INFO 2019-01-01 21:18:30,291Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4 file...
INFO 2019-01-01 21:18:42,706Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-01 21:18:43,657Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-01 21:18:44,612Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
INFO 2019-01-01 21:18:44,844Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_Seabird parameter sea_water_salinity renaming to salinity
INFO 2019-01-01 21:18:45,074Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_Seabird parameter sea_water_temperature renaming to temperature
WARNING 2019-01-01 21:18:45,074Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4
INFO 2019-01-01 21:18:45,800Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-01 21:18:47,850Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-01 21:18:49,809Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-01 21:18:51,798Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
WARNING 2019-01-01 21:18:51,799Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_battery_charge' not in /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4
WARNING 2019-01-01 21:18:51,799Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_battery_voltage' not in /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4
INFO 2019-01-01 21:18:51,807Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-01 21:18:51,840Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-01 21:18:51,865Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-01-01 21:18:51,865Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_average_current' not in /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4
INFO 2019-01-01 21:18:51,999Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-01 21:18:52,026Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-01 21:18:52,051Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-01 21:18:52,175Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-01 21:18:52,344Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-01 21:18:52,351Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 21:18:53,059Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 21:18:53,806Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 21:18:54,470Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-01 21:18:54,475Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 21:18:55,118Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 21:18:55,809Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 21:18:56,427Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-01 21:18:57,059Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 21:18:57,751Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 21:18:58,388Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-01 21:18:58,390Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4
INFO 2019-01-01 21:18:58,467Z lrauvNc4ToNetcdf.py var_series():523 Removing bad longitude times from /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4 ([index], [values]): [2922], ['2831-12-10 03:34:46.425312']
INFO 2019-01-01 21:18:58,844Z lrauvNc4ToNetcdf.py var_series():523 Removing bad latitude times from /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001.nc4 ([index], [values]): [2922], ['2831-12-10 03:34:46.425312']
INFO 2019-01-01 21:18:59,205Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-01 21:18:59,206Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -       961    7.04              -              -
WARNING 2019-01-01 21:18:59,208Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.342602014) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,212Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.343    0.0003418    0.0003912      1393    9.84           4.52           7.36
WARNING 2019-01-01 21:18:59,215Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338268042) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,216Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.338    0.0001757    0.0001607       859    6.51           2.81           4.57
WARNING 2019-01-01 21:18:59,219Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.345738888) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,220Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.346    0.0001715    0.0001818       707    5.30           3.90           6.35
WARNING 2019-01-01 21:18:59,223Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.32760191) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,224Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.328    0.0010684    0.0013112      5178   34.55           4.31           7.03
WARNING 2019-01-01 21:18:59,227Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.322755098) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,228Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.323   -0.0000938    0.0001350       399    3.01           5.09           8.30
WARNING 2019-01-01 21:18:59,231Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.315823079) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,232Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.316    0.0002831   -0.0000925       465    3.11          -3.39          -5.52
WARNING 2019-01-01 21:18:59,235Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.347150086) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,235Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.347   -0.0000472    0.0000975       506    3.64           3.04           4.96
WARNING 2019-01-01 21:18:59,239Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346673011) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,240Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.347    0.0035616    0.0048846     18288  122.10           4.57           7.41
WARNING 2019-01-01 21:18:59,244Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.336436986) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,245Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.336   -0.0000325    0.0005155      1245    8.82           6.68          10.83
WARNING 2019-01-01 21:18:59,248Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.364154816) < max_sec_diff_at_end (10)
INFO 2019-01-01 21:18:59,249Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.364    0.0000353    0.0002263       876    6.26           4.13           6.70
INFO 2019-01-01 21:18:59,253Z lrauvNc4ToNetcdf.py nudge_coords():613   11:            -            -            -       783    5.69              -              -
INFO 2019-01-01 21:18:59,253Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 30699
INFO 2019-01-01 21:18:59,269Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/makai_ac/between/20171128T152508/20171128T210106/data.csv
INFO 2019-01-01 21:18:59,315Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-01 21:18:59,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-01 21:18:59,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/makai/missionlogs/2017/20171127_20171130/20171128T162508/201711281625_201711282001_2S_scieng.nc