INFO 2025-10-20 22:57:09,967 process.py process_mission():429 [1] commandline = /src/data/process_i2map.py -v --noinput --start_year 2019 --end_year 2019 --start_yd 1 --end_yd 365 --num_cores 1 --clobber INFO 2025-10-20 22:57:09,967 process.py process_mission():449 [1] Processing i2map mission 2019.035.10 by user docker_user on host bc943cff5f21 INFO 2025-10-20 22:57:09,968 process.py download_process():165 [1] Download and processing steps for 2019.035.10 INFO 2025-10-20 22:57:09,968 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/M3/master/i2MAP/2019/02/20190204/2019.035.10 INFO 2025-10-20 22:57:09,968 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/M3/master/i2MAP/2019/02/20190204/2019.035.10 to /data/auv_data/i2map/missionlogs/2019.035.10 INFO 2025-10-20 22:57:11,359 logs2netcdfs.py download_process_logs():779 [1] Processing mission: i2map 2019.035.10 INFO 2025-10-20 22:57:11,359 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.035.10/gps.log (712436 bytes) INFO 2025-10-20 22:57:11,484 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.035.10/gps.log: [1922 6161] INFO 2025-10-20 22:57:11,486 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.035.10/navigation.log (138725604 bytes) INFO 2025-10-20 22:57:21,311 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.035.10/navigation.log: [ 4824 4825 4826 18340 18341 18342 18343 18344 18345 18346 18347 18348 18349 31901 31902 31903 31904 31905 31906 31907 31908 31909 31910 45447 45448 45449 45450 45451 45452 45453 45454 45455 45456 58993 58994 58995 58996 58997 58998 58999 59000 59001 59002 72694 72695 72696 72697 72698 72699 72700 72701 72702 72703 85725 85726 85727 85728 85729 85730 85731 85732 85733 85734 99266 99267 99268 99269 99270 99271 99272 99273 99274 99275 112722 112723 112724 112725 112726 112727 112728 112729 112730 112731 127083 127084 127085 127086 127087 127088 127089 127090 127091 127092 140134 140135 140136 140137 140138 140139 140140 140141 140142 140143 153645 153646 153647 153648 153649 153650 153651 153652 153653 153654 167201 167202 167203 167204 167205 167206 167207 167208 167209 167210 181477 181478 181479 181480 181481 181482 181483 181484 181485 181486 195238 195239 195240 195241 195242 195243 195244 195245 195246 195247 209039 209040 209041 209042 209043 209044 209045 209046 209047 209048 223415 223416 223417 223418 223419 223420 223421 223422 223423 223424 236936 236937 236938 236939 236940 236941 236942 236943 236944 236945 250547 250548 250549 250550 250551 250552 250553 250554 250555 250556 264358 264359 264360 264361 264362 264363 264364 264365 264366 264367 279309 279310 279311 279312 279313 279314 279315 279316 279317 279318 292340 292341 292342 292343 292344 292345 292346 292347 292348 292349 306146 306147 306148 306149 306150 306151 306152 306153 306154 306155 319857 319858 319859 319860 319861 319862 319863 319864 319865 319866 333498 333499 333500 333501 333502 333503 333504 333505 333506 333507 347059 347060 347061 347062 347063 347064 347065 347066 347067 347068 355405 355406 355407 355408 355409 355410 383028 383029 383030 383031 383032 383033 383034] INFO 2025-10-20 22:57:21,955 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.035.10/parosci.log (38997830 bytes) INFO 2025-10-20 22:57:25,024 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.035.10/parosci.log: [ 9954 9955 9956 9957 9958 9959 9960 36856 36857 36858 36859 36860 36861 36862 36863 36864 36865 36866 36867 36868 36869 36870 36871 36872 36873 36874 36875 36876 63848 63849 63850 63851 63852 63853 63854 63855 63856 63857 63858 63859 63860 63861 63862 63863 63864 63865 63866 63867 63868 90808 90809 90810 90811 90812 90813 90814 90815 90816 90817 90818 90819 90820 90821 90822 90823 90824 90825 90826 90827 90828 117769 117770 117771 117772 117773 117774 117775 117776 117777 117778 117779 117780 117781 117782 117783 117784 117785 117786 117787 117788 117789 145040 145041 145042 145043 145044 145045 145046 145047 145048 145049 145050 145051 145052 145053 145054 145055 145056 145057 145058 145059 145060 170977 170978 170979 170980 170981 170982 170983 170984 170985 170986 170987 170988 170989 170990 170991 170992 170993 170994 170995 170996 170997 197928 197929 197930 197931 197932 197933 197934 197935 197936 197937 197938 197939 197940 197941 197942 197943 197944 197945 197946 197947 197948 224709 224710 224711 224712 224713 224714 224715 224716 224717 224718 224719 224720 224721 224722 224723 224724 224725 224726 224727 224728 224729 253294 253295 253296 253297 253298 253299 253300 253301 253302 253303 253304 253305 253306 253307 253308 253309 253310 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445046 445047 445048 445049 445050 445051 445052 445053 471945 471946 471947 471948 471949 471950 471951 471952 471953 471954 471955 471956 471957 471958 471959 471960 471961 471962 471963 471964 471965 499036 499037 499038 499039 499040 499041 499042 499043 499044 499045 499046 499047 499048 499049 499050 499051 499052 499053 499054 499055 499056 526524 526525 526526 526527 526528 526529 526530 526531 526532 526533 526534 526535 526536 526537 526538 526539 526540 526541 526542 526543 526544 556283 556284 556285 556286 556287 556288 556289 556290 556291 556292 556293 556294 556295 556296 556297 556298 556299 556300 556301 556302 556303 582221 582222 582223 582224 582225 582226 582227 582228 582229 582230 582231 582232 582233 582234 582235 582236 582237 582238 582239 582240 582241 609700 609701 609702 609703 609704 609705 609706 609707 609708 609709 609710 609711 609712 609713 609714 609715 609716 609717 609718 609719 609720 636989 636990 636991 636992 636993 636994 636995 636996 636997 636998 636999 637000 637001 637002 637003 637004 637005 637006 637007 637008 637009 664139 664140 664141 664142 664143 664144 664145 664146 664147 664148 664149 664150 664151 664152 664153 664154 664155 664156 664157 664158 664159 691131 691132 691133 691134 691135 691136 691137 691138 691139 691140 691141 691142 691143 691144 691145 691146 691147 691148 691149 691150 691151 707745 707746 707747 707748 707749 707750 707751 707752 707753 707754 707755 707756 707757 762727 762728 762729 762730 762731 762732 762733 762734 762735 762736 762737 762738 762739 762740 762741] INFO 2025-10-20 22:57:25,125 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.035.10/seabird25p.log (4301170 bytes) INFO 2025-10-20 22:57:25,414 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.035.10/seabird25p.log: [ 1 7914 7915 7916 7917 7918 7919 29525 29526 29527 29528 29529 29530 29531 29532 29533 29534 29535 29536 29537 29538 29539 29540 29541] INFO 2025-10-20 22:57:25,431 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2019.035.10/tailCone.log (19579403 bytes) WARNING 2025-10-20 22:57:27,205 logs2netcdfs.py _create_variable():536 [1] rudderCurrent: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,205 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of rudderCurrent.shape[0] (407894) WARNING 2025-10-20 22:57:27,205 logs2netcdfs.py _create_variable():544 [1] rudderCurrent data is short by one, appending the last value: 0 WARNING 2025-10-20 22:57:27,239 logs2netcdfs.py _create_variable():536 [1] propCurrent1: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,239 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of propCurrent1.shape[0] (407894) WARNING 2025-10-20 22:57:27,239 logs2netcdfs.py _create_variable():544 [1] propCurrent1 data is short by one, appending the last value: 0.3484233617782593 WARNING 2025-10-20 22:57:27,273 logs2netcdfs.py _create_variable():536 [1] propCurrent2: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,274 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of propCurrent2.shape[0] (407894) WARNING 2025-10-20 22:57:27,274 logs2netcdfs.py _create_variable():544 [1] propCurrent2 data is short by one, appending the last value: 0 WARNING 2025-10-20 22:57:27,299 logs2netcdfs.py _create_variable():536 [1] propRpm: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,299 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of propRpm.shape[0] (407894) WARNING 2025-10-20 22:57:27,299 logs2netcdfs.py _create_variable():544 [1] propRpm data is short by one, appending the last value: 0 WARNING 2025-10-20 22:57:27,332 logs2netcdfs.py _create_variable():536 [1] elevatorAngle: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,332 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of elevatorAngle.shape[0] (407894) WARNING 2025-10-20 22:57:27,332 logs2netcdfs.py _create_variable():544 [1] elevatorAngle data is short by one, appending the last value: -0.17631344497203827 WARNING 2025-10-20 22:57:27,374 logs2netcdfs.py _create_variable():536 [1] rudderAngle: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,374 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of rudderAngle.shape[0] (407894) WARNING 2025-10-20 22:57:27,375 logs2netcdfs.py _create_variable():544 [1] rudderAngle data is short by one, appending the last value: -0.1873597651720047 WARNING 2025-10-20 22:57:27,408 logs2netcdfs.py _create_variable():536 [1] propPwm: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,408 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of propPwm.shape[0] (407894) WARNING 2025-10-20 22:57:27,408 logs2netcdfs.py _create_variable():544 [1] propPwm data is short by one, appending the last value: 0 WARNING 2025-10-20 22:57:27,434 logs2netcdfs.py _create_variable():536 [1] propTemp: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (407894,) and arg 1 with shape (407893,). INFO 2025-10-20 22:57:27,434 logs2netcdfs.py _create_variable():537 [1] len(data) (407893) does not match shape of propTemp.shape[0] (407894) WARNING 2025-10-20 22:57:27,434 logs2netcdfs.py _create_variable():544 [1] propTemp data is short by one, appending the last value: 0 INFO 2025-10-20 22:57:27,910 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2019.035.10/tailCone.log: [ 5010 5011 5012 18526 18527 18528 18529 18530 18531 18532 18533 18534 18535 18536 32087 32088 32089 32090 32091 32092 32093 32094 32095 32096 45633 45634 45635 45636 45637 45638 45639 45640 45641 45642 59179 59180 59181 59182 59183 59184 59185 59186 59187 59188 72880 72881 72882 72883 72884 72885 72886 72887 72888 72889 72890 85911 85912 85913 85914 85915 85916 85917 85918 85919 85920 85921 99452 99453 99454 99455 99456 99457 99458 99459 99460 99461 99462 112908 112909 112910 112911 112912 112913 112914 112915 112916 112917 127269 127270 127271 127272 127273 127274 127275 127276 127277 127278 140320 140321 140322 140323 140324 140325 140326 140327 140328 140329 153831 153832 153833 153834 153835 153836 153837 153838 153839 153840 167387 167388 167389 167390 167391 167392 167393 167394 167395 167396 167397 181663 181664 181665 181666 181667 181668 181669 181670 181671 181672 195424 195425 195426 195427 195428 195429 195430 195431 195432 195433 209225 209226 209227 209228 209229 209230 209231 209232 209233 209234 223601 223602 223603 223604 223605 223606 223607 223608 223609 223610 237121 237122 237123 237124 237125 237126 237127 237128 237129 237130 237131 250732 250733 250734 250735 250736 250737 250738 250739 250740 250741 264542 264543 264544 264545 264546 264547 264548 264549 264550 264551 279494 279495 279496 279497 279498 279499 279500 279501 279502 279503 292524 292525 292526 292527 292528 292529 292530 292531 292532 292533 306330 306331 306332 306333 306334 306335 306336 306337 306338 306339 320041 320042 320043 320044 320045 320046 320047 320048 320049 320050 333682 333683 333684 333685 333686 333687 333688 333689 333690 333691 347243 347244 347245 347246 347247 347248 347249 347250 347251 347252 355590 355591 355592 355593 355594 355595 383213 383214 383215 383216 383217 383218 383219] INFO 2025-10-20 22:57:27,949 logs2netcdfs.py download_process_logs():807 [1] Time to process: 16.59 seconds INFO 2025-10-20 22:57:27,950 process.py calibrate():227 [1] Calibration steps for 2019.035.10 INFO 2025-10-20 22:58:33,428 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-10-20 22:58:33,430 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-10-20 22:58:34,200 calibrate.py _nudge_pos():1806 [1] 102: 0.080 -0.0032373 -0.0024578 57331 191.20 -2.516 -2.382 2019-02-04T21:27:44.462817024 INFO 2025-10-20 22:58:34,621 calibrate.py _nudge_pos():1806 [1] 142: 0.050 -0.0000145 0.0000036 31 0.10 -21.505 6.581 2019-02-04T21:28:29.469733632 INFO 2025-10-20 22:58:34,748 calibrate.py _nudge_pos():1806 [1] 154: 0.010 0.0021562 -0.0003729 6216 20.75 15.442 -3.330 2019-02-04T21:49:25.479270144 INFO 2025-10-20 22:58:35,257 calibrate.py _nudge_pos():1806 [1] 202: 0.060 0.0003584 0.0000106 1415 4.71 11.299 0.416 2019-02-04T21:54:55.486663424 INFO 2025-10-20 22:58:35,457 calibrate.py _nudge_pos():1806 [1] 221: 0.140 -0.0038384 -0.0084141 48323 161.19 -3.539 -9.672 2019-02-05T00:36:26.308879360 INFO 2025-10-20 22:58:36,116 calibrate.py _nudge_pos():1806 [1] 282: 0.150 0.0022933 -0.0001811 6260 20.86 16.332 -1.609 2019-02-05T00:58:18.309001216 INFO 2025-10-20 22:58:36,170 calibrate.py _nudge_pos():1806 [1] 287: 0.020 0.0000572 0.0000304 101 0.33 25.507 16.878 2019-02-05T00:58:42.507343616 INFO 2025-10-20 22:58:36,610 calibrate.py _nudge_pos():1806 [1] 328: 0.190 0.0006578 -0.0000112 1665 5.55 17.620 -0.373 2019-02-05T01:04:55.311804672 INFO 2025-10-20 22:58:37,198 calibrate.py _nudge_pos():1806 [1] 382: 0.100 -0.0039255 -0.0093358 48108 160.48 -3.635 -10.780 2019-02-05T03:46:17.334899200 INFO 2025-10-20 22:58:37,630 calibrate.py _nudge_pos():1806 [1] 421: 0.150 0.0025949 -0.0010749 6255 20.85 18.495 -9.555 2019-02-05T04:07:46.336596736 INFO 2025-10-20 22:58:38,008 calibrate.py _nudge_pos():1806 [1] 455: 0.180 0.0005839 0.0000473 2064 6.88 12.616 1.273 2019-02-05T04:15:12.336043520 INFO 2025-10-20 22:58:38,613 calibrate.py _nudge_pos():1806 [1] 510: 0.180 -0.0007734 0.0011869 36562 121.96 -0.942 1.803 2019-02-05T06:18:04.344205056 INFO 2025-10-20 22:58:39,195 calibrate.py _nudge_pos():1806 [1] 561: 0.020 -0.0002059 -0.0008129 2796 9.32 -3.283 -16.168 2019-02-05T06:28:13.552471552 INFO 2025-10-20 22:58:39,297 calibrate.py _nudge_pos():1806 [1] 570: 0.020 -0.0000224 0.0000046 40 0.13 -25.587 6.510 2019-02-05T06:28:29.551375616 INFO 2025-10-20 22:58:39,801 calibrate.py _nudge_pos():1806 [1] 615: 0.160 0.0002250 -0.0002211 729 2.43 13.779 -16.884 2019-02-05T06:31:39.348373760 INFO 2025-10-20 22:58:40,465 calibrate.py _nudge_pos():1806 [1] 670: 0.120 -0.0047931 -0.0095526 47688 159.08 -4.477 -11.127 2019-02-05T09:11:38.358663680 INFO 2025-10-20 22:58:40,975 calibrate.py _nudge_pos():1806 [1] 715: 0.200 0.0033167 -0.0000448 6235 20.78 23.715 -0.400 2019-02-05T09:33:09.360224000 INFO 2025-10-20 22:58:41,536 calibrate.py _nudge_pos():1806 [1] 764: 0.170 0.0007349 0.0003945 1525 5.08 21.493 14.389 2019-02-05T09:39:02.356042240 INFO 2025-10-20 22:58:41,548 calibrate.py _nudge_pos():1806 [1] 765: 0.160 0.0000091 0.0000055 15 0.05 28.931 21.748 2019-02-05T09:39:05.355836672 INFO 2025-10-20 22:58:41,673 calibrate.py _nudge_pos():1806 [1] 776: 0.160 0.0000240 0.0000207 34 0.11 32.484 34.866 2019-02-05T09:39:22.354672128 INFO 2025-10-20 22:58:42,098 calibrate.py _nudge_pos():1806 [1] 813: 0.160 -0.0036074 -0.0123314 53678 179.04 -2.994 -12.762 2019-02-05T12:39:01.376592128 INFO 2025-10-20 22:58:42,494 calibrate.py _nudge_pos():1806 [1] 847: 0.100 0.0028696 0.0013116 6266 20.91 20.387 11.621 2019-02-05T13:00:30.395169280 INFO 2025-10-20 22:58:43,137 calibrate.py _nudge_pos():1806 [1] 902: 0.170 0.0021960 0.0006922 6245 20.81 15.673 6.163 2019-02-05T13:22:13.395907328 INFO 2025-10-20 22:58:43,622 calibrate.py _nudge_pos():1806 [1] 941: 0.190 0.0015020 -0.0001930 6235 20.81 10.720 -1.718 2019-02-05T13:43:40.203539968 INFO 2025-10-20 22:58:44,581 calibrate.py _nudge_pos():1806 [1] 1021: 0.060 -0.0000644 0.0001003 25 0.08 -119.583 232.331 2019-02-05T13:45:04.407771648 INFO 2025-10-20 22:59:02,137 calibrate.py _nudge_pos():1806 [1] 2516: 0.010 0.0000013 0.0000024 15 0.05 4.204 9.612 2019-02-05T14:10:01.029648896 INFO 2025-10-20 22:59:03,401 calibrate.py _nudge_pos():1806 [1] 2623: 0.020 0.0000125 -0.0000237 15 0.05 39.651 -94.123 2019-02-05T14:11:50.032181504 INFO 2025-10-20 22:59:08,342 calibrate.py _nudge_pos():1806 [1] 3040: 0.050 0.0000446 -0.0000109 14 0.04 152.831 -46.553 2019-02-05T14:18:50.033409280 INFO 2025-10-20 22:59:09,371 calibrate.py _nudge_pos():1806 [1] 3123: 0.040 0.0000255 0.0000339 25 0.08 47.294 78.447 2019-02-05T14:20:17.227436288 INFO 2025-10-20 22:59:20,838 calibrate.py _nudge_pos():1806 [1] 4086: 0.120 -0.0000333 -0.0000133 49 0.16 -30.914 -15.404 2019-02-05T14:36:29.030863360 INFO 2025-10-20 22:59:26,914 calibrate.py _nudge_pos():1806 [1] 4590: 0.140 -0.0002521 -0.0005789 6230 20.76 -1.803 -5.166 2019-02-05T15:05:38.231034880 INFO 2025-10-20 22:59:31,455 calibrate.py _nudge_pos():1806 [1] 4970: 0.060 -0.0000407 -0.0000521 36 0.12 -51.831 -82.802 2019-02-05T15:12:04.424578560 INFO 2025-10-20 22:59:33,810 calibrate.py _nudge_pos():1806 [1] 5167: 0.090 0.0000320 0.0000494 29 0.09 50.969 98.004 2019-02-05T15:15:26.230753792 INFO 2025-10-20 22:59:34,968 calibrate.py _nudge_pos():1806 [1] 5264: 0.090 0.0000418 -0.0000315 36 0.12 53.270 -50.009 2019-02-05T15:17:09.433684224 INFO 2025-10-20 22:59:36,293 calibrate.py _nudge_pos():1806 [1] 5372: 0.090 0.0000143 -0.0000038 15 0.05 45.551 -15.136 2019-02-05T15:18:59.426149120 INFO 2025-10-20 22:59:45,817 calibrate.py _nudge_pos():1806 [1] 6162: 0.140 0.0000141 -0.0000368 11 0.03 68.516 -222.348 2019-02-05T15:32:09.870803456 INFO 2025-10-20 22:59:46,837 calibrate.py _nudge_pos():1806 [1] 6247: 0.170 -0.0000192 -0.0000043 19 0.06 -47.457 -13.204 2019-02-05T15:33:38.834393856 INFO 2025-10-20 22:59:48,846 calibrate.py _nudge_pos():1806 [1] 6414: 0.150 -0.0000187 -0.0000709 20 0.06 -43.784 -206.845 2019-02-05T15:36:29.042733824 INFO 2025-10-20 23:00:03,162 calibrate.py _nudge_pos():1806 [1] 7610: 0.030 -0.0000359 0.0000250 25 0.08 -66.706 57.892 2019-02-05T15:56:33.240240896 INFO 2025-10-20 23:00:04,494 calibrate.py _nudge_pos():1806 [1] 7717: 0.060 -0.0000265 0.0000000 24 0.08 -51.208 0.021 2019-02-05T15:58:24.042650112 INFO 2025-10-20 23:00:08,489 calibrate.py _nudge_pos():1806 [1] 8014: 0.080 -0.0000645 0.0000057 19 0.06 -159.705 17.474 2019-02-05T16:03:24.042098688 INFO 2025-10-20 23:00:09,292 calibrate.py _nudge_pos():1806 [1] 8075: 0.190 0.0000206 0.0000027 49 0.16 19.120 3.181 2019-02-05T16:04:34.037303808 INFO 2025-10-20 23:00:11,186 calibrate.py _nudge_pos():1806 [1] 8217: 0.080 -0.0007383 -0.0002096 6171 20.57 -5.330 -1.888 2019-02-05T16:27:29.233096704 INFO 2025-10-20 23:00:18,159 calibrate.py _nudge_pos():1806 [1] 8780: 0.010 -0.0000507 -0.0000577 15 0.05 -161.245 -229.058 2019-02-05T16:36:55.434309120 INFO 2025-10-20 23:00:23,715 calibrate.py _nudge_pos():1806 [1] 9232: 0.060 -0.0000274 0.0000173 24 0.08 -53.164 41.751 2019-02-05T16:44:32.233016320 INFO 2025-10-20 23:00:32,192 calibrate.py _nudge_pos():1862 [1] 9844: - - - 4 0.01 - - INFO 2025-10-20 23:00:32,192 calibrate.py _nudge_pos():1868 [1] Points in final series = 407252 INFO 2025-10-20 23:00:49,253 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 2935 on port side INFO 2025-10-20 23:00:49,258 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "2935" INFO 2025-10-20 23:00:49,511 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2014_Nov 2021_Mar 2022_Apr WARNING 2025-10-20 23:00:49,515 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2014_Nov INFO 2025-10-20 23:00:49,516 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:00:49,520 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2021_Mar INFO 2025-10-20 23:00:49,521 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:00:49,525 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr INFO 2025-10-20 23:00:49,525 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 23:00:49,531 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml has CalibrationDate 2022-03-22 00:00:00+00:00 INFO 2025-10-20 23:00:49,531 calibrate.py _read_oxy_coeffs():1253 [1] Breaking from loop as /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is after 2019.035.10 with mission_start=2019-02-04T18:15:02.993358848 INFO 2025-10-20 23:00:49,532 calibrate.py _read_oxy_coeffs():1270 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is the first calibration file, but is after 2019.035.10 with mission_start=2019-02-04T18:15:02.993358848 INFO 2025-10-20 23:00:50,243 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_port: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml file: {'Soc': 0.42595, 'offset': -0.5339, 'A': -0.0041113, 'B': 0.00020802, 'C': -3.0027e-06, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.09, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 23:00:50,247 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 3488 on stbd side INFO 2025-10-20 23:00:50,248 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "3488" INFO 2025-10-20 23:00:50,474 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2016_dec 2021_mar 2022_Jan WARNING 2025-10-20 23:00:50,479 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec INFO 2025-10-20 23:00:50,479 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:00:50,484 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2021_mar INFO 2025-10-20 23:00:50,484 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 23:00:50,488 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2022_Jan INFO 2025-10-20 23:00:50,488 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 23:00:50,494 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml has CalibrationDate 2016-12-16 00:00:00+00:00 INFO 2025-10-20 23:00:50,494 calibrate.py _read_oxy_coeffs():1263 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml is just before 2019.035.10 with mission_start=2019-02-04T18:15:02.993358848 INFO 2025-10-20 23:00:51,214 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_stbd: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml file: {'Soc': 0.44664, 'offset': -0.507, 'A': -0.0030812, 'B': 7.8442e-05, 'C': -9.0601e-07, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.44, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 23:00:52,199 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 10 seconds, d_end_time_diff: -77139 seconds INFO 2025-10-20 23:00:52,553 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 10 seconds, d_end_time_diff: -77139 seconds INFO 2025-10-20 23:00:52,555 calibrate.py _ctd_process():2919 [1] Performing range checking of ['seabird25p_salinity'] in 2019.035.10/seabird25p.nc INFO 2025-10-20 23:00:52,556 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 seabird25p_salinity values to NaN INFO 2025-10-20 23:00:52,556 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('seabird25p_salinity', Range(min=30, max=40))] INFO 2025-10-20 23:00:52,556 calibrate.py _range_qc_combined_nc():936 [1] Done range checking seabird25p INFO 2025-10-20 23:01:00,285 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_cal.nc INFO 2025-10-20 23:01:02,952 calibrate.py write_netcdf():3512 [1] Data variables written: depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_propRpm, tailcone_time, time INFO 2025-10-20 23:01:02,956 process.py align():251 [1] Alignment steps for 2019.035.10 INFO 2025-10-20 23:01:02,990 align.py process_cal():139 [1] Processing i2map_2019.035.10_cal.nc from /data/auv_data/i2map/missionnetcdfs/2019.035.10 INFO 2025-10-20 23:01:03,094 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:03,104 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:03,389 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:03,407 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:03,659 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:03,673 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:03,834 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-10-20 23:01:03,834 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-10-20 23:01:03,953 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 23:01:03,969 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:04,189 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,195 align.py process_cal():249 [1] seabird25p_temperature: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,284 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,288 align.py process_cal():249 [1] seabird25p_conductivity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,378 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,381 align.py process_cal():249 [1] seabird25p_salinity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,470 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,473 align.py process_cal():249 [1] seabird25p_temperature_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,575 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,578 align.py process_cal():249 [1] seabird25p_conductivity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,667 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,671 align.py process_cal():249 [1] seabird25p_salinity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,761 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,764 align.py process_cal():249 [1] seabird25p_dissolvedO2_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,852 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,855 align.py process_cal():249 [1] seabird25p_oxygen_mll_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:04,943 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:04,946 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,037 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:05,040 align.py process_cal():249 [1] seabird25p_dissolvedO2_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,130 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:05,133 align.py process_cal():249 [1] seabird25p_oxygen_mll_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,222 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:05,225 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,315 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:05,319 align.py process_cal():249 [1] seabird25p_beam_transmittance: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,412 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2019.035.10_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 23:01:05,414 align.py process_cal():249 [1] seabird25p_depth: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 23:01:05,585 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 23:01:05,756 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_align.nc INFO 2025-10-20 23:01:05,838 align.py write_netcdf():342 [1] Data variables written: navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_latitude, seabird25p_longitude, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-10-20 23:01:05,840 process.py resample():273 [1] Resampling steps for 2019.035.10 INFO 2025-10-20 23:01:05,840 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-10-20 23:01:05,861 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_align.nc mission netCDF file INFO 2025-10-20 23:01:05,867 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_align.nc mission netCDF file INFO 2025-10-20 23:01:05,870 resample.py get_mission_start_end():1145 [1] navigation: 2019-02-04T18:15:28.031643648 to 2019-02-05T16:55:24.038364416 (0 days 00:00:00 before mission_end) INFO 2025-10-20 23:01:05,872 resample.py get_mission_start_end():1145 [1] seabird25p: 2019-02-04T18:15:02.993358848 to 2019-02-04T19:29:45.396402176 (0 days 21:25:38.641962240 before mission_end) WARNING 2025-10-20 23:01:05,873 resample.py get_mission_start_end():1156 [1] Instrument seabird25p has a gap > 5 minutes at the end of the mission: 0 days 21:25:38.641962240 INFO 2025-10-20 23:01:05,877 resample.py get_mission_start_end():1145 [1] tailcone : 2019-02-04T18:14:50.924185600 to 2019-02-05T16:54:24.272458752 (0 days 00:00:59.765905664 before mission_end) INFO 2025-10-20 23:01:05,878 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_align.nc mission netCDF file INFO 2025-10-20 23:01:05,878 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:06,766 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:06,887 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,007 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,127 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,160 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,160 resample.py resample_variable():1038 [1] Padding seabird25p_temperature with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,188 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,188 resample.py resample_variable():1038 [1] Padding seabird25p_conductivity with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,211 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,211 resample.py resample_variable():1038 [1] Padding seabird25p_salinity with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,233 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,233 resample.py resample_variable():1038 [1] Padding seabird25p_temperature_onboard with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,255 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,255 resample.py resample_variable():1038 [1] Padding seabird25p_conductivity_onboard with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,277 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,277 resample.py resample_variable():1038 [1] Padding seabird25p_salinity_onboard with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,299 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,299 resample.py resample_variable():1038 [1] Padding seabird25p_dissolvedO2_port with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,321 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,321 resample.py resample_variable():1038 [1] Padding seabird25p_oxygen_mll_port with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,343 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_port with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,343 resample.py resample_variable():1038 [1] Padding seabird25p_oxygen_umolkg_port with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,364 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,365 resample.py resample_variable():1038 [1] Padding seabird25p_dissolvedO2_stbd with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,387 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,387 resample.py resample_variable():1038 [1] Padding seabird25p_oxygen_mll_stbd with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,410 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,410 resample.py resample_variable():1038 [1] Padding seabird25p_oxygen_umolkg_stbd with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,432 resample.py resample_variable():1031 [1] Resampling seabird25p_beam_transmittance with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:07,432 resample.py resample_variable():1038 [1] Padding seabird25p_beam_transmittance with 0 days 21:25:38.641962240 of NaNs to the end of mission INFO 2025-10-20 23:01:07,545 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-10-20 23:01:08,060 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_1S.nc INFO 2025-10-20 23:01:08,062 process.py archive():337 [1] Archiving steps for 2019.035.10 INFO 2025-10-20 23:01:08,062 process.py archive():347 [1] nc_file_base = /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10, BASE_PATH = /data/auv_data INFO 2025-10-20 23:01:08,064 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10 files to /Volumes/AUVCTD/surveys/2019/netcdf INFO 2025-10-20 23:01:08,066 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.035.10_1S.nc INFO 2025-10-20 23:01:08,110 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_1S.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:08,111 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.035.10_cal.nc INFO 2025-10-20 23:01:08,317 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_cal.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:08,318 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2019/netcdf/i2map_2019.035.10_align.nc INFO 2025-10-20 23:01:08,453 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_align.nc /Volumes/AUVCTD/surveys/2019/netcdf done. INFO 2025-10-20 23:01:08,465 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/gps.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019035/2019.035.10 done. INFO 2025-10-20 23:01:08,841 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019035/2019.035.10 done. INFO 2025-10-20 23:01:08,964 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019035/2019.035.10 done. INFO 2025-10-20 23:01:08,983 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/seabird25p.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019035/2019.035.10 done. INFO 2025-10-20 23:01:09,049 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2019/2019035/2019.035.10 done. INFO 2025-10-20 23:01:09,049 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-10-20 23:01:09,049 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2019.035.10/i2map_2019.035.10_processing.log /Volumes/AUVCTD/surveys/2019/netcdf