INFO 2025-10-20 22:10:42,025 process.py process_mission():429 [1] commandline = /src/data/process_i2map.py -v --noinput --start_year 2018 --end_year 2018 --start_yd 1 --end_yd 365 --num_cores 1 --clobber INFO 2025-10-20 22:10:42,025 process.py process_mission():449 [1] Processing i2map mission 2018.094.00 by user docker_user on host 6ad284762e9a INFO 2025-10-20 22:10:42,025 process.py download_process():165 [1] Download and processing steps for 2018.094.00 INFO 2025-10-20 22:10:42,025 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/M3/master/i2MAP/2018/04/20180404/2018.094.00 INFO 2025-10-20 22:10:42,026 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/M3/master/i2MAP/2018/04/20180404/2018.094.00 to /data/auv_data/i2map/missionlogs/2018.094.00 INFO 2025-10-20 22:10:42,365 logs2netcdfs.py download_process_logs():779 [1] Processing mission: i2map 2018.094.00 INFO 2025-10-20 22:10:42,366 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2018.094.00/gps.log (296852 bytes) INFO 2025-10-20 22:10:42,403 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2018.094.00/navigation.log (23336064 bytes) INFO 2025-10-20 22:10:44,066 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2018.094.00/parosci.log (6481622 bytes) INFO 2025-10-20 22:10:44,605 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2018.094.00/seabird25p.log (13193410 bytes) INFO 2025-10-20 22:10:45,475 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/i2map/missionlogs/2018.094.00/seabird25p.log: [1] INFO 2025-10-20 22:10:45,521 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/i2map/missionlogs/2018.094.00/tailCone.log (3293707 bytes) INFO 2025-10-20 22:10:45,912 logs2netcdfs.py download_process_logs():807 [1] Time to process: 3.55 seconds INFO 2025-10-20 22:10:45,912 process.py calibrate():227 [1] Calibration steps for 2018.094.00 INFO 2025-10-20 22:10:46,027 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-10-20 22:10:46,029 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-10-20 22:10:46,906 calibrate.py _nudge_pos():1806 [1] 126: 0.180 0.0029602 0.0030484 46898 156.32 2.814 3.613 2018-04-04T18:47:48.499144448 INFO 2025-10-20 22:10:48,501 calibrate.py _nudge_pos():1806 [1] 297: 0.010 0.0006501 -0.0006538 1256 4.18 23.092 -28.960 2018-04-04T18:54:49.700290304 INFO 2025-10-20 22:10:48,512 calibrate.py _nudge_pos():1806 [1] 298: 0.010 0.0007088 -0.0006278 15 0.05 2257.049 -2493.178 2018-04-04T18:54:52.700084736 INFO 2025-10-20 22:10:51,706 calibrate.py _nudge_pos():1806 [1] 641: 0.030 0.0002986 0.0001480 15 0.05 950.813 587.659 2018-04-04T19:00:37.706450176 INFO 2025-10-20 22:10:54,142 calibrate.py _nudge_pos():1806 [1] 903: 0.060 0.0001508 -0.0002114 40 0.13 172.332 -301.332 2018-04-04T19:05:08.697885952 INFO 2025-10-20 22:11:01,956 calibrate.py _nudge_pos():1806 [1] 1739: 0.120 -0.0000340 -0.0000404 15 0.05 -108.167 -160.265 2018-04-04T19:19:06.700478720 INFO 2025-10-20 22:11:09,008 calibrate.py _nudge_pos():1806 [1] 2494: 0.180 0.0001381 0.0001680 30 0.10 212.305 321.986 2018-04-04T19:31:46.698415616 INFO 2025-10-20 22:11:19,107 calibrate.py _nudge_pos():1806 [1] 3572: 0.050 0.0000057 -0.0000132 20 0.06 13.264 -38.716 2018-04-04T19:49:47.904347904 INFO 2025-10-20 22:11:21,702 calibrate.py _nudge_pos():1806 [1] 3849: 0.070 0.0000070 -0.0000029 15 0.05 22.172 -11.677 2018-04-04T19:54:27.905166336 INFO 2025-10-20 22:11:24,157 calibrate.py _nudge_pos():1862 [1] 4071: - - - 2 0.00 - - INFO 2025-10-20 22:11:24,158 calibrate.py _nudge_pos():1868 [1] Points in final series = 68487 INFO 2025-10-20 22:11:30,237 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 2935 on port side INFO 2025-10-20 22:11:30,239 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "2935" INFO 2025-10-20 22:11:30,442 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2014_Nov 2021_Mar 2022_Apr WARNING 2025-10-20 22:11:30,446 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2014_Nov INFO 2025-10-20 22:11:30,446 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 22:11:30,450 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2021_Mar INFO 2025-10-20 22:11:30,450 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 22:11:30,454 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr INFO 2025-10-20 22:11:30,454 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 22:11:30,460 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml has CalibrationDate 2022-03-22 00:00:00+00:00 INFO 2025-10-20 22:11:30,460 calibrate.py _read_oxy_coeffs():1253 [1] Breaking from loop as /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is after 2018.094.00 with mission_start=2018-04-04T16:09:37.729306624 INFO 2025-10-20 22:11:30,460 calibrate.py _read_oxy_coeffs():1270 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml is the first calibration file, but is after 2018.094.00 with mission_start=2018-04-04T16:09:37.729306624 INFO 2025-10-20 22:11:32,425 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_port: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/2935/2022_Apr/Oxygen_SBE43_2935.xml file: {'Soc': 0.42595, 'offset': -0.5339, 'A': -0.0041113, 'B': 0.00020802, 'C': -3.0027e-06, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.09, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 22:11:32,429 calibrate.py _read_oxy_coeffs():1189 [1] Looking for calibration file for O2 sensor serial number 3488 on stbd side INFO 2025-10-20 22:11:32,429 calibrate.py _read_oxy_coeffs():1219 [1] Executing: find "/Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files" -name "3488" INFO 2025-10-20 22:11:32,614 calibrate.py _read_oxy_coeffs():1238 [1] Found calibration date dirs: 2016_dec 2021_mar 2022_Jan WARNING 2025-10-20 22:11:32,618 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec INFO 2025-10-20 22:11:32,619 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 22:11:32,623 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2021_mar INFO 2025-10-20 22:11:32,623 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} WARNING 2025-10-20 22:11:32,627 calibrate.py _cal_date_xml_files():1081 [1] Found 4 xml files in /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2022_Jan INFO 2025-10-20 22:11:32,627 calibrate.py _cal_date_xml_files():1087 [1] {xml_files} INFO 2025-10-20 22:11:32,635 calibrate.py _read_oxy_coeffs():1247 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml has CalibrationDate 2016-12-16 00:00:00+00:00 INFO 2025-10-20 22:11:32,636 calibrate.py _read_oxy_coeffs():1263 [1] File /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml is just before 2018.094.00 with mission_start=2018-04-04T16:09:37.729306624 INFO 2025-10-20 22:11:34,620 calibrate.py _calibrated_oxygen():2513 [1] dissolvedO2_stbd: parsed from /Volumes/DMO/MDUC_CORE_CTD_200103/Calibration Files/SBE-43/3488/2016_dec/43-3488.xml file: {'Soc': 0.44664, 'offset': -0.507, 'A': -0.0030812, 'B': 7.8442e-05, 'C': -9.0601e-07, 'D0': 2.5826, 'D1': 0.000192634, 'D2': -0.0464803, 'E': 0.036, 'Tau20': 1.44, 'H1': -0.033, 'H2': 5000.0, 'H3': 1450.0} INFO 2025-10-20 22:11:37,333 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 7 seconds, d_end_time_diff: 0 seconds INFO 2025-10-20 22:11:38,097 calibrate.py _geometric_depth_correction():3423 [1] seabird25p: d_beg_time_diff: 7 seconds, d_end_time_diff: 0 seconds INFO 2025-10-20 22:11:38,100 calibrate.py _ctd_process():2919 [1] Performing range checking of ['seabird25p_salinity'] in 2018.094.00/seabird25p.nc INFO 2025-10-20 22:11:38,101 calibrate.py _range_qc_combined_nc():898 [1] Setting 1 seabird25p_salinity values to NaN INFO 2025-10-20 22:11:38,101 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('seabird25p_salinity', Range(min=30, max=40))] INFO 2025-10-20 22:11:38,101 calibrate.py _range_qc_combined_nc():936 [1] Done range checking seabird25p INFO 2025-10-20 22:11:38,156 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_cal.nc INFO 2025-10-20 22:11:45,986 calibrate.py write_netcdf():3512 [1] Data variables written: depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_propRpm, tailcone_time, time INFO 2025-10-20 22:11:45,989 process.py align():251 [1] Alignment steps for 2018.094.00 INFO 2025-10-20 22:11:46,011 align.py process_cal():139 [1] Processing i2map_2018.094.00_cal.nc from /data/auv_data/i2map/missionnetcdfs/2018.094.00 INFO 2025-10-20 22:11:46,031 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 22:11:46,034 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 22:11:46,084 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 22:11:46,087 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 22:11:46,136 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 22:11:46,140 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 22:11:46,169 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-10-20 22:11:46,169 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-10-20 22:11:46,188 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-10-20 22:11:46,192 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 22:11:46,245 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,250 align.py process_cal():249 [1] seabird25p_temperature: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,317 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,322 align.py process_cal():249 [1] seabird25p_conductivity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,390 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,395 align.py process_cal():249 [1] seabird25p_salinity: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,462 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,467 align.py process_cal():249 [1] seabird25p_temperature_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,535 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,540 align.py process_cal():249 [1] seabird25p_conductivity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,608 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,613 align.py process_cal():249 [1] seabird25p_salinity_onboard: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,682 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,687 align.py process_cal():249 [1] seabird25p_dissolvedO2_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,753 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,758 align.py process_cal():249 [1] seabird25p_oxygen_mll_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,825 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,830 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_port: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,897 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,902 align.py process_cal():249 [1] seabird25p_dissolvedO2_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:46,970 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:46,975 align.py process_cal():249 [1] seabird25p_oxygen_mll_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:47,043 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:47,048 align.py process_cal():249 [1] seabird25p_oxygen_umolkg_stbd: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:47,115 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:47,120 align.py process_cal():249 [1] seabird25p_beam_transmittance: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:47,186 align.py process_cal():206 [1] Using pitch corrected seabird25p_depth: Variable depth_filtdepth from i2map_2018.094.00_cal.nc linearly interpolated to seabird25p_time and corrected for pitch using SensorOffset(x=4.04, y=0.0) INFO 2025-10-20 22:11:47,191 align.py process_cal():249 [1] seabird25p_depth: instrument_sample_rate_hz = 7.99 INFO 2025-10-20 22:11:47,265 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-10-20 22:11:47,300 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_align.nc INFO 2025-10-20 22:11:47,345 align.py write_netcdf():342 [1] Data variables written: navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, seabird25p_beam_transmittance, seabird25p_conductivity, seabird25p_conductivity_onboard, seabird25p_depth, seabird25p_dissolvedO2_port, seabird25p_dissolvedO2_stbd, seabird25p_latitude, seabird25p_longitude, seabird25p_oxygen_mll_port, seabird25p_oxygen_mll_stbd, seabird25p_oxygen_umolkg_port, seabird25p_oxygen_umolkg_stbd, seabird25p_salinity, seabird25p_salinity_onboard, seabird25p_temperature, seabird25p_temperature_onboard, seabird25p_time, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-10-20 22:11:47,347 process.py resample():273 [1] Resampling steps for 2018.094.00 INFO 2025-10-20 22:11:47,347 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-10-20 22:11:47,363 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_align.nc mission netCDF file INFO 2025-10-20 22:11:47,366 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_align.nc mission netCDF file INFO 2025-10-20 22:11:47,368 resample.py get_mission_start_end():1145 [1] navigation: 2018-04-04T16:10:04.157496320 to 2018-04-04T19:58:49.307259136 (0 days 00:00:00 before mission_end) INFO 2025-10-20 22:11:47,370 resample.py get_mission_start_end():1145 [1] seabird25p: 2018-04-04T16:09:37.729306624 to 2018-04-04T19:58:49.307259136 (0 days 00:00:00 before mission_end) INFO 2025-10-20 22:11:47,371 resample.py get_mission_start_end():1145 [1] tailcone : 2018-04-04T16:09:25.700130816 to 2018-04-04T19:58:07.100150528 (0 days 00:00:42.207108608 before mission_end) INFO 2025-10-20 22:11:47,372 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_align.nc mission netCDF file INFO 2025-10-20 22:11:47,373 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,573 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,600 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,626 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,651 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,687 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,722 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,759 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,796 resample.py resample_variable():1031 [1] Resampling seabird25p_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,833 resample.py resample_variable():1031 [1] Resampling seabird25p_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,871 resample.py resample_variable():1031 [1] Resampling seabird25p_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,912 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_port with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,956 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_port with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:47,999 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_port with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,042 resample.py resample_variable():1031 [1] Resampling seabird25p_dissolvedO2_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,083 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_mll_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,124 resample.py resample_variable():1031 [1] Resampling seabird25p_oxygen_umolkg_stbd with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,165 resample.py resample_variable():1031 [1] Resampling seabird25p_beam_transmittance with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,194 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-10-20 22:11:48,336 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_1S.nc INFO 2025-10-20 22:11:48,338 process.py archive():337 [1] Archiving steps for 2018.094.00 INFO 2025-10-20 22:11:48,338 process.py archive():347 [1] nc_file_base = /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00, BASE_PATH = /data/auv_data INFO 2025-10-20 22:11:48,339 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00 files to /Volumes/AUVCTD/surveys/2018/netcdf INFO 2025-10-20 22:11:48,341 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2018/netcdf/i2map_2018.094.00_1S.nc INFO 2025-10-20 22:11:48,354 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_1S.nc /Volumes/AUVCTD/surveys/2018/netcdf done. INFO 2025-10-20 22:11:48,355 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2018/netcdf/i2map_2018.094.00_cal.nc INFO 2025-10-20 22:11:48,418 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_cal.nc /Volumes/AUVCTD/surveys/2018/netcdf done. INFO 2025-10-20 22:11:48,419 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2018/netcdf/i2map_2018.094.00_align.nc INFO 2025-10-20 22:11:48,474 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_align.nc /Volumes/AUVCTD/surveys/2018/netcdf done. INFO 2025-10-20 22:11:48,483 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/gps.nc /Volumes/AUVCTD/missionnetcdfs/2018/2018094/2018.094.00 done. INFO 2025-10-20 22:11:48,545 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2018/2018094/2018.094.00 done. INFO 2025-10-20 22:11:48,566 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2018/2018094/2018.094.00 done. INFO 2025-10-20 22:11:48,602 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/seabird25p.nc /Volumes/AUVCTD/missionnetcdfs/2018/2018094/2018.094.00 done. INFO 2025-10-20 22:11:48,618 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2018/2018094/2018.094.00 done. INFO 2025-10-20 22:11:48,618 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-10-20 22:11:48,618 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/i2map/missionnetcdfs/2018.094.00/i2map_2018.094.00_processing.log /Volumes/AUVCTD/surveys/2018/netcdf