INFO 2025-06-26 15:52:06,449 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:52:06,450 process.py process_mission():434 [1] dorado_info[mission]["comment"] = ESP drifter missions out at station 67-70 with Flyer doing casts and ESP drifting south toward Davidson Seamount - no gulpers (Frederic sent me note about survey grouping) Faulty parosci lead to several mission depth aborts at beginning of this set of volume surveys - ctdToUse = ctd1 INFO 2025-06-26 15:52:06,450 process.py process_mission():449 [1] Processing AUVCTD mission 2010.259.00 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:52:06,450 process.py download_process():165 [1] Download and processing steps for 2010.259.00 INFO 2025-06-26 15:52:06,450 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010259/2010.259.00 INFO 2025-06-26 15:52:06,450 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010259/2010.259.00 to /data/auv_data/dorado/missionlogs/2010.259.00 INFO 2025-06-26 15:52:07,234 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.259.00 INFO 2025-06-26 15:52:07,234 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/ctdDriver.log (400907 bytes) INFO 2025-06-26 15:52:07,294 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/ctdDriver2.log (400799 bytes) INFO 2025-06-26 15:52:07,351 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/gps.log (25124 bytes) INFO 2025-06-26 15:52:07,365 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/hydroscatlog.log (356182 bytes) INFO 2025-06-26 15:52:07,407 logs2netcdfs.py _process_log_file():687 [1] Non-monotonic increasing time indices in /data/auv_data/dorado/missionlogs/2010.259.00/hydroscatlog.log: [782] INFO 2025-06-26 15:52:07,409 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/navigation.log (1203018 bytes) INFO 2025-06-26 15:52:07,506 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/isuslog.log (24693 bytes) INFO 2025-06-26 15:52:07,516 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/parosci.log (386582 bytes) INFO 2025-06-26 15:52:07,555 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/tailCone.log (254827 bytes) INFO 2025-06-26 15:52:07,595 logs2netcdfs.py download_process_logs():807 [1] Time to process: 0.36 seconds INFO 2025-06-26 15:52:07,595 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.259.00/lopc.bin (1079000 bytes) INFO 2025-06-26 15:52:07,595 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:52:07 2025 INFO 2025-06-26 15:52:07,595 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.259.00/parosci.nc INFO 2025-06-26 15:52:07,595 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:52:07,595 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.259.00/parosci.nc INFO 2025-06-26 15:52:07,597 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284664091.1, sensor_off_time = 1284665158.8 INFO 2025-06-26 15:52:07,597 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 1067 seconds. Expecting to read 2134 L frames from the lopc.bin file. INFO 2025-06-26 15:52:07,597 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 2134 records from the lopc.bin file. INFO 2025-06-26 15:52:07,611 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-09-16 19:08:11 Z and endTime = 2010-09-16 19:25:58 Z with 2134 records expected to be read from lopc.bin INFO 2025-06-26 15:52:07,611 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.259.00/lopc.bin INFO 2025-06-26 15:52:07,611 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.259.00/lopc.nc INFO 2025-06-26 15:52:07,611 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.259.00/lopc.nc INFO 2025-06-26 15:52:07,612 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.259.00 INFO 2025-06-26 15:52:07,612 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 WARNING 2025-06-26 15:52:07,615 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = A01487487 WARNING 2025-06-26 15:52:07,615 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = INFO 2025-06-26 15:52:07,705 lopcToNetCDF.py unpackLOPCbin():951 [1] L Frames sample M Frames ShortLFrame LBeforeMEnd MBeforeLEnd UnknownFrame Garbled L INFO 2025-06-26 15:52:07,705 lopcToNetCDF.py unpackLOPCbin():969 [1] Count Count Count Error Error Error Error Error INFO 2025-06-26 15:52:07,705 lopcToNetCDF.py unpackLOPCbin():987 [1] -------- -------- -------- ----------- ----------- ----------- ----------- ------------ INFO 2025-06-26 15:52:08,920 lopcToNetCDF.py main():2345 [1] >>> Done reading file. INFO 2025-06-26 15:52:08,920 lopcToNetCDF.py main():2346 [1] lFrameCount = 2140, mFrameCount = 3361 INFO 2025-06-26 15:52:08,921 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.259.00/parosci.nc INFO 2025-06-26 15:52:08,921 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:52:08,921 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.259.00/parosci.nc INFO 2025-06-26 15:52:08,923 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284664091.1, sensor_off_time = 1284665158.8 INFO 2025-06-26 15:52:08,923 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 1067 seconds. Expecting to read 2134 L frames from the lopc.bin file. INFO 2025-06-26 15:52:08,923 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 2134 records from the lopc.bin file. INFO 2025-06-26 15:52:08,923 lopcToNetCDF.py constructTimestampList():1340 [1] Calling correctSampleCountList() with sampleCountList[0] = 4161 and len(sampleCountList) = 2140 INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py correctSampleCountList():1737 [1] Found overflows at indices: [] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py correctSampleCountList():1745 [1] Original sampleCountList = [ 4161 4162 4163 ... 57367 57368 57369] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py correctSampleCountList():1746 [1] Found 0 0 values at indices: [] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py correctSampleCountList():1779 [1] Found 0 stuck values at indices: [] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py deSpike():1588 [1] d_sampleCountList = [1 1 1 ... 1 1 1] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py deSpike():1590 [1] Found 1 spike indicators at indices: [5] INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py deSpike():1595 [1] Identifying nature of spike value = 55235 at index = 5 INFO 2025-06-26 15:52:08,924 lopcToNetCDF.py deSpike():1714 [1] This is the last element in spike_indx. No need to deSpike(). INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py correctSampleCountList():1805 [1] After despike() sampleCountList = [ 4161 4162 4163 ... 57367 57368 57369] INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py constructTimestampList():1347 [1] correctSampleCountList() returned correctedSampleCountList = [ 4161 4162 4163 ... 57367 57368 57369] with len(correctedSampleCountList) = 2140 INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py constructTimestampList():1358 [1] Subtracting 4161 from all values of correctedSampleCountList INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py constructTimestampList():1363 [1] Constructing timestampArray from instrument corrected sampleCount and constant deltaT = 0.500000 INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py constructTimestampList():1368 [1] New re-zeroed correctedSampleCountList = [0.00000e+00 5.00000e-01 1.00000e+00 ... 2.66030e+04 2.66035e+04 2.66040e+04] INFO 2025-06-26 15:52:08,925 lopcToNetCDF.py constructTimestampList():1379 [1] timestampArray = [1.28466409e+09 1.28466409e+09 1.28466409e+09 ... 1.28469069e+09 1.28469069e+09 1.28469070e+09] INFO 2025-06-26 15:52:08,926 lopcToNetCDF.py constructTimestampList():1380 [1] timestampArray[:2] = [1284664091.1 1284664091.6, ..., timestampArray[-2:] = 1284690694.6 1284690695.1] INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1389 [1] timestampList[:2] = [np.float64(1284664091.1393142), np.float64(1284664091.6393142)], ..., timestampList[-2:] = [np.float64(1284690694.6393142), np.float64(1284690695.1393142)]] INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1394 [1] Subsampling correctedSampleCountList (len = 2140) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1399 [1] lFrameCountWrittenList[:2] = [20, 41], ... lFrameCountWrittenList[-2:] = [2099, 2120] INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1420 [1] len(subSampledCorrectedSampleCountList) = 101 INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1439 [1] len(timestampList) = 2140 INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1440 [1] timestampList[:2] = [np.float64(1284664091.1393142), np.float64(1284664091.6393142)], ..., timestampList[-2:] = [np.float64(1284690694.6393142), np.float64(1284690695.1393142)]] INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1446 [1] Subsampling timestampList (len = 2140) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1457 [1] Taking indices [[np.int32(19), np.int32(40)] ... [np.int32(2098), np.int32(2119)]] from timestampList to create subSampledTimestampList INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1463 [1] len(subSampledTimestampList) = 101 INFO 2025-06-26 15:52:08,928 lopcToNetCDF.py constructTimestampList():1477 [1] Finding elements of cFrameEsecsList that != -9999 INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2096 [1] Writing time axis for len(tsList) = 101 INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2099 [1] tsList[:1] = [np.float64(1284689635.1393142)], ..., tsList[-2:] = [np.float64(1284690674.6393142), np.float64(1284690685.1393142)] INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2100 [1] Begin time = 2010-09-17 02:13:55 Z INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2103 [1] End time = 2010-09-17 02:31:25 Z INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2107 [1] Writing time axis for len(cFrameEsecsList) = 101 INFO 2025-06-26 15:52:08,931 lopcToNetCDF.py closeNetCDFFile():2111 [1] cFrameEsecsList[:1] = [1.28466516e+09], ..., cFrameEsecsList[-2:] = [1.28466516e+09 1.28466516e+09] INFO 2025-06-26 15:52:08,932 lopcToNetCDF.py closeNetCDFFile():2116 [1] Begin time = 2010-09-16 19:25:55 Z INFO 2025-06-26 15:52:08,932 lopcToNetCDF.py closeNetCDFFile():2120 [1] End time = 2010-09-16 19:25:55 Z INFO 2025-06-26 15:52:08,935 lopcToNetCDF.py main():2381 [1] Created file: /data/auv_data/dorado/missionnetcdfs/2010.259.00/lopc.nc INFO 2025-06-26 15:52:08,936 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 15:52:08 2025 Elapsed processing time from start of processing = 1 seconds INFO 2025-06-26 15:52:08,936 process.py calibrate():227 [1] Calibration steps for 2010.259.00 INFO 2025-06-26 15:52:09,001 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:52:09,003 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:52:10,151 calibrate.py _nudge_pos():1806 [1] 163: 0.140 0.0001467 -0.0012795 3665 12.23 1.797 -19.387 2010-09-16T19:23:04.928085504 INFO 2025-06-26 15:52:11,802 calibrate.py _nudge_pos():1862 [1] 287: - - - 5 0.01 - - INFO 2025-06-26 15:52:11,802 calibrate.py _nudge_pos():1868 [1] Points in final series = 5089 WARNING 2025-06-26 15:52:11,812 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 7.69 Hz INFO 2025-06-26 15:52:12,393 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 10 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:52:12,453 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 25 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:52:12,488 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 25 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:52:12,489 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.259.00/ctd1.nc INFO 2025-06-26 15:52:12,490 calibrate.py _range_qc_combined_nc():898 [1] Setting 14 ctd1_salinity values to NaN INFO 2025-06-26 15:52:12,491 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:52:12,491 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:52:12,556 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 26 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:52:12,592 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 26 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:52:12,593 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.259.00/ctd2.nc INFO 2025-06-26 15:52:12,595 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:52:12,595 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:52:12,595 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:52:12,602 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.259.00 ERROR 2025-06-26 15:52:12,610 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.259.00 INFO 2025-06-26 15:52:12,618 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_cal.nc INFO 2025-06-26 15:52:12,663 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_flowSpeed, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:52:12,667 process.py align():251 [1] Alignment steps for 2010.259.00 INFO 2025-06-26 15:52:12,690 align.py process_cal():139 [1] Processing dorado_2010.259.00_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.259.00 INFO 2025-06-26 15:52:12,695 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:52:12,697 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 4.99 INFO 2025-06-26 15:52:12,709 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:52:12,710 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 4.99 INFO 2025-06-26 15:52:12,722 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:52:12,724 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 4.99 INFO 2025-06-26 15:52:12,731 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:52:12,731 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:52:12,736 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:52:12,737 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 4.99 INFO 2025-06-26 15:52:12,748 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,750 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,761 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,762 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,775 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,777 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,788 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,790 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,801 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,803 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,814 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,815 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,827 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,829 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,841 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,843 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,854 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,856 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,871 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,873 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,884 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,886 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,898 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,900 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,911 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,912 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,923 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,925 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,936 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,938 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,949 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,951 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,963 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,965 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,976 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,978 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:12,990 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:12,991 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:13,003 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:13,005 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:13,017 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:13,019 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:13,030 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.259.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:52:13,032 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:52:13,049 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:52:13,062 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:52:13,076 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:52:13,090 align.py process_cal():249 [1] lopc_countListSum: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:52:13,104 align.py process_cal():249 [1] lopc_transCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:52:13,117 align.py process_cal():249 [1] lopc_nonTransCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:52:13,131 align.py process_cal():249 [1] lopc_LCcount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:52:13,144 align.py process_cal():249 [1] lopc_flowSpeed: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:52:13,159 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 4.96 INFO 2025-06-26 15:52:13,171 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_align.nc INFO 2025-06-26 15:52:13,217 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_depth, lopc_flowSpeed, lopc_latitude, lopc_longitude, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:52:13,219 process.py resample():273 [1] Resampling steps for 2010.259.00 INFO 2025-06-26 15:52:13,220 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:52:13,241 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_align.nc mission netCDF file INFO 2025-06-26 15:52:13,245 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_align.nc mission netCDF file INFO 2025-06-26 15:52:13,246 resample.py get_mission_start_end():1145 [1] navigation: 2010-09-16T19:08:59.745984512 to 2010-09-16T19:25:58.926165760 (0 days 07:05:26.213148416 before mission_end) WARNING 2025-06-26 15:52:13,247 resample.py get_mission_start_end():1156 [1] Instrument navigation has a gap > 5 minutes at the end of the mission: 0 days 07:05:26.213148416 INFO 2025-06-26 15:52:13,248 resample.py get_mission_start_end():1145 [1] hs2 : 2010-09-16T19:08:22.048566784 to 2010-09-16T19:25:58.886168576 (0 days 07:05:26.253145600 before mission_end) WARNING 2025-06-26 15:52:13,249 resample.py get_mission_start_end():1156 [1] Instrument hs2 has a gap > 5 minutes at the end of the mission: 0 days 07:05:26.253145600 INFO 2025-06-26 15:52:13,250 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-09-16T19:08:36.917548544 to 2010-09-16T19:25:58.886168576 (0 days 07:05:26.253145600 before mission_end) WARNING 2025-06-26 15:52:13,250 resample.py get_mission_start_end():1156 [1] Instrument ctd1 has a gap > 5 minutes at the end of the mission: 0 days 07:05:26.253145600 INFO 2025-06-26 15:52:13,251 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-09-16T19:08:37.157531904 to 2010-09-16T19:25:58.876169216 (0 days 07:05:26.263144960 before mission_end) WARNING 2025-06-26 15:52:13,252 resample.py get_mission_start_end():1156 [1] Instrument ctd2 has a gap > 5 minutes at the end of the mission: 0 days 07:05:26.263144960 INFO 2025-06-26 15:52:13,253 resample.py get_mission_start_end():1145 [1] isus : 2010-09-16T19:09:29.373954816 to 2010-09-16T19:25:57.626254848 (0 days 07:05:27.513059328 before mission_end) WARNING 2025-06-26 15:52:13,254 resample.py get_mission_start_end():1156 [1] Instrument isus has a gap > 5 minutes at the end of the mission: 0 days 07:05:27.513059328 INFO 2025-06-26 15:52:13,255 resample.py get_mission_start_end():1145 [1] lopc : 2010-09-17T02:13:55.139314176 to 2010-09-17T02:31:25.139314176 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:52:13,256 resample.py get_mission_start_end():1145 [1] tailcone : 2010-09-16T19:08:10.729342208 to 2010-09-16T19:25:58.716180224 (0 days 07:05:26.423133952 before mission_end) WARNING 2025-06-26 15:52:13,257 resample.py get_mission_start_end():1156 [1] Instrument tailcone has a gap > 5 minutes at the end of the mission: 0 days 07:05:26.423133952 INFO 2025-06-26 15:52:13,257 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_align.nc mission netCDF file INFO 2025-06-26 15:52:13,257 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,295 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,295 resample.py resample_variable():1038 [1] Padding navigation_roll with 0 days 07:05:26.213148416 of NaNs to the end of mission INFO 2025-06-26 15:52:13,306 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,306 resample.py resample_variable():1038 [1] Padding navigation_pitch with 0 days 07:05:26.213148416 of NaNs to the end of mission INFO 2025-06-26 15:52:13,316 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,316 resample.py resample_variable():1038 [1] Padding navigation_yaw with 0 days 07:05:26.213148416 of NaNs to the end of mission INFO 2025-06-26 15:52:13,327 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,327 resample.py resample_variable():1038 [1] Padding navigation_mWaterSpeed with 0 days 07:05:26.213148416 of NaNs to the end of mission INFO 2025-06-26 15:52:13,337 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,337 resample.py resample_variable():1038 [1] Padding hs2_bbp420 with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,347 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,348 resample.py resample_variable():1038 [1] Padding hs2_bbp700 with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,357 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,358 resample.py resample_variable():1038 [1] Padding hs2_fl700 with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,367 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,367 resample.py resample_variable():1038 [1] Padding ctd1_temperature with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,377 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,377 resample.py resample_variable():1038 [1] Padding ctd1_conductivity with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,386 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,386 resample.py resample_variable():1038 [1] Padding ctd1_salinity with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,395 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,395 resample.py resample_variable():1038 [1] Padding ctd1_temperature_onboard with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,405 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,405 resample.py resample_variable():1038 [1] Padding ctd1_conductivity_onboard with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,414 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,414 resample.py resample_variable():1038 [1] Padding ctd1_salinity_onboard with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,423 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,423 resample.py resample_variable():1038 [1] Padding ctd1_dissolvedO2 with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,432 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,432 resample.py resample_variable():1038 [1] Padding ctd1_oxygen_mll with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,441 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,441 resample.py resample_variable():1038 [1] Padding ctd1_oxygen_umolkg with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,450 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,450 resample.py resample_variable():1038 [1] Padding ctd1_flow1 with 0 days 07:05:26.253145600 of NaNs to the end of mission INFO 2025-06-26 15:52:13,461 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,461 resample.py resample_variable():1038 [1] Padding ctd2_temperature with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,471 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,472 resample.py resample_variable():1038 [1] Padding ctd2_conductivity with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,481 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,481 resample.py resample_variable():1038 [1] Padding ctd2_salinity with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,491 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,491 resample.py resample_variable():1038 [1] Padding ctd2_temperature_onboard with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,501 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,501 resample.py resample_variable():1038 [1] Padding ctd2_conductivity_onboard with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,511 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,511 resample.py resample_variable():1038 [1] Padding ctd2_salinity_onboard with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,521 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,521 resample.py resample_variable():1038 [1] Padding ctd2_flow2 with 0 days 07:05:26.263144960 of NaNs to the end of mission INFO 2025-06-26 15:52:13,531 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,531 resample.py resample_variable():1038 [1] Padding isus_nitrate with 0 days 07:05:27.513059328 of NaNs to the end of mission INFO 2025-06-26 15:52:13,540 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,540 resample.py resample_variable():1038 [1] Padding isus_temp with 0 days 07:05:27.513059328 of NaNs to the end of mission INFO 2025-06-26 15:52:13,549 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,549 resample.py resample_variable():1038 [1] Padding isus_quality with 0 days 07:05:27.513059328 of NaNs to the end of mission INFO 2025-06-26 15:52:13,562 resample.py resample_variable():1031 [1] Resampling lopc_countListSum with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,574 resample.py resample_variable():1031 [1] Resampling lopc_transCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,582 resample.py resample_variable():1031 [1] Resampling lopc_nonTransCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,590 resample.py resample_variable():1031 [1] Resampling lopc_LCcount with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,597 resample.py resample_variable():1031 [1] Resampling lopc_flowSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,608 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:52:13,608 resample.py resample_variable():1038 [1] Padding tailcone_propRpm with 0 days 07:05:26.423133952 of NaNs to the end of mission INFO 2025-06-26 15:52:13,722 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_1S.nc INFO 2025-06-26 15:52:14,448 create_products.py gulper_odv():401 [1] No gulper times found for 2010.259.00 INFO 2025-06-26 15:52:14,449 process.py archive():337 [1] Archiving steps for 2010.259.00 INFO 2025-06-26 15:52:14,449 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00, BASE_PATH = /data/auv_data INFO 2025-06-26 15:52:14,449 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:52:14,450 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.259.00_1S.nc INFO 2025-06-26 15:52:14,457 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:52:14,458 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.259.00_cal.nc INFO 2025-06-26 15:52:14,470 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:52:14,471 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.259.00_align.nc INFO 2025-06-26 15:52:14,482 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:52:14,489 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,496 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,500 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,506 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,514 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,518 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,524 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,531 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,541 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010259/2010.259.00 done. INFO 2025-06-26 15:52:14,541 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:52:14,541 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.259.00/dorado_2010.259.00_processing.log /Volumes/AUVCTD/surveys/2010/netcdf