INFO 2025-10-20 23:01:15,893 process.py process_mission():429 [1] commandline = /src/data/process_i2map.py -v --noinput --start_year 2019 --end_year 2019 --start_yd 1 --end_yd 365 --num_cores 1 --clobber INFO 2025-10-20 23:01:15,893 process.py process_mission():449 [1] Processing i2map mission 2019.057.04 by user docker_user on host bc943cff5f21 INFO 2025-10-20 23:01:15,893 process.py download_process():165 [1] Download and processing steps for 2019.057.04 INFO 2025-10-20 23:01:15,893 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/M3/master/i2MAP/2019/02/20190226/2019.057.04 INFO 2025-10-20 23:01:15,894 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/M3/master/i2MAP/2019/02/20190226/2019.057.04 to /data/auv_data/i2map/missionlogs/2019.057.04 INFO 2025-10-20 23:01:16,091 logs2netcdfs.py download_process_logs():779 [1] Processing mission: i2map 2019.057.04 INFO 2025-10-20 23:01:16,091 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.057.04/gps.log (114764 bytes) INFO 2025-10-20 23:01:16,119 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.057.04/gps.log: [1395] INFO 2025-10-20 23:01:16,121 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.057.04/navigation.log (4886644 bytes) INFO 2025-10-20 23:01:16,679 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.057.04/navigation.log: [ 6192 6193 6194 6195 6196 13423 13424 13425 13426 13427] INFO 2025-10-20 23:01:16,704 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.057.04/parosci.log (1389350 bytes) INFO 2025-10-20 23:01:16,882 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.057.04/parosci.log: [12673 12674 12675 12676 12677 12678 12679 12680 12681 12682 12683 27066 27067 27068 27069 27070 27071 27072 27073 27074 27075 27076] INFO 2025-10-20 23:01:16,885 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.057.04/seabird25p.log (2780170 bytes) INFO 2025-10-20 23:01:17,095 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.057.04/seabird25p.log: [ 1 10096 10097 10098 10099 10100 10101 10102 10103 10104 21657 21658 21659 21660 21661 21662 21663 21664 21665] INFO 2025-10-20 23:01:17,105 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.057.04/tailCone.log (698923 bytes) INFO 2025-10-20 23:01:17,199 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.057.04/tailCone.log: [ 6379 6380 6381 6382 6383 13610 13611 13612 13613 13614] INFO 2025-10-20 23:01:17,201 logs2netcdfs.py download_process_logs():807 [1] Time to process: 1.11 seconds INFO 2025-10-20 23:01:17,202 process.py calibrate():227 [1] Calibration steps for 2019.057.04 INFO 2025-10-20 23:01:19,654 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-10-20 23:01:19,657 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-10-20 23:01:20,268 calibrate.py _nudge_pos():1806 [1] 88: 0.140 0.0012802 0.0005310 6635 22.13 8.583 4.447 2019-02-26T19:00:15.241009408 INFO 2025-10-20 23:01:27,707 calibrate.py _nudge_pos():1806 [1] 883: 0.060 0.0000151 0.0000334 15 0.05 48.089 132.818 2019-02-26T19:13:32.436397824 INFO 2025-10-20 23:01:34,179 calibrate.py _nudge_pos():1862 [1] 1543: - - - 5 0.01 - - INFO 2025-10-20 23:01:34,179 calibrate.py _nudge_pos():1868 [1] Points in final series = 14354 INFO 2025-10-20 23:01:35,996 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 2935 on port side INFO 2025-10-20 23:01:35,996 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "2935" INFO 2025-10-20 23:01:36,156 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2014_Nov 2021_Mar 2022_Apr WARNING 2025-10-20 23:01:36,160 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2014_Nov INFO 2025-10-20 23:01:36,160 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:01:36,164 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2021_Mar INFO 2025-10-20 23:01:36,164 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:01:36,169 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr INFO 2025-10-20 23:01:36,169 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 23:01:36,175 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml has CalibrationDate 2022-03-22 00:00:00+00:00 INFO 2025-10-20 23:01:36,175 calibrate.py _read_oxy_coeffs():1253 [1] Breaking from loop as /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is after 2019.057.04 with mission_start=2019-02-26T18:36:54.570560768 INFO 2025-10-20 23:01:36,175 calibrate.py _read_oxy_coeffs():1270 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is the first calibration file, but is after 2019.057.04 with mission_start=2019-02-26T18:36:54.570560768 INFO 2025-10-20 23:01:36,631 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_port: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml file: {'Soc': 0.42595, 'offset': -0.5339, 'A': -0.0041113, 'B': 0.00020802, 'C': -3.0027e-06, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.09, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 23:01:36,635 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 3488 on stbd side INFO 2025-10-20 23:01:36,635 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "3488" INFO 2025-10-20 23:01:36,812 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2016_dec 2021_mar 2022_Jan WARNING 2025-10-20 23:01:36,818 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec INFO 2025-10-20 23:01:36,818 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:01:36,823 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2021_mar INFO 2025-10-20 23:01:36,823 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:01:36,828 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2022_Jan INFO 2025-10-20 23:01:36,828 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 23:01:36,836 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml has CalibrationDate 2016-12-16 00:00:00+00:00 INFO 2025-10-20 23:01:36,836 calibrate.py _read_oxy_coeffs():1263 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml is just before 2019.057.04 with mission_start=2019-02-26T18:36:54.570560768 INFO 2025-10-20 23:01:37,258 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_stbd: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml file: {'Soc': 0.44664, 'offset': -0.507, 'A': -0.0030812, 'B': 7.8442e-05, 'C': -9.0601e-07, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.44, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 23:01:37,877 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 10 seconds, d_end_time_diff: 0 seconds INFO 2025-10-20 23:01:38,059 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 10 seconds, d_end_time_diff: 0 seconds INFO 2025-10-20 23:01:38,061 calibrate.py _ctd_process():2919 [1] Performing range checking of ['seabird25p_salinity'] in 2019.057.04/seabird25p.nc INFO 2025-10-20 23:01:38,063 calibrate.py _range_qc_combined_nc():898 [1] Setting 2 seabird25p_salinity values to NaN INFO 2025-10-20 23:01:38,063 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('seabird25p_salinity', Range(min=30, max=40))] INFO 2025-10-20 23:01:38,064 calibrate.py _range_qc_combined_nc():936 [1] Done range checking seabird25p INFO 2025-10-20 23:01:38,364 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_cal.nc INFO 2025-10-20 23:01:40,013 calibrate.py write_netcdf():3512 [1] Data variables written: depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_propRpm, tailcone_time, time INFO 2025-10-20 23:01:40,015 process.py align():251 [1] Alignment steps for 2019.057.04 INFO 2025-10-20 23:01:40,033 align.py process_cal():139 [1] Processing i2map_2019.057.04_cal.nc from /data/auv_data/i2map/missionnetcdfs/2019.057.04 INFO 2025-10-20 23:01:40,041 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:40,043 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:40,062 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:40,064 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:40,081 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:40,084 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:40,094 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-10-20 23:01:40,094 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-10-20 23:01:40,101 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:40,103 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:40,121 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,124 align.py process_cal():249 [1] seabird25p_temperature: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,149 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,152 align.py process_cal():249 [1] seabird25p_conductivity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,173 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,175 align.py process_cal():249 [1] seabird25p_salinity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,197 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,200 align.py process_cal():249 [1] seabird25p_temperature_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,221 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,224 align.py process_cal():249 [1] seabird25p_conductivity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,245 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,247 align.py process_cal():249 [1] seabird25p_salinity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,269 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,271 align.py process_cal():249 [1] seabird25p_dissolvedO2_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,293 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,295 align.py process_cal():249 [1] seabird25p_oxygen_mll_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,316 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,319 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,340 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,343 align.py process_cal():249 [1] seabird25p_dissolvedO2_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,364 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,367 align.py process_cal():249 [1] seabird25p_oxygen_mll_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,387 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,390 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,411 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,413 align.py process_cal():249 [1] seabird25p_beam_transmittance: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,434 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.057.04_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:40,436 align.py process_cal():249 [1] seabird25p_depth: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:40,460 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:40,475 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_align.nc INFO 2025-10-20 23:01:40,502 align.py write_netcdf():342 [1] Data variables written: navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_latitude, seabird25p_longitude, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-10-20 23:01:40,503 process.py resample():273 [1] Resampling steps for 2019.057.04 INFO 2025-10-20 23:01:40,504 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-10-20 23:01:40,518 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_align.nc mission netCDF file INFO 2025-10-20 23:01:40,520 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_align.nc mission netCDF file INFO 2025-10-20 23:01:40,521 resample.py get_mission_start_end():1145 [1] navigation: 2019-02-26T18:37:18.848897536 to 2019-02-26T19:25:11.047665920 (0 days 00:00:00.019998720 before mission_end) INFO 2025-10-20 23:01:40,528 resample.py get_mission_start_end():1145 [1] seabird25p: 2019-02-26T18:36:54.570560768 to 2019-02-26T19:25:11.067664640 (0 days 00:00:00 before mission_end) INFO 2025-10-20 23:01:40,530 resample.py get_mission_start_end():1145 [1] tailcone : 2019-02-26T18:36:41.591449856 to 2019-02-26T19:25:10.937673216 (0 days 00:00:00.129991424 before mission_end) INFO 2025-10-20 23:01:40,531 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_align.nc mission netCDF file INFO 2025-10-20 23:01:40,532 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,600 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,614 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,627 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,639 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,653 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,666 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,679 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,692 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,705 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,718 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,731 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,744 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,756 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,769 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,782 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,795 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,808 resample.py resample_variable():1031 [1] Resampling seabird25p_beam_transmittance with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,820 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:40,905 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_1S.nc INFO 2025-10-20 23:01:40,906 process.py archive():337 [1] Archiving steps for 2019.057.04 INFO 2025-10-20 23:01:40,906 process.py archive():347 [1] nc_file_base = /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04, BASE_PATH = /data/auv_data INFO 2025-10-20 23:01:40,906 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04 files to /Volumes/AUVCTD/surveys/2019/netcdf INFO 2025-10-20 23:01:40,907 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.057.04_1S.nc INFO 2025-10-20 23:01:40,915 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_1S.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:40,916 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.057.04_cal.nc INFO 2025-10-20 23:01:40,935 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_cal.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:40,937 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.057.04_align.nc INFO 2025-10-20 23:01:40,956 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_align.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:40,963 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/gps.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019057/2019.057.04 done. INFO 2025-10-20 23:01:40,983 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019057/2019.057.04 done. INFO 2025-10-20 23:01:40,993 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019057/2019.057.04 done. INFO 2025-10-20 23:01:41,006 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/seabird25p.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019057/2019.057.04 done. INFO 2025-10-20 23:01:41,018 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019057/2019.057.04 done. INFO 2025-10-20 23:01:41,018 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-10-20 23:01:41,018 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.057.04/i2map_2019.057.04_processing.log /Volumes/AUVCTD/surveys/2019/netcdf