INFO 2020-07-30 06:47:56,291Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/makai/missionlogs/2014/20140923_20140923/20140923T222612/201409232226_201409240105.nc4 file... INFO 2020-07-30 06:47:56,292Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201409232226_201409240105.nc4 INFO 2020-07-30 06:47:57,033Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/makai/missionlogs/2014/20140923_20140923/20140923T222612/201409232226_201409240105.nc4 INFO 2020-07-30 06:47:57,438Z lrauvNc4ToNetcdf.py createSeries():240 depth : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:57,665Z lrauvNc4ToNetcdf.py createSeries():240 time : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:58,273Z lrauvNc4ToNetcdf.py createSeries():240 depth : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:58,498Z lrauvNc4ToNetcdf.py createSeries():240 time : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:59,103Z lrauvNc4ToNetcdf.py createSeries():240 depth : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:59,326Z lrauvNc4ToNetcdf.py createSeries():240 time : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:47:59,930Z lrauvNc4ToNetcdf.py createSeries():240 depth : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:00,157Z lrauvNc4ToNetcdf.py createSeries():240 time : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 WARNING 2020-07-30 06:48:00,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from latitude repeated/decreasing values at indices: [3265] WARNING 2020-07-30 06:48:00,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from longitude repeated/decreasing values at indices: [3265] WARNING 2020-07-30 06:48:00,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from depth repeated/decreasing values at indices: [ 574 575 576 6511] WARNING 2020-07-30 06:48:00,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from time repeated/decreasing values at indices: [ 572 573 574 6509] INFO 2020-07-30 06:48:00,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-30 06:48:00,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:00,392Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:00,615Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:00,617Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:00,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:00,804Z lrauvNc4ToNetcdf.py createSeries():240 depth : 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:00,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2020-07-30 06:48:00,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-30 06:48:00,998Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_salinity empty so skipping INFO 2020-07-30 06:48:01,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_temperature empty so skipping INFO 2020-07-30 06:48:01,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-30 06:48:01,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-30 06:48:01,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-30 06:48:01,032Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-07-30 06:48:01,045Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-07-30 06:48:01,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-07-30 06:48:01,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-07-30 06:48:01,064Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-07-30 06:48:01,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-07-30 06:48:01,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-07-30 06:48:01,171Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-30 06:48:01,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-30 06:48:01,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-30 06:48:01,524Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-30 06:48:01,545Z lrauvNc4ToNetcdf.py createSeries():240 platform_pitch_angle: 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:01,769Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:01,790Z lrauvNc4ToNetcdf.py createSeries():240 platform_roll_angle: 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:02,015Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'arcdeg', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:02,036Z lrauvNc4ToNetcdf.py createSeries():240 platform_orientation: 9 v_t values found before 2014-09-23 22:26:00 and after 2014-09-24 01:05:00 INFO 2020-07-30 06:48:02,261Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 06:48:02,262Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/makai/missionlogs/2014/20140923_20140923/20140923T222612/201409232226_201409240105.nc4 INFO 2020-07-30 06:48:02,638Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-07-30 06:48:02,640Z lrauvNc4ToNetcdf.py nudge_coords():660 - - - 1 0.00 - - - INFO 2020-07-30 06:48:02,642Z lrauvNc4ToNetcdf.py nudge_coords():686 0: 0.171 0.0000000 0.0000000 167 1.25 0.00 0.00 2014-09-23 22:32:56.010240078 INFO 2020-07-30 06:48:02,647Z lrauvNc4ToNetcdf.py nudge_coords():686 1: 0.412 0.0030199 0.0042866 443 3.73 134.27 212.93 2014-09-23 22:44:30.461604118 INFO 2020-07-30 06:48:02,652Z lrauvNc4ToNetcdf.py nudge_coords():686 2: 0.231 0.0000000 0.0000000 2 10.03 0.00 0.00 2014-09-23 22:54:33.010240078 WARNING 2020-07-30 06:48:02,656Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (240.95657897) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:02,658Z lrauvNc4ToNetcdf.py nudge_coords():686 4: 240.957 0.0002392 0.0001213 1 0.00 inf inf 2014-09-23 22:57:31.038912058 INFO 2020-07-30 06:48:02,662Z lrauvNc4ToNetcdf.py nudge_coords():686 5: 1.026 0.0000000 0.0000000 2653 24.83 0.00 0.00 2014-09-23 23:26:23.023551941 INFO 2020-07-30 06:48:02,668Z lrauvNc4ToNetcdf.py nudge_coords():686 6: 0.105 0.0000000 0.0000000 1 0.00 nan nan 2014-09-23 23:28:34.010240078 INFO 2020-07-30 06:48:02,672Z lrauvNc4ToNetcdf.py nudge_coords():686 7: 0.240 0.0000000 0.0000000 1 0.00 nan nan 2014-09-23 23:28:37.052223921 INFO 2020-07-30 06:48:02,677Z lrauvNc4ToNetcdf.py nudge_coords():686 8: 0.409 0.0103660 0.0233354 4620 40.65 68.57 106.39 2014-09-24 00:11:32.092673063 WARNING 2020-07-30 06:48:02,681Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (684.775151968) > max_sec_diff_at_end (10) INFO 2020-07-30 06:48:02,683Z lrauvNc4ToNetcdf.py nudge_coords():686 9: 684.775 -0.0011988 0.0004868 1 0.00 inf inf 2014-09-24 00:11:33.011264086 INFO 2020-07-30 06:48:02,687Z lrauvNc4ToNetcdf.py nudge_coords():686 10: 0.008 0.0000000 0.0000000 2 6.88 0.00 0.00 2014-09-24 00:29:51.026623964 INFO 2020-07-30 06:48:02,692Z lrauvNc4ToNetcdf.py nudge_coords():686 11: 0.286 0.0000000 0.0000000 513 3.97 0.00 0.00 2014-09-24 00:45:38.010240078 INFO 2020-07-30 06:48:02,697Z lrauvNc4ToNetcdf.py nudge_coords():686 13: 0.037 0.0000000 0.0000000 2 6.10 0.00 0.00 2014-09-24 01:00:34.012288094 INFO 2020-07-30 06:48:02,701Z lrauvNc4ToNetcdf.py nudge_coords():716 13: - - - 0 0.00 - - INFO 2020-07-30 06:48:02,701Z lrauvNc4ToNetcdf.py nudge_coords():720 Points in final series = 8407 INFO 2020-07-30 06:48:02,720Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():549 http://odss.mbari.org/trackingdb/position/makai_ac/between/20140923T212623/20140924T020542/data.csv INFO 2020-07-30 06:48:02,763Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():572 Found 0 position values from the Tracking database INFO 2020-07-30 06:48:02,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1152 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'oxygen', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-07-30 06:48:03,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1155 Wrote /mbari/LRAUV/makai/missionlogs/2014/20140923_20140923/20140923T222612/201409232226_201409240105_2S_scieng.nc