INFO 2025-06-26 15:42:51,428 process.py process_mission():429 [1] commandline = src/data/process_dorado.py --start_year 2005 --end_year 2014 --num_cores 1 -v --noinput --clobber INFO 2025-06-26 15:42:51,428 process.py process_mission():434 [1] dorado_info[mission]["comment"] = AUVCTD mission - Ryan mission in Monterey Bay rhodamine sensor replaces CDOM - won't process - ctdToUse = ctd1 INFO 2025-06-26 15:42:51,429 process.py process_mission():449 [1] Processing AUVCTD mission 2010.173.00 by user docker_user on host eae60d30a712 INFO 2025-06-26 15:42:51,429 process.py download_process():165 [1] Download and processing steps for 2010.173.00 INFO 2025-06-26 15:42:51,429 logs2netcdfs.py download_process_logs():739 [1] src_dir = /Volumes/AUVCTD/missionlogs/2010/2010173/2010.173.00 INFO 2025-06-26 15:42:51,429 logs2netcdfs.py download_process_logs():768 [1] Rsyncing /Volumes/AUVCTD/missionlogs/2010/2010173/2010.173.00 to /data/auv_data/dorado/missionlogs/2010.173.00 INFO 2025-06-26 15:42:58,885 logs2netcdfs.py download_process_logs():779 [1] Processing mission: dorado 2010.173.00 INFO 2025-06-26 15:42:58,885 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/ctdDriver.log (24258918 bytes) INFO 2025-06-26 15:43:00,608 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/ctdDriver2.log (24259007 bytes) INFO 2025-06-26 15:43:02,400 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/gps.log (115772 bytes) INFO 2025-06-26 15:43:02,420 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/hydroscatlog.log (5890048 bytes) WARNING 2025-06-26 15:43:02,873 logs2netcdfs.py _read_data():216 [1] unpack requires a buffer of 4 bytes, b = b'\x05\x00' at record 70107, for Gain_Status_1 in file /data/auv_data/dorado/missionlogs/2010.173.00/hydroscatlog.log INFO 2025-06-26 15:43:02,874 logs2netcdfs.py _read_data():224 [1] bytes read = 5890050 file size = 5890048 INFO 2025-06-26 15:43:02,874 logs2netcdfs.py _read_data():229 [1] Tried to read 4 bytes, but only 2 bytes remaining INFO 2025-06-26 15:43:02,874 logs2netcdfs.py _read_data():235 [1] Successfully unpacked 70107 records WARNING 2025-06-26 15:43:02,906 logs2netcdfs.py _create_variable():536 [1] Gain_Status_2: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,906 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of Gain_Status_2.shape[0] (70108) WARNING 2025-06-26 15:43:02,906 logs2netcdfs.py _create_variable():544 [1] Gain_Status_2 data is short by one, appending the last value: 5 WARNING 2025-06-26 15:43:02,911 logs2netcdfs.py _create_variable():536 [1] Gain_Status_3: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,911 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of Gain_Status_3.shape[0] (70108) WARNING 2025-06-26 15:43:02,911 logs2netcdfs.py _create_variable():544 [1] Gain_Status_3 data is short by one, appending the last value: 5 WARNING 2025-06-26 15:43:02,920 logs2netcdfs.py _create_variable():536 [1] RawDepthValue: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,920 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of RawDepthValue.shape[0] (70108) WARNING 2025-06-26 15:43:02,920 logs2netcdfs.py _create_variable():544 [1] RawDepthValue data is short by one, appending the last value: 3835 WARNING 2025-06-26 15:43:02,928 logs2netcdfs.py _create_variable():536 [1] RawTempValue: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,928 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of RawTempValue.shape[0] (70108) WARNING 2025-06-26 15:43:02,928 logs2netcdfs.py _create_variable():544 [1] RawTempValue data is short by one, appending the last value: 116 WARNING 2025-06-26 15:43:02,935 logs2netcdfs.py _create_variable():536 [1] Temperature: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,936 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of Temperature.shape[0] (70108) WARNING 2025-06-26 15:43:02,936 logs2netcdfs.py _create_variable():544 [1] Temperature data is short by one, appending the last value: 13.2 WARNING 2025-06-26 15:43:02,942 logs2netcdfs.py _create_variable():536 [1] ErrorValue: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,942 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of ErrorValue.shape[0] (70108) WARNING 2025-06-26 15:43:02,942 logs2netcdfs.py _create_variable():544 [1] ErrorValue data is short by one, appending the last value: 32 WARNING 2025-06-26 15:43:02,949 logs2netcdfs.py _create_variable():536 [1] bb470: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,949 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of bb470.shape[0] (70108) WARNING 2025-06-26 15:43:02,949 logs2netcdfs.py _create_variable():544 [1] bb470 data is short by one, appending the last value: 0.004968683013739405 WARNING 2025-06-26 15:43:02,957 logs2netcdfs.py _create_variable():536 [1] bb676: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,957 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of bb676.shape[0] (70108) WARNING 2025-06-26 15:43:02,957 logs2netcdfs.py _create_variable():544 [1] bb676 data is short by one, appending the last value: 0.0035116529714720843 WARNING 2025-06-26 15:43:02,965 logs2netcdfs.py _create_variable():536 [1] fl676u: shape mismatch: objects cannot be broadcast to a single shape. Mismatch is between arg 0 with shape (70108,) and arg 1 with shape (70107,). INFO 2025-06-26 15:43:02,965 logs2netcdfs.py _create_variable():537 [1] len(data) (70107) does not match shape of fl676u.shape[0] (70108) WARNING 2025-06-26 15:43:02,965 logs2netcdfs.py _create_variable():544 [1] fl676u data is short by one, appending the last value: 0.001010625 INFO 2025-06-26 15:43:03,071 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/navigation.log (74531050 bytes) INFO 2025-06-26 15:43:08,410 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/isuslog.log (1569973 bytes) INFO 2025-06-26 15:43:08,565 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/parosci.log (24765542 bytes) INFO 2025-06-26 15:43:10,659 logs2netcdfs.py download_process_logs():788 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/tailCone.log (15166987 bytes) INFO 2025-06-26 15:43:12,521 logs2netcdfs.py download_process_logs():807 [1] Time to process: 13.64 seconds INFO 2025-06-26 15:43:12,522 process.py download_process():198 [1] Processing file /data/auv_data/dorado/missionlogs/2010.173.00/lopc.bin (294314807 bytes) INFO 2025-06-26 15:43:12,522 lopcToNetCDF.py main():2297 [1] Processing begun: Thu Jun 26 15:43:12 2025 INFO 2025-06-26 15:43:12,522 lopcToNetCDF.py constructTimestampList():1296 [1] parosci_nc = /data/auv_data/dorado/missionnetcdfs/2010.173.00/parosci.nc INFO 2025-06-26 15:43:12,522 lopcToNetCDF.py constructTimestampList():1297 [1] Using NetCDF4 to get start and end epoch seconds for this mission from this URL: INFO 2025-06-26 15:43:12,522 lopcToNetCDF.py constructTimestampList():1300 [1] /data/auv_data/dorado/missionnetcdfs/2010.173.00/parosci.nc INFO 2025-06-26 15:43:12,525 lopcToNetCDF.py constructTimestampList():1317 [1] From associated parosci.nc file: sensor_on_time = 1277244846.0, sensor_off_time = 1277308053.0 INFO 2025-06-26 15:43:12,525 lopcToNetCDF.py constructTimestampList():1322 [1] Duration is 63207 seconds. Expecting to read 126414 L frames from the lopc.bin file. INFO 2025-06-26 15:43:12,525 lopcToNetCDF.py constructTimestampList():1330 [1] recCount not passed in, assuming we'll have 126414 records from the lopc.bin file. INFO 2025-06-26 15:43:13,286 lopcToNetCDF.py main():2321 [1] Examined sibling parosci.nc file to find startTime = 2010-06-22 22:14:05 Z and endTime = 2010-06-23 15:47:33 Z with 126414 records expected to be read from lopc.bin INFO 2025-06-26 15:43:13,286 lopcToNetCDF.py unpackLOPCbin():723 [1] >>> Unpacking LOPC data from /data/auv_data/dorado/missionlogs/2010.173.00/lopc.bin INFO 2025-06-26 15:43:13,286 lopcToNetCDF.py unpackLOPCbin():724 [1] >>> Will write to NetCDF file /data/auv_data/dorado/missionnetcdfs/2010.173.00/lopc.nc INFO 2025-06-26 15:43:13,286 lopcToNetCDF.py openNetCDFFile():1861 [1] Will output NetCDF file to /data/auv_data/dorado/missionnetcdfs/2010.173.00/lopc.nc INFO 2025-06-26 15:43:13,287 lopcToNetCDF.py openNetCDFFile():1887 [1] missionName = 2010.173.00 INFO 2025-06-26 15:43:13,287 lopcToNetCDF.py openNetCDFFile():1910 [1] Writing bin axis for len(self.dataStructure['binSizeList']) = 994 ERROR 2025-06-26 15:43:13,302 process.py download_process():223 [1] UnexpectedAreaOfCode: Encountered unexpected area of code - lopc.nc file is probably corrupt INFO 2025-06-26 15:43:13,304 process.py calibrate():227 [1] Calibration steps for 2010.173.00 INFO 2025-06-26 15:43:13,686 calibrate.py _nudge_pos():1680 [1] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-06-26 15:43:13,688 calibrate.py _nudge_pos():1711 [1] - - - 0 0.00 - - - INFO 2025-06-26 15:43:14,397 calibrate.py _nudge_pos():1806 [1] 104: 0.140 0.0002749 -0.0009369 1525 5.08 8.027 -34.174 2010-06-22T22:20:53.082312192 INFO 2025-06-26 15:43:14,437 calibrate.py _nudge_pos():1806 [1] 108: 0.130 0.0000618 -0.0000497 30 0.10 94.881 -95.354 2010-06-22T22:21:02.081695488 INFO 2025-06-26 15:43:14,961 calibrate.py _nudge_pos():1806 [1] 160: 0.140 0.0014341 -0.0089638 14725 49.08 4.335 -33.842 2010-06-22T23:10:59.086386688 INFO 2025-06-26 15:43:15,498 calibrate.py _nudge_pos():1806 [1] 213: 0.150 -0.0017371 -0.0002964 9550 31.83 -8.094 -1.725 2010-06-22T23:43:41.081980928 INFO 2025-06-26 15:43:16,047 calibrate.py _nudge_pos():1806 [1] 268: 0.140 -0.0007769 -0.0092005 13980 46.60 -2.473 -36.587 2010-06-23T00:31:11.086742272 INFO 2025-06-26 15:43:16,597 calibrate.py _nudge_pos():1806 [1] 322: 0.150 -0.0008546 -0.0001184 9485 31.61 -4.009 -0.694 2010-06-23T01:03:41.083158272 INFO 2025-06-26 15:43:17,128 calibrate.py _nudge_pos():1806 [1] 373: 0.160 0.0009555 -0.0085344 13159 43.86 3.230 -36.054 2010-06-23T01:48:23.079428864 INFO 2025-06-26 15:43:17,496 calibrate.py _nudge_pos():1806 [1] 409: 0.160 -0.0020004 -0.0028209 7295 24.31 -12.203 -21.499 2010-06-23T02:13:17.077083136 INFO 2025-06-26 15:43:18,104 calibrate.py _nudge_pos():1806 [1] 468: 0.160 -0.0024361 -0.0022991 9070 30.23 -11.955 -14.093 2010-06-23T02:44:29.078842112 INFO 2025-06-26 15:43:18,136 calibrate.py _nudge_pos():1806 [1] 471: 0.160 -0.0000076 -0.0000155 90 0.30 -3.819 -9.685 2010-06-23T02:44:49.077472256 INFO 2025-06-26 15:43:18,481 calibrate.py _nudge_pos():1806 [1] 505: 0.160 0.0013687 -0.0086760 13115 43.71 4.645 -36.777 2010-06-23T03:29:05.085523200 INFO 2025-06-26 15:43:18,800 calibrate.py _nudge_pos():1806 [1] 536: 0.160 0.0000279 -0.0000001 30 0.10 42.857 -0.228 2010-06-23T03:29:41.083057152 INFO 2025-06-26 15:43:18,933 calibrate.py _nudge_pos():1806 [1] 548: 0.160 -0.0014614 -0.0002488 9455 31.51 -6.878 -1.463 2010-06-23T04:01:23.082761216 INFO 2025-06-26 15:43:18,985 calibrate.py _nudge_pos():1806 [1] 553: 0.160 0.0000028 -0.0000033 15 0.05 9.048 -13.225 2010-06-23T04:01:30.082281728 INFO 2025-06-26 15:43:19,464 calibrate.py _nudge_pos():1806 [1] 600: 0.170 -0.0002361 -0.0097737 14465 48.21 -0.726 -37.564 2010-06-23T04:50:29.080946688 INFO 2025-06-26 15:43:19,934 calibrate.py _nudge_pos():1806 [1] 646: 0.170 0.0002266 -0.0001045 9495 31.65 1.062 -0.612 2010-06-23T05:22:53.077773568 INFO 2025-06-26 15:43:20,348 calibrate.py _nudge_pos():1806 [1] 685: 0.170 0.0012123 -0.0090345 11960 39.86 4.510 -41.996 2010-06-23T06:03:23.081306880 INFO 2025-06-26 15:43:20,884 calibrate.py _nudge_pos():1806 [1] 736: 0.170 -0.0023515 -0.0034867 7550 25.16 -13.860 -25.676 2010-06-23T06:29:23.084439552 INFO 2025-06-26 15:43:20,895 calibrate.py _nudge_pos():1806 [1] 737: 0.170 -0.0000322 -0.0000486 70 0.23 -20.754 -39.155 2010-06-23T06:29:37.083480576 INFO 2025-06-26 15:43:21,479 calibrate.py _nudge_pos():1806 [1] 791: 0.170 -0.0029510 -0.0028051 10165 33.88 -12.921 -15.342 2010-06-23T07:04:23.080580096 INFO 2025-06-26 15:43:21,900 calibrate.py _nudge_pos():1806 [1] 830: 0.180 0.0000622 -0.0000168 25 0.08 115.338 -38.922 2010-06-23T07:05:06.077634304 INFO 2025-06-26 15:43:21,924 calibrate.py _nudge_pos():1806 [1] 832: 0.170 0.0006096 -0.0085693 11870 39.56 2.286 -40.135 2010-06-23T07:44:41.084935168 INFO 2025-06-26 15:43:22,486 calibrate.py _nudge_pos():1806 [1] 884: 0.170 -0.0004503 -0.0000941 9435 31.45 -2.124 -0.555 2010-06-23T08:16:59.082173440 INFO 2025-06-26 15:43:22,519 calibrate.py _nudge_pos():1806 [1] 887: 0.180 0.0000025 0.0000368 85 0.28 1.338 24.376 2010-06-23T08:17:18.080871936 INFO 2025-06-26 15:43:22,895 calibrate.py _nudge_pos():1806 [1] 922: 0.180 -0.0013376 -0.0094317 14615 48.71 -4.073 -35.877 2010-06-23T09:06:35.078303488 INFO 2025-06-26 15:43:23,402 calibrate.py _nudge_pos():1806 [1] 968: 0.180 -0.0001215 -0.0001190 9545 31.81 -0.566 -0.693 2010-06-23T09:39:09.084444928 INFO 2025-06-26 15:43:23,922 calibrate.py _nudge_pos():1806 [1] 1016: 0.180 0.0019303 -0.0094555 13185 43.95 6.514 -39.869 2010-06-23T10:23:53.080578816 INFO 2025-06-26 15:43:24,372 calibrate.py _nudge_pos():1806 [1] 1057: 0.190 -0.0020494 -0.0030605 7300 24.33 -12.493 -23.309 2010-06-23T10:48:53.077821952 INFO 2025-06-26 15:43:24,947 calibrate.py _nudge_pos():1806 [1] 1110: 0.190 -0.0024208 -0.0021659 9670 32.23 -11.142 -12.453 2010-06-23T11:21:59.081771264 INFO 2025-06-26 15:43:25,492 calibrate.py _nudge_pos():1806 [1] 1159: 0.190 0.0022165 -0.0092328 13950 46.50 7.072 -36.795 2010-06-23T12:09:17.077355264 INFO 2025-06-26 15:43:26,039 calibrate.py _nudge_pos():1806 [1] 1209: 0.190 -0.0021988 -0.0003793 9565 31.88 -10.230 -2.205 2010-06-23T12:41:59.082948608 INFO 2025-06-26 15:43:26,529 calibrate.py _nudge_pos():1806 [1] 1254: 0.190 -0.0001606 -0.0104317 13630 45.43 -0.524 -42.549 2010-06-23T13:28:11.083053568 INFO 2025-06-26 15:43:26,945 calibrate.py _nudge_pos():1806 [1] 1292: 0.190 -0.0009561 -0.0001186 9595 31.98 -4.433 -0.687 2010-06-23T14:00:47.079058688 INFO 2025-06-26 15:43:27,495 calibrate.py _nudge_pos():1806 [1] 1341: 0.200 0.0009516 -0.0093870 12870 42.90 3.290 -40.549 2010-06-23T14:44:29.079439360 INFO 2025-06-26 15:43:27,878 calibrate.py _nudge_pos():1806 [1] 1376: 0.200 0.0003844 -0.0022964 3429 11.43 4.989 -37.239 2010-06-23T14:56:29.080115968 INFO 2025-06-26 15:43:27,934 calibrate.py _nudge_pos():1806 [1] 1381: 0.200 0.0000038 0.0000066 99 0.33 1.748 3.742 2010-06-23T14:56:53.078471936 INFO 2025-06-26 15:43:28,521 calibrate.py _nudge_pos():1806 [1] 1433: 0.200 -0.0012034 -0.0011223 4185 13.95 -12.797 -14.911 2010-06-23T15:11:41.077639936 INFO 2025-06-26 15:43:28,533 calibrate.py _nudge_pos():1806 [1] 1434: 0.190 0.0000015 -0.0000027 94 0.31 0.716 -1.643 2010-06-23T15:12:00.086337792 INFO 2025-06-26 15:43:29,107 calibrate.py _nudge_pos():1806 [1] 1485: 0.190 -0.0014354 -0.0012104 4454 14.84 -14.343 -15.111 2010-06-23T15:27:41.081875200 INFO 2025-06-26 15:43:29,142 calibrate.py _nudge_pos():1806 [1] 1488: 0.200 0.0000276 0.0000051 95 0.31 13.062 3.010 2010-06-23T15:28:02.080436736 INFO 2025-06-26 15:43:29,635 calibrate.py _nudge_pos():1806 [1] 1532: 0.190 -0.0017457 -0.0017438 5319 17.73 -14.609 -18.228 2010-06-23T15:46:29.084601600 INFO 2025-06-26 15:43:30,348 calibrate.py _nudge_pos():1862 [1] 1549: - - - 3 0.01 - - INFO 2025-06-26 15:43:30,348 calibrate.py _nudge_pos():1868 [1] Points in final series = 315626 WARNING 2025-06-26 15:43:30,747 calibrate.py _depth_process():2193 [1] Expected sample_rate to be 10 Hz, instead it's 8.33 Hz INFO 2025-06-26 15:43:31,492 calibrate.py _geometric_depth_correction():3423 [1] hs2: d_beg_time_diff: 5 seconds, d_end_time_diff: -45668 seconds INFO 2025-06-26 15:43:33,987 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 36 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:43:35,936 calibrate.py _geometric_depth_correction():3423 [1] ctd1: d_beg_time_diff: 36 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:43:35,940 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd1_salinity'] in 2010.173.00/ctd1.nc INFO 2025-06-26 15:43:35,942 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd1_salinity values to NaN INFO 2025-06-26 15:43:35,942 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:43:35,942 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd1 INFO 2025-06-26 15:43:38,186 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 35 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:43:40,116 calibrate.py _geometric_depth_correction():3423 [1] ctd2: d_beg_time_diff: 35 seconds, d_end_time_diff: -1 seconds INFO 2025-06-26 15:43:40,120 calibrate.py _ctd_process():2919 [1] Performing range checking of ['ctd2_salinity'] in 2010.173.00/ctd2.nc INFO 2025-06-26 15:43:40,121 calibrate.py _range_qc_combined_nc():898 [1] Setting 0 ctd2_salinity values to NaN INFO 2025-06-26 15:43:40,122 calibrate.py _range_qc_combined_nc():910 [1] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-06-26 15:43:40,122 calibrate.py _range_qc_combined_nc():936 [1] Done range checking ctd2 ERROR 2025-06-26 15:43:40,167 calibrate.py process_logs():3542 [1] Error processing biolume: biolume has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.173.00 ERROR 2025-06-26 15:43:40,167 calibrate.py process_logs():3542 [1] Error processing lopc: lopc has no time coordinate - likely an incomplete lopc.nc file in missionlogs/2010.173.00 ERROR 2025-06-26 15:43:40,167 calibrate.py process_logs():3542 [1] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2010.173.00 INFO 2025-06-26 15:43:40,409 calibrate.py write_netcdf():3508 [1] Writing calibrated instrument data to /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_cal.nc INFO 2025-06-26 15:43:40,591 calibrate.py write_netcdf():3512 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-06-26 15:43:40,596 process.py align():251 [1] Alignment steps for 2010.173.00 INFO 2025-06-26 15:43:40,635 align.py process_cal():139 [1] Processing dorado_2010.173.00_cal.nc from /data/auv_data/dorado/missionnetcdfs/2010.173.00 INFO 2025-06-26 15:43:40,718 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:43:40,726 align.py process_cal():249 [1] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:43:40,938 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:43:40,952 align.py process_cal():249 [1] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:43:41,151 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:43:41,162 align.py process_cal():249 [1] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:43:41,282 align.py process_cal():161 [1] Skipping navigation_posx INFO 2025-06-26 15:43:41,282 align.py process_cal():161 [1] Skipping navigation_posy INFO 2025-06-26 15:43:41,361 align.py process_cal():206 [1] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-06-26 15:43:41,373 align.py process_cal():249 [1] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:43:41,549 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:41,555 align.py process_cal():249 [1] hs2_bbp420: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:41,642 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:41,647 align.py process_cal():249 [1] hs2_bbp700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:41,737 align.py process_cal():206 [1] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:41,741 align.py process_cal():249 [1] hs2_fl700: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:41,845 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:41,853 align.py process_cal():249 [1] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,023 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,033 align.py process_cal():249 [1] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,198 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,207 align.py process_cal():249 [1] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,379 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,388 align.py process_cal():249 [1] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,558 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,567 align.py process_cal():249 [1] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,733 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,742 align.py process_cal():249 [1] ctd1_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:42,908 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:42,918 align.py process_cal():249 [1] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,089 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,098 align.py process_cal():249 [1] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,263 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,273 align.py process_cal():249 [1] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,442 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,452 align.py process_cal():249 [1] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,622 align.py process_cal():206 [1] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,631 align.py process_cal():249 [1] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,798 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,808 align.py process_cal():249 [1] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:43,977 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:43,987 align.py process_cal():249 [1] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:44,157 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:44,166 align.py process_cal():249 [1] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:44,333 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:44,343 align.py process_cal():249 [1] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:44,515 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:44,525 align.py process_cal():249 [1] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:44,695 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:44,704 align.py process_cal():249 [1] ctd2_salinity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:44,871 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:44,881 align.py process_cal():249 [1] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:45,049 align.py process_cal():206 [1] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2010.173.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=4.5, y=0.0) INFO 2025-06-26 15:43:45,058 align.py process_cal():249 [1] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-06-26 15:43:45,261 align.py process_cal():249 [1] isus_nitrate: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:43:45,385 align.py process_cal():249 [1] isus_temp: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:43:45,514 align.py process_cal():249 [1] isus_quality: instrument_sample_rate_hz = 0.78 INFO 2025-06-26 15:43:45,643 align.py process_cal():249 [1] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-06-26 15:43:45,770 align.py write_netcdf():337 [1] Writing aligned data to /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_align.nc INFO 2025-06-26 15:43:45,903 align.py write_netcdf():342 [1] Data variables written: ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_salinity_onboard, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_salinity_onboard, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp420, hs2_bbp700, hs2_depth, hs2_fl700, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-06-26 15:43:45,905 process.py resample():273 [1] Resampling steps for 2010.173.00 INFO 2025-06-26 15:43:45,906 resample.py resample_mission():1185 [1] Using depth_threshold = 10.00 m INFO 2025-06-26 15:43:45,936 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_align.nc mission netCDF file INFO 2025-06-26 15:43:45,944 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_align.nc mission netCDF file INFO 2025-06-26 15:43:45,946 resample.py get_mission_start_end():1145 [1] navigation: 2010-06-22T22:14:52.786993920 to 2010-06-23T15:47:32.880231424 (0 days 00:00:00.109992448 before mission_end) INFO 2025-06-26 15:43:45,948 resample.py get_mission_start_end():1145 [1] hs2 : 2010-06-22T22:14:11.819800576 to 2010-06-23T03:06:26.008626176 (0 days 12:41:06.981597696 before mission_end) WARNING 2025-06-26 15:43:45,949 resample.py get_mission_start_end():1156 [1] Instrument hs2 has a gap > 5 minutes at the end of the mission: 0 days 12:41:06.981597696 INFO 2025-06-26 15:43:45,950 resample.py get_mission_start_end():1145 [1] ctd1 : 2010-06-22T22:14:42.077727744 to 2010-06-23T15:47:32.950226432 (0 days 00:00:00.039997440 before mission_end) INFO 2025-06-26 15:43:45,953 resample.py get_mission_start_end():1145 [1] ctd2 : 2010-06-22T22:14:41.947736832 to 2010-06-23T15:47:32.990223872 (0 days 00:00:00 before mission_end) INFO 2025-06-26 15:43:45,955 resample.py get_mission_start_end():1145 [1] isus : 2010-06-22T22:15:20.835072768 to 2010-06-23T15:47:31.580320256 (0 days 00:00:01.409903616 before mission_end) INFO 2025-06-26 15:43:45,957 resample.py get_mission_start_end():1145 [1] tailcone : 2010-06-22T22:14:05.980200448 to 2010-06-23T15:47:32.930227968 (0 days 00:00:00.059995904 before mission_end) INFO 2025-06-26 15:43:45,958 resample.py instruments_variables():235 [1] Reading variables from /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_align.nc mission netCDF file INFO 2025-06-26 15:43:45,959 resample.py resample_coordinates():249 [1] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,610 resample.py resample_variable():1031 [1] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,712 resample.py resample_variable():1031 [1] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,811 resample.py resample_variable():1031 [1] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,911 resample.py resample_variable():1031 [1] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,951 resample.py resample_variable():1031 [1] Resampling hs2_bbp420 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,951 resample.py resample_variable():1038 [1] Padding hs2_bbp420 with 0 days 12:41:06.981597696 of NaNs to the end of mission INFO 2025-06-26 15:43:46,985 resample.py resample_variable():1031 [1] Resampling hs2_bbp700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:46,985 resample.py resample_variable():1038 [1] Padding hs2_bbp700 with 0 days 12:41:06.981597696 of NaNs to the end of mission INFO 2025-06-26 15:43:47,019 resample.py resample_variable():1031 [1] Resampling hs2_fl700 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,019 resample.py resample_variable():1038 [1] Padding hs2_fl700 with 0 days 12:41:06.981597696 of NaNs to the end of mission INFO 2025-06-26 15:43:47,099 resample.py resample_variable():1031 [1] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,180 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,260 resample.py resample_variable():1031 [1] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,340 resample.py resample_variable():1031 [1] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,419 resample.py resample_variable():1031 [1] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,499 resample.py resample_variable():1031 [1] Resampling ctd1_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,580 resample.py resample_variable():1031 [1] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,659 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,738 resample.py resample_variable():1031 [1] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,817 resample.py resample_variable():1031 [1] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,899 resample.py resample_variable():1031 [1] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:47,981 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,064 resample.py resample_variable():1031 [1] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,147 resample.py resample_variable():1031 [1] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,229 resample.py resample_variable():1031 [1] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,311 resample.py resample_variable():1031 [1] Resampling ctd2_salinity_onboard with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,392 resample.py resample_variable():1031 [1] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,423 resample.py resample_variable():1031 [1] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,452 resample.py resample_variable():1031 [1] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,479 resample.py resample_variable():1031 [1] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:48,573 resample.py resample_variable():1031 [1] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-06-26 15:43:49,045 resample.py resample_mission():1297 [1] Saved resampled mission to /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_1S.nc INFO 2025-06-26 15:43:51,709 create_products.py _get_best_ctd():380 [1] ctdToUse = ctd1 INFO 2025-06-26 15:44:02,417 create_products.py gulper_odv():522 [1] Wrote 10 Gulper data lines to /data/auv_data/dorado/missionodvs/2010.173.00/dorado_2010.173.00_1S_Gulper.txt INFO 2025-06-26 15:44:02,417 process.py archive():337 [1] Archiving steps for 2010.173.00 INFO 2025-06-26 15:44:02,417 process.py archive():347 [1] nc_file_base = /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00, BASE_PATH = /data/auv_data INFO 2025-06-26 15:44:02,418 archive.py copy_to_AUVTCD():60 [1] Archiving /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00 files to /Volumes/AUVCTD/surveys/2010/netcdf INFO 2025-06-26 15:44:02,419 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.173.00_1S.nc INFO 2025-06-26 15:44:02,464 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_1S.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:44:02,465 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.173.00_cal.nc INFO 2025-06-26 15:44:02,678 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_cal.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:44:02,679 archive.py copy_to_AUVTCD():78 [1] Removing /Volumes/AUVCTD/surveys/2010/netcdf/dorado_2010.173.00_align.nc INFO 2025-06-26 15:44:02,893 archive.py copy_to_AUVTCD():82 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_align.nc /Volumes/AUVCTD/surveys/2010/netcdf done. INFO 2025-06-26 15:44:02,959 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,026 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,032 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/gps.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,051 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,230 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,240 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,305 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,355 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,359 archive.py copy_to_AUVTCD():108 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/lopc.nc /Volumes/AUVCTD/missionnetcdfs/2010/2010173/2010.173.00 done. INFO 2025-06-26 15:44:03,359 archive.py copy_to_AUVTCD():116 [1] Archiving product files INFO 2025-06-26 15:44:03,360 archive.py copy_to_AUVTCD():133 [1] Removing /Volumes/AUVCTD/surveys/2010/odv/dorado_2010.173.00_1S_Gulper.txt INFO 2025-06-26 15:44:03,365 archive.py copy_to_AUVTCD():136 [1] copyfile /data/auv_data/dorado/missionodvs/2010.173.00/dorado_2010.173.00_1S_Gulper.txt /Volumes/AUVCTD/surveys/2010/odv done. INFO 2025-06-26 15:44:03,365 archive.py copy_to_AUVTCD():161 [1] copyfile /data/auv_data/dorado/missionnetcdfs/2010.173.00/dorado_2010.173.00_processing.log /Volumes/AUVCTD/surveys/2010/netcdf