INFO 2025-06-26 15:49:37,950 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:49:37,950 process.py process_mission():434 [1] dorado_info[mission]["comment"] = ESP drifter missions out at station 67-70 with Flyer doing casts and ESP drifting south toward Davidson Seamount - no gulpers (Frederic sent me note about survey grouping) Faulty parosci lead to several mission depth aborts at beginning of this set of volume surveys - ctdToUse = ctd1 INFO 2025-06-26 15:49:37,950 process.py process_mission():449 [1] Processing AUVCTD mission 2010.258.04 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:49:37,950 process.py download_process():165 [1] Download and processing steps for 2010.258.04 INFO 2025-06-26 15:49:37,950 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010258/2010.258.04 INFO 2025-06-26 15:49:37,950 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010258/2010.258.04 to /data/auv_data/dorado/missionlogs/2010.258.04 INFO 2025-06-26 15:49:38,493 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.258.04 INFO 2025-06-26 15:49:38,493 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/ctdDriver.log (57707 bytes) INFO 2025-06-26 15:49:38,505 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/ctdDriver2.log (57791 bytes) INFO 2025-06-26 15:49:38,516 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/gps.log (10220 bytes) INFO 2025-06-26 15:49:38,524 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/hydroscatlog.log (57142 bytes) INFO 2025-06-26 15:49:38,539 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/navigation.log (153290 bytes) INFO 2025-06-26 15:49:38,564 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/isuslog.log (2709 bytes) INFO 2025-06-26 15:49:38,568 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/parosci.log (58550 bytes) INFO 2025-06-26 15:49:38,578 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/tailCone.log (41803 bytes) INFO 2025-06-26 15:49:38,590 logs2netcdfs.py download_process_logs():807 [1] Time to process: 0.10 seconds INFO 2025-06-26 15:49:38,590 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.258.04/lopc.bin (235000 bytes) INFO 2025-06-26 15:49:38,590 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:49:38 2025 INFO 2025-06-26 15:49:38,590 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.258.04/parosci.nc INFO 2025-06-26 15:49:38,590 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:49:38,590 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.258.04/parosci.nc INFO 2025-06-26 15:49:38,591 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284538726.2, sensor_off_time = 1284538902.4 INFO 2025-06-26 15:49:38,592 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 176 seconds. Expecting to read 352 L frames from the lopc.bin file. INFO 2025-06-26 15:49:38,592 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 352 records from the lopc.bin file. INFO 2025-06-26 15:49:38,594 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-09-15 08:18:46 Z and endTime = 2010-09-15 08:21:42 Z with 352 records expected to be read from lopc.bin INFO 2025-06-26 15:49:38,594 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.258.04/lopc.bin INFO 2025-06-26 15:49:38,594 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.258.04/lopc.nc INFO 2025-06-26 15:49:38,594 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.258.04/lopc.nc INFO 2025-06-26 15:49:38,595 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.258.04 INFO 2025-06-26 15:49:38,595 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 WARNING 2025-06-26 15:49:38,597 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = A0520411 WARNING 2025-06-26 15:49:38,597 lopcToNetCDF.py readCframeData():665 [1] Unable to parse a float from the string cstr[:70] = INFO 2025-06-26 15:49:38,665 lopcToNetCDF.py unpackLOPCbin():951 [1] L Frames sample M Frames ShortLFrame LBeforeMEnd MBeforeLEnd UnknownFrame Garbled L INFO 2025-06-26 15:49:38,665 lopcToNetCDF.py unpackLOPCbin():969 [1] Count Count Count Error Error Error Error Error INFO 2025-06-26 15:49:38,665 lopcToNetCDF.py unpackLOPCbin():987 [1] -------- -------- -------- ----------- ----------- ----------- ----------- ------------ INFO 2025-06-26 15:49:38,914 lopcToNetCDF.py main():2345 [1] >>> Done reading file. INFO 2025-06-26 15:49:38,914 lopcToNetCDF.py main():2346 [1] lFrameCount = 361, mFrameCount = 861 INFO 2025-06-26 15:49:38,915 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.258.04/parosci.nc INFO 2025-06-26 15:49:38,915 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:49:38,915 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.258.04/parosci.nc INFO 2025-06-26 15:49:38,916 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1284538726.2, sensor_off_time = 1284538902.4 INFO 2025-06-26 15:49:38,917 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 176 seconds. Expecting to read 352 L frames from the lopc.bin file. INFO 2025-06-26 15:49:38,917 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 352 records from the lopc.bin file. INFO 2025-06-26 15:49:38,917 lopcToNetCDF.py constructTimestampList():1340 [1] Calling correctSampleCountList() with sampleCountList[0] = 46543 and len(sampleCountList) = 361 INFO 2025-06-26 15:49:38,917 lopcToNetCDF.py correctSampleCountList():1737 [1] Found overflows at indices: [] INFO 2025-06-26 15:49:38,917 lopcToNetCDF.py correctSampleCountList():1745 [1] Original sampleCountList = [46543 46544 46545 46546 46547 46548 48053 48054 48055 48056 48057 48058 48059 48060 48061 48062 48063 48064 48065 48066 48067 48068 48069 48070 48071 48072 48073 48074 48075 48076 48077 48078 48079 48080 48081 48082 48083 48084 48085 48086 48087 48088 48089 48090 48091 48092 48093 48094 48095 48096 48097 48098 48099 48100 48101 48102 48103 48104 48105 48106 48107 48108 48109 48110 48111 48112 48113 48114 48115 48116 48117 48118 48119 48120 48121 48122 48123 48124 48125 48126 48127 48128 48129 48130 48131 48132 48133 48134 48135 48136 48137 48138 48139 48140 48141 48142 48143 48144 48145 48146 48147 48148 48149 48150 48151 48152 48153 48154 48155 48156 48157 48158 48159 48160 48161 48162 48163 48164 48165 48166 48167 48168 48169 48170 48171 48172 48173 48174 48175 48176 48177 48178 48179 48180 48181 48182 48183 48184 48185 48186 48187 48188 48189 48190 48191 48192 48193 48194 48195 48196 48197 48198 48199 48200 48201 48202 48203 48204 48205 48206 48207 48208 48209 48210 48211 48212 48213 48214 48215 48216 48217 48218 48219 48220 48221 48222 48223 48224 48225 48226 48227 48228 48229 48230 48231 48232 48233 48234 48235 48236 48237 48238 48239 48240 48241 48242 48243 48244 48245 48246 48247 48248 48249 48250 48251 48252 48253 48254 48255 48256 48257 48258 48259 48260 48261 48262 48263 48264 48265 48266 48267 48268 48269 48270 48271 48272 48273 48274 48275 48276 48277 48278 48279 48280 48281 48282 48283 48284 48285 48286 48287 48288 48289 48290 48291 48292 48293 48294 48295 48296 48297 48298 48299 48300 48301 48302 48303 48304 48305 48306 48307 48308 48309 48310 48311 48312 48313 48314 48315 48316 48317 48318 48319 48320 48321 48322 48323 48324 48325 48326 48327 48328 48329 48330 48331 48332 48333 48334 48335 48336 48337 48338 48339 48340 48341 48342 48343 48344 48345 48346 48347 48348 48349 48350 48351 48352 48353 48354 48355 48356 48357 48358 48359 48360 48361 48362 48363 48364 48365 48366 48367 48368 48369 48370 48371 48372 48373 48374 48375 48376 48377 48378 48379 48380 48381 48382 48383 48384 48385 48386 48387 48388 48389 48390 48391 48392 48393 48394 48395 48396 48397 48398 48399 48400 48401 48402 48403 48404 48405 48406 48407] INFO 2025-06-26 15:49:38,918 lopcToNetCDF.py correctSampleCountList():1746 [1] Found 0 0 values at indices: [] INFO 2025-06-26 15:49:38,919 lopcToNetCDF.py correctSampleCountList():1779 [1] Found 0 stuck values at indices: [] INFO 2025-06-26 15:49:38,919 lopcToNetCDF.py deSpike():1588 [1] d_sampleCountList = [ 1 1 1 1 1 1505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1] INFO 2025-06-26 15:49:38,920 lopcToNetCDF.py deSpike():1590 [1] Found 1 spike indicators at indices: [6] INFO 2025-06-26 15:49:38,920 lopcToNetCDF.py deSpike():1595 [1] Identifying nature of spike value = 48053 at index = 6 INFO 2025-06-26 15:49:38,920 lopcToNetCDF.py deSpike():1714 [1] This is the last element in spike_indx. No need to deSpike(). INFO 2025-06-26 15:49:38,920 lopcToNetCDF.py correctSampleCountList():1805 [1] After despike() sampleCountList = [46543 46544 46545 46546 46547 46548 48053 48054 48055 48056 48057 48058 48059 48060 48061 48062 48063 48064 48065 48066 48067 48068 48069 48070 48071 48072 48073 48074 48075 48076 48077 48078 48079 48080 48081 48082 48083 48084 48085 48086 48087 48088 48089 48090 48091 48092 48093 48094 48095 48096 48097 48098 48099 48100 48101 48102 48103 48104 48105 48106 48107 48108 48109 48110 48111 48112 48113 48114 48115 48116 48117 48118 48119 48120 48121 48122 48123 48124 48125 48126 48127 48128 48129 48130 48131 48132 48133 48134 48135 48136 48137 48138 48139 48140 48141 48142 48143 48144 48145 48146 48147 48148 48149 48150 48151 48152 48153 48154 48155 48156 48157 48158 48159 48160 48161 48162 48163 48164 48165 48166 48167 48168 48169 48170 48171 48172 48173 48174 48175 48176 48177 48178 48179 48180 48181 48182 48183 48184 48185 48186 48187 48188 48189 48190 48191 48192 48193 48194 48195 48196 48197 48198 48199 48200 48201 48202 48203 48204 48205 48206 48207 48208 48209 48210 48211 48212 48213 48214 48215 48216 48217 48218 48219 48220 48221 48222 48223 48224 48225 48226 48227 48228 48229 48230 48231 48232 48233 48234 48235 48236 48237 48238 48239 48240 48241 48242 48243 48244 48245 48246 48247 48248 48249 48250 48251 48252 48253 48254 48255 48256 48257 48258 48259 48260 48261 48262 48263 48264 48265 48266 48267 48268 48269 48270 48271 48272 48273 48274 48275 48276 48277 48278 48279 48280 48281 48282 48283 48284 48285 48286 48287 48288 48289 48290 48291 48292 48293 48294 48295 48296 48297 48298 48299 48300 48301 48302 48303 48304 48305 48306 48307 48308 48309 48310 48311 48312 48313 48314 48315 48316 48317 48318 48319 48320 48321 48322 48323 48324 48325 48326 48327 48328 48329 48330 48331 48332 48333 48334 48335 48336 48337 48338 48339 48340 48341 48342 48343 48344 48345 48346 48347 48348 48349 48350 48351 48352 48353 48354 48355 48356 48357 48358 48359 48360 48361 48362 48363 48364 48365 48366 48367 48368 48369 48370 48371 48372 48373 48374 48375 48376 48377 48378 48379 48380 48381 48382 48383 48384 48385 48386 48387 48388 48389 48390 48391 48392 48393 48394 48395 48396 48397 48398 48399 48400 48401 48402 48403 48404 48405 48406 48407] INFO 2025-06-26 15:49:38,921 lopcToNetCDF.py constructTimestampList():1347 [1] correctSampleCountList() returned correctedSampleCountList = [46543 46544 46545 46546 46547 46548 48053 48054 48055 48056 48057 48058 48059 48060 48061 48062 48063 48064 48065 48066 48067 48068 48069 48070 48071 48072 48073 48074 48075 48076 48077 48078 48079 48080 48081 48082 48083 48084 48085 48086 48087 48088 48089 48090 48091 48092 48093 48094 48095 48096 48097 48098 48099 48100 48101 48102 48103 48104 48105 48106 48107 48108 48109 48110 48111 48112 48113 48114 48115 48116 48117 48118 48119 48120 48121 48122 48123 48124 48125 48126 48127 48128 48129 48130 48131 48132 48133 48134 48135 48136 48137 48138 48139 48140 48141 48142 48143 48144 48145 48146 48147 48148 48149 48150 48151 48152 48153 48154 48155 48156 48157 48158 48159 48160 48161 48162 48163 48164 48165 48166 48167 48168 48169 48170 48171 48172 48173 48174 48175 48176 48177 48178 48179 48180 48181 48182 48183 48184 48185 48186 48187 48188 48189 48190 48191 48192 48193 48194 48195 48196 48197 48198 48199 48200 48201 48202 48203 48204 48205 48206 48207 48208 48209 48210 48211 48212 48213 48214 48215 48216 48217 48218 48219 48220 48221 48222 48223 48224 48225 48226 48227 48228 48229 48230 48231 48232 48233 48234 48235 48236 48237 48238 48239 48240 48241 48242 48243 48244 48245 48246 48247 48248 48249 48250 48251 48252 48253 48254 48255 48256 48257 48258 48259 48260 48261 48262 48263 48264 48265 48266 48267 48268 48269 48270 48271 48272 48273 48274 48275 48276 48277 48278 48279 48280 48281 48282 48283 48284 48285 48286 48287 48288 48289 48290 48291 48292 48293 48294 48295 48296 48297 48298 48299 48300 48301 48302 48303 48304 48305 48306 48307 48308 48309 48310 48311 48312 48313 48314 48315 48316 48317 48318 48319 48320 48321 48322 48323 48324 48325 48326 48327 48328 48329 48330 48331 48332 48333 48334 48335 48336 48337 48338 48339 48340 48341 48342 48343 48344 48345 48346 48347 48348 48349 48350 48351 48352 48353 48354 48355 48356 48357 48358 48359 48360 48361 48362 48363 48364 48365 48366 48367 48368 48369 48370 48371 48372 48373 48374 48375 48376 48377 48378 48379 48380 48381 48382 48383 48384 48385 48386 48387 48388 48389 48390 48391 48392 48393 48394 48395 48396 48397 48398 48399 48400 48401 48402 48403 48404 48405 48406 48407] with len(correctedSampleCountList) = 361 INFO 2025-06-26 15:49:38,923 lopcToNetCDF.py constructTimestampList():1358 [1] Subtracting 46543 from all values of correctedSampleCountList INFO 2025-06-26 15:49:38,923 lopcToNetCDF.py constructTimestampList():1363 [1] Constructing timestampArray from instrument corrected sampleCount and constant deltaT = 0.500000 INFO 2025-06-26 15:49:38,923 lopcToNetCDF.py constructTimestampList():1368 [1] New re-zeroed correctedSampleCountList = [0.000e+00 5.000e-01 1.000e+00 1.500e+00 2.000e+00 2.500e+00 7.550e+02 7.555e+02 7.560e+02 7.565e+02 7.570e+02 7.575e+02 7.580e+02 7.585e+02 7.590e+02 7.595e+02 7.600e+02 7.605e+02 7.610e+02 7.615e+02 7.620e+02 7.625e+02 7.630e+02 7.635e+02 7.640e+02 7.645e+02 7.650e+02 7.655e+02 7.660e+02 7.665e+02 7.670e+02 7.675e+02 7.680e+02 7.685e+02 7.690e+02 7.695e+02 7.700e+02 7.705e+02 7.710e+02 7.715e+02 7.720e+02 7.725e+02 7.730e+02 7.735e+02 7.740e+02 7.745e+02 7.750e+02 7.755e+02 7.760e+02 7.765e+02 7.770e+02 7.775e+02 7.780e+02 7.785e+02 7.790e+02 7.795e+02 7.800e+02 7.805e+02 7.810e+02 7.815e+02 7.820e+02 7.825e+02 7.830e+02 7.835e+02 7.840e+02 7.845e+02 7.850e+02 7.855e+02 7.860e+02 7.865e+02 7.870e+02 7.875e+02 7.880e+02 7.885e+02 7.890e+02 7.895e+02 7.900e+02 7.905e+02 7.910e+02 7.915e+02 7.920e+02 7.925e+02 7.930e+02 7.935e+02 7.940e+02 7.945e+02 7.950e+02 7.955e+02 7.960e+02 7.965e+02 7.970e+02 7.975e+02 7.980e+02 7.985e+02 7.990e+02 7.995e+02 8.000e+02 8.005e+02 8.010e+02 8.015e+02 8.020e+02 8.025e+02 8.030e+02 8.035e+02 8.040e+02 8.045e+02 8.050e+02 8.055e+02 8.060e+02 8.065e+02 8.070e+02 8.075e+02 8.080e+02 8.085e+02 8.090e+02 8.095e+02 8.100e+02 8.105e+02 8.110e+02 8.115e+02 8.120e+02 8.125e+02 8.130e+02 8.135e+02 8.140e+02 8.145e+02 8.150e+02 8.155e+02 8.160e+02 8.165e+02 8.170e+02 8.175e+02 8.180e+02 8.185e+02 8.190e+02 8.195e+02 8.200e+02 8.205e+02 8.210e+02 8.215e+02 8.220e+02 8.225e+02 8.230e+02 8.235e+02 8.240e+02 8.245e+02 8.250e+02 8.255e+02 8.260e+02 8.265e+02 8.270e+02 8.275e+02 8.280e+02 8.285e+02 8.290e+02 8.295e+02 8.300e+02 8.305e+02 8.310e+02 8.315e+02 8.320e+02 8.325e+02 8.330e+02 8.335e+02 8.340e+02 8.345e+02 8.350e+02 8.355e+02 8.360e+02 8.365e+02 8.370e+02 8.375e+02 8.380e+02 8.385e+02 8.390e+02 8.395e+02 8.400e+02 8.405e+02 8.410e+02 8.415e+02 8.420e+02 8.425e+02 8.430e+02 8.435e+02 8.440e+02 8.445e+02 8.450e+02 8.455e+02 8.460e+02 8.465e+02 8.470e+02 8.475e+02 8.480e+02 8.485e+02 8.490e+02 8.495e+02 8.500e+02 8.505e+02 8.510e+02 8.515e+02 8.520e+02 8.525e+02 8.530e+02 8.535e+02 8.540e+02 8.545e+02 8.550e+02 8.555e+02 8.560e+02 8.565e+02 8.570e+02 8.575e+02 8.580e+02 8.585e+02 8.590e+02 8.595e+02 8.600e+02 8.605e+02 8.610e+02 8.615e+02 8.620e+02 8.625e+02 8.630e+02 8.635e+02 8.640e+02 8.645e+02 8.650e+02 8.655e+02 8.660e+02 8.665e+02 8.670e+02 8.675e+02 8.680e+02 8.685e+02 8.690e+02 8.695e+02 8.700e+02 8.705e+02 8.710e+02 8.715e+02 8.720e+02 8.725e+02 8.730e+02 8.735e+02 8.740e+02 8.745e+02 8.750e+02 8.755e+02 8.760e+02 8.765e+02 8.770e+02 8.775e+02 8.780e+02 8.785e+02 8.790e+02 8.795e+02 8.800e+02 8.805e+02 8.810e+02 8.815e+02 8.820e+02 8.825e+02 8.830e+02 8.835e+02 8.840e+02 8.845e+02 8.850e+02 8.855e+02 8.860e+02 8.865e+02 8.870e+02 8.875e+02 8.880e+02 8.885e+02 8.890e+02 8.895e+02 8.900e+02 8.905e+02 8.910e+02 8.915e+02 8.920e+02 8.925e+02 8.930e+02 8.935e+02 8.940e+02 8.945e+02 8.950e+02 8.955e+02 8.960e+02 8.965e+02 8.970e+02 8.975e+02 8.980e+02 8.985e+02 8.990e+02 8.995e+02 9.000e+02 9.005e+02 9.010e+02 9.015e+02 9.020e+02 9.025e+02 9.030e+02 9.035e+02 9.040e+02 9.045e+02 9.050e+02 9.055e+02 9.060e+02 9.065e+02 9.070e+02 9.075e+02 9.080e+02 9.085e+02 9.090e+02 9.095e+02 9.100e+02 9.105e+02 9.110e+02 9.115e+02 9.120e+02 9.125e+02 9.130e+02 9.135e+02 9.140e+02 9.145e+02 9.150e+02 9.155e+02 9.160e+02 9.165e+02 9.170e+02 9.175e+02 9.180e+02 9.185e+02 9.190e+02 9.195e+02 9.200e+02 9.205e+02 9.210e+02 9.215e+02 9.220e+02 9.225e+02 9.230e+02 9.235e+02 9.240e+02 9.245e+02 9.250e+02 9.255e+02 9.260e+02 9.265e+02 9.270e+02 9.275e+02 9.280e+02 9.285e+02 9.290e+02 9.295e+02 9.300e+02 9.305e+02 9.310e+02 9.315e+02 9.320e+02] INFO 2025-06-26 15:49:38,926 lopcToNetCDF.py constructTimestampList():1379 [1] timestampArray = [1.28453873e+09 1.28453873e+09 1.28453873e+09 1.28453873e+09 1.28453873e+09 1.28453873e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453948e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453949e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453950e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453951e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453952e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453953e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453954e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453955e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453956e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453957e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453958e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453959e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453960e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453961e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453962e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453963e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453964e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453965e+09 1.28453966e+09 1.28453966e+09 1.28453966e+09 1.28453966e+09 1.28453966e+09 1.28453966e+09 1.28453966e+09] INFO 2025-06-26 15:49:38,929 lopcToNetCDF.py constructTimestampList():1380 [1] timestampArray[:2] = [1284538726.2 1284538726.7, ..., timestampArray[-2:] = 1284539657.7 1284539658.2] INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1389 [1] timestampList[:2] = [np.float64(1284538726.2275956), np.float64(1284538726.7275956)], ..., timestampList[-2:] = [np.float64(1284539657.7275956), np.float64(1284539658.2275956)]] INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1394 [1] Subsampling correctedSampleCountList (len = 361) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1399 [1] lFrameCountWrittenList[:2] = [20, 41], ... lFrameCountWrittenList[-2:] = [335, 356] INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1420 [1] len(subSampledCorrectedSampleCountList) = 17 INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1439 [1] len(timestampList) = 361 INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1440 [1] timestampList[:2] = [np.float64(1284538726.2275956), np.float64(1284538726.7275956)], ..., timestampList[-2:] = [np.float64(1284539657.7275956), np.float64(1284539658.2275956)]] INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1446 [1] Subsampling timestampList (len = 361) according to what got written to the netCDF file by the binning interval INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1457 [1] Taking indices [[np.int32(19), np.int32(40)] ... [np.int32(334), np.int32(355)]] from timestampList to create subSampledTimestampList INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1463 [1] len(subSampledTimestampList) = 17 INFO 2025-06-26 15:49:38,930 lopcToNetCDF.py constructTimestampList():1477 [1] Finding elements of cFrameEsecsList that != -9999 INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2096 [1] Writing time axis for len(tsList) = 17 INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2099 [1] tsList[:1] = [np.float64(1284539487.7275956)], ..., tsList[-2:] = [np.float64(1284539645.2275956), np.float64(1284539655.7275956)] INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2100 [1] Begin time = 2010-09-15 08:31:27 Z INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2103 [1] End time = 2010-09-15 08:34:15 Z INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2107 [1] Writing time axis for len(cFrameEsecsList) = 17 INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2111 [1] cFrameEsecsList[:1] = [1.2845389e+09], ..., cFrameEsecsList[-2:] = [1.2845389e+09 1.2845389e+09] INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2116 [1] Begin time = 2010-09-15 08:21:37 Z INFO 2025-06-26 15:49:38,932 lopcToNetCDF.py closeNetCDFFile():2120 [1] End time = 2010-09-15 08:21:37 Z INFO 2025-06-26 15:49:38,936 lopcToNetCDF.py main():2381 [1] Created file: /data/auv_data/dorado/missionnetcdfs/2010.258.04/lopc.nc INFO 2025-06-26 15:49:38,936 lopcToNetCDF.py main():2384 [1] Processing finished: Thu Jun 26 15:49:38 2025 Elapsed processing time from start of processing = 0 seconds INFO 2025-06-26 15:49:38,936 process.py calibrate():227 [1] Calibration steps for 2010.258.04 INFO 2025-06-26 15:49:38,995 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:49:38,997 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:49:39,650 calibrate.py _nudge_pos():1806 [1] 109: 0.060 -0.0001296 0.0000071 250 0.83 -23.352 1.591 2010-09-15T08:21:22.386897920 INFO 2025-06-26 15:49:39,844 calibrate.py _nudge_pos():1862 [1] 80: - - - 0 0.00 - - INFO 2025-06-26 15:49:39,844 calibrate.py _nudge_pos():1868 [1] Points in final series = 640 INFO 2025-06-26 15:49:39,848 calibrate.py _depth_process():2162 [1] Removing depths outside of valid_depth_range=Range(min=-1, max=110) for self.args.mission=2010.258.04 INFO 2025-06-26 15:49:39,849 calibrate.py _depth_process():2175 [1] Setting 2 depths values to NaN WARNING 2025-06-26 15:49:39,850 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 6.67 Hz INFO 2025-06-26 15:49:39,872 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 9 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:49:39,899 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 27 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:49:39,906 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 27 seconds, d_end_time_diff: 0 seconds INFO 2025-06-26 15:49:39,907 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.258.04/ctd1.nc INFO 2025-06-26 15:49:39,908 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 15:49:39,908 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:49:39,908 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:49:39,928 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:49:39,936 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 27 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:49:39,937 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.258.04/ctd2.nc INFO 2025-06-26 15:49:39,938 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:49:39,938 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:49:39,938 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:49:39,944 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.258.04 ERROR 2025-06-26 15:49:39,954 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.258.04 INFO 2025-06-26 15:49:39,958 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_cal.nc INFO 2025-06-26 15:49:40,001 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_flowSpeed, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:49:40,007 process.py align():251 [1] Alignment steps for 2010.258.04 INFO 2025-06-26 15:49:40,030 align.py process_cal():139 [1] Processing dorado_2010.258.04_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.258.04 INFO 2025-06-26 15:49:40,035 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:49:40,036 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:49:40,046 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:49:40,047 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:49:40,056 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:49:40,057 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:49:40,063 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:49:40,063 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:49:40,067 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:49:40,068 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:49:40,077 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,078 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,087 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,088 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,097 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,098 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,107 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,108 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,117 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,119 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,127 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,128 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,137 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,138 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,147 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,148 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,157 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,159 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,167 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,169 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,178 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,179 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,188 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,190 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,198 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,200 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,208 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,210 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 3.99 INFO 2025-06-26 15:49:40,218 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,220 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,229 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,231 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,240 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,242 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,251 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,253 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,261 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,263 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,272 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,274 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,283 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,285 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,294 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.258.04_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:49:40,295 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:49:40,307 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:49:40,319 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:49:40,331 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.77 INFO 2025-06-26 15:49:40,342 align.py process_cal():249 [1] lopc_countListSum: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:49:40,355 align.py process_cal():249 [1] lopc_transCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:49:40,367 align.py process_cal():249 [1] lopc_nonTransCount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:49:40,380 align.py process_cal():249 [1] lopc_LCcount: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:49:40,392 align.py process_cal():249 [1] lopc_flowSpeed: instrument_sample_rate_hz = 0.10 INFO 2025-06-26 15:49:40,404 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 4.91 INFO 2025-06-26 15:49:40,414 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_align.nc INFO 2025-06-26 15:49:40,458 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, lopc_LCcount, lopc_countListSum, lopc_depth, lopc_flowSpeed, lopc_latitude, lopc_longitude, lopc_nonTransCount, lopc_time, lopc_transCount, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:49:40,461 process.py resample():273 [1] Resampling steps for 2010.258.04 INFO 2025-06-26 15:49:40,461 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:49:40,481 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_align.nc mission netCDF file INFO 2025-06-26 15:49:40,486 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_align.nc mission netCDF file INFO 2025-06-26 15:49:40,487 resample.py get_mission_start_end():1145 [1] navigation: 2010-09-15T08:19:34.484289792 to 2010-09-15T08:21:42.385528064 (0 days 00:12:33.342067456 before mission_end) WARNING 2025-06-26 15:49:40,488 resample.py get_mission_start_end():1156 [1] Instrument navigation has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.342067456 INFO 2025-06-26 15:49:40,489 resample.py get_mission_start_end():1145 [1] hs2 : 2010-09-15T08:18:55.706946048 to 2010-09-15T08:21:42.265536256 (0 days 00:12:33.462059264 before mission_end) WARNING 2025-06-26 15:49:40,490 resample.py get_mission_start_end():1156 [1] Instrument hs2 has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.462059264 INFO 2025-06-26 15:49:40,491 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-09-15T08:19:13.655716608 to 2010-09-15T08:21:42.395527424 (0 days 00:12:33.332068096 before mission_end) WARNING 2025-06-26 15:49:40,492 resample.py get_mission_start_end():1156 [1] Instrument ctd1 has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.332068096 INFO 2025-06-26 15:49:40,493 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-09-15T08:19:13.855702784 to 2010-09-15T08:21:42.345530624 (0 days 00:12:33.382064896 before mission_end) WARNING 2025-06-26 15:49:40,493 resample.py get_mission_start_end():1156 [1] Instrument ctd2 has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.382064896 INFO 2025-06-26 15:49:40,494 resample.py get_mission_start_end():1145 [1] isus : 2010-09-15T08:20:03.152325888 to 2010-09-15T08:21:41.935558912 (0 days 00:12:33.792036608 before mission_end) WARNING 2025-06-26 15:49:40,495 resample.py get_mission_start_end():1156 [1] Instrument isus has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.792036608 INFO 2025-06-26 15:49:40,496 resample.py get_mission_start_end():1145 [1] lopc : 2010-09-15T08:31:27.727595520 to 2010-09-15T08:34:15.727595520 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:49:40,497 resample.py get_mission_start_end():1145 [1] tailcone : 2010-09-15T08:18:47.607501056 to 2010-09-15T08:21:42.405526528 (0 days 00:12:33.322068992 before mission_end) WARNING 2025-06-26 15:49:40,498 resample.py get_mission_start_end():1156 [1] Instrument tailcone has a gap > 5 minutes at the end of the mission: 0 days 00:12:33.322068992 INFO 2025-06-26 15:49:40,498 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_align.nc mission netCDF file INFO 2025-06-26 15:49:40,498 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,527 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,527 resample.py resample_variable():1038 [1] Padding navigation_roll with 0 days 00:12:33.342067456 of NaNs to the end of mission INFO 2025-06-26 15:49:40,535 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,536 resample.py resample_variable():1038 [1] Padding navigation_pitch with 0 days 00:12:33.342067456 of NaNs to the end of mission INFO 2025-06-26 15:49:40,544 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,544 resample.py resample_variable():1038 [1] Padding navigation_yaw with 0 days 00:12:33.342067456 of NaNs to the end of mission INFO 2025-06-26 15:49:40,553 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,553 resample.py resample_variable():1038 [1] Padding navigation_mWaterSpeed with 0 days 00:12:33.342067456 of NaNs to the end of mission INFO 2025-06-26 15:49:40,562 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,562 resample.py resample_variable():1038 [1] Padding hs2_bbp420 with 0 days 00:12:33.462059264 of NaNs to the end of mission INFO 2025-06-26 15:49:40,570 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,570 resample.py resample_variable():1038 [1] Padding hs2_bbp700 with 0 days 00:12:33.462059264 of NaNs to the end of mission INFO 2025-06-26 15:49:40,579 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,579 resample.py resample_variable():1038 [1] Padding hs2_fl700 with 0 days 00:12:33.462059264 of NaNs to the end of mission INFO 2025-06-26 15:49:40,588 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,588 resample.py resample_variable():1038 [1] Padding ctd1_temperature with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,596 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,596 resample.py resample_variable():1038 [1] Padding ctd1_conductivity with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,605 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,605 resample.py resample_variable():1038 [1] Padding ctd1_salinity with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,614 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,614 resample.py resample_variable():1038 [1] Padding ctd1_temperature_onboard with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,622 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,622 resample.py resample_variable():1038 [1] Padding ctd1_conductivity_onboard with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,629 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,629 resample.py resample_variable():1038 [1] Padding ctd1_salinity_onboard with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,637 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,637 resample.py resample_variable():1038 [1] Padding ctd1_dissolvedO2 with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,645 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,645 resample.py resample_variable():1038 [1] Padding ctd1_oxygen_mll with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,652 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,653 resample.py resample_variable():1038 [1] Padding ctd1_oxygen_umolkg with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,660 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,660 resample.py resample_variable():1038 [1] Padding ctd1_flow1 with 0 days 00:12:33.332068096 of NaNs to the end of mission INFO 2025-06-26 15:49:40,670 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,671 resample.py resample_variable():1038 [1] Padding ctd2_temperature with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,680 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,680 resample.py resample_variable():1038 [1] Padding ctd2_conductivity with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,690 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,690 resample.py resample_variable():1038 [1] Padding ctd2_salinity with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,700 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,700 resample.py resample_variable():1038 [1] Padding ctd2_temperature_onboard with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,710 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,710 resample.py resample_variable():1038 [1] Padding ctd2_conductivity_onboard with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,720 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,720 resample.py resample_variable():1038 [1] Padding ctd2_salinity_onboard with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,730 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,730 resample.py resample_variable():1038 [1] Padding ctd2_flow2 with 0 days 00:12:33.382064896 of NaNs to the end of mission INFO 2025-06-26 15:49:40,740 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,740 resample.py resample_variable():1038 [1] Padding isus_nitrate with 0 days 00:12:33.792036608 of NaNs to the end of mission INFO 2025-06-26 15:49:40,750 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,750 resample.py resample_variable():1038 [1] Padding isus_temp with 0 days 00:12:33.792036608 of NaNs to the end of mission INFO 2025-06-26 15:49:40,759 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,759 resample.py resample_variable():1038 [1] Padding isus_quality with 0 days 00:12:33.792036608 of NaNs to the end of mission INFO 2025-06-26 15:49:40,769 resample.py resample_variable():1031 [1] Resampling lopc_countListSum with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,778 resample.py resample_variable():1031 [1] Resampling lopc_transCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,786 resample.py resample_variable():1031 [1] Resampling lopc_nonTransCount with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,795 resample.py resample_variable():1031 [1] Resampling lopc_LCcount with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,805 resample.py resample_variable():1031 [1] Resampling lopc_flowSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,813 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:49:40,813 resample.py resample_variable():1038 [1] Padding tailcone_propRpm with 0 days 00:12:33.322068992 of NaNs to the end of mission INFO 2025-06-26 15:49:40,934 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_1S.nc INFO 2025-06-26 15:49:41,524 create_products.py gulper_odv():401 [1] No gulper times found for 2010.258.04 INFO 2025-06-26 15:49:41,524 process.py archive():337 [1] Archiving steps for 2010.258.04 INFO 2025-06-26 15:49:41,524 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04, BASE_PATH = /data/auv_data INFO 2025-06-26 15:49:41,524 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:49:41,525 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.258.04_1S.nc INFO 2025-06-26 15:49:41,531 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:49:41,531 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.258.04_cal.nc INFO 2025-06-26 15:49:41,537 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:49:41,538 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.258.04_align.nc INFO 2025-06-26 15:49:41,544 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:49:41,549 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,553 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,556 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,560 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,563 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,567 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,571 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,574 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,581 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010258/2010.258.04 done. INFO 2025-06-26 15:49:41,581 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:49:41,581 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.258.04/dorado_2010.258.04_processing.log /Volumes/AUVCTD/surveys/2010/netcdf