.0009940 0.0005984 5326 35.68 -1.67 3.11 2018-08-30 16:44:54.321719885 INFO 2020-11-12 15:30:29,121Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.347 -0.0000223 -0.0000420 820 6.01 0.70 -1.29 2018-08-30 16:50:55.415122032 INFO 2020-11-12 15:30:29,127Z lrauvNc4ToNetcdf.py nudge_coords():754 50: - - - 525 3.95 - - INFO 2020-11-12 15:30:29,127Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 147485 INFO 2020-11-12 15:30:29,153Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180829T230808/20180830T175452/data.csv INFO 2020-11-12 15:30:29,200Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:30:29,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:30:30,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T000808/201808300008_201808301654_2S_scieng.nc INFO 2020-11-12 15:30:30,038Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808300008_201808301654.nc4 INFO 2020-11-12 15:30:30,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T165454/201808301655_201808301830.nc4 file... INFO 2020-11-12 15:30:30,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808301655_201808301830.nc4 INFO 2020-11-12 15:30:31,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T165454/201808301655_201808301830.nc4 INFO 2020-11-12 15:30:31,568Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:31,782Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:31,992Z lrauvNc4ToNetcdf.py createSeries():241 depth : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:32,210Z lrauvNc4ToNetcdf.py createSeries():241 time : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:32,430Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:32,640Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:32,857Z lrauvNc4ToNetcdf.py createSeries():241 depth : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:33,079Z lrauvNc4ToNetcdf.py createSeries():241 time : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:33,297Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:33,505Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:33,716Z lrauvNc4ToNetcdf.py createSeries():241 depth : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:33,935Z lrauvNc4ToNetcdf.py createSeries():241 time : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:34,154Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:34,363Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:34,571Z lrauvNc4ToNetcdf.py createSeries():241 depth : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:34,789Z lrauvNc4ToNetcdf.py createSeries():241 time : 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:34,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:30:34,998Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 12 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:30:35,041Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 11 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:30:35,087Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 11 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:30:35,132Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_salinity: 2 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:30:35,146Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_temperature: 2 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:30:35,161Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:30:35,330Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 22 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:35,413Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 22 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:30:35,497Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 22 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:30:35,580Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 22 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:30:35,663Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:35,677Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:35,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:35,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:30:35,717Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:30:35,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:30:35,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:30:35,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:30:35,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:30:35,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:30:35,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:30:35,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:30:35,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:30:35,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:35,942Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:36,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:36,102Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:36,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:36,262Z lrauvNc4ToNetcdf.py createSeries():241 depth : 30 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:36,420Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:36,447Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:36,649Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:36,675Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:36,875Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:36,901Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 29 v_t values found before 2018-08-30 16:55:00 and after 2018-08-30 18:30:00 INFO 2020-11-12 15:30:37,100Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:37,101Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T165454/201808301655_201808301830.nc4 INFO 2020-11-12 15:30:37,606Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:30:37,607Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:30:37,609Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.322 0.0000360 -0.0000717 1585 12.12 0.59 -1.10 2018-08-30 17:12:55.118602991 INFO 2020-11-12 15:30:37,614Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.301 0.0000520 0.0000033 808 6.34 -0.05 0.10 2018-08-30 17:19:15.976591110 INFO 2020-11-12 15:30:37,618Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.240 -0.0027865 0.0004312 5365 35.81 -1.20 2.23 2018-08-30 17:55:04.878776073 INFO 2020-11-12 15:30:37,623Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.305 -0.0005538 -0.0000850 1306 9.79 0.87 -1.61 2018-08-30 18:04:52.705161095 INFO 2020-11-12 15:30:37,628Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.350 -0.0021083 0.0000678 2786 20.12 -0.34 0.62 2018-08-30 18:25:00.472457886 INFO 2020-11-12 15:30:37,632Z lrauvNc4ToNetcdf.py nudge_coords():754 6: - - - 701 5.19 - - INFO 2020-11-12 15:30:37,633Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 12551 INFO 2020-11-12 15:30:37,662Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180830T155506/20180830T193011/data.csv INFO 2020-11-12 15:30:37,700Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:30:37,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:30:38,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T165454/201808301655_201808301830_2S_scieng.nc INFO 2020-11-12 15:30:38,356Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808301655_201808301830.nc4 INFO 2020-11-12 15:30:39,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T182849/201808301829_201808302135.nc4 file... INFO 2020-11-12 15:30:39,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808301829_201808302135.nc4 INFO 2020-11-12 15:30:43,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T182849/201808301829_201808302135.nc4 INFO 2020-11-12 15:30:43,446Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:43,812Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:44,174Z lrauvNc4ToNetcdf.py createSeries():241 depth : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:44,536Z lrauvNc4ToNetcdf.py createSeries():241 time : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:44,898Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:45,259Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:45,621Z lrauvNc4ToNetcdf.py createSeries():241 depth : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:45,986Z lrauvNc4ToNetcdf.py createSeries():241 time : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:46,350Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:46,707Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:47,065Z lrauvNc4ToNetcdf.py createSeries():241 depth : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:47,425Z lrauvNc4ToNetcdf.py createSeries():241 time : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:47,785Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:48,142Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:48,500Z lrauvNc4ToNetcdf.py createSeries():241 depth : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:48,859Z lrauvNc4ToNetcdf.py createSeries():241 time : 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:49,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:30:49,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:30:49,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:30:49,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:30:49,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:30:49,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:30:49,743Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:30:50,064Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 5 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,260Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:50,263Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 5 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,461Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:30:50,463Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 6 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:30:50,663Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 5 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:30:50,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:50,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:50,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:30:50,960Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:30:50,966Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:30:50,971Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:30:50,977Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:30:50,979Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 1 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:50,994Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:30:50,995Z lrauvNc4ToNetcdf.py createSeries():241 platform_elevator_angle: 2 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:51,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:30:51,092Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:30:51,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:30:51,277Z lrauvNc4ToNetcdf.py createSeries():241 platform_propeller_rotation_rate: 3 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:51,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:30:51,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:51,485Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:51,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:51,807Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:52,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:52,132Z lrauvNc4ToNetcdf.py createSeries():241 depth : 37 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:52,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:52,481Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:52,836Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:52,861Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:53,215Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:53,240Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 36 v_t values found before 2018-08-30 18:29:00 and after 2018-08-30 21:35:00 INFO 2020-11-12 15:30:53,594Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:53,595Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T182849/201808301829_201808302135.nc4 INFO 2020-11-12 15:30:54,391Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:30:54,392Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:30:54,393Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.342 -0.0000273 0.0000043 48 0.32 -1.37 2.54 2018-08-30 18:30:51.991542101 INFO 2020-11-12 15:30:54,398Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.343 -0.0002995 0.0000782 147 1.26 -6.17 11.45 2018-08-30 18:32:08.261557102 INFO 2020-11-12 15:30:54,402Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.340 -0.0003753 0.0000343 1143 8.38 -0.41 0.76 2018-08-30 18:40:31.694998026 INFO 2020-11-12 15:30:54,407Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.334 -0.0002657 -0.0000495 390 3.70 1.34 -2.48 2018-08-30 18:44:13.994893074 INFO 2020-11-12 15:30:54,411Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.228 -0.0001673 0.0000830 288 2.83 -2.93 5.43 2018-08-30 18:47:04.268443108 INFO 2020-11-12 15:30:54,416Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.265 0.0012304 0.0024921 4725 31.61 -7.85 14.61 2018-08-30 19:18:41.142007113 INFO 2020-11-12 15:30:54,421Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.333 -0.0002103 -0.0000113 497 4.07 0.28 -0.52 2018-08-30 19:22:45.568037033 INFO 2020-11-12 15:30:54,425Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.266 0.0001456 0.0031856 5328 35.61 -8.90 16.58 2018-08-30 19:58:22.634711027 INFO 2020-11-12 15:30:54,430Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.294 -0.0002695 0.0000620 221 1.97 -3.14 5.84 2018-08-30 20:00:20.974073887 INFO 2020-11-12 15:30:54,435Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.304 -0.0002955 0.0038538 4920 32.99 -11.62 21.64 2018-08-30 20:33:20.916888952 INFO 2020-11-12 15:30:54,439Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.329 -0.0001707 -0.0003173 334 3.90 8.09 -15.07 2018-08-30 20:37:15.452455044 INFO 2020-11-12 15:30:54,444Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.313 -0.0002612 0.0001273 273 2.65 -4.79 8.92 2018-08-30 20:39:54.616882086 INFO 2020-11-12 15:30:54,449Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.277 -0.0007293 0.0002547 2480 16.55 -1.53 2.85 2018-08-30 20:56:28.074387074 INFO 2020-11-12 15:30:54,453Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.337 -0.0005558 0.0010537 1264 9.82 -10.66 19.88 2018-08-30 21:06:17.784813881 INFO 2020-11-12 15:30:54,458Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.289 0.0000335 -0.0002400 1009 7.71 3.10 -5.77 2018-08-30 21:14:00.751148939 INFO 2020-11-12 15:30:54,463Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.351 0.0001283 0.0003265 1106 7.97 -4.07 7.59 2018-08-30 21:21:59.265311003 INFO 2020-11-12 15:30:54,467Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.350 -0.0006210 0.0002460 959 6.96 -3.51 6.55 2018-08-30 21:28:57.174520016 INFO 2020-11-12 15:30:54,471Z lrauvNc4ToNetcdf.py nudge_coords():754 18: - - - 839 6.28 - - INFO 2020-11-12 15:30:54,471Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 25971 INFO 2020-11-12 15:30:54,494Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180830T172900/20180830T223514/data.csv INFO 2020-11-12 15:30:54,560Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:30:54,564Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:30:54,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T182849/201808301829_201808302135_2S_scieng.nc INFO 2020-11-12 15:30:54,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808301829_201808302135.nc4 INFO 2020-11-12 15:30:55,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T213803/201808302138_201808302147.nc4 file... INFO 2020-11-12 15:30:55,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808302138_201808302147.nc4 INFO 2020-11-12 15:30:56,224Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T213803/201808302138_201808302147.nc4 INFO 2020-11-12 15:30:56,253Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,329Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,404Z lrauvNc4ToNetcdf.py createSeries():241 depth : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,483Z lrauvNc4ToNetcdf.py createSeries():241 time : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,561Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,634Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,707Z lrauvNc4ToNetcdf.py createSeries():241 depth : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,785Z lrauvNc4ToNetcdf.py createSeries():241 time : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,862Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:56,935Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,009Z lrauvNc4ToNetcdf.py createSeries():241 depth : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,086Z lrauvNc4ToNetcdf.py createSeries():241 time : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,164Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,236Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,308Z lrauvNc4ToNetcdf.py createSeries():241 depth : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,385Z lrauvNc4ToNetcdf.py createSeries():241 time : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:30:57,451Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:30:57,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:30:57,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:30:57,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:30:57,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:30:57,462Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:30:57,488Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:30:57,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:30:57,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:30:57,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:30:57,505Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:30:57,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:30:57,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:30:57,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:30:57,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:30:57,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:30:57,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:30:57,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:30:57,547Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:30:57,554Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:30:57,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:30:57,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:30:57,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:30:57,568Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:57,586Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,602Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:57,603Z lrauvNc4ToNetcdf.py createSeries():241 depth : 87 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:30:57,644Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 85 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,706Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:57,729Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 85 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,791Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:57,814Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 85 v_t values found before 2018-08-30 21:38:00 and after 2018-08-30 21:47:00 INFO 2020-11-12 15:30:57,875Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:30:57,875Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T213803/201808302138_201808302147.nc4 INFO 2020-11-12 15:30:58,105Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:30:58,106Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:30:58,107Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.352 -0.0000203 0.0000385 95 0.72 -5.28 9.86 2018-08-30 21:41:49.324214935 INFO 2020-11-12 15:30:58,112Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 775 5.86 - - INFO 2020-11-12 15:30:58,112Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 870 INFO 2020-11-12 15:30:58,134Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180830T203814/20180830T224740/data.csv INFO 2020-11-12 15:30:58,170Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:30:58,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:30:58,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T213803/201808302138_201808302147_2S_scieng.nc INFO 2020-11-12 15:30:58,483Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808302138_201808302147.nc4 INFO 2020-11-12 15:31:01,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T214841/201808302148_201808311448.nc4 file... INFO 2020-11-12 15:31:01,168Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808302148_201808311448.nc4 INFO 2020-11-12 15:31:02,961Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T214841/201808302148_201808311448.nc4 INFO 2020-11-12 15:31:03,013Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:04,893Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:06,731Z lrauvNc4ToNetcdf.py createSeries():241 depth : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:08,578Z lrauvNc4ToNetcdf.py createSeries():241 time : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:10,426Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:12,298Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:14,153Z lrauvNc4ToNetcdf.py createSeries():241 depth : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:15,999Z lrauvNc4ToNetcdf.py createSeries():241 time : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:17,885Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:19,721Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:21,550Z lrauvNc4ToNetcdf.py createSeries():241 depth : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:23,424Z lrauvNc4ToNetcdf.py createSeries():241 time : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:25,256Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:27,093Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:28,926Z lrauvNc4ToNetcdf.py createSeries():241 depth : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:30,816Z lrauvNc4ToNetcdf.py createSeries():241 time : 21 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:32,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:31:32,648Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 8 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:33,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:31:33,328Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 8 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:34,040Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:31:34,046Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 8 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:34,756Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:31:34,759Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_salinity: 1 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:34,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:31:34,911Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_temperature: 1 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:35,062Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:31:35,080Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:36,878Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:31:36,890Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 17 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:38,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:31:38,293Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 17 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:39,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:31:39,682Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 17 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:41,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:31:41,071Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 17 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:42,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:31:42,470Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:42,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:31:42,621Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 2 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:42,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:31:42,792Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:31:42,811Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:31:42,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:31:42,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:31:42,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:31:42,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:31:43,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:31:43,724Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:31:44,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:31:47,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:31:47,098Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:31:47,110Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:48,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:31:48,927Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:50,713Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:31:50,726Z lrauvNc4ToNetcdf.py createSeries():241 depth : 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:52,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:31:52,580Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:54,371Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:31:54,417Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:56,236Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:31:56,281Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 20 v_t values found before 2018-08-30 21:48:00 and after 2018-08-31 14:48:00 INFO 2020-11-12 15:31:58,104Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:31:58,108Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T214841/201808302148_201808311448.nc4 INFO 2020-11-12 15:32:01,913Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:32:01,914Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:32:01,916Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.338 -0.0000725 0.0000335 162 1.26 -2.65 4.94 2018-08-30 21:51:59.323709965 INFO 2020-11-12 15:32:01,921Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.327 -0.0002813 0.0005785 989 7.65 -7.49 14.01 2018-08-30 21:59:38.905165911 INFO 2020-11-12 15:32:01,926Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.341 -0.0000278 0.0001023 268 2.59 -3.91 7.31 2018-08-30 22:02:14.867705107 INFO 2020-11-12 15:32:01,931Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.350 -0.0054038 0.0014722 4698 31.32 -4.57 8.71 2018-08-30 22:33:34.663424969 INFO 2020-11-12 15:32:01,936Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.340 0.0001162 0.0000190 181 1.74 -1.06 2.02 2018-08-30 22:35:19.540591955 INFO 2020-11-12 15:32:01,941Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.352 -0.0056288 0.0015495 4719 31.56 -4.68 9.10 2018-08-30 23:06:53.452621937 INFO 2020-11-12 15:32:01,947Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.333 0.0002380 0.0000048 30 0.46 -1.01 1.96 2018-08-30 23:07:21.266532898 INFO 2020-11-12 15:32:01,951Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.330 -0.0056093 0.0025060 4800 32.05 -7.31 14.49 2018-08-30 23:39:24.719152927 INFO 2020-11-12 15:32:01,957Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.343 0.0004265 -0.0006940 234 1.98 32.74 -64.86 2018-08-30 23:41:24.076075077 INFO 2020-11-12 15:32:01,962Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.293 -0.0049463 0.0017463 4994 33.35 -4.81 9.70 2018-08-31 00:14:45.207900047 INFO 2020-11-12 15:32:01,967Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.319 0.0000342 0.0001993 566 4.19 -4.36 8.81 2018-08-31 00:18:57.237096071 INFO 2020-11-12 15:32:01,972Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.328 -0.0044007 0.0014708 4669 31.18 -4.26 8.74 2018-08-31 00:50:08.364074945 INFO 2020-11-12 15:32:01,977Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.304 0.0000795 -0.0000082 344 3.02 0.24 -0.50 2018-08-31 00:53:09.840801954 INFO 2020-11-12 15:32:01,982Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.346 -0.0033745 0.0012653 4703 31.43 -3.59 7.46 2018-08-31 01:24:36.194487095 INFO 2020-11-12 15:32:01,987Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.353 -0.0000080 0.0000610 529 4.24 -1.28 2.67 2018-08-31 01:28:50.745130062 INFO 2020-11-12 15:32:01,992Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.343 -0.0027847 0.0009319 5013 33.56 -2.46 5.15 2018-08-31 02:02:24.882672071 INFO 2020-11-12 15:32:01,998Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.112 0.0000582 -0.0000537 31 0.49 9.75 -20.43 2018-08-31 02:02:54.492402077 INFO 2020-11-12 15:32:02,003Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.350 -0.0028545 0.0007163 4680 31.26 -2.03 4.25 2018-08-31 02:34:10.048820972 INFO 2020-11-12 15:32:02,008Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.333 -0.0000565 0.0000318 237 1.84 -1.53 3.21 2018-08-31 02:36:00.748801947 INFO 2020-11-12 15:32:02,013Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.347 -0.0028022 -0.0006443 3991 26.84 2.13 -4.45 2018-08-31 03:02:51.365396023 INFO 2020-11-12 15:32:02,018Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.340 0.0004488 -0.0018170 873 6.40 25.25 -52.60 2018-08-31 03:09:15.844824076 INFO 2020-11-12 15:32:02,023Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.320 -0.0004310 0.0015248 233 2.30 -58.88 123.01 2018-08-31 03:11:34.061295033 INFO 2020-11-12 15:32:02,028Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.374 -0.0054464 -0.0011246 4679 31.24 3.13 -6.67 2018-08-31 03:42:49.065458059 INFO 2020-11-12 15:32:02,034Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.312 -0.0001075 -0.0002050 390 3.34 5.33 -11.36 2018-08-31 03:46:10.124522924 INFO 2020-11-12 15:32:02,039Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.386 -0.0047206 -0.0007190 4669 31.13 1.97 -4.28 2018-08-31 04:17:18.211404085 INFO 2020-11-12 15:32:02,044Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.314 -0.0000423 -0.0000953 386 3.39 2.40 -5.22 2018-08-31 04:20:41.890496016 INFO 2020-11-12 15:32:02,050Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.338 -0.0311230 0.0019224 35664 238.09 -0.69 1.50 2018-08-31 08:18:47.579772949 INFO 2020-11-12 15:32:02,058Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.320 0.0000072 -0.0000007 31 0.45 0.13 -0.27 2018-08-31 08:19:15.188030005 INFO 2020-11-12 15:32:02,063Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.333 0.0000118 -0.0000203 46 0.30 5.72 -12.43 2018-08-31 08:19:33.759655952 INFO 2020-11-12 15:32:02,068Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.327 0.0001293 -0.0008200 671 5.11 13.69 -29.71 2018-08-31 08:24:41.005006075 INFO 2020-11-12 15:32:02,073Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.303 0.0000383 0.0000233 34 0.46 -4.29 9.30 2018-08-31 08:25:09.301434994 INFO 2020-11-12 15:32:02,078Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.331 -0.0046533 0.0031208 4726 31.51 -8.59 18.35 2018-08-31 08:56:40.027105093 INFO 2020-11-12 15:32:02,084Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.365 -0.0000383 -0.0002232 673 5.06 3.82 -8.17 2018-08-31 09:01:44.243294954 INFO 2020-11-12 15:32:02,089Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.364 -0.0082784 0.0015003 9197 61.46 -2.15 4.52 2018-08-31 10:03:12.183218002 INFO 2020-11-12 15:32:02,095Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.333 0.0000480 -0.0000377 388 3.01 1.10 -2.32 2018-08-31 10:06:13.327872038 INFO 2020-11-12 15:32:02,101Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.344 0.0001185 -0.0000753 41 0.27 25.00 -52.49 2018-08-31 10:06:29.716442108 INFO 2020-11-12 15:32:02,106Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.344 0.0000690 -0.0001372 950 6.78 1.79 -3.75 2018-08-31 10:13:16.796456099 INFO 2020-11-12 15:32:02,111Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.336 0.0001536 -0.0001268 944 6.96 1.61 -3.38 2018-08-31 10:20:14.568743944 INFO 2020-11-12 15:32:02,116Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.345 -0.0000100 0.0000392 266 2.32 -1.49 3.13 2018-08-31 10:22:33.967530012 INFO 2020-11-12 15:32:02,122Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.343 -0.0058963 0.0022104 4675 31.26 -6.36 13.10 2018-08-31 10:53:49.962796926 INFO 2020-11-12 15:32:02,127Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.349 -0.0002147 -0.0000298 152 1.32 2.03 -4.18 2018-08-31 10:55:09.748723030 INFO 2020-11-12 15:32:02,133Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.326 -0.0060437 0.0017822 4895 32.84 -4.98 10.06 2018-08-31 11:28:00.397944927 INFO 2020-11-12 15:32:02,138Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.331 0.0000382 -0.0000272 210 1.77 1.41 -2.84 2018-08-31 11:29:46.962964058 INFO 2020-11-12 15:32:02,144Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.325 -0.0064302 0.0015805 4752 31.73 -4.66 9.23 2018-08-31 12:01:31.135128021 INFO 2020-11-12 15:32:02,149Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 0.342 0.0000342 -0.0000150 177 1.52 0.92 -1.82 2018-08-31 12:03:02.927711964 INFO 2020-11-12 15:32:02,155Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.350 -0.0064017 0.0008633 4648 31.09 -2.65 5.15 2018-08-31 12:34:08.518121004 INFO 2020-11-12 15:32:02,161Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.356 -0.0001143 -0.0001712 27 0.49 33.65 -65.32 2018-08-31 12:34:38.059216022 INFO 2020-11-12 15:32:02,166Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.348 -0.0060626 -0.0001720 4722 31.54 0.53 -1.01 2018-08-31 13:06:11.004528046 INFO 2020-11-12 15:32:02,172Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.334 0.0000045 -0.0000695 200 1.71 3.95 -7.52 2018-08-31 13:07:54.151137114 INFO 2020-11-12 15:32:02,177Z lrauvNc4ToNetcdf.py nudge_coords():724 49: 0.344 -0.0042184 -0.0010505 5031 33.56 3.09 -5.80 2018-08-31 13:41:28.286672115 INFO 2020-11-12 15:32:02,183Z lrauvNc4ToNetcdf.py nudge_coords():724 50: 0.342 -0.0000102 0.0000523 107 1.21 -4.29 8.04 2018-08-31 13:42:41.045269966 INFO 2020-11-12 15:32:02,189Z lrauvNc4ToNetcdf.py nudge_coords():724 51: 0.326 -0.0033023 0.0009176 4808 32.05 -2.82 5.30 2018-08-31 14:14:44.542578936 INFO 2020-11-12 15:32:02,194Z lrauvNc4ToNetcdf.py nudge_coords():724 52: 0.340 -0.0000823 0.0000137 190 1.70 -0.79 1.49 2018-08-31 14:16:26.844808102 INFO 2020-11-12 15:32:02,200Z lrauvNc4ToNetcdf.py nudge_coords():724 53: 0.328 -0.0026604 0.0014578 4671 31.25 -4.60 8.64 2018-08-31 14:47:42.356898069 INFO 2020-11-12 15:32:02,206Z lrauvNc4ToNetcdf.py nudge_coords():754 55: - - - 57 0.42 - - INFO 2020-11-12 15:32:02,206Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 150021 INFO 2020-11-12 15:32:02,236Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180830T204852/20180831T154808/data.csv INFO 2020-11-12 15:32:02,299Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:32:02,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:32:02,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180830T214841/201808302148_201808311448_2S_scieng.nc INFO 2020-11-12 15:32:02,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808302148_201808311448.nc4 INFO 2020-11-12 15:32:06,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180831T144808/201808311448_201809011730.nc4 file... INFO 2020-11-12 15:32:06,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201808311448_201809011730.nc4 INFO 2020-11-12 15:32:08,262Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180831T144808/201808311448_201809011730.nc4 INFO 2020-11-12 15:32:08,316Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:11,150Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:13,971Z lrauvNc4ToNetcdf.py createSeries():241 depth : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:16,796Z lrauvNc4ToNetcdf.py createSeries():241 time : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:19,568Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:22,366Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:25,141Z lrauvNc4ToNetcdf.py createSeries():241 depth : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:27,945Z lrauvNc4ToNetcdf.py createSeries():241 time : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:30,743Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:33,523Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:36,323Z lrauvNc4ToNetcdf.py createSeries():241 depth : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:39,110Z lrauvNc4ToNetcdf.py createSeries():241 time : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:41,895Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:44,687Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:47,474Z lrauvNc4ToNetcdf.py createSeries():241 depth : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:50,262Z lrauvNc4ToNetcdf.py createSeries():241 time : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:32:53,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:32:54,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:32:56,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:32:57,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:32:58,005Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:32:58,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:32:58,360Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:01,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:33:04,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:33:07,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:33:10,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:33:13,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:33:13,821Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:33:14,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:33:14,169Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:33:14,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:33:14,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:33:14,209Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:33:14,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:33:14,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:33:15,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:33:15,543Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:33:16,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:33:20,074Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:33:20,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:33:20,103Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:22,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:33:22,954Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:25,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:33:25,805Z lrauvNc4ToNetcdf.py createSeries():241 depth : 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:28,655Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:33:28,723Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:31,506Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:33:31,557Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:34,326Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:33:34,376Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 18 v_t values found before 2018-08-31 14:48:00 and after 2018-09-01 17:30:00 INFO 2020-11-12 15:33:37,144Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:33:37,149Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180831T144808/201808311448_201809011730.nc4 INFO 2020-11-12 15:33:42,948Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:33:42,950Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:33:42,952Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.350 -0.0003182 0.0001862 691 5.61 -3.27 6.15 2018-08-31 14:54:42.135425091 INFO 2020-11-12 15:33:42,957Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.353 -0.0013332 0.0010915 171 1.54 -69.68 131.12 2018-08-31 14:56:15.107220888 INFO 2020-11-12 15:33:42,963Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.328 0.0003888 -0.0009902 1633 11.63 8.40 -15.78 2018-08-31 15:07:53.307888031 INFO 2020-11-12 15:33:42,968Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.352 -0.0004573 0.0009205 853 6.44 -14.08 26.50 2018-08-31 15:14:19.899451017 INFO 2020-11-12 15:33:42,974Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.357 -0.0032351 0.0002026 4807 32.11 -0.62 1.17 2018-08-31 15:46:26.701567888 INFO 2020-11-12 15:33:42,980Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.341 -0.0001912 0.0002197 156 1.40 -15.50 29.09 2018-08-31 15:47:51.078675032 INFO 2020-11-12 15:33:42,985Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.320 -0.0030236 0.0011941 4645 31.08 -3.79 7.12 2018-08-31 16:18:56.000186920 INFO 2020-11-12 15:33:42,991Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.348 -0.0001820 0.0000093 177 1.58 -0.58 1.09 2018-08-31 16:20:31.262614012 INFO 2020-11-12 15:33:42,996Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.346 -0.0019186 0.0015396 4710 31.40 -4.83 9.09 2018-08-31 16:51:55.667516947 INFO 2020-11-12 15:33:43,002Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.346 -0.0013938 0.0002245 1303 9.91 -2.23 4.20 2018-08-31 17:01:50.698492050 INFO 2020-11-12 15:33:43,008Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.365 -0.0059667 0.0018694 6685 45.13 -4.07 7.68 2018-08-31 17:46:58.819515944 INFO 2020-11-12 15:33:43,014Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.341 -0.0001298 0.0000755 151 1.10 -6.72 12.66 2018-08-31 17:48:05.532493114 INFO 2020-11-12 15:33:43,019Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.343 -0.0000528 0.0000102 66 0.56 -1.78 3.36 2018-08-31 17:48:39.770607948 INFO 2020-11-12 15:33:43,024Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.348 -0.0003557 0.0000512 407 3.95 -1.27 2.40 2018-08-31 17:52:37.101768970 INFO 2020-11-12 15:33:43,030Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.349 0.0005707 0.0030697 4843 32.30 -9.34 17.61 2018-08-31 18:24:55.496182919 INFO 2020-11-12 15:33:43,036Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.350 0.0004605 -0.0000020 228 2.23 0.09 -0.17 2018-08-31 18:27:09.687741041 INFO 2020-11-12 15:33:43,041Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.342 -0.0004666 0.0042001 4876 32.57 -12.69 23.89 2018-08-31 18:59:44.478682995 INFO 2020-11-12 15:33:43,047Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.338 -0.0001413 -0.0000383 212 2.07 1.83 -3.44 2018-08-31 19:01:48.890897036 INFO 2020-11-12 15:33:43,052Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.322 -0.0010749 0.0044094 4700 31.34 -13.90 26.07 2018-08-31 19:33:09.726576090 INFO 2020-11-12 15:33:43,058Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.333 -0.0000360 0.0001608 933 6.97 -2.28 4.27 2018-08-31 19:40:08.491740942 INFO 2020-11-12 15:33:43,063Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.332 -0.0015887 0.0047157 4791 31.99 -14.60 27.32 2018-08-31 20:12:08.103986025 INFO 2020-11-12 15:33:43,069Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.346 -0.0001010 0.0000297 198 1.76 -1.67 3.12 2018-08-31 20:13:54.307636023 INFO 2020-11-12 15:33:43,074Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.356 -0.0011771 0.0043109 4807 32.26 -13.28 24.76 2018-08-31 20:46:10.400259972 INFO 2020-11-12 15:33:43,080Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.342 0.0000427 0.0003917 1131 8.04 -4.84 9.03 2018-08-31 20:54:13.100532055 INFO 2020-11-12 15:33:43,086Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.279 0.0000087 0.0000175 30 0.41 -4.26 7.94 2018-08-31 20:54:37.996249914 INFO 2020-11-12 15:33:43,092Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.327 -0.0000056 -0.0000027 13 0.08 3.38 -6.31 2018-08-31 20:54:43.141989946 INFO 2020-11-12 15:33:43,097Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.315 0.0000115 0.0000012 30 0.44 -0.26 0.49 2018-08-31 20:55:10.252090931 INFO 2020-11-12 15:33:43,102Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.354 0.0005193 0.0001247 2639 17.70 -0.70 1.30 2018-08-31 21:12:52.851731062 INFO 2020-11-12 15:33:43,108Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.337 0.0000210 0.0000233 221 1.98 -1.17 2.19 2018-08-31 21:14:51.784465075 INFO 2020-11-12 15:33:43,113Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.350 0.0000302 0.0001087 1722 11.60 -0.93 1.74 2018-08-31 21:26:28.110488892 INFO 2020-11-12 15:33:43,119Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.361 0.0005385 0.0001923 1514 11.07 -1.72 3.22 2018-08-31 21:37:32.795334101 INFO 2020-11-12 15:33:43,125Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.337 0.0000460 0.0000825 204 1.88 -4.35 8.12 2018-08-31 21:39:26.146841049 INFO 2020-11-12 15:33:43,130Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.352 0.0000055 0.0000069 45 0.37 -1.87 3.50 2018-08-31 21:39:48.588287115 INFO 2020-11-12 15:33:43,135Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.337 0.0002418 0.0001278 972 7.14 -1.78 3.32 2018-08-31 21:46:57.115686893 INFO 2020-11-12 15:33:43,141Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.358 -0.0043240 0.0019391 7767 53.46 -3.59 6.72 2018-08-31 22:40:25.051338911 INFO 2020-11-12 15:33:43,147Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.329 0.0000232 0.0001247 604 4.45 -2.78 5.20 2018-08-31 22:44:52.235892057 INFO 2020-11-12 15:33:43,153Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.343 0.0001192 -0.0000412 171 1.68 2.43 -4.54 2018-08-31 22:46:33.427781105 INFO 2020-11-12 15:33:43,158Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.354 0.0008100 -0.0001682 3563 24.48 0.68 -1.27 2018-08-31 23:11:02.631330013 INFO 2020-11-12 15:33:43,165Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.350 -0.0067751 0.0019580 10809 73.07 -2.65 4.97 2018-09-01 00:24:07.303508043 INFO 2020-11-12 15:33:43,171Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.339 0.0000372 0.0004055 271 2.55 -15.73 29.50 2018-09-01 00:26:40.580055952 INFO 2020-11-12 15:33:43,177Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.350 -0.0000157 0.0000003 41 0.27 -0.12 0.23 2018-09-01 00:26:56.955415010 INFO 2020-11-12 15:33:43,182Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.336 -0.0006838 0.0001227 963 7.11 -1.70 3.20 2018-09-01 00:34:04.159797907 INFO 2020-11-12 15:33:43,188Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.355 -0.0001525 -0.0000087 314 2.65 0.32 -0.61 2018-09-01 00:36:43.494313002 INFO 2020-11-12 15:33:43,194Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.351 -0.0036090 0.0019634 3193 21.33 -9.19 17.06 2018-09-01 00:58:03.613272905 INFO 2020-11-12 15:33:43,200Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 0.354 0.0001863 0.0000547 205 1.76 -3.10 5.75 2018-09-01 00:59:49.749627113 INFO 2020-11-12 15:33:43,205Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.349 0.0000387 0.0000232 145 1.36 -1.70 3.15 2018-09-01 01:01:11.891369104 INFO 2020-11-12 15:33:43,211Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.321 -0.0027044 -0.0007937 4946 33.08 2.43 -4.45 2018-09-01 01:34:17.135474920 INFO 2020-11-12 15:33:43,218Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.325 0.0000287 -0.0000055 137 1.39 0.40 -0.73 2018-09-01 01:35:40.750262976 INFO 2020-11-12 15:33:43,224Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.356 -0.0024196 -0.0005603 5032 33.55 1.70 -3.09 2018-09-01 02:09:14.047513008 INFO 2020-11-12 15:33:43,230Z lrauvNc4ToNetcdf.py nudge_coords():724 49: 0.321 -0.0000240 0.0000740 286 2.45 -3.08 5.59 2018-09-01 02:11:41.748142958 INFO 2020-11-12 15:33:43,237Z lrauvNc4ToNetcdf.py nudge_coords():724 50: 0.348 -0.0031739 0.0003533 5127 34.24 -1.06 1.91 2018-09-01 02:45:56.240793943 INFO 2020-11-12 15:33:43,243Z lrauvNc4ToNetcdf.py nudge_coords():724 51: 0.309 0.0004828 -0.0011678 182 1.80 66.90 -120.26 2018-09-01 02:47:44.607330084 INFO 2020-11-12 15:33:43,249Z lrauvNc4ToNetcdf.py nudge_coords():724 52: 0.335 -0.0026646 -0.0005511 4884 32.56 1.76 -3.14 2018-09-01 03:20:18.501703024 INFO 2020-11-12 15:33:43,255Z lrauvNc4ToNetcdf.py nudge_coords():724 53: 0.336 -0.0000287 -0.0000260 153 1.11 2.44 -4.35 2018-09-01 03:21:25.388587952 INFO 2020-11-12 15:33:43,261Z lrauvNc4ToNetcdf.py nudge_coords():724 54: 0.318 -0.0000057 -0.0000183 56 0.52 3.65 -6.50 2018-09-01 03:21:57.146426916 INFO 2020-11-12 15:33:43,267Z lrauvNc4ToNetcdf.py nudge_coords():724 55: 0.279 0.0001443 0.0000665 526 4.63 -1.50 2.66 2018-09-01 03:26:35.069319963 INFO 2020-11-12 15:33:43,273Z lrauvNc4ToNetcdf.py nudge_coords():724 56: 0.321 -0.0025300 -0.0009290 4785 31.92 3.06 -5.39 2018-09-01 03:58:30.348078012 INFO 2020-11-12 15:33:43,279Z lrauvNc4ToNetcdf.py nudge_coords():724 57: 0.348 0.0000573 -0.0000140 184 1.71 0.86 -1.52 2018-09-01 04:00:13.310832024 INFO 2020-11-12 15:33:43,285Z lrauvNc4ToNetcdf.py nudge_coords():724 58: 0.319 -0.0023771 -0.0005529 5106 34.09 1.72 -3.01 2018-09-01 04:34:19.296160936 INFO 2020-11-12 15:33:43,292Z lrauvNc4ToNetcdf.py nudge_coords():724 59: 0.358 0.0000870 0.0000178 798 6.24 -0.30 0.53 2018-09-01 04:40:34.284425020 INFO 2020-11-12 15:33:43,298Z lrauvNc4ToNetcdf.py nudge_coords():724 60: 0.338 -0.0020725 -0.0002323 5015 33.49 0.74 -1.29 2018-09-01 05:14:04.230097055 INFO 2020-11-12 15:33:43,304Z lrauvNc4ToNetcdf.py nudge_coords():724 61: 0.340 0.0002948 0.0004015 1184 8.86 -4.85 8.40 2018-09-01 05:22:55.944528103 INFO 2020-11-12 15:33:43,311Z lrauvNc4ToNetcdf.py nudge_coords():724 62: 0.351 -0.0022731 -0.0015348 4822 32.14 5.16 -8.85 2018-09-01 05:55:04.887830973 INFO 2020-11-12 15:33:43,317Z lrauvNc4ToNetcdf.py nudge_coords():724 63: 0.347 0.0003835 0.0001285 2236 16.65 -0.83 1.43 2018-09-01 06:11:44.429632902 INFO 2020-11-12 15:33:43,325Z lrauvNc4ToNetcdf.py nudge_coords():724 64: 0.073 -0.0109163 0.0033147 18606 124.24 -2.88 4.94 2018-09-01 08:15:59.067199945 INFO 2020-11-12 15:33:43,332Z lrauvNc4ToNetcdf.py nudge_coords():724 65: 0.340 0.0003655 0.0000348 907 6.48 -0.58 1.00 2018-09-01 08:22:28.250874043 INFO 2020-11-12 15:33:43,339Z lrauvNc4ToNetcdf.py nudge_coords():724 66: 0.344 0.0000122 0.0000070 45 0.39 -1.96 3.36 2018-09-01 08:22:51.853416920 INFO 2020-11-12 15:33:43,345Z lrauvNc4ToNetcdf.py nudge_coords():724 67: 0.358 0.0000002 -0.0000023 54 0.38 0.67 -1.14 2018-09-01 08:23:14.979242086 INFO 2020-11-12 15:33:43,352Z lrauvNc4ToNetcdf.py nudge_coords():724 68: 0.307 0.0003973 0.0000825 1130 8.52 -1.05 1.79 2018-09-01 08:31:46.686456919 INFO 2020-11-12 15:33:43,358Z lrauvNc4ToNetcdf.py nudge_coords():724 69: 0.342 -0.0043326 -0.0003572 5321 35.62 1.10 -1.86 2018-09-01 09:07:24.223310947 INFO 2020-11-12 15:33:43,365Z lrauvNc4ToNetcdf.py nudge_coords():724 70: 0.345 0.0001258 0.0000397 873 6.34 -0.69 1.16 2018-09-01 09:13:45.244901896 INFO 2020-11-12 15:33:43,372Z lrauvNc4ToNetcdf.py nudge_coords():724 71: 0.341 -0.0039368 -0.0003500 5336 35.61 1.09 -1.82 2018-09-01 09:49:22.469665051 INFO 2020-11-12 15:33:43,379Z lrauvNc4ToNetcdf.py nudge_coords():724 72: 0.352 0.0002665 -0.0000278 1010 7.24 0.43 -0.71 2018-09-01 09:56:37.260354042 INFO 2020-11-12 15:33:43,385Z lrauvNc4ToNetcdf.py nudge_coords():724 73: 0.358 -0.0000178 0.0002635 1188 8.57 -3.41 5.70 2018-09-01 10:05:11.618119001 INFO 2020-11-12 15:33:43,392Z lrauvNc4ToNetcdf.py nudge_coords():724 74: 0.344 0.0003614 0.0000044 998 7.17 -0.07 0.11 2018-09-01 10:12:22.196532965 INFO 2020-11-12 15:33:43,399Z lrauvNc4ToNetcdf.py nudge_coords():724 75: 0.347 0.0001413 0.0000155 302 2.52 -0.68 1.14 2018-09-01 10:14:53.705481052 INFO 2020-11-12 15:33:43,405Z lrauvNc4ToNetcdf.py nudge_coords():724 76: 0.309 -0.0041098 -0.0007149 4996 33.36 2.41 -3.97 2018-09-01 10:48:15.651345968 INFO 2020-11-12 15:33:43,412Z lrauvNc4ToNetcdf.py nudge_coords():724 77: 0.356 0.0001462 0.0000407 276 2.27 -2.02 3.32 2018-09-01 10:50:32.006686926 INFO 2020-11-12 15:33:43,419Z lrauvNc4ToNetcdf.py nudge_coords():724 78: 0.385 -0.0150353 0.0035346 19732 131.86 -3.02 4.97 2018-09-01 13:02:24.213449001 INFO 2020-11-12 15:33:43,427Z lrauvNc4ToNetcdf.py nudge_coords():724 79: 0.349 0.0000473 -0.0000730 249 1.96 4.19 -6.90 2018-09-01 13:04:22.246648073 INFO 2020-11-12 15:33:43,434Z lrauvNc4ToNetcdf.py nudge_coords():724 80: 0.345 0.0000295 0.0000023 46 0.30 -0.88 1.44 2018-09-01 13:04:40.656677008 INFO 2020-11-12 15:33:43,441Z lrauvNc4ToNetcdf.py nudge_coords():724 81: 0.335 -0.0000110 -0.0000031 51 0.55 0.64 -1.05 2018-09-01 13:05:14.365695953 INFO 2020-11-12 15:33:43,448Z lrauvNc4ToNetcdf.py nudge_coords():724 82: 0.349 -0.0024340 0.0009170 388 3.05 -33.82 55.72 2018-09-01 13:08:17.724783897 INFO 2020-11-12 15:33:43,454Z lrauvNc4ToNetcdf.py nudge_coords():724 83: 0.330 -0.0045937 0.0014171 5118 34.38 -4.71 7.64 2018-09-01 13:42:40.987015009 INFO 2020-11-12 15:33:43,462Z lrauvNc4ToNetcdf.py nudge_coords():724 84: 0.351 0.0007173 -0.0003222 510 3.71 9.91 -16.08 2018-09-01 13:46:24.189399004 INFO 2020-11-12 15:33:43,469Z lrauvNc4ToNetcdf.py nudge_coords():724 85: 0.348 -0.0068970 0.0020021 4959 33.22 -6.96 11.17 2018-09-01 14:19:37.759977102 INFO 2020-11-12 15:33:43,476Z lrauvNc4ToNetcdf.py nudge_coords():724 86: 0.352 -0.0002263 -0.0000685 307 2.36 3.36 -5.38 2018-09-01 14:21:59.664414883 INFO 2020-11-12 15:33:43,483Z lrauvNc4ToNetcdf.py nudge_coords():724 87: 0.336 -0.0056814 0.0008406 4923 32.81 -3.00 4.75 2018-09-01 14:54:48.892741919 INFO 2020-11-12 15:33:43,490Z lrauvNc4ToNetcdf.py nudge_coords():724 88: 0.340 0.0000817 0.0000225 312 2.67 -0.98 1.56 2018-09-01 14:57:29.742861986 INFO 2020-11-12 15:33:43,497Z lrauvNc4ToNetcdf.py nudge_coords():724 89: 0.343 -0.0049361 0.0002448 4993 33.53 -0.86 1.35 2018-09-01 15:31:01.884665966 INFO 2020-11-12 15:33:43,505Z lrauvNc4ToNetcdf.py nudge_coords():724 90: 0.363 0.0000058 0.0000407 449 3.33 -1.44 2.26 2018-09-01 15:34:22.235420942 INFO 2020-11-12 15:33:43,511Z lrauvNc4ToNetcdf.py nudge_coords():724 91: 0.359 -0.0042907 -0.0000209 4935 32.94 0.08 -0.12 2018-09-01 16:07:19.276834965 INFO 2020-11-12 15:33:43,519Z lrauvNc4ToNetcdf.py nudge_coords():724 92: 0.358 0.0000023 0.0000355 247 2.05 -2.06 3.21 2018-09-01 16:09:22.645380974 INFO 2020-11-12 15:33:43,526Z lrauvNc4ToNetcdf.py nudge_coords():724 93: 0.353 -0.0045845 -0.0001473 5014 33.63 0.53 -0.81 2018-09-01 16:43:00.687411070 INFO 2020-11-12 15:33:43,534Z lrauvNc4ToNetcdf.py nudge_coords():724 94: 0.315 -0.0000598 0.0001402 891 6.47 -2.60 4.02 2018-09-01 16:49:29.241259098 INFO 2020-11-12 15:33:43,542Z lrauvNc4ToNetcdf.py nudge_coords():754 96: - - - 5948 40.63 - - INFO 2020-11-12 15:33:43,542Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 234183 INFO 2020-11-12 15:33:43,572Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180831T134808/20180901T183007/data.csv INFO 2020-11-12 15:33:43,634Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:33:43,646Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:33:44,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180831T144808/201808311448_201809011730_2S_scieng.nc INFO 2020-11-12 15:33:44,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201808311448_201809011730.nc4 INFO 2020-11-12 15:33:45,255Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T172728/201809011727_201809012329.nc4 file... INFO 2020-11-12 15:33:45,256Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809011727_201809012329.nc4 INFO 2020-11-12 15:33:46,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T172728/201809011727_201809012329.nc4 INFO 2020-11-12 15:34:02,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:34:02,293Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:34:02,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:34:02,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:34:02,836Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:34:02,890Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:34:03,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:34:04,321Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:04,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:34:05,266Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:34:05,740Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:34:05,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:05,848Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:05,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:34:05,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:34:05,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:34:05,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:34:05,900Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:34:06,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:34:06,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:34:06,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:34:06,294Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:34:06,587Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:34:06,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:07,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:08,484Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:09,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:10,420Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:11,413Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:12,379Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:12,380Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T172728/201809011727_201809012329.nc4 INFO 2020-11-12 15:34:13,885Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:34:13,887Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:34:13,889Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.353 -0.0006344 0.0017971 1868 13.97 -15.47 23.84 2018-09-01 17:47:18.693475008 INFO 2020-11-12 15:34:13,894Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.357 -0.0000093 0.0001787 459 3.62 -5.94 9.15 2018-09-01 17:50:56.300242901 INFO 2020-11-12 15:34:13,899Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.325 -0.0026745 0.0005553 5310 35.65 -1.87 2.89 2018-09-01 18:26:35.712699890 INFO 2020-11-12 15:34:13,904Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.341 -0.0001215 0.0003082 851 6.13 -6.04 9.31 2018-09-01 18:32:44.065380096 INFO 2020-11-12 15:34:13,909Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.354 -0.0022761 0.0003414 5362 35.85 -1.15 1.76 2018-09-01 19:08:35.397006035 INFO 2020-11-12 15:34:13,914Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.332 0.0001018 0.0001483 482 3.48 -5.12 7.89 2018-09-01 19:12:04.905515909 INFO 2020-11-12 15:34:13,919Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.339 -0.0019489 0.0002363 4861 32.41 -0.88 1.35 2018-09-01 19:44:29.674427032 INFO 2020-11-12 15:34:13,924Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.340 0.0002820 0.0003275 948 8.09 -4.87 7.50 2018-09-01 19:52:35.542166948 INFO 2020-11-12 15:34:13,929Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.346 -0.0003098 0.0003345 1392 9.33 -4.32 6.64 2018-09-01 20:01:56.040014029 INFO 2020-11-12 15:34:13,933Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.350 0.0001347 0.0004158 1358 10.10 -4.96 7.63 2018-09-01 20:12:02.319909096 INFO 2020-11-12 15:34:13,938Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.336 0.0001757 0.0000910 1120 7.90 -1.39 2.13 2018-09-01 20:19:56.754292965 INFO 2020-11-12 15:34:13,943Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.333 0.0000553 0.0000245 158 1.38 -2.14 3.30 2018-09-01 20:21:19.741405010 INFO 2020-11-12 15:34:13,948Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.316 0.0002233 0.0002163 838 6.08 -4.28 6.60 2018-09-01 20:27:24.810815096 INFO 2020-11-12 15:34:13,953Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.345 -0.0001060 0.0001723 1517 10.21 -2.03 3.13 2018-09-01 20:37:37.562071085 INFO 2020-11-12 15:34:13,958Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.345 0.0001003 0.0004165 1147 8.28 -6.05 9.33 2018-09-01 20:45:54.462162018 INFO 2020-11-12 15:34:13,963Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.342 0.0005640 -0.0000138 1137 8.10 0.21 -0.32 2018-09-01 20:54:00.900237083 INFO 2020-11-12 15:34:13,967Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.349 -0.0000863 0.0005638 463 3.71 -18.27 28.18 2018-09-01 20:57:43.733119965 INFO 2020-11-12 15:34:13,972Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.349 0.0008426 0.0002868 3201 21.57 -1.60 2.46 2018-09-01 21:19:18.494043112 INFO 2020-11-12 15:34:13,977Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.346 -0.0003435 -0.0001853 1409 9.97 2.23 -3.44 2018-09-01 21:29:17.176114082 INFO 2020-11-12 15:34:13,982Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.352 -0.0002895 -0.0012007 964 6.92 20.87 -32.14 2018-09-01 21:36:12.877873898 INFO 2020-11-12 15:34:13,987Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.331 0.0000902 0.0000423 722 5.44 -0.94 1.44 2018-09-01 21:41:39.588712931 INFO 2020-11-12 15:34:13,992Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.337 0.0006582 0.0013043 387 3.15 -49.74 76.72 2018-09-01 21:44:49.009655952 INFO 2020-11-12 15:34:13,996Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.351 0.0001471 0.0000587 5090 34.83 -0.20 0.31 2018-09-01 22:19:39.036278963 INFO 2020-11-12 15:34:14,002Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.345 0.0002725 0.0000230 41 0.27 -10.39 16.02 2018-09-01 22:19:55.430170059 INFO 2020-11-12 15:34:14,006Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.347 0.0003845 0.0001088 1085 7.78 -1.68 2.59 2018-09-01 22:27:42.646985054 INFO 2020-11-12 15:34:14,011Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.342 0.0005258 0.0000425 1178 8.56 -0.60 0.92 2018-09-01 22:36:16.760210991 INFO 2020-11-12 15:34:14,016Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.348 0.0001735 0.0000582 486 3.60 -1.94 3.00 2018-09-01 22:39:53.042999983 INFO 2020-11-12 15:34:14,021Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.345 0.0001650 0.0001430 488 3.73 -4.61 7.11 2018-09-01 22:43:37.130188942 INFO 2020-11-12 15:34:14,028Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.360 0.0000035 0.0000059 15 0.09 -7.63 11.77 2018-09-01 22:43:43.117863894 INFO 2020-11-12 15:34:14,033Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.355 -0.0002858 -0.0002333 287 2.17 12.94 -19.96 2018-09-01 22:45:53.462904930 INFO 2020-11-12 15:34:14,038Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.354 0.0016912 0.0005310 3804 25.58 -2.49 3.85 2018-09-01 23:11:28.796951056 INFO 2020-11-12 15:34:14,043Z lrauvNc4ToNetcdf.py nudge_coords():754 32: - - - 2452 17.50 - - INFO 2020-11-12 15:34:14,043Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 50880 INFO 2020-11-12 15:34:14,073Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180901T162739/20180902T002858/data.csv INFO 2020-11-12 15:34:14,124Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:34:14,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:34:14,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T172728/201809011727_201809012329_2S_scieng.nc INFO 2020-11-12 15:34:14,579Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809011727_201809012329.nc4 INFO 2020-11-12 15:34:14,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233025/201809012330_201809012338.nc4 file... INFO 2020-11-12 15:34:14,762Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809012330_201809012338.nc4 INFO 2020-11-12 15:34:15,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233025/201809012330_201809012338.nc4 INFO 2020-11-12 15:34:15,967Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,041Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,111Z lrauvNc4ToNetcdf.py createSeries():241 depth : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,184Z lrauvNc4ToNetcdf.py createSeries():241 time : 52 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,256Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,335Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,404Z lrauvNc4ToNetcdf.py createSeries():241 depth : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,478Z lrauvNc4ToNetcdf.py createSeries():241 time : 52 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,550Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,619Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,697Z lrauvNc4ToNetcdf.py createSeries():241 depth : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,770Z lrauvNc4ToNetcdf.py createSeries():241 time : 52 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,842Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,911Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:16,982Z lrauvNc4ToNetcdf.py createSeries():241 depth : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,064Z lrauvNc4ToNetcdf.py createSeries():241 time : 52 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:34:17,128Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:34:17,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:34:17,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:34:17,135Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:34:17,137Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:34:17,139Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:34:17,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:17,167Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:34:17,172Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:34:17,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:34:17,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:34:17,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:34:17,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:34:17,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:34:17,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:34:17,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:34:17,210Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:34:17,215Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:34:17,221Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:34:17,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:34:17,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:34:17,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:34:17,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:34:17,242Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:17,258Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,273Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:17,275Z lrauvNc4ToNetcdf.py createSeries():241 depth : 53 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,290Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:17,314Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 39 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,371Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:17,393Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 39 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,458Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:17,481Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 39 v_t values found before 2018-09-01 23:30:00 and after 2018-09-01 23:38:00 INFO 2020-11-12 15:34:17,537Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:17,538Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233025/201809012330_201809012338.nc4 INFO 2020-11-12 15:34:17,757Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:34:17,759Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:34:17,761Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.350 0.0000673 -0.0002492 631 4.45 6.72 -10.38 2018-09-01 23:36:47.572258949 INFO 2020-11-12 15:34:17,765Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 184 1.65 - - INFO 2020-11-12 15:34:17,766Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 815 INFO 2020-11-12 15:34:17,802Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180901T223037/20180902T003827/data.csv INFO 2020-11-12 15:34:17,830Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:34:17,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:34:18,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233025/201809012330_201809012338_2S_scieng.nc INFO 2020-11-12 15:34:18,211Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809012330_201809012338.nc4 INFO 2020-11-12 15:34:20,023Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233927/201809012339_201809021149.nc4 file... INFO 2020-11-12 15:34:20,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809012339_201809021149.nc4 INFO 2020-11-12 15:34:21,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233927/201809012339_201809021149.nc4 INFO 2020-11-12 15:34:21,635Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:22,926Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:24,207Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:25,496Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:26,791Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:28,053Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:29,325Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:30,592Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:31,868Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:33,115Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:34,384Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:35,642Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:36,917Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:38,181Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:39,438Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:40,697Z lrauvNc4ToNetcdf.py createSeries():241 time : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:41,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:34:41,966Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 54 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:42,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:34:42,271Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 54 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:42,585Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:34:42,589Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 54 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:42,903Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:34:42,905Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_salinity: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:42,975Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:34:42,977Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_sea_water_temperature: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:43,046Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:34:43,055Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:44,300Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:34:44,306Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 106 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:44,921Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:44,927Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 106 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:45,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:34:45,542Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 106 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:46,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:34:46,151Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 106 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:46,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:34:46,766Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:46,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:46,836Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:46,905Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:34:46,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:34:46,943Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:34:46,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:34:46,958Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:34:46,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:34:46,967Z lrauvNc4ToNetcdf.py createSeries():241 platform_buoyancy_position: 8 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:47,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:34:47,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:34:47,381Z lrauvNc4ToNetcdf.py createSeries():241 platform_mass_position: 8 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:47,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:34:47,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:34:48,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:34:48,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:48,399Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:49,633Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:49,643Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:50,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:50,875Z lrauvNc4ToNetcdf.py createSeries():241 depth : 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:52,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:34:52,164Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:53,406Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:53,442Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:54,680Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:54,720Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 11 v_t values found before 2018-09-01 23:39:00 and after 2018-09-02 11:49:00 INFO 2020-11-12 15:34:55,963Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:34:55,965Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233927/201809012339_201809021149.nc4 INFO 2020-11-12 15:34:58,595Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:34:58,596Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:34:58,598Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.332 0.0005507 -0.0000120 1100 8.39 0.17 -0.27 2018-09-01 23:52:56.214766026 INFO 2020-11-12 15:34:58,603Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.349 -0.0056443 0.0004573 518 4.03 -13.60 21.01 2018-09-01 23:56:58.591727972 INFO 2020-11-12 15:34:58,608Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.361 0.0027729 0.0026247 3151 21.05 -15.05 23.10 2018-09-02 00:18:02.244896889 INFO 2020-11-12 15:34:58,613Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.356 -0.0000052 0.0000257 111 0.92 -3.38 5.19 2018-09-02 00:18:57.638051987 INFO 2020-11-12 15:34:58,618Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.356 -0.0026848 0.0027690 3369 22.46 -14.96 22.85 2018-09-02 00:41:25.609976053 INFO 2020-11-12 15:34:58,623Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.344 0.0001333 0.0000940 675 4.93 -2.31 3.53 2018-09-02 00:46:22.026354074 INFO 2020-11-12 15:34:58,628Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.335 -0.0038467 0.0016677 3221 21.52 -9.47 14.36 2018-09-02 01:07:53.871145964 INFO 2020-11-12 15:34:58,633Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.304 0.0001425 -0.0000345 136 1.09 3.88 -5.88 2018-09-02 01:08:59.535279988 INFO 2020-11-12 15:34:58,638Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.338 -0.0037179 0.0017348 3150 21.06 -10.14 15.27 2018-09-02 01:30:03.251419067 INFO 2020-11-12 15:34:58,643Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.345 -0.0000710 -0.0000368 127 1.18 3.85 -5.79 2018-09-02 01:31:14.329097986 INFO 2020-11-12 15:34:58,648Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.353 -0.0040200 0.0014073 3239 21.70 -8.04 12.02 2018-09-02 01:52:56.456866026 INFO 2020-11-12 15:34:58,653Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.355 0.0000480 -0.0000093 122 1.03 1.13 -1.69 2018-09-02 01:53:58.417500973 INFO 2020-11-12 15:34:58,658Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.349 -0.0035322 0.0014870 3017 20.15 -9.19 13.67 2018-09-02 02:14:08.076893091 INFO 2020-11-12 15:34:58,663Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.346 -0.0018137 0.0007468 865 6.17 -15.06 22.42 2018-09-02 02:20:18.816082001 INFO 2020-11-12 15:34:58,668Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.329 0.0000103 -0.0000407 600 4.46 1.14 -1.69 2018-09-02 02:24:46.577224970 INFO 2020-11-12 15:34:58,673Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.351 -0.0001873 0.0000155 433 3.44 -0.56 0.84 2018-09-02 02:28:13.260116100 INFO 2020-11-12 15:34:58,678Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.314 -0.0030604 -0.0004322 4685 31.44 1.69 -2.55 2018-09-02 02:59:40.128068924 INFO 2020-11-12 15:34:58,683Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.330 -0.0000247 0.0001667 412 3.15 -6.51 9.81 2018-09-02 03:02:49.336623907 INFO 2020-11-12 15:34:58,688Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.352 -0.0043999 0.0005836 4789 31.97 -2.22 3.38 2018-09-02 03:34:47.823021889 INFO 2020-11-12 15:34:58,693Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.355 0.0003660 0.0001397 397 2.93 -5.80 8.84 2018-09-02 03:37:43.991941929 INFO 2020-11-12 15:34:58,698Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.352 -0.0043546 0.0007791 4433 29.60 -3.17 4.88 2018-09-02 04:07:20.349833965 INFO 2020-11-12 15:34:58,703Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.311 -0.0000228 0.0000995 186 1.50 -7.96 12.26 2018-09-02 04:08:50.985866070 INFO 2020-11-12 15:34:58,708Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.357 0.0000303 0.0000998 236 2.04 -5.87 9.05 2018-09-02 04:10:54.065860033 INFO 2020-11-12 15:34:58,713Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.355 0.0001975 0.0003952 869 6.45 -7.37 11.35 2018-09-02 04:17:21.423073053 INFO 2020-11-12 15:34:58,718Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.233 0.0000450 0.0001420 367 2.95 -5.79 8.93 2018-09-02 04:20:18.753748894 INFO 2020-11-12 15:34:58,723Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.339 0.0009700 0.0021058 6544 45.28 -5.58 8.62 2018-09-02 05:05:35.823402882 INFO 2020-11-12 15:34:58,728Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.319 0.0002997 0.0003517 529 3.86 -10.93 16.89 2018-09-02 05:09:27.663809061 INFO 2020-11-12 15:34:58,733Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.344 0.0002840 0.0035110 3964 27.16 -15.43 23.95 2018-09-02 05:36:37.855066061 INFO 2020-11-12 15:34:58,738Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.354 -0.0003475 -0.0032163 1015 7.40 52.09 -80.53 2018-09-02 05:44:02.328792095 INFO 2020-11-12 15:34:58,743Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.348 -0.0000333 0.0000067 330 2.48 -0.32 0.50 2018-09-02 05:46:31.758083105 INFO 2020-11-12 15:34:58,748Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.330 -0.0000600 0.0000428 538 4.52 -1.14 1.76 2018-09-02 05:51:03.199593067 INFO 2020-11-12 15:34:58,753Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.343 -0.0015886 0.0001103 6385 43.46 -0.30 0.47 2018-09-02 06:34:31.284142971 INFO 2020-11-12 15:34:58,758Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.345 -0.0005697 0.0001358 1267 9.07 -1.79 2.77 2018-09-02 06:43:36.032988071 INFO 2020-11-12 15:34:58,763Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.337 0.0000082 -0.0000300 521 4.29 0.84 -1.30 2018-09-02 06:47:53.629259109 INFO 2020-11-12 15:34:58,768Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.307 -0.0003155 0.0000955 805 6.02 -1.90 2.94 2018-09-02 06:53:55.211044073 INFO 2020-11-12 15:34:58,773Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.077 -0.0004515 0.0004552 4460 30.26 -1.80 2.79 2018-09-02 07:24:11.296540022 INFO 2020-11-12 15:34:58,779Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.348 -0.0007667 -0.0001310 1117 7.90 1.99 -3.07 2018-09-02 07:32:05.381006956 INFO 2020-11-12 15:34:58,784Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.346 -0.0000150 -0.0003897 1204 8.59 5.44 -8.41 2018-09-02 07:40:41.128994942 INFO 2020-11-12 15:34:58,789Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.346 -0.0017515 0.0002867 7561 53.06 -0.65 1.00 2018-09-02 08:33:45.291970015 INFO 2020-11-12 15:34:58,794Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.347 0.0028248 0.0014833 1396 9.75 -18.20 28.19 2018-09-02 08:43:30.788153887 INFO 2020-11-12 15:34:58,799Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.345 -0.0025682 -0.0014555 1093 7.77 22.43 -34.69 2018-09-02 08:51:17.641103983 INFO 2020-11-12 15:34:58,805Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.346 -0.0010078 -0.0000313 1289 8.92 0.42 -0.65 2018-09-02 09:00:13.499964952 INFO 2020-11-12 15:34:58,810Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.351 -0.0002917 -0.0001240 1226 8.65 1.72 -2.66 2018-09-02 09:08:53.091855049 INFO 2020-11-12 15:34:58,815Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.342 -0.0003483 -0.0000100 1177 8.36 0.14 -0.22 2018-09-02 09:17:15.165313959 INFO 2020-11-12 15:34:58,820Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 0.332 -0.0006313 0.0001778 1475 10.36 -2.06 3.18 2018-09-02 09:27:37.128345013 INFO 2020-11-12 15:34:58,825Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.355 0.0011113 0.0000007 1161 8.22 -0.01 0.02 2018-09-02 09:35:50.959810019 INFO 2020-11-12 15:34:58,830Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.333 -0.0003873 -0.0010028 1254 8.93 13.47 -20.80 2018-09-02 09:44:47.437264919 INFO 2020-11-12 15:34:58,835Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.341 -0.0001588 0.0007178 1600 11.08 -7.77 12.00 2018-09-02 09:55:52.641112089 INFO 2020-11-12 15:34:58,840Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.338 0.0004415 0.0002480 1468 10.01 -2.97 4.59 2018-09-02 10:05:53.703375101 INFO 2020-11-12 15:34:58,845Z lrauvNc4ToNetcdf.py nudge_coords():724 49: 0.347 -0.0003685 -0.0001077 1103 7.53 1.71 -2.65 2018-09-02 10:13:26.106935024 INFO 2020-11-12 15:34:58,850Z lrauvNc4ToNetcdf.py nudge_coords():724 50: 0.350 0.0013608 -0.0003073 1214 8.54 4.31 -6.67 2018-09-02 10:21:59.108901024 INFO 2020-11-12 15:34:58,855Z lrauvNc4ToNetcdf.py nudge_coords():724 51: 0.353 -0.0026768 0.0000705 985 6.99 -1.21 1.87 2018-09-02 10:28:58.865817070 INFO 2020-11-12 15:34:58,861Z lrauvNc4ToNetcdf.py nudge_coords():724 52: 0.347 -0.0000175 -0.0000300 276 2.27 1.59 -2.45 2018-09-02 10:31:15.404181004 INFO 2020-11-12 15:34:58,865Z lrauvNc4ToNetcdf.py nudge_coords():724 53: 0.339 0.0000680 -0.0000143 268 2.05 0.84 -1.29 2018-09-02 10:33:18.883308887 INFO 2020-11-12 15:34:58,870Z lrauvNc4ToNetcdf.py nudge_coords():724 54: 0.351 0.0000420 -0.0000863 802 6.62 1.56 -2.42 2018-09-02 10:39:56.643110991 INFO 2020-11-12 15:34:58,876Z lrauvNc4ToNetcdf.py nudge_coords():724 55: 0.337 -0.0014652 -0.0005838 3512 23.58 2.98 -4.59 2018-09-02 11:03:31.693351984 INFO 2020-11-12 15:34:58,881Z lrauvNc4ToNetcdf.py nudge_coords():724 56: 0.349 -0.0000283 0.0000190 96 0.67 -3.40 5.23 2018-09-02 11:04:12.525996923 INFO 2020-11-12 15:34:58,886Z lrauvNc4ToNetcdf.py nudge_coords():724 57: 0.349 -0.0009017 0.0000503 3736 26.84 -0.23 0.35 2018-09-02 11:31:03.473906994 INFO 2020-11-12 15:34:58,891Z lrauvNc4ToNetcdf.py nudge_coords():724 58: 0.337 -0.0002103 0.0001242 1001 7.36 -2.03 3.13 2018-09-02 11:38:25.287358999 INFO 2020-11-12 15:34:58,897Z lrauvNc4ToNetcdf.py nudge_coords():724 59: 0.346 -0.0000658 0.0000926 38 0.56 -19.92 30.66 2018-09-02 11:38:59.260504006 INFO 2020-11-12 15:34:58,901Z lrauvNc4ToNetcdf.py nudge_coords():724 60: 0.347 0.0000000 -0.0003145 827 5.89 6.44 -9.90 2018-09-02 11:44:52.790091991 INFO 2020-11-12 15:34:58,907Z lrauvNc4ToNetcdf.py nudge_coords():754 62: - - - 62 5.01 - - INFO 2020-11-12 15:34:58,907Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 103507 INFO 2020-11-12 15:34:58,933Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180901T223938/20180902T124953/data.csv INFO 2020-11-12 15:34:58,967Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:34:58,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:34:59,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180901T233927/201809012339_201809021149_2S_scieng.nc INFO 2020-11-12 15:34:59,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809012339_201809021149.nc4 INFO 2020-11-12 15:34:59,683Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T115008/201809021150_201809021203.nc4 file... INFO 2020-11-12 15:34:59,684Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809021150_201809021203.nc4 INFO 2020-11-12 15:35:00,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T115008/201809021150_201809021203.nc4 INFO 2020-11-12 15:35:00,879Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:00,956Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,032Z lrauvNc4ToNetcdf.py createSeries():241 depth : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,115Z lrauvNc4ToNetcdf.py createSeries():241 time : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,227Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,306Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,382Z lrauvNc4ToNetcdf.py createSeries():241 depth : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,469Z lrauvNc4ToNetcdf.py createSeries():241 time : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,557Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,633Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,739Z lrauvNc4ToNetcdf.py createSeries():241 depth : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,856Z lrauvNc4ToNetcdf.py createSeries():241 time : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:01,945Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,030Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,137Z lrauvNc4ToNetcdf.py createSeries():241 depth : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,236Z lrauvNc4ToNetcdf.py createSeries():241 time : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,331Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:35:02,346Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:35:02,349Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:35:02,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:35:02,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:35:02,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:35:02,359Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:35:02,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:02,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:35:02,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:35:02,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:35:02,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:35:02,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:35:02,423Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:35:02,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:35:02,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:35:02,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:35:02,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:35:02,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:35:02,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:35:02,473Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:35:02,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:35:02,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:35:02,494Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:35:02,495Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:02,517Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:02,538Z lrauvNc4ToNetcdf.py createSeries():241 depth : 99 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:02,584Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 98 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,654Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:02,680Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 98 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,748Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:02,771Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 98 v_t values found before 2018-09-02 11:50:00 and after 2018-09-02 12:03:00 INFO 2020-11-12 15:35:02,838Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:02,839Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T115008/201809021150_201809021203.nc4 INFO 2020-11-12 15:35:03,076Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:35:03,077Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:35:03,078Z lrauvNc4ToNetcdf.py nudge_coords():754 1: - - - 1115 8.27 - - INFO 2020-11-12 15:35:03,078Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 1115 INFO 2020-11-12 15:35:03,100Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180902T105020/20180902T130346/data.csv INFO 2020-11-12 15:35:03,131Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:35:03,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:35:03,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T115008/201809021150_201809021203_2S_scieng.nc INFO 2020-11-12 15:35:03,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809021150_201809021203.nc4 INFO 2020-11-12 15:35:05,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T120447/201809021204_201809022334.nc4 file... INFO 2020-11-12 15:35:05,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809021204_201809022334.nc4 INFO 2020-11-12 15:35:06,532Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T120447/201809021204_201809022334.nc4 INFO 2020-11-12 15:35:06,578Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:07,892Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:09,187Z lrauvNc4ToNetcdf.py createSeries():241 depth : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:10,459Z lrauvNc4ToNetcdf.py createSeries():241 time : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:11,752Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:13,002Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:14,264Z lrauvNc4ToNetcdf.py createSeries():241 depth : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:15,521Z lrauvNc4ToNetcdf.py createSeries():241 time : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:16,800Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:18,106Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:19,353Z lrauvNc4ToNetcdf.py createSeries():241 depth : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:20,615Z lrauvNc4ToNetcdf.py createSeries():241 time : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:21,857Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:23,112Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:24,348Z lrauvNc4ToNetcdf.py createSeries():241 depth : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:25,613Z lrauvNc4ToNetcdf.py createSeries():241 time : 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:26,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:35:27,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:35:28,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:35:28,658Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:35:28,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:35:28,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:35:28,924Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:30,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:35:31,275Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:32,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:35:33,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:35:34,769Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:35:34,899Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:35,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:35,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:35:35,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:35:35,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:35:35,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:35:35,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:35:35,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:35:35,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:35:35,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:35:35,980Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:35:37,025Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:35:37,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:37,043Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:38,274Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:38,285Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:39,519Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:39,528Z lrauvNc4ToNetcdf.py createSeries():241 depth : 44 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:40,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:40,831Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:42,119Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:42,166Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:43,407Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:43,473Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 43 v_t values found before 2018-09-02 12:04:00 and after 2018-09-02 23:34:00 INFO 2020-11-12 15:35:44,700Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:44,702Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T120447/201809021204_201809022334.nc4 INFO 2020-11-12 15:35:47,311Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:35:47,312Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:35:47,314Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.345 -0.0000058 0.0000035 46 0.30 -1.40 2.15 2018-09-02 12:06:23.211524963 INFO 2020-11-12 15:35:47,319Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.356 -0.0000740 0.0000123 148 1.28 -1.16 1.78 2018-09-02 12:07:40.504280089 INFO 2020-11-12 15:35:47,324Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.352 -0.0003118 -0.0001942 1176 8.20 2.86 -4.39 2018-09-02 12:15:52.745398045 INFO 2020-11-12 15:35:47,329Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.334 -0.0000195 0.0002872 894 6.52 -5.30 8.16 2018-09-02 12:22:24.569708109 INFO 2020-11-12 15:35:47,334Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.350 -0.0005428 -0.0002768 1167 8.44 3.96 -6.08 2018-09-02 12:30:51.150320053 INFO 2020-11-12 15:35:47,339Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.343 -0.0009033 -0.0002615 669 5.00 6.30 -9.69 2018-09-02 12:35:51.713665962 INFO 2020-11-12 15:35:47,344Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.348 0.0003145 0.0003213 550 4.50 -8.61 13.23 2018-09-02 12:40:22.156836987 INFO 2020-11-12 15:35:47,349Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.340 -0.0032329 0.0011670 3246 21.74 -6.46 9.95 2018-09-02 13:02:07.128715992 INFO 2020-11-12 15:35:47,355Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.344 -0.0003920 0.0000048 887 6.46 -0.09 0.14 2018-09-02 13:08:34.852588892 INFO 2020-11-12 15:35:47,360Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.329 -0.0032845 0.0012757 3218 21.56 -7.11 10.97 2018-09-02 13:30:08.670892 INFO 2020-11-12 15:35:47,365Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.343 0.0000377 0.0000127 152 1.26 -1.21 1.87 2018-09-02 13:31:24.389569044 INFO 2020-11-12 15:35:47,370Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.341 -0.0026762 0.0000558 3164 21.15 -0.32 0.49 2018-09-02 13:52:33.692955017 INFO 2020-11-12 15:35:47,375Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.345 -0.0001840 0.0001052 152 1.20 -10.53 16.21 2018-09-02 13:53:46.196793079 INFO 2020-11-12 15:35:47,380Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.354 -0.0021060 0.0001888 3142 20.95 -1.08 1.67 2018-09-02 14:14:43.689476967 INFO 2020-11-12 15:35:47,385Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.329 -0.0000595 -0.0000245 295 2.24 1.32 -2.03 2018-09-02 14:16:58.359006882 INFO 2020-11-12 15:35:47,390Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.333 -0.0032746 0.0004947 3304 22.03 -2.70 4.16 2018-09-02 14:39:00.672082901 INFO 2020-11-12 15:35:47,396Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.321 -0.0000462 0.0000430 219 1.69 -3.07 4.73 2018-09-02 14:40:42.247266054 INFO 2020-11-12 15:35:47,401Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.351 -0.0023656 0.0007885 3297 22.09 -4.29 6.61 2018-09-02 15:02:48.058142900 INFO 2020-11-12 15:35:47,406Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.336 0.0000767 0.0000958 460 3.53 -3.26 5.03 2018-09-02 15:06:20.320837021 INFO 2020-11-12 15:35:47,411Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.358 -0.0028297 0.0002343 3331 22.38 -1.26 1.94 2018-09-02 15:28:43.274213076 INFO 2020-11-12 15:35:47,417Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.346 0.0000987 -0.0000738 1478 10.61 0.84 -1.29 2018-09-02 15:39:20.286564112 INFO 2020-11-12 15:35:47,422Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.343 0.0003685 -0.0003808 551 4.25 10.79 -16.60 2018-09-02 15:43:35.741514921 INFO 2020-11-12 15:35:47,427Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.349 -0.0003767 0.0012403 5882 40.64 -3.67 5.66 2018-09-02 16:24:14.624367952 INFO 2020-11-12 15:35:47,433Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.328 -0.0000018 0.0002857 1246 9.07 -3.79 5.84 2018-09-02 16:33:19.226919889 INFO 2020-11-12 15:35:47,438Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.331 0.0006618 -0.0003367 629 4.90 8.26 -12.72 2018-09-02 16:38:13.780770063 INFO 2020-11-12 15:35:47,443Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.350 0.0012642 0.0005998 813 6.10 -11.81 18.21 2018-09-02 16:44:20.407478094 INFO 2020-11-12 15:35:47,448Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.340 -0.0016640 -0.0005433 3725 25.08 2.60 -4.01 2018-09-02 17:09:25.895744085 INFO 2020-11-12 15:35:47,454Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.350 -0.0000587 -0.0000633 494 3.96 1.92 -2.96 2018-09-02 17:13:24.129611969 INFO 2020-11-12 15:35:47,459Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.344 0.0000178 0.0000058 41 0.27 -2.64 4.06 2018-09-02 17:13:40.524463892 INFO 2020-11-12 15:35:47,463Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.344 0.0001162 0.0017453 1109 7.56 -27.72 42.80 2018-09-02 17:21:14.275701046 INFO 2020-11-12 15:35:47,468Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.353 0.0007602 -0.0013110 1269 9.05 17.42 -26.85 2018-09-02 17:30:17.556288004 INFO 2020-11-12 15:35:47,473Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.342 -0.0003305 -0.0004088 1410 9.79 5.02 -7.74 2018-09-02 17:40:05.562630892 INFO 2020-11-12 15:35:47,478Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.347 0.0004825 0.0000400 1111 7.80 -0.62 0.95 2018-09-02 17:47:54.077397108 INFO 2020-11-12 15:35:47,484Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.345 0.0006323 -0.0000620 1086 7.71 0.97 -1.49 2018-09-02 17:55:37.023603916 INFO 2020-11-12 15:35:47,489Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.360 0.0004978 0.0004870 412 3.08 -18.99 29.28 2018-09-02 17:58:42.351545095 INFO 2020-11-12 15:35:47,494Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.347 -0.0052816 0.0027769 4696 31.41 -10.75 16.38 2018-09-02 18:30:07.231671095 INFO 2020-11-12 15:35:47,499Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.324 0.0001255 -0.0000673 192 1.63 5.01 -7.63 2018-09-02 18:31:45.736023903 INFO 2020-11-12 15:35:47,504Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.324 -0.0066716 0.0015379 4703 31.35 -6.03 9.09 2018-09-02 19:03:07.324976921 INFO 2020-11-12 15:35:47,509Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.327 0.0002033 -0.0000793 403 3.27 2.99 -4.50 2018-09-02 19:06:23.789287090 INFO 2020-11-12 15:35:47,514Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.359 -0.0064192 0.0012406 4690 31.27 -4.94 7.35 2018-09-02 19:37:40.508620023 INFO 2020-11-12 15:35:47,519Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.336 0.0000577 -0.0000493 159 1.42 4.32 -6.43 2018-09-02 19:39:06.183892965 INFO 2020-11-12 15:35:47,524Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.353 0.0000521 0.0000713 586 3.95 -2.25 3.34 2018-09-02 19:43:03.876288891 INFO 2020-11-12 15:35:47,529Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.342 0.0007068 -0.0000983 1273 9.17 1.34 -1.99 2018-09-02 19:52:14.558535099 INFO 2020-11-12 15:35:47,534Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.349 0.0006513 -0.0000892 1055 7.46 1.49 -2.21 2018-09-02 19:59:42.548453093 INFO 2020-11-12 15:35:47,540Z lrauvNc4ToNetcdf.py nudge_coords():724 44: 0.347 0.0005442 0.0003187 1030 7.35 -5.40 8.03 2018-09-02 20:07:04.205395937 INFO 2020-11-12 15:35:47,545Z lrauvNc4ToNetcdf.py nudge_coords():724 45: 0.306 0.0004205 -0.0003448 694 5.07 8.46 -12.59 2018-09-02 20:12:09.047568083 INFO 2020-11-12 15:35:47,550Z lrauvNc4ToNetcdf.py nudge_coords():724 46: 0.316 0.0003018 0.0001347 490 3.88 -4.32 6.43 2018-09-02 20:16:02.135382891 INFO 2020-11-12 15:35:47,555Z lrauvNc4ToNetcdf.py nudge_coords():724 47: 0.337 -0.0020133 -0.0007159 3356 22.52 3.97 -5.89 2018-09-02 20:38:33.522825956 INFO 2020-11-12 15:35:47,560Z lrauvNc4ToNetcdf.py nudge_coords():724 48: 0.313 0.0001843 -0.0000388 238 2.09 2.32 -3.44 2018-09-02 20:40:39.295459986 INFO 2020-11-12 15:35:47,565Z lrauvNc4ToNetcdf.py nudge_coords():724 49: 0.350 -0.0020516 -0.0004698 3396 22.69 2.58 -3.84 2018-09-02 21:03:21.359613895 INFO 2020-11-12 15:35:47,570Z lrauvNc4ToNetcdf.py nudge_coords():724 50: 0.095 0.0002995 0.0000413 256 2.17 -2.38 3.54 2018-09-02 21:05:31.679750919 INFO 2020-11-12 15:35:47,575Z lrauvNc4ToNetcdf.py nudge_coords():724 51: 0.350 -0.0000113 0.0005846 685 4.57 -15.94 23.71 2018-09-02 21:10:06.022949934 INFO 2020-11-12 15:35:47,580Z lrauvNc4ToNetcdf.py nudge_coords():724 52: 0.351 0.0007853 -0.0003980 1175 8.27 6.00 -8.92 2018-09-02 21:18:22.770335913 INFO 2020-11-12 15:35:47,585Z lrauvNc4ToNetcdf.py nudge_coords():724 53: 0.337 0.0008350 -0.0000103 856 6.07 0.21 -0.32 2018-09-02 21:24:27.562706947 INFO 2020-11-12 15:35:47,591Z lrauvNc4ToNetcdf.py nudge_coords():724 54: 0.351 0.0013217 -0.0000868 932 6.70 1.62 -2.40 2018-09-02 21:31:09.661413908 INFO 2020-11-12 15:35:47,596Z lrauvNc4ToNetcdf.py nudge_coords():724 55: 0.349 0.0005462 -0.0001092 1138 8.10 1.68 -2.50 2018-09-02 21:39:15.860444069 INFO 2020-11-12 15:35:47,601Z lrauvNc4ToNetcdf.py nudge_coords():724 56: 0.342 -0.0122527 -0.0002743 13970 93.66 0.37 -0.54 2018-09-02 23:12:56.035573006 INFO 2020-11-12 15:35:47,608Z lrauvNc4ToNetcdf.py nudge_coords():724 57: 0.360 0.0001227 0.0001483 933 7.11 -2.61 3.87 2018-09-02 23:20:03.012356997 INFO 2020-11-12 15:35:47,613Z lrauvNc4ToNetcdf.py nudge_coords():724 58: 0.332 0.0000218 0.0000025 41 0.27 -1.17 1.74 2018-09-02 23:20:19.435204029 INFO 2020-11-12 15:35:47,618Z lrauvNc4ToNetcdf.py nudge_coords():754 60: - - - 1888 13.96 - - INFO 2020-11-12 15:35:47,618Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 99608 INFO 2020-11-12 15:35:47,645Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180902T110459/20180903T003417/data.csv INFO 2020-11-12 15:35:47,685Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:35:47,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:35:48,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T120447/201809021204_201809022334_2S_scieng.nc INFO 2020-11-12 15:35:48,431Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809021204_201809022334.nc4 INFO 2020-11-12 15:35:48,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233525/201809022335_201809022338.nc4 file... INFO 2020-11-12 15:35:48,565Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809022335_201809022338.nc4 INFO 2020-11-12 15:35:49,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233525/201809022335_201809022338.nc4 INFO 2020-11-12 15:35:49,786Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:49,889Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:49,983Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,090Z lrauvNc4ToNetcdf.py createSeries():241 time : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,194Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,286Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,377Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,480Z lrauvNc4ToNetcdf.py createSeries():241 time : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,575Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,678Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,764Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,870Z lrauvNc4ToNetcdf.py createSeries():241 time : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:50,989Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,095Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,197Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,266Z lrauvNc4ToNetcdf.py createSeries():241 time : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,347Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:35:51,357Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:35:51,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_salinity empty so skipping INFO 2020-11-12 15:35:51,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable sea_water_temperature empty so skipping INFO 2020-11-12 15:35:51,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:35:51,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:35:51,370Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:35:51,387Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:51,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:35:51,397Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:35:51,403Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:35:51,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:35:51,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-11-12 15:35:51,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:35:51,422Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:35:51,424Z lrauvNc4ToNetcdf.py createSeries():241 time_fix : 1 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:35:51,432Z lrauvNc4ToNetcdf.py createSeries():241 latitude_fix: 1 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:35:51,439Z lrauvNc4ToNetcdf.py createSeries():241 longitude_fix: 1 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,444Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:35:51,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:35:51,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:35:51,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:35:51,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:35:51,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:35:51,479Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-11-12 15:35:51,481Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:51,490Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:51,500Z lrauvNc4ToNetcdf.py createSeries():241 depth : 83 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:51,543Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 80 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,595Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:51,629Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 80 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,679Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:51,704Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 80 v_t values found before 2018-09-02 23:35:00 and after 2018-09-02 23:38:00 INFO 2020-11-12 15:35:51,754Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:51,755Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233525/201809022335_201809022338.nc4 INFO 2020-11-12 15:35:51,983Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:35:51,985Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:35:51,986Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.343 0.0001202 -0.0000722 168 1.26 7.16 -10.59 2018-09-02 23:38:17.834619999 INFO 2020-11-12 15:35:51,990Z lrauvNc4ToNetcdf.py nudge_coords():754 2: - - - 37 0.29 - - INFO 2020-11-12 15:35:51,990Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 205 INFO 2020-11-12 15:35:52,011Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180902T223537/20180903T003835/data.csv INFO 2020-11-12 15:35:52,049Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database WARNING 2020-11-12 15:35:52,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1174 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2020-11-12 15:35:52,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1175 Overwriting interpolated repeated values with time's index values INFO 2020-11-12 15:35:52,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:35:52,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233525/201809022335_201809022338_2S_scieng.nc INFO 2020-11-12 15:35:52,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809022335_201809022338.nc4 INFO 2020-11-12 15:35:52,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233835/201809022338_201809030051.nc4 file... INFO 2020-11-12 15:35:52,950Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809022338_201809030051.nc4 INFO 2020-11-12 15:35:54,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233835/201809022338_201809030051.nc4 INFO 2020-11-12 15:35:54,172Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:54,419Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:54,661Z lrauvNc4ToNetcdf.py createSeries():241 depth : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:54,915Z lrauvNc4ToNetcdf.py createSeries():241 time : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:55,163Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:55,400Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:55,599Z lrauvNc4ToNetcdf.py createSeries():241 depth : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:55,816Z lrauvNc4ToNetcdf.py createSeries():241 time : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:56,026Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:56,241Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:56,436Z lrauvNc4ToNetcdf.py createSeries():241 depth : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:56,628Z lrauvNc4ToNetcdf.py createSeries():241 time : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:56,825Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,015Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,214Z lrauvNc4ToNetcdf.py createSeries():241 depth : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,422Z lrauvNc4ToNetcdf.py createSeries():241 time : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:35:57,608Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_oxygen_in_sea_water: 55 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:35:57,663Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_salinity: 56 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:35:57,723Z lrauvNc4ToNetcdf.py createSeries():241 sea_water_temperature: 56 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:35:57,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-11-12 15:35:57,784Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-11-12 15:35:57,786Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:57,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:35:57,926Z lrauvNc4ToNetcdf.py createSeries():241 mass_concentration_of_chlorophyll_in_sea_water: 110 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:58,047Z lrauvNc4ToNetcdf.py createSeries():241 OutputChl: 110 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,161Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:35:58,164Z lrauvNc4ToNetcdf.py createSeries():241 Output470: 110 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,271Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:35:58,273Z lrauvNc4ToNetcdf.py createSeries():241 Output650: 110 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:35:58,382Z lrauvNc4ToNetcdf.py createSeries():241 bin_mean_mass_concentration_of_chlorophyll_in_sea_water: 11 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:58,399Z lrauvNc4ToNetcdf.py createSeries():241 bin_median_mass_concentration_of_chlorophyll_in_sea_water: 11 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:35:58,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_charge empty so skipping INFO 2020-11-12 15:35:58,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1097 Variable platform_battery_voltage empty so skipping INFO 2020-11-12 15:35:58,434Z lrauvNc4ToNetcdf.py createSeries():241 time_fix : 1 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:35:58,442Z lrauvNc4ToNetcdf.py createSeries():241 latitude_fix: 1 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,447Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:35:58,448Z lrauvNc4ToNetcdf.py createSeries():241 longitude_fix: 1 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:35:58,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:35:58,544Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:35:58,553Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:35:58,555Z lrauvNc4ToNetcdf.py createSeries():241 platform_rudder_angle: 49 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,607Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:35:58,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:35:58,780Z lrauvNc4ToNetcdf.py createSeries():241 fix_residual_percent_distance_traveled: 1 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:58,787Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:58,923Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:58,925Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:59,060Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:59,062Z lrauvNc4ToNetcdf.py createSeries():241 depth : 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:59,203Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:35:59,242Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:59,437Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:59,476Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:59,690Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:59,724Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 143 v_t values found before 2018-09-02 23:38:00 and after 2018-09-03 00:51:00 INFO 2020-11-12 15:35:59,953Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:35:59,954Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233835/201809022338_201809030051.nc4 INFO 2020-11-12 15:36:00,485Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:36:00,487Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:36:00,488Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.358 0.0004813 -0.0003457 577 5.00 8.66 -12.81 2018-09-02 23:46:33.554490089 INFO 2020-11-12 15:36:00,493Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.240 0.0010857 0.0017912 4701 31.66 -7.09 10.48 2018-09-03 00:18:13.338156939 INFO 2020-11-12 15:36:00,500Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.321 -0.0000067 0.0000355 71 0.98 -4.52 6.68 2018-09-03 00:19:12.759028912 INFO 2020-11-12 15:36:00,504Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.328 0.0003229 0.0023304 4864 32.67 -8.95 13.22 2018-09-03 00:51:53.288009882 INFO 2020-11-12 15:36:00,509Z lrauvNc4ToNetcdf.py nudge_coords():754 5: - - - 9 0.06 - - INFO 2020-11-12 15:36:00,509Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 10222 INFO 2020-11-12 15:36:00,534Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180902T223836/20180903T015157/data.csv INFO 2020-11-12 15:36:00,566Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:36:00,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:36:01,219Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180902T233835/201809022338_201809030051_2S_scieng.nc INFO 2020-11-12 15:36:01,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809022338_201809030051.nc4 INFO 2020-11-12 15:36:03,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T005259/201809030053_201809031318.nc4 file... INFO 2020-11-12 15:36:03,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809030053_201809031318.nc4 INFO 2020-11-12 15:36:04,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T005259/201809030053_201809031318.nc4 INFO 2020-11-12 15:36:04,882Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:06,348Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:07,757Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:09,156Z lrauvNc4ToNetcdf.py createSeries():241 time : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:10,551Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:11,971Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:13,338Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:14,685Z lrauvNc4ToNetcdf.py createSeries():241 time : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:16,067Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:17,487Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:18,876Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:20,346Z lrauvNc4ToNetcdf.py createSeries():241 time : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:21,701Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:23,265Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:24,721Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:26,144Z lrauvNc4ToNetcdf.py createSeries():241 time : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:27,487Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:36:28,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:36:29,034Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:36:29,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:36:30,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:36:30,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:36:30,237Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:31,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:36:33,256Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:36:34,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:36:36,276Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:36:37,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:36:37,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:36:38,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:36:38,115Z lrauvNc4ToNetcdf.py createSeries():241 platform_battery_charge: 1 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:38,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:36:38,140Z lrauvNc4ToNetcdf.py createSeries():241 platform_battery_voltage: 1 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:38,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:36:38,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:36:38,173Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:36:38,181Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:36:38,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:36:38,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:36:38,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:36:39,499Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:36:41,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:36:41,149Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:36:41,158Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:42,501Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:36:42,511Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:43,839Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:36:43,849Z lrauvNc4ToNetcdf.py createSeries():241 depth : 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:45,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:36:45,258Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:46,626Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:36:46,675Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:48,001Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:36:48,050Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 23 v_t values found before 2018-09-03 00:53:00 and after 2018-09-03 13:18:00 INFO 2020-11-12 15:36:49,392Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:36:49,394Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T005259/201809030053_201809031318.nc4 INFO 2020-11-12 15:36:52,223Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:36:52,224Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:36:52,226Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.338 -0.0000077 -0.0000145 34 0.22 8.28 -12.22 2018-09-03 00:54:35.686665058 INFO 2020-11-12 15:36:52,231Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.352 -0.0000003 -0.0000408 168 1.26 4.06 -5.99 2018-09-03 00:55:51.889302015 INFO 2020-11-12 15:36:52,236Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.347 0.0000735 -0.0001992 1126 8.43 2.97 -4.38 2018-09-03 01:04:17.801474094 INFO 2020-11-12 15:36:52,241Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.337 0.0000253 -0.0000370 1076 8.07 0.58 -0.85 2018-09-03 01:12:22.677758932 INFO 2020-11-12 15:36:52,246Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.351 0.0001067 -0.0001072 667 5.02 2.68 -3.96 2018-09-03 01:17:24.272526026 INFO 2020-11-12 15:36:52,251Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 0.344 0.0000142 -0.0000218 311 2.60 1.06 -1.56 2018-09-03 01:20:00.600617886 INFO 2020-11-12 15:36:52,256Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 0.348 0.0005223 0.0025394 4619 31.02 -10.28 15.17 2018-09-03 01:51:02.424300909 INFO 2020-11-12 15:36:52,261Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.345 -0.0001467 -0.0001397 486 3.98 4.41 -6.51 2018-09-03 01:55:01.364639044 INFO 2020-11-12 15:36:52,266Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 0.356 0.0001807 0.0028849 4636 31.37 -11.58 17.04 2018-09-03 02:26:23.992404938 INFO 2020-11-12 15:36:52,271Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 0.360 -0.0000703 -0.0000520 423 3.61 1.81 -2.67 2018-09-03 02:30:01.271373034 INFO 2020-11-12 15:36:52,276Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 0.352 -0.0098999 0.0027724 13101 87.81 -3.99 5.85 2018-09-03 03:57:50.180259943 INFO 2020-11-12 15:36:52,282Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 0.348 0.0001576 -0.0000877 1120 8.55 1.29 -1.90 2018-09-03 04:06:23.767584085 INFO 2020-11-12 15:36:52,287Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 0.355 -0.0000082 0.0000812 436 3.57 -2.87 4.21 2018-09-03 04:09:58.386559963 INFO 2020-11-12 15:36:52,292Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 0.325 -0.0046219 -0.0009487 4633 31.04 3.82 -5.66 2018-09-03 04:41:01.123210907 INFO 2020-11-12 15:36:52,297Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 0.323 -0.0001202 -0.0002870 290 2.55 14.08 -20.87 2018-09-03 04:43:34.389069080 INFO 2020-11-12 15:36:52,302Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.347 -0.0012538 -0.0018963 5068 33.88 6.94 -10.37 2018-09-03 05:17:27.349703074 INFO 2020-11-12 15:36:52,307Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.343 -0.0000082 0.0000262 119 1.14 -2.85 4.27 2018-09-03 05:18:35.938735008 INFO 2020-11-12 15:36:52,312Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.350 -0.0006096 -0.0011185 4837 32.47 4.24 -6.38 2018-09-03 05:51:04.411510944 INFO 2020-11-12 15:36:52,317Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.333 -0.0000135 0.0000782 547 4.10 -2.34 3.53 2018-09-03 05:55:11.107929945 INFO 2020-11-12 15:36:52,322Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.346 -0.0003962 -0.0009048 4975 33.17 3.33 -5.05 2018-09-03 06:28:21.789042950 INFO 2020-11-12 15:36:52,327Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.350 -0.0000002 0.0000105 137 1.21 -1.05 1.60 2018-09-03 06:29:35.097098112 INFO 2020-11-12 15:36:52,332Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.341 -0.0001558 -0.0009029 5288 35.69 3.06 -4.69 2018-09-03 07:05:17.106878996 INFO 2020-11-12 15:36:52,338Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.336 0.0000077 0.0000173 30 0.44 -4.77 7.30 2018-09-03 07:05:43.889811993 INFO 2020-11-12 15:36:52,342Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.342 0.0002633 -0.0005875 5450 36.77 1.92 -2.96 2018-09-03 07:42:30.694650888 INFO 2020-11-12 15:36:52,348Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.328 -0.0000007 0.0000107 32 0.45 -2.82 4.36 2018-09-03 07:42:58.328130007 INFO 2020-11-12 15:36:52,353Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.342 0.0005846 -0.0005873 5182 34.78 2.01 -3.13 2018-09-03 08:17:45.375694036 INFO 2020-11-12 15:36:52,358Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.332 0.0000120 -0.0000015 30 0.55 0.33 -0.51 2018-09-03 08:18:18.624872923 INFO 2020-11-12 15:36:52,363Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.348 0.0004307 -0.0006168 5328 35.79 2.04 -3.19 2018-09-03 08:54:06.694638968 INFO 2020-11-12 15:36:52,368Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.335 -0.0000070 0.0000063 37 0.53 -1.41 2.22 2018-09-03 08:54:38.894332886 INFO 2020-11-12 15:36:52,373Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.354 0.0000944 -0.0004132 5327 35.66 1.36 -2.15 2018-09-03 09:30:18.656388998 INFO 2020-11-12 15:36:52,378Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.319 -0.0000003 0.0000125 33 0.50 -2.92 4.62 2018-09-03 09:30:49.185128927 INFO 2020-11-12 15:36:52,383Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.321 0.0006224 -0.0009974 5316 35.70 3.25 -5.18 2018-09-03 10:06:31.812299967 INFO 2020-11-12 15:36:52,388Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.349 0.0000142 0.0000075 32 0.48 -1.82 2.90 2018-09-03 10:07:01.058895111 INFO 2020-11-12 15:36:52,393Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.343 0.0008020 -0.0010691 5290 35.62 3.46 -5.56 2018-09-03 10:42:38.446808100 INFO 2020-11-12 15:36:52,398Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.338 -0.0000013 0.0000008 30 0.44 -0.22 0.35 2018-09-03 10:43:05.154954910 INFO 2020-11-12 15:36:52,403Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.344 0.0004787 -0.0006718 5326 35.80 2.15 -3.48 2018-09-03 11:18:53.625962019 INFO 2020-11-12 15:36:52,408Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.319 -0.0000430 0.0000480 30 0.48 -11.45 18.55 2018-09-03 11:19:22.838500023 INFO 2020-11-12 15:36:52,413Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.338 0.0015769 -0.0008698 5306 35.76 2.76 -4.51 2018-09-03 11:55:08.866583109 INFO 2020-11-12 15:36:52,419Z lrauvNc4ToNetcdf.py nudge_coords():724 38: 0.333 0.0001929 0.0002808 1498 10.75 -2.96 4.84 2018-09-03 12:05:54.000062943 INFO 2020-11-12 15:36:52,425Z lrauvNc4ToNetcdf.py nudge_coords():724 39: 0.347 0.0001388 0.0002740 812 6.20 -5.01 8.19 2018-09-03 12:12:06.447597980 INFO 2020-11-12 15:36:52,430Z lrauvNc4ToNetcdf.py nudge_coords():724 40: 0.336 0.0013354 0.0003108 5295 35.48 -0.98 1.62 2018-09-03 12:47:35.800388098 INFO 2020-11-12 15:36:52,436Z lrauvNc4ToNetcdf.py nudge_coords():724 41: 0.353 0.0000043 0.0000227 31 0.45 -5.68 9.37 2018-09-03 12:48:03.099916935 INFO 2020-11-12 15:36:52,441Z lrauvNc4ToNetcdf.py nudge_coords():724 42: 0.348 -0.0000393 0.0005575 2431 16.46 -3.79 6.28 2018-09-03 13:04:31.103640079 INFO 2020-11-12 15:36:52,447Z lrauvNc4ToNetcdf.py nudge_coords():724 43: 0.346 0.0000485 0.0001035 803 6.12 -1.89 3.13 2018-09-03 13:10:38.902527094 INFO 2020-11-12 15:36:52,453Z lrauvNc4ToNetcdf.py nudge_coords():754 45: - - - 1057 7.58 - - INFO 2020-11-12 15:36:52,453Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 108803 INFO 2020-11-12 15:36:52,482Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180902T235311/20180903T141813/data.csv INFO 2020-11-12 15:36:52,526Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:36:52,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:36:53,413Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T005259/201809030053_201809031318_2S_scieng.nc INFO 2020-11-12 15:36:53,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809030053_201809031318.nc4 INFO 2020-11-12 15:36:54,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1043 Reading /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T131817/201809031318_201809031853.nc4 file... INFO 2020-11-12 15:36:54,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 After copying to /tmp/201809031318_201809031853.nc4 INFO 2020-11-12 15:36:55,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1046 Read file /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T131817/201809031318_201809031853.nc4 INFO 2020-11-12 15:36:55,630Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:56,265Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:56,894Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:57,523Z lrauvNc4ToNetcdf.py createSeries():241 time : 27 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:58,164Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:58,785Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:36:59,438Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:00,102Z lrauvNc4ToNetcdf.py createSeries():241 time : 27 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:00,743Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:01,364Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:01,989Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:02,640Z lrauvNc4ToNetcdf.py createSeries():241 time : 27 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:03,274Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:03,918Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:04,593Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:05,241Z lrauvNc4ToNetcdf.py createSeries():241 time : 27 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:05,865Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Creating t variable of the time indexes INFO 2020-11-12 15:37:06,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-11-12 15:37:06,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity INFO 2020-11-12 15:37:06,749Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature INFO 2020-11-12 15:37:06,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-11-12 15:37:06,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group CTD_Seabird parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-11-12 15:37:06,886Z lrauvNc4ToNetcdf.py createSeries():241 downwelling_photosynthetic_photon_flux_in_sea_water: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:07,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-11-12 15:37:08,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:37:08,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter OutputChl renaming to chl INFO 2020-11-12 15:37:09,286Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-11-12 15:37:09,881Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-11-12 15:37:09,949Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:37:10,017Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-11-12 15:37:10,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-11-12 15:37:10,059Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-11-12 15:37:10,061Z lrauvNc4ToNetcdf.py createSeries():241 time_fix : 1 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:10,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-11-12 15:37:10,070Z lrauvNc4ToNetcdf.py createSeries():241 latitude_fix: 1 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:10,078Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-11-12 15:37:10,080Z lrauvNc4ToNetcdf.py createSeries():241 longitude_fix: 1 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:10,087Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-11-12 15:37:10,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-11-12 15:37:10,283Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-11-12 15:37:10,295Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-11-12 15:37:10,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-11-12 15:37:11,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-11-12 15:37:11,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:37:11,349Z lrauvNc4ToNetcdf.py createSeries():241 longitude: 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:11,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:37:11,938Z lrauvNc4ToNetcdf.py createSeries():241 latitude : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:12,534Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:37:12,539Z lrauvNc4ToNetcdf.py createSeries():241 depth : 26 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:13,163Z lrauvNc4ToNetcdf.py processResampleNc4File():1134 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-11-12 15:37:13,226Z lrauvNc4ToNetcdf.py createSeries():241 platform_pitch_angle: 22 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:13,869Z lrauvNc4ToNetcdf.py createNav():506 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:37:13,914Z lrauvNc4ToNetcdf.py createSeries():241 platform_roll_angle: 22 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:14,553Z lrauvNc4ToNetcdf.py createNav():506 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:37:14,588Z lrauvNc4ToNetcdf.py createSeries():241 platform_orientation: 22 v_t values found before 2018-09-03 13:18:00 and after 2018-09-03 18:53:00 INFO 2020-11-12 15:37:15,202Z lrauvNc4ToNetcdf.py createNav():506 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-11-12 15:37:15,203Z lrauvNc4ToNetcdf.py nudge_coords():651 /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T131817/201809031318_201809031853.nc4 INFO 2020-11-12 15:37:16,545Z lrauvNc4ToNetcdf.py nudge_coords():674 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-11-12 15:37:16,547Z lrauvNc4ToNetcdf.py nudge_coords():691 - - - 0 0.00 - - - INFO 2020-11-12 15:37:16,548Z lrauvNc4ToNetcdf.py nudge_coords():724 0: 0.325 0.0003122 0.0003813 1538 11.58 -3.68 6.10 2018-09-03 13:35:45.009027958 INFO 2020-11-12 15:37:16,554Z lrauvNc4ToNetcdf.py nudge_coords():724 1: 0.348 0.0000013 0.0000037 6 0.12 -3.56 5.90 2018-09-03 13:35:52.337872028 INFO 2020-11-12 15:37:16,558Z lrauvNc4ToNetcdf.py nudge_coords():724 2: 0.345 0.0000047 0.0000005 7 0.08 -0.69 1.14 2018-09-03 13:35:57.608473063 INFO 2020-11-12 15:37:16,562Z lrauvNc4ToNetcdf.py nudge_coords():724 3: 0.347 0.0000042 0.0000010 6 0.10 -1.12 1.85 2018-09-03 13:36:04.007445097 INFO 2020-11-12 15:37:16,567Z lrauvNc4ToNetcdf.py nudge_coords():724 4: 0.332 0.0000005 0.0000000 6 0.07 -0.00 0.00 2018-09-03 13:36:08.833391905 INFO 2020-11-12 15:37:16,571Z lrauvNc4ToNetcdf.py nudge_coords():724 5: 3.101 -0.0000008 0.0000040 6 0.05 -8.21 13.60 2018-09-03 13:36:12.488070011 INFO 2020-11-12 15:37:16,576Z lrauvNc4ToNetcdf.py nudge_coords():724 6: 3.035 0.0000075 -0.0000005 6 0.03 1.83 -3.02 2018-09-03 13:36:17.477417946 INFO 2020-11-12 15:37:16,580Z lrauvNc4ToNetcdf.py nudge_coords():724 7: 0.308 0.0000018 0.0000028 7 0.06 -5.48 9.07 2018-09-03 13:36:24.020082951 INFO 2020-11-12 15:37:16,585Z lrauvNc4ToNetcdf.py nudge_coords():724 8: 3.021 -0.0000027 0.0000062 8 0.09 -7.84 12.99 2018-09-03 13:36:29.643642902 INFO 2020-11-12 15:37:16,589Z lrauvNc4ToNetcdf.py nudge_coords():724 9: 1.687 0.0000050 0.0000000 6 0.06 -0.00 0.00 2018-09-03 13:36:36.027509928 INFO 2020-11-12 15:37:16,594Z lrauvNc4ToNetcdf.py nudge_coords():724 10: 1.783 0.0000085 0.0000063 5 0.16 -4.35 7.21 2018-09-03 13:36:47.541363001 INFO 2020-11-12 15:37:16,598Z lrauvNc4ToNetcdf.py nudge_coords():724 11: 1.786 0.0000027 0.0000040 5 0.16 -2.77 4.58 2018-09-03 13:36:59.065180063 INFO 2020-11-12 15:37:16,603Z lrauvNc4ToNetcdf.py nudge_coords():724 12: 1.693 0.0000107 0.0000030 5 0.16 -2.04 3.38 2018-09-03 13:37:10.748671055 INFO 2020-11-12 15:37:16,607Z lrauvNc4ToNetcdf.py nudge_coords():724 13: 1.776 0.0000047 0.0000085 5 0.22 -4.38 7.26 2018-09-03 13:37:25.519973040 INFO 2020-11-12 15:37:16,612Z lrauvNc4ToNetcdf.py nudge_coords():724 14: 4.577 0.0000080 0.0000022 5 0.12 -2.05 3.40 2018-09-03 13:37:34.439219952 INFO 2020-11-12 15:37:16,616Z lrauvNc4ToNetcdf.py nudge_coords():724 15: 0.352 0.0003488 0.0005125 2547 18.02 -3.18 5.27 2018-09-03 13:55:40.061199903 INFO 2020-11-12 15:37:16,621Z lrauvNc4ToNetcdf.py nudge_coords():724 16: 0.321 0.0006332 0.0002755 1060 7.67 -4.01 6.65 2018-09-03 14:03:20.964471102 INFO 2020-11-12 15:37:16,626Z lrauvNc4ToNetcdf.py nudge_coords():724 17: 0.337 0.0002768 0.0002210 813 6.29 -3.92 6.51 2018-09-03 14:09:38.732428074 INFO 2020-11-12 15:37:16,631Z lrauvNc4ToNetcdf.py nudge_coords():724 18: 0.342 0.0003182 0.0003458 1320 9.57 -4.03 6.69 2018-09-03 14:19:13.511363982 INFO 2020-11-12 15:37:16,636Z lrauvNc4ToNetcdf.py nudge_coords():724 19: 0.355 0.0001000 0.0001795 642 5.18 -3.87 6.42 2018-09-03 14:24:24.847254992 INFO 2020-11-12 15:37:16,640Z lrauvNc4ToNetcdf.py nudge_coords():724 20: 0.328 0.0016416 -0.0005153 6872 46.23 1.23 -2.07 2018-09-03 15:10:39.333096027 INFO 2020-11-12 15:37:16,646Z lrauvNc4ToNetcdf.py nudge_coords():724 21: 0.346 0.0003893 -0.0007242 477 4.10 19.45 -32.75 2018-09-03 15:14:45.598439932 INFO 2020-11-12 15:37:16,650Z lrauvNc4ToNetcdf.py nudge_coords():724 22: 0.317 0.0011351 -0.0010115 6850 46.07 2.38 -4.07 2018-09-03 16:00:50.176114082 INFO 2020-11-12 15:37:16,656Z lrauvNc4ToNetcdf.py nudge_coords():724 23: 0.325 -0.0000167 0.0000390 33 0.52 -8.10 13.84 2018-09-03 16:01:21.884876013 INFO 2020-11-12 15:37:16,660Z lrauvNc4ToNetcdf.py nudge_coords():724 24: 0.327 0.0063595 -0.0034168 6651 46.62 7.86 -13.58 2018-09-03 16:47:59.221786976 INFO 2020-11-12 15:37:16,666Z lrauvNc4ToNetcdf.py nudge_coords():724 25: 0.348 0.0002150 0.0003365 408 3.20 -11.28 19.51 2018-09-03 16:51:11.333513021 INFO 2020-11-12 15:37:16,670Z lrauvNc4ToNetcdf.py nudge_coords():724 26: 0.343 0.0008717 -0.0028353 7021 47.30 6.35 -11.11 2018-09-03 17:38:29.656841993 INFO 2020-11-12 15:37:16,675Z lrauvNc4ToNetcdf.py nudge_coords():724 27: 0.347 0.0001027 0.0000155 222 2.14 -0.77 1.34 2018-09-03 17:40:38.450371981 INFO 2020-11-12 15:37:16,680Z lrauvNc4ToNetcdf.py nudge_coords():724 28: 0.348 -0.0001296 -0.0002947 783 5.73 5.44 -9.53 2018-09-03 17:46:22.656039953 INFO 2020-11-12 15:37:16,687Z lrauvNc4ToNetcdf.py nudge_coords():724 29: 0.332 0.0001997 -0.0000052 247 2.16 0.25 -0.44 2018-09-03 17:48:32.781259060 INFO 2020-11-12 15:37:16,692Z lrauvNc4ToNetcdf.py nudge_coords():724 30: 0.365 0.0018688 -0.0014854 2482 17.40 8.99 -15.82 2018-09-03 18:05:57.316575050 INFO 2020-11-12 15:37:16,697Z lrauvNc4ToNetcdf.py nudge_coords():724 31: 0.321 -0.0000152 -0.0000133 28 0.47 2.98 -5.25 2018-09-03 18:06:26.011990070 INFO 2020-11-12 15:37:16,701Z lrauvNc4ToNetcdf.py nudge_coords():724 32: 0.347 0.0022320 -0.0015181 2298 15.94 10.00 -17.65 2018-09-03 18:22:22.615351915 INFO 2020-11-12 15:37:16,706Z lrauvNc4ToNetcdf.py nudge_coords():724 33: 0.284 0.0004880 -0.0000060 43 0.63 1.00 -1.77 2018-09-03 18:23:00.744273901 INFO 2020-11-12 15:37:16,711Z lrauvNc4ToNetcdf.py nudge_coords():724 34: 0.349 0.0011125 -0.0009319 1192 8.38 11.67 -20.61 2018-09-03 18:31:23.713305950 INFO 2020-11-12 15:37:16,716Z lrauvNc4ToNetcdf.py nudge_coords():724 35: 0.354 0.0000500 0.0000877 944 6.98 -1.32 2.33 2018-09-03 18:38:23.075227976 INFO 2020-11-12 15:37:16,720Z lrauvNc4ToNetcdf.py nudge_coords():724 36: 0.350 0.0003475 -0.0004600 1162 8.30 5.82 -10.27 2018-09-03 18:46:41.372209072 INFO 2020-11-12 15:37:16,725Z lrauvNc4ToNetcdf.py nudge_coords():724 37: 0.341 0.0016872 0.0008687 900 6.40 -14.22 25.14 2018-09-03 18:53:05.960393906 INFO 2020-11-12 15:37:16,730Z lrauvNc4ToNetcdf.py nudge_coords():754 39: - - - 11 0.18 - - INFO 2020-11-12 15:37:16,730Z lrauvNc4ToNetcdf.py nudge_coords():758 Points in final series = 46627 INFO 2020-11-12 15:37:16,758Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():550 http://odss.mbari.org/trackingdb/position/makai_ac/between/20180903T121829/20180903T195317/data.csv INFO 2020-11-12 15:37:16,813Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():573 Found 0 position values from the Tracking database INFO 2020-11-12 15:37:16,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1190 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'chl', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-11-12 15:37:17,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1193 Wrote /mbari/LRAUV/makai/missionlogs/2018/20180828_20180903/20180903T131817/201809031318_201809031853_2S_scieng.nc INFO 2020-11-12 15:37:17,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1196 Removing /tmp/201809031318_201809031853.nc4