INFO 2025-11-06 15:27:12,930 logs2netcdfs.py download_process_logs():762 [12046] src_dir = /Volumes/AUVCTD/missionlogs/2004/2004251/2004.251.00 INFO 2025-11-06 15:27:12,931 logs2netcdfs.py download_process_logs():791 [12046] Rsyncing /Volumes/AUVCTD/missionlogs/2004/2004251/2004.251.00 to /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00 INFO 2025-11-06 15:27:34,583 logs2netcdfs.py download_process_logs():802 [12046] Processing mission: dorado 2004.251.00 INFO 2025-11-06 15:27:34,584 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/ctdDriver.log (9571891 bytes) INFO 2025-11-06 15:27:35,214 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/ctdDriver2.log (9568893 bytes) INFO 2025-11-06 15:27:35,858 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/gps.log (1480748 bytes) INFO 2025-11-06 15:27:36,024 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/hydroscatlog.log (6527534 bytes) INFO 2025-11-06 15:27:36,635 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/navigation.log (21209299 bytes) INFO 2025-11-06 15:27:38,034 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/isuslog.log (618236 bytes) INFO 2025-11-06 15:27:38,241 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/parosci.log (6530678 bytes) INFO 2025-11-06 15:27:38,715 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/tailCone.log (6531019 bytes) INFO 2025-11-06 15:27:39,469 logs2netcdfs.py download_process_logs():811 [12046] Processing file /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionlogs/2004.251.00/biolume.log (7405068 bytes) INFO 2025-11-06 15:27:40,198 logs2netcdfs.py write_variables():577 [12046] Expanding original timeTag to time60Hz variable for raw data INFO 2025-11-06 15:27:40,518 logs2netcdfs.py download_process_logs():830 [12046] Time to process: 5.93 seconds WARNING 2025-11-06 15:27:40,538 process.py download_process():249 [12046] No lopc.bin file for 2004.251.00 INFO 2025-11-06 15:27:40,935 AUV.py nudge_positions():80 [12046] seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2025-11-06 15:27:40,945 AUV.py nudge_positions():114 [12046] - - - 0 0.00 - - - INFO 2025-11-06 15:27:42,800 AUV.py nudge_positions():203 [12046] 152: 0.080 -0.0000256 0.0000499 35 0.11 -33.532 81.621 2004-09-07T15:37:01.977287808 INFO 2025-11-06 15:27:43,248 AUV.py nudge_positions():203 [12046] 174: 0.090 0.0003319 0.0051642 11475 38.25 1.289 25.020 2004-09-07T16:15:37.978630784 INFO 2025-11-06 15:27:44,616 AUV.py nudge_positions():203 [12046] 245: 0.080 0.0008402 0.0024152 5875 19.58 6.372 22.857 2004-09-07T16:36:22.983342208 INFO 2025-11-06 15:27:44,717 AUV.py nudge_positions():203 [12046] 250: 0.080 -0.0000165 0.0000276 50 0.16 -14.983 31.317 2004-09-07T16:36:36.982382976 INFO 2025-11-06 15:27:44,742 AUV.py nudge_positions():203 [12046] 251: 0.080 0.0001501 0.0000784 140 0.46 48.116 31.372 2004-09-07T16:37:04.980465152 INFO 2025-11-06 15:27:45,354 AUV.py nudge_positions():203 [12046] 281: 0.090 0.0000065 -0.0000292 40 0.13 7.465 -41.680 2004-09-07T16:37:41.977930496 INFO 2025-11-06 15:27:45,417 AUV.py nudge_positions():203 [12046] 284: 0.080 0.0000829 0.0000595 60 0.20 62.588 56.108 2004-09-07T16:37:55.976971648 INFO 2025-11-06 15:27:45,438 AUV.py nudge_positions():203 [12046] 285: 0.080 0.0001188 -0.0000272 20 0.06 278.468 -79.562 2004-09-07T16:37:59.976697728 INFO 2025-11-06 15:27:45,495 AUV.py nudge_positions():203 [12046] 289: 0.080 0.0001673 0.0001636 250 0.83 29.929 36.528 2004-09-07T16:38:52.983066368 INFO 2025-11-06 15:27:45,570 AUV.py nudge_positions():203 [12046] 293: 0.080 0.0000672 0.0000165 130 0.43 23.213 7.097 2004-09-07T16:39:21.981079808 INFO 2025-11-06 15:27:45,626 AUV.py nudge_positions():203 [12046] 297: 0.090 0.0001096 0.0000129 180 0.60 27.290 3.996 2004-09-07T16:40:01.978339968 INFO 2025-11-06 15:27:45,730 AUV.py nudge_positions():203 [12046] 303: 0.080 0.0001696 0.0000627 255 0.85 29.735 13.725 2004-09-07T16:40:57.984503296 INFO 2025-11-06 15:27:45,879 AUV.py nudge_positions():203 [12046] 307: 0.080 0.0000889 0.0000232 170 0.56 23.425 7.645 2004-09-07T16:41:34.981968640 INFO 2025-11-06 15:27:46,130 AUV.py nudge_positions():203 [12046] 319: 0.080 0.0001385 -0.0000548 270 0.90 22.930 -11.334 2004-09-07T16:42:39.977516160 INFO 2025-11-06 15:27:46,159 AUV.py nudge_positions():203 [12046] 321: 0.080 0.0000697 0.0002995 450 1.50 6.917 37.078 2004-09-07T16:44:10.981282048 INFO 2025-11-06 15:27:47,194 AUV.py nudge_positions():203 [12046] 385: 0.070 0.0002258 -0.0000694 135 0.45 75.050 -28.774 2004-09-07T16:45:40.985116544 INFO 2025-11-06 15:27:47,222 AUV.py nudge_positions():203 [12046] 387: 0.070 0.0008005 -0.0002520 745 2.48 47.932 -18.825 2004-09-07T16:48:10.984840576 INFO 2025-11-06 15:27:47,278 AUV.py nudge_positions():203 [12046] 392: 0.080 0.0008883 -0.0003251 95 0.31 421.011 -192.287 2004-09-07T16:48:34.983196672 INFO 2025-11-06 15:27:47,329 AUV.py nudge_positions():203 [12046] 397: 0.080 0.0009166 -0.0002976 75 0.25 551.852 -223.577 2004-09-07T16:48:53.981895168 INFO 2025-11-06 15:27:47,540 AUV.py nudge_positions():203 [12046] 411: 0.080 0.0004213 0.0002897 530 1.76 35.475 30.445 2004-09-07T16:50:52.983742976 INFO 2025-11-06 15:27:47,776 AUV.py nudge_positions():203 [12046] 425: 0.080 0.0003858 0.0001719 20 0.06 904.641 502.961 2004-09-07T16:51:09.982578560 INFO 2025-11-06 15:27:47,840 AUV.py nudge_positions():203 [12046] 428: 0.090 0.0005227 0.0002189 205 0.68 114.139 59.645 2004-09-07T16:51:52.979633152 INFO 2025-11-06 15:27:47,950 AUV.py nudge_positions():203 [12046] 434: 0.070 -0.0000387 0.0001636 365 1.21 -4.739 24.982 2004-09-07T16:53:10.984289408 INFO 2025-11-06 15:27:48,592 AUV.py nudge_positions():203 [12046] 472: 0.080 -0.0000648 0.0000738 30 0.10 -99.544 141.423 2004-09-07T16:53:53.981343744 INFO 2025-11-06 15:27:48,864 AUV.py nudge_positions():203 [12046] 489: 0.090 0.0000774 0.0002997 115 0.38 30.237 146.163 2004-09-07T16:54:32.978672256 INFO 2025-11-06 15:27:48,919 AUV.py nudge_positions():203 [12046] 493: 0.070 0.0002146 -0.0000096 155 0.51 62.052 -3.472 2004-09-07T16:55:06.986342656 INFO 2025-11-06 15:27:49,005 AUV.py nudge_positions():203 [12046] 501: 0.070 0.0003186 -0.0000236 85 0.28 168.949 -15.632 2004-09-07T16:55:30.984698496 INFO 2025-11-06 15:27:49,026 AUV.py nudge_positions():203 [12046] 502: 0.080 0.0004624 -0.0000435 40 0.13 528.259 -61.983 2004-09-07T16:55:38.984150656 INFO 2025-11-06 15:27:49,044 AUV.py nudge_positions():203 [12046] 503: 0.080 0.0004682 -0.0001164 20 0.06 1097.874 -340.499 2004-09-07T16:55:42.983876736 INFO 2025-11-06 15:27:49,072 AUV.py nudge_positions():203 [12046] 504: 0.080 0.0006844 -0.0001275 710 2.36 43.003 -9.997 2004-09-07T16:58:04.984148992 INFO 2025-11-06 15:27:49,201 AUV.py nudge_positions():203 [12046] 513: 0.080 0.0002523 0.0003138 1280 4.26 8.789 13.639 2004-09-07T17:02:28.986063488 INFO 2025-11-06 15:27:49,909 AUV.py nudge_positions():203 [12046] 580: 0.090 0.0001707 0.0000184 215 0.71 35.525 4.781 2004-09-07T17:04:19.978460032 INFO 2025-11-06 15:27:49,923 AUV.py nudge_positions():203 [12046] 582: 0.090 0.0001078 0.0001379 15 0.05 343.042 547.620 2004-09-07T17:04:23.978186112 INFO 2025-11-06 15:27:49,931 AUV.py nudge_positions():203 [12046] 583: 0.090 0.0003434 0.0001348 85 0.28 182.125 89.229 2004-09-07T17:04:40.977021696 INFO 2025-11-06 15:27:49,971 AUV.py nudge_positions():203 [12046] 588: 0.080 0.0001491 0.0000624 25 0.08 276.141 144.328 2004-09-07T17:04:49.986404480 INFO 2025-11-06 15:27:49,981 AUV.py nudge_positions():203 [12046] 589: 0.080 0.0003707 0.0000239 20 0.06 869.104 70.053 2004-09-07T17:04:53.986130432 INFO 2025-11-06 15:27:49,998 AUV.py nudge_positions():203 [12046] 591: 0.090 0.0004270 0.0000345 350 1.16 54.509 5.494 2004-09-07T17:06:04.981266944 INFO 2025-11-06 15:27:50,005 AUV.py nudge_positions():203 [12046] 592: 0.090 0.0003649 0.0000204 15 0.05 1161.265 81.035 2004-09-07T17:06:07.981061504 INFO 2025-11-06 15:27:50,012 AUV.py nudge_positions():203 [12046] 593: 0.080 0.0003993 0.0000235 15 0.05 1270.751 93.508 2004-09-07T17:06:10.980855936 INFO 2025-11-06 15:27:50,040 AUV.py nudge_positions():203 [12046] 597: 0.080 0.0004387 0.0000362 110 0.36 179.319 18.451 2004-09-07T17:06:35.979143424 INFO 2025-11-06 15:27:50,056 AUV.py nudge_positions():203 [12046] 599: 0.090 0.0005625 0.0000183 15 0.05 1789.989 72.712 2004-09-07T17:06:39.978869376 INFO 2025-11-06 15:27:50,070 AUV.py nudge_positions():203 [12046] 601: 0.080 0.0010304 -0.0000759 1080 3.60 42.540 -3.910 2004-09-07T17:10:16.984003584 INFO 2025-11-06 15:27:50,085 AUV.py nudge_positions():203 [12046] 603: 0.090 0.0010847 0.0001147 415 1.38 116.722 15.401 2004-09-07T17:11:40.978249600 INFO 2025-11-06 15:27:50,747 AUV.py nudge_positions():203 [12046] 674: 0.080 0.0000295 -0.0000079 40 0.13 33.723 -11.200 2004-09-07T17:12:58.982905856 INFO 2025-11-06 15:27:50,809 AUV.py nudge_positions():203 [12046] 678: 0.080 0.0001344 0.0000184 95 0.31 63.701 10.874 2004-09-07T17:13:20.981398784 INFO 2025-11-06 15:27:50,838 AUV.py nudge_positions():203 [12046] 680: 0.080 0.0006826 -0.0001959 115 0.38 266.736 -95.522 2004-09-07T17:13:44.979754880 INFO 2025-11-06 15:27:50,852 AUV.py nudge_positions():203 [12046] 681: 0.080 0.0001144 -0.0000357 20 0.06 268.125 -104.442 2004-09-07T17:13:48.979480704 INFO 2025-11-06 15:27:50,918 AUV.py nudge_positions():203 [12046] 686: 0.080 0.0002610 0.0000662 415 1.38 28.080 8.888 2004-09-07T17:15:16.983452032 INFO 2025-11-06 15:27:51,015 AUV.py nudge_positions():203 [12046] 692: 0.090 -0.0000433 0.0000171 115 0.38 -16.920 8.354 2004-09-07T17:15:44.981534208 INFO 2025-11-06 15:27:51,043 AUV.py nudge_positions():203 [12046] 694: 0.080 -0.0000579 0.0000756 30 0.10 -88.975 144.883 2004-09-07T17:15:51.981054592 INFO 2025-11-06 15:27:51,054 AUV.py nudge_positions():203 [12046] 695: 0.080 0.0003563 0.0006387 1475 4.91 10.766 24.087 2004-09-07T17:20:46.980845696 INFO 2025-11-06 15:27:51,723 AUV.py nudge_positions():203 [12046] 767: 0.080 0.0000602 0.0000722 15 0.05 191.692 286.755 2004-09-07T17:22:00.985776128 INFO 2025-11-06 15:27:51,740 AUV.py nudge_positions():203 [12046] 769: 0.090 0.0001468 0.0002130 555 1.85 11.803 21.371 2004-09-07T17:23:52.978104064 INFO 2025-11-06 15:27:51,877 AUV.py nudge_positions():203 [12046] 784: 0.080 0.0004503 -0.0000509 750 2.50 26.782 -3.776 2004-09-07T17:26:36.976869376 INFO 2025-11-06 15:27:51,899 AUV.py nudge_positions():203 [12046] 786: 0.070 0.0005463 -0.0000380 115 0.38 213.388 -18.501 2004-09-07T17:27:00.985224704 INFO 2025-11-06 15:27:51,931 AUV.py nudge_positions():203 [12046] 789: 0.080 0.0004631 0.0000784 30 0.10 711.367 150.359 2004-09-07T17:27:08.984676864 INFO 2025-11-06 15:27:51,942 AUV.py nudge_positions():203 [12046] 790: 0.090 0.0008348 -0.0000032 370 1.23 100.778 -0.487 2004-09-07T17:28:22.979607808 INFO 2025-11-06 15:27:51,986 AUV.py nudge_positions():203 [12046] 795: 0.090 0.0007736 0.0001328 20 0.06 1813.846 388.507 2004-09-07T17:28:30.979059712 INFO 2025-11-06 15:27:52,078 AUV.py nudge_positions():203 [12046] 805: 0.080 -0.0000080 0.0001431 300 1.00 -1.193 26.601 2004-09-07T17:29:39.984332544 INFO 2025-11-06 15:27:52,427 AUV.py nudge_positions():203 [12046] 841: 0.080 0.0000433 0.0000226 20 0.06 101.537 66.215 2004-09-07T17:30:18.981661056 INFO 2025-11-06 15:27:52,737 AUV.py nudge_positions():203 [12046] 874: 0.080 -0.0002492 -0.0003938 115 0.38 -97.367 -192.042 2004-09-07T17:31:13.977893632 INFO 2025-11-06 15:27:52,748 AUV.py nudge_positions():203 [12046] 875: 0.080 -0.0002163 -0.0004322 15 0.05 -688.370 -1716.171 2004-09-07T17:31:16.977688064 INFO 2025-11-06 15:27:52,761 AUV.py nudge_positions():203 [12046] 876: 0.090 0.0004178 -0.0000126 540 1.80 34.524 -1.304 2004-09-07T17:33:04.980289408 INFO 2025-11-06 15:27:52,853 AUV.py nudge_positions():203 [12046] 883: 0.080 0.0003524 -0.0000465 520 1.73 30.248 -4.983 2004-09-07T17:34:54.982753792 INFO 2025-11-06 15:27:52,876 AUV.py nudge_positions():203 [12046] 885: 0.080 0.0007400 -0.0000212 765 2.55 43.147 -1.544 2004-09-07T17:37:28.982203904 INFO 2025-11-06 15:28:25,731 AUV.py nudge_positions():203 [12046] 5843: 0.110 -0.0000061 0.0000363 85 0.28 -3.231 24.038 2004-09-07T19:00:22.981461760 INFO 2025-11-06 15:28:25,850 AUV.py nudge_positions():203 [12046] 5861: 0.090 -0.0000033 0.0000314 65 0.21 -2.274 27.254 2004-09-07T19:00:52.979406592 INFO 2025-11-06 15:28:27,530 AUV.py nudge_positions():203 [12046] 6127: 0.100 0.0000092 0.0000038 15 0.05 29.243 15.131 2004-09-07T19:05:22.980910336 INFO 2025-11-06 15:28:27,764 AUV.py nudge_positions():203 [12046] 6164: 0.110 -0.0000109 0.0000307 80 0.26 -6.147 21.622 2004-09-07T19:06:14.977348352 INFO 2025-11-06 15:28:33,286 AUV.py nudge_positions():203 [12046] 7040: 0.110 -0.0000155 0.0000100 20 0.06 -36.323 29.218 2004-09-07T19:20:53.977132800 INFO 2025-11-06 15:28:39,108 AUV.py nudge_positions():203 [12046] 7961: 0.110 0.0000150 0.0000079 15 0.05 47.865 31.458 2004-09-07T19:36:17.983833984 INFO 2025-11-06 15:28:41,300 AUV.py nudge_positions():203 [12046] 8311: 0.100 0.0000024 0.0000158 85 0.28 1.292 10.480 2004-09-07T19:42:24.978692992 INFO 2025-11-06 15:28:42,504 AUV.py nudge_positions():203 [12046] 8500: 0.100 0.0000107 -0.0000191 30 0.10 16.412 -36.702 2004-09-07T19:45:38.985402624 INFO 2025-11-06 15:28:48,105 AUV.py nudge_positions():203 [12046] 9371: 0.090 0.0000455 -0.0000150 35 0.11 59.577 -24.534 2004-09-07T20:00:15.985324160 INFO 2025-11-06 15:28:54,793 AUV.py nudge_positions():203 [12046] 10427: 0.110 0.0000109 0.0000387 60 0.20 8.227 36.442 2004-09-07T20:18:02.982229760 INFO 2025-11-06 15:29:02,422 AUV.py nudge_positions():203 [12046] 11616: 0.120 0.0000582 -0.0000232 30 0.10 89.352 -44.540 2004-09-07T20:37:57.980366720 INFO 2025-11-06 15:29:03,355 AUV.py nudge_positions():203 [12046] 11763: 0.110 0.0000373 -0.0000611 40 0.13 42.650 -87.124 2004-09-07T20:40:31.979817216 INFO 2025-11-06 15:29:07,466 AUV.py nudge_positions():203 [12046] 12391: 0.100 0.0000351 0.0000081 20 0.06 82.081 23.535 2004-09-07T20:51:02.986590208 INFO 2025-11-06 15:29:08,038 AUV.py nudge_positions():203 [12046] 12481: 0.110 0.0000570 0.0000039 25 0.08 105.753 9.136 2004-09-07T20:52:36.980151168 INFO 2025-11-06 15:29:08,906 AUV.py nudge_positions():203 [12046] 12616: 0.120 0.0000749 0.0002044 30 0.10 115.057 391.902 2004-09-07T20:54:56.980560512 INFO 2025-11-06 15:29:14,080 AUV.py nudge_positions():203 [12046] 13407: 0.110 0.0000488 0.0000059 25 0.08 90.539 13.564 2004-09-07T21:08:12.986030336 INFO 2025-11-06 15:29:14,310 AUV.py nudge_positions():203 [12046] 13438: 0.110 0.0000331 -0.0000199 15 0.05 105.349 -78.887 2004-09-07T21:08:45.983769856 INFO 2025-11-06 15:29:14,491 AUV.py nudge_positions():203 [12046] 13467: 0.110 0.0000729 -0.0000590 65 0.21 50.747 -51.213 2004-09-07T21:09:26.980961280 INFO 2025-11-06 15:29:21,387 AUV.py nudge_positions():203 [12046] 14565: 0.110 0.0001612 -0.0000915 35 0.11 211.195 -149.580 2004-09-07T21:27:50.985331968 INFO 2025-11-06 15:29:25,920 AUV.py nudge_positions():203 [12046] 15272: 0.100 0.0000454 -0.0000854 35 0.11 59.408 -139.511 2004-09-07T21:39:43.986488064 INFO 2025-11-06 15:29:51,831 AUV.py nudge_positions():203 [12046] 19371: 0.120 0.0000697 0.0000055 55 0.18 57.524 5.696 2004-09-07T22:48:12.985002240 INFO 2025-11-06 15:29:59,408 AUV.py nudge_positions():261 [12046] 20532: - - - 4 0.01 - - INFO 2025-11-06 15:29:59,408 AUV.py nudge_positions():267 [12046] Points in final series = 135948 WARNING 2025-11-06 15:30:12,927 AUV.py _create_nudge_plots():376 [12046] No map plot, could not import cartopy WARNING 2025-11-06 15:30:12,997 calibrate.py _depth_process():1925 [12046] Expected sample_rate to be 10 Hz, instead it's 5.00 Hz INFO 2025-11-06 15:30:13,106 calibrate.py _hs2_process():2132 [12046] Number of bad hs2 points: 2 of 108777 INFO 2025-11-06 15:30:13,546 calibrate.py _geometric_depth_correction():3155 [12046] hs2: d_beg_time_diff: 4 seconds, d_end_time_diff: 0 seconds INFO 2025-11-06 15:30:14,101 calibrate.py _geometric_depth_correction():3155 [12046] ctd1: d_beg_time_diff: 19 seconds, d_end_time_diff: -1 seconds INFO 2025-11-06 15:30:14,548 calibrate.py _geometric_depth_correction():3155 [12046] ctd1: d_beg_time_diff: 19 seconds, d_end_time_diff: -1 seconds INFO 2025-11-06 15:30:14,550 calibrate.py _ctd_process():2651 [12046] Performing range checking of ['ctd1_salinity'] in 2004.251.00/ctd1.nc INFO 2025-11-06 15:30:14,551 calibrate.py _range_qc_combined_nc():890 [12046] Setting 1 ctd1_salinity values to NaN INFO 2025-11-06 15:30:14,552 calibrate.py _range_qc_combined_nc():902 [12046] Checked for data outside of these variables and ranges: [('ctd1_salinity', Range(min=30, max=40))] INFO 2025-11-06 15:30:14,552 calibrate.py _range_qc_combined_nc():928 [12046] Done range checking ctd1 INFO 2025-11-06 15:30:15,101 calibrate.py _geometric_depth_correction():3155 [12046] ctd2: d_beg_time_diff: 28 seconds, d_end_time_diff: 0 seconds INFO 2025-11-06 15:30:15,534 calibrate.py _geometric_depth_correction():3155 [12046] ctd2: d_beg_time_diff: 28 seconds, d_end_time_diff: 0 seconds INFO 2025-11-06 15:30:15,536 calibrate.py _ctd_process():2651 [12046] Performing range checking of ['ctd2_salinity'] in 2004.251.00/ctd2.nc INFO 2025-11-06 15:30:15,537 calibrate.py _range_qc_combined_nc():890 [12046] Setting 0 ctd2_salinity values to NaN INFO 2025-11-06 15:30:15,537 calibrate.py _range_qc_combined_nc():902 [12046] Checked for data outside of these variables and ranges: [('ctd2_salinity', Range(min=30, max=40))] INFO 2025-11-06 15:30:15,537 calibrate.py _range_qc_combined_nc():928 [12046] Done range checking ctd2 INFO 2025-11-06 15:30:15,559 calibrate.py _biolume_process():2860 [12046] Checking for non-monotonic increasing time60hz INFO 2025-11-06 15:30:16,191 calibrate.py _biolume_process():2863 [12046] Removing non-monotonic increasing time60hz at indices: [ 186540 186541 186542 186543 186544 186545 186546 186547 186548 186549 186550 186551 186552 186553 186554 186555 186556 186557 186558 186559 186560 186561 186562 186563 186564 186565 186566 186567 186568 186569 316380 1632120 1632121 1632122 1632123 1632124 1632125 1632126] INFO 2025-11-06 15:30:16,320 calibrate.py _geometric_depth_correction():3155 [12046] biolume: d_beg_time_diff: -1 seconds, d_end_time_diff: -1 seconds ERROR 2025-11-06 15:30:16,324 calibrate.py process_logs():3280 [12046] Error processing biolume: missing variable "No variable named 'avg_biolume'. Variables on the dataset include ['time', 'rrr', 'cal_striing', 'pump', 'flow', 'humidity', 'temperature', 'time60hz', 'raw']" ERROR 2025-11-06 15:30:16,325 calibrate.py process_logs():3274 [12046] Error processing lopc: lopc has no orig_data - likely a missing or zero-sized .log file in missionlogs/2004.251.00 ERROR 2025-11-06 15:30:16,325 calibrate.py process_logs():3274 [12046] Error processing ecopuck: ecopuck has no orig_data - likely a missing or zero-sized .log file in missionlogs/2004.251.00 INFO 2025-11-06 15:30:16,385 calibrate.py write_netcdf():3240 [12046] Writing calibrated instrument data to /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_cal.nc INFO 2025-11-06 15:30:16,436 calibrate.py write_netcdf():3244 [12046] Data variables written: biolume_depth, biolume_flow, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, depth_filtdepth, depth_filtpres, depth_time, gps_latitude, gps_longitude, gps_time, hs2_bbp470, hs2_bbp676, hs2_depth, hs2_fl676, hs2_time, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_posx, navigation_posy, navigation_roll, navigation_time, navigation_yaw, nudged_latitude, nudged_longitude, tailcone_propRpm, tailcone_time, time INFO 2025-11-06 15:30:16,460 align.py process_cal():144 [12046] Processing /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_cal.nc INFO 2025-11-06 15:30:16,486 align.py process_cal():211 [12046] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-11-06 15:30:16,489 align.py process_cal():254 [12046] navigation_roll: instrument_sample_rate_hz = 5.00 INFO 2025-11-06 15:30:16,554 align.py process_cal():211 [12046] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-11-06 15:30:16,557 align.py process_cal():254 [12046] navigation_pitch: instrument_sample_rate_hz = 5.00 INFO 2025-11-06 15:30:16,617 align.py process_cal():211 [12046] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-11-06 15:30:16,620 align.py process_cal():254 [12046] navigation_yaw: instrument_sample_rate_hz = 5.00 INFO 2025-11-06 15:30:16,655 align.py process_cal():166 [12046] Skipping navigation_posx INFO 2025-11-06 15:30:16,655 align.py process_cal():166 [12046] Skipping navigation_posy INFO 2025-11-06 15:30:16,680 align.py process_cal():211 [12046] Using pitch corrected navigation_depth: mDepth from navigation.nc INFO 2025-11-06 15:30:16,684 align.py process_cal():254 [12046] navigation_mWaterSpeed: instrument_sample_rate_hz = 5.00 INFO 2025-11-06 15:30:16,744 align.py process_cal():211 [12046] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-11-06 15:30:16,747 align.py process_cal():254 [12046] hs2_bbp470: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:16,802 align.py process_cal():211 [12046] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-11-06 15:30:16,805 align.py process_cal():254 [12046] hs2_bbp676: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:16,860 align.py process_cal():211 [12046] Using pitch corrected hs2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to hs2_time and corrected for pitch using SensorOffset(x=0.1397, y=-0.2794) INFO 2025-11-06 15:30:16,863 align.py process_cal():254 [12046] hs2_fl676: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:16,917 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:16,921 align.py process_cal():254 [12046] ctd1_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:16,974 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:16,977 align.py process_cal():254 [12046] ctd1_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,033 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,036 align.py process_cal():254 [12046] ctd1_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,090 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,093 align.py process_cal():254 [12046] ctd1_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,147 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,151 align.py process_cal():254 [12046] ctd1_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,207 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,210 align.py process_cal():254 [12046] ctd1_dissolvedO2: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,266 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,269 align.py process_cal():254 [12046] ctd1_oxygen_mll: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,324 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,327 align.py process_cal():254 [12046] ctd1_oxygen_umolkg: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,383 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,386 align.py process_cal():254 [12046] ctd1_flow1: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,442 align.py process_cal():211 [12046] Using pitch corrected ctd1_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd1_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,445 align.py process_cal():254 [12046] ctd1_depth: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,500 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,503 align.py process_cal():254 [12046] ctd2_temperature: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,559 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,563 align.py process_cal():254 [12046] ctd2_conductivity: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,621 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,624 align.py process_cal():254 [12046] ctd2_salinity: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,681 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,684 align.py process_cal():254 [12046] ctd2_temperature_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,740 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,743 align.py process_cal():254 [12046] ctd2_conductivity_onboard: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,798 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,801 align.py process_cal():254 [12046] ctd2_flow2: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,857 align.py process_cal():211 [12046] Using pitch corrected ctd2_depth: Variable depth_filtdepth from dorado_2004.251.00_cal.nc linearly interpolated to ctd2_time and corrected for pitch using SensorOffset(x=1.003, y=0.0001) INFO 2025-11-06 15:30:17,860 align.py process_cal():254 [12046] ctd2_depth: instrument_sample_rate_hz = 4.00 INFO 2025-11-06 15:30:17,919 align.py process_cal():254 [12046] isus_nitrate: instrument_sample_rate_hz = 0.24 INFO 2025-11-06 15:30:17,960 align.py process_cal():254 [12046] isus_temp: instrument_sample_rate_hz = 0.24 INFO 2025-11-06 15:30:18,000 align.py process_cal():254 [12046] isus_quality: instrument_sample_rate_hz = 0.24 INFO 2025-11-06 15:30:18,043 align.py process_cal():254 [12046] biolume_flow: instrument_sample_rate_hz = 1.00 INFO 2025-11-06 15:30:18,086 align.py process_cal():254 [12046] tailcone_propRpm: instrument_sample_rate_hz = 5.00 INFO 2025-11-06 15:30:18,188 align.py write_netcdf():342 [12046] Writing aligned data to /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_align.nc INFO 2025-11-06 15:30:18,237 align.py write_netcdf():347 [12046] Data variables written: biolume_depth, biolume_flow, biolume_latitude, biolume_longitude, biolume_time, ctd1_conductivity, ctd1_conductivity_onboard, ctd1_depth, ctd1_dissolvedO2, ctd1_flow1, ctd1_latitude, ctd1_longitude, ctd1_oxygen_mll, ctd1_oxygen_umolkg, ctd1_salinity, ctd1_temperature, ctd1_temperature_onboard, ctd1_time, ctd2_conductivity, ctd2_conductivity_onboard, ctd2_depth, ctd2_flow2, ctd2_latitude, ctd2_longitude, ctd2_salinity, ctd2_temperature, ctd2_temperature_onboard, ctd2_time, hs2_bbp470, hs2_bbp676, hs2_depth, hs2_fl676, hs2_latitude, hs2_longitude, hs2_time, isus_depth, isus_latitude, isus_longitude, isus_nitrate, isus_quality, isus_temp, isus_time, navigation_depth, navigation_latitude, navigation_longitude, navigation_mWaterSpeed, navigation_pitch, navigation_roll, navigation_time, navigation_yaw, tailcone_depth, tailcone_latitude, tailcone_longitude, tailcone_propRpm, tailcone_time INFO 2025-11-06 15:30:18,238 resample.py resample_mission():1185 [12046] Using depth_threshold = 10.00 m INFO 2025-11-06 15:30:18,265 resample.py instruments_variables():235 [12046] Reading variables from /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_align.nc mission netCDF file INFO 2025-11-06 15:30:18,271 resample.py instruments_variables():235 [12046] Reading variables from /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_align.nc mission netCDF file INFO 2025-11-06 15:30:18,273 resample.py get_mission_start_end():1145 [12046] navigation: 2004-09-07T15:34:45.986603776 to 2004-09-07T23:07:55.783975168 (0 days 00:00:00 before mission_end) INFO 2025-11-06 15:30:18,275 resample.py get_mission_start_end():1145 [12046] hs2 : 2004-09-07T15:34:29.617725184 to 2004-09-07T23:07:55.743977728 (0 days 00:00:00.039997440 before mission_end) INFO 2025-11-06 15:30:18,277 resample.py get_mission_start_end():1145 [12046] ctd1 : 2004-09-07T15:34:44.996671616 to 2004-09-07T23:07:55.653983872 (0 days 00:00:00.129991296 before mission_end) INFO 2025-11-06 15:30:18,279 resample.py get_mission_start_end():1145 [12046] ctd2 : 2004-09-07T15:34:53.686076416 to 2004-09-07T23:07:55.783975168 (0 days 00:00:00 before mission_end) INFO 2025-11-06 15:30:18,280 resample.py get_mission_start_end():1145 [12046] isus : 2004-09-07T01:12:37.000000000 to 2004-09-07T23:07:51.000000000 (0 days 00:00:04.783975168 before mission_end) INFO 2025-11-06 15:30:18,282 resample.py get_mission_start_end():1145 [12046] biolume : 2004-09-07T15:34:24.488042368 to 2004-09-07T23:07:55.153983872 (0 days 00:00:00.629991296 before mission_end) INFO 2025-11-06 15:30:18,284 resample.py get_mission_start_end():1145 [12046] tailcone : 2004-09-07T15:34:23.818122368 to 2004-09-07T23:07:55.733978496 (0 days 00:00:00.049996672 before mission_end) INFO 2025-11-06 15:30:18,285 resample.py instruments_variables():235 [12046] Reading variables from /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_align.nc mission netCDF file INFO 2025-11-06 15:30:18,287 resample.py resample_coordinates():249 [12046] Resampling coordinates depth, latitude and longitude with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,447 resample.py resample_variable():1031 [12046] Resampling navigation_roll with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,475 resample.py resample_variable():1031 [12046] Resampling navigation_pitch with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,502 resample.py resample_variable():1031 [12046] Resampling navigation_yaw with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,530 resample.py resample_variable():1031 [12046] Resampling navigation_mWaterSpeed with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,557 resample.py resample_variable():1031 [12046] Resampling hs2_bbp470 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,584 resample.py resample_variable():1031 [12046] Resampling hs2_bbp676 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,611 resample.py resample_variable():1031 [12046] Resampling hs2_fl676 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,637 resample.py resample_variable():1031 [12046] Resampling ctd1_temperature with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,660 resample.py resample_variable():1031 [12046] Resampling ctd1_conductivity with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,682 resample.py resample_variable():1031 [12046] Resampling ctd1_salinity with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,705 resample.py resample_variable():1031 [12046] Resampling ctd1_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,727 resample.py resample_variable():1031 [12046] Resampling ctd1_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,749 resample.py resample_variable():1031 [12046] Resampling ctd1_dissolvedO2 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,771 resample.py resample_variable():1031 [12046] Resampling ctd1_oxygen_mll with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,793 resample.py resample_variable():1031 [12046] Resampling ctd1_oxygen_umolkg with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,816 resample.py resample_variable():1031 [12046] Resampling ctd1_flow1 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,840 resample.py resample_variable():1031 [12046] Resampling ctd2_temperature with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,864 resample.py resample_variable():1031 [12046] Resampling ctd2_conductivity with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,888 resample.py resample_variable():1031 [12046] Resampling ctd2_salinity with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,911 resample.py resample_variable():1031 [12046] Resampling ctd2_temperature_onboard with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,934 resample.py resample_variable():1031 [12046] Resampling ctd2_conductivity_onboard with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,960 resample.py resample_variable():1031 [12046] Resampling ctd2_flow2 with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,972 resample.py resample_variable():1031 [12046] Resampling isus_nitrate with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,982 resample.py resample_variable():1031 [12046] Resampling isus_temp with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:18,991 resample.py resample_variable():1031 [12046] Resampling isus_quality with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:19,002 resample.py resample_variable():1031 [12046] Resampling biolume_flow with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:19,027 resample.py resample_variable():1031 [12046] Resampling tailcone_propRpm with frequency 1S following 3 point median filter INFO 2025-11-06 15:30:19,217 resample.py resample_mission():1297 [12046] Saved resampled mission to /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_1S.nc INFO 2025-11-06 15:30:22,259 create_products.py gulper_odv():401 [12046] No gulper times found for 2004.251.00 INFO 2025-11-06 15:30:22,265 archive.py copy_to_AUVTCD():62 [12046] Archiving /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00 files to /Volumes/AUVCTD/surveys/2004/netcdf INFO 2025-11-06 15:30:22,267 archive.py copy_to_AUVTCD():80 [12046] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.251.00_1S.nc INFO 2025-11-06 15:30:22,349 archive.py copy_to_AUVTCD():84 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_1S.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-11-06 15:30:22,351 archive.py copy_to_AUVTCD():80 [12046] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.251.00_cal.nc INFO 2025-11-06 15:30:22,738 archive.py copy_to_AUVTCD():84 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_cal.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-11-06 15:30:22,739 archive.py copy_to_AUVTCD():80 [12046] Removing /Volumes/AUVCTD/surveys/2004/netcdf/dorado_2004.251.00_align.nc INFO 2025-11-06 15:30:23,125 archive.py copy_to_AUVTCD():84 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_align.nc /Volumes/AUVCTD/surveys/2004/netcdf done. INFO 2025-11-06 15:30:23,237 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/ctdDriver.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,345 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/ctdDriver2.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,380 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/gps.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,456 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/hydroscatlog.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,668 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/navigation.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,694 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/isuslog.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,774 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/parosci.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:23,867 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/tailCone.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:24,130 archive.py copy_to_AUVTCD():110 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/biolume.nc /Volumes/AUVCTD/missionnetcdfs/2004/2004251/2004.251.00 done. INFO 2025-11-06 15:30:24,130 archive.py copy_to_AUVTCD():118 [12046] Archiving product files INFO 2025-11-06 15:30:24,130 archive.py copy_to_AUVTCD():163 [12046] copyfile /Users/mccann/GitHub/auv-python/data/auv_data/dorado/missionnetcdfs/2004.251.00/dorado_2004.251.00_processing.log /Volumes/AUVCTD/surveys/2004/netcdf