INFO 2020-07-30 06:48:17,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/makai/missionlogs/2014/20140929_20141010/20140929T220101/201409292201_201409300220.nc4 file... INFO 2020-07-30 06:48:17,940Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201409292201_201409300220.nc4 INFO 2020-07-30 06:48:19,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/makai/missionlogs/2014/20140929_20141010/20140929T220101/201409292201_201409300220.nc4 INFO 2020-07-30 06:48:19,333Z lrauvNc4ToNetcdf.py createSeries():240 depth : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:19,717Z lrauvNc4ToNetcdf.py createSeries():240 time : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:20,314Z lrauvNc4ToNetcdf.py createSeries():240 depth : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:20,696Z lrauvNc4ToNetcdf.py createSeries():240 time : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:21,314Z lrauvNc4ToNetcdf.py createSeries():240 depth : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:21,694Z lrauvNc4ToNetcdf.py createSeries():240 time : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:22,298Z lrauvNc4ToNetcdf.py createSeries():240 depth : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:22,674Z lrauvNc4ToNetcdf.py createSeries():240 time : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 WARNING 2020-07-30 06:48:23,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from latitude repeated/decreasing values at indices: [3636] WARNING 2020-07-30 06:48:23,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from longitude repeated/decreasing values at indices: [3636] WARNING 2020-07-30 06:48:23,039Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from depth repeated/decreasing values at indices: [ 304 305 306 307 441 14097 19383 19694 21583 23890 23891] WARNING 2020-07-30 06:48:23,043Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from time repeated/decreasing values at indices: [ 302 303 304 305 439 14095 19381 19692 21581 23888 23889] INFO 2020-07-30 06:48:23,046Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-30 06:48:23,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:23,072Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:23,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:23,415Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:23,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:23,756Z lrauvNc4ToNetcdf.py createSeries():240 depth : 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:24,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:24,101Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-30 06:48:24,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2020-07-30 06:48:24,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature INFO 2020-07-30 06:48:24,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-30 06:48:24,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-30 06:48:24,399Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-30 06:48:24,415Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-07-30 06:48:24,430Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-07-30 06:48:24,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-07-30 06:48:24,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-07-30 06:48:24,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-07-30 06:48:24,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-07-30 06:48:24,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-07-30 06:48:24,593Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-30 06:48:24,616Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-30 06:48:24,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-30 06:48:24,978Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-30 06:48:25,004Z lrauvNc4ToNetcdf.py createSeries():240 platform_pitch_angle: 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:25,388Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:25,419Z lrauvNc4ToNetcdf.py createSeries():240 platform_roll_angle: 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:25,862Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'arcdeg', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:25,888Z lrauvNc4ToNetcdf.py createSeries():240 platform_orientation: 30 v_t values found before 2014-09-29 22:01:00 and after 2014-09-30 02:20:00 INFO 2020-07-30 06:48:26,265Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:26,265Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/makai/missionlogs/2014/20140929_20141010/20140929T220101/201409292201_201409300220.nc4 INFO 2020-07-30 06:48:26,552Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-07-30 06:48:26,554Z lrauvNc4ToNetcdf.py nudge_coords():660 - - - 1 0.00 - - - INFO 2020-07-30 06:48:26,556Z lrauvNc4ToNetcdf.py nudge_coords():686 0: 0.514 0.0000000 0.0000000 1 0.00 nan nan 2014-09-29 22:04:41.011264086 INFO 2020-07-30 06:48:26,561Z lrauvNc4ToNetcdf.py nudge_coords():686 1: 0.391 -0.0003862 -0.0012674 237 1.68 -88.23 -139.61 2014-09-29 22:27:01.339823961 INFO 2020-07-30 06:48:26,566Z lrauvNc4ToNetcdf.py nudge_coords():686 2: 0.014 0.0000000 0.0000000 689 13.53 0.00 0.00 2014-09-29 22:40:34.010240078 INFO 2020-07-30 06:48:26,571Z lrauvNc4ToNetcdf.py nudge_coords():686 3: 0.081 0.0000000 0.0000000 957 8.55 0.00 0.00 2014-09-29 23:45:32.052223921 INFO 2020-07-30 06:48:26,576Z lrauvNc4ToNetcdf.py nudge_coords():686 5: 0.201 0.0000000 0.0000000 2 8.52 0.00 0.00 2014-09-30 00:02:03.067584038 INFO 2020-07-30 06:48:26,581Z lrauvNc4ToNetcdf.py nudge_coords():686 7: 0.040 0.0000000 0.0000000 2 1.03 0.00 0.00 2014-09-30 00:11:29.047103882 INFO 2020-07-30 06:48:26,586Z lrauvNc4ToNetcdf.py nudge_coords():686 8: 0.102 0.0000000 0.0000000 1 0.00 nan nan 2014-09-30 00:12:43.011264086 INFO 2020-07-30 06:48:26,591Z lrauvNc4ToNetcdf.py nudge_coords():686 9: 0.579 0.0000000 0.0000000 1 0.00 nan nan 2014-09-30 00:19:46.011264086 WARNING 2020-07-30 06:48:26,595Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (839.97400403) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:26,596Z lrauvNc4ToNetcdf.py nudge_coords():686 11: 839.974 0.0011648 -0.0019423 1 0.00 -inf -inf 2014-09-30 00:26:28.011264086 WARNING 2020-07-30 06:48:26,600Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (80.157583952) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:26,601Z lrauvNc4ToNetcdf.py nudge_coords():686 12: 80.158 0.0001422 -0.0001953 1 0.00 -inf -inf 2014-09-30 00:40:28.010240078 WARNING 2020-07-30 06:48:26,605Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (184.876411915) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:26,606Z lrauvNc4ToNetcdf.py nudge_coords():686 13: 184.876 0.0003157 -0.0004977 1 0.00 -inf -inf 2014-09-30 00:41:49.011264086 INFO 2020-07-30 06:48:26,611Z lrauvNc4ToNetcdf.py nudge_coords():686 14: 1.043 0.0000000 0.0000000 1744 24.15 0.00 0.00 2014-09-30 01:09:03.011264086 INFO 2020-07-30 06:48:26,616Z lrauvNc4ToNetcdf.py nudge_coords():686 15: 0.535 0.0000000 0.0000000 1 0.00 nan nan 2014-09-30 01:11:28.089087963 INFO 2020-07-30 06:48:26,621Z lrauvNc4ToNetcdf.py nudge_coords():686 17: 0.825 0.0000000 0.0000000 2 4.82 0.00 0.00 2014-09-30 01:30:54.012288094 INFO 2020-07-30 06:48:26,626Z lrauvNc4ToNetcdf.py nudge_coords():686 19: 1.240 0.0000000 0.0000000 2 14.75 0.00 0.00 2014-09-30 01:48:57.010240078 WARNING 2020-07-30 06:48:26,630Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (23.949700832) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:26,632Z lrauvNc4ToNetcdf.py nudge_coords():686 21: 23.950 0.0000420 -0.0000437 1 0.00 -inf -inf 2014-09-30 02:03:58.010240078 INFO 2020-07-30 06:48:26,637Z lrauvNc4ToNetcdf.py nudge_coords():686 22: 0.420 0.0139103 0.0009567 125 14.61 7.60 12.13 2014-09-30 02:18:58.523581027 INFO 2020-07-30 06:48:26,641Z lrauvNc4ToNetcdf.py nudge_coords():716 18: - - - 1 0.00 - - INFO 2020-07-30 06:48:26,641Z lrauvNc4ToNetcdf.py nudge_coords():720 Points in final series = 3770 INFO 2020-07-30 06:48:26,664Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():549 http://odss.mbari.org/trackingdb/position/makai_ac/between/20140929T210111/20140930T032015/data.csv INFO 2020-07-30 06:48:26,693Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():572 Found 0 position values from the Tracking database WARNING 2020-07-30 06:48:26,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1136 Interpolated 'time' variable has 1 repeated values at indices [0] INFO 2020-07-30 06:48:26,698Z lrauvNc4ToNetcdf.py processResampleNc4File():1137 Overwriting interpolated repeated values with time's index values INFO 2020-07-30 06:48:26,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1152 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'oxygen', 'salinity', 'temperature', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-07-30 06:48:27,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1155 Wrote /mbari/LRAUV/makai/missionlogs/2014/20140929_20141010/20140929T220101/201409292201_201409300220_2S_scieng.nc