2018-09-25T22:12:41.038Z,1537913561.038 [Supervisor](DEBUG): Initializing supervisor.
2018-09-25T22:12:41.040Z,1537913561.040 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-09-25T22:12:41.041Z,1537913561.041 [SyncHandler](INFO): Protected caller Thread ID is 2095
2018-09-25T22:12:41.041Z,1537913561.041 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-09-25T22:12:41.042Z,1537913561.042 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-09-25T22:12:41.043Z,1537913561.043 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 2096
2018-09-25T22:12:41.045Z,1537913561.045 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-09-25T22:12:41.057Z,1537913561.057 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-09-25T22:12:41.058Z,1537913561.058 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-09-25T22:12:41.058Z,1537913561.058 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 2097
2018-09-25T22:12:41.059Z,1537913561.059 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-09-25T22:12:41.060Z,1537913561.060 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-09-25T22:12:41.060Z,1537913561.060 [logger ThreadHandler](INFO): Protected caller Thread ID is 2098
2018-09-25T22:12:41.062Z,1537913561.062 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-09-25T22:12:41.063Z,1537913561.063 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-09-25T22:12:41.064Z,1537913561.064 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-09-25T22:12:41.253Z,1537913561.253 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-09-25T22:12:41.253Z,1537913561.253 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-09-25T22:12:41.397Z,1537913561.397 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-09-25T22:12:41.398Z,1537913561.398 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-09-25T22:12:41.745Z,1537913561.745 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-09-25T22:12:41.745Z,1537913561.745 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-09-25T22:12:41.884Z,1537913561.884 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-09-25T22:12:41.885Z,1537913561.885 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-09-25T22:12:41.965Z,1537913561.965 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-09-25T22:12:42.168Z,1537913562.168 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-09-25T22:12:42.168Z,1537913562.168 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-09-25T22:12:42.266Z,1537913562.266 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-09-25T22:12:42.267Z,1537913562.267 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-09-25T22:12:42.613Z,1537913562.613 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-09-25T22:12:42.613Z,1537913562.613 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-09-25T22:12:43.072Z,1537913563.072 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-09-25T22:12:43.073Z,1537913563.073 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-09-25T22:12:43.389Z,1537913563.389 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-09-25T22:12:43.389Z,1537913563.389 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-09-25T22:12:43.893Z,1537913563.893 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-09-25T22:12:43.894Z,1537913563.894 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-09-25T22:12:44.101Z,1537913564.101 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-09-25T22:12:44.102Z,1537913564.102 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-09-25T22:12:44.200Z,1537913564.200 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-09-25T22:12:44.201Z,1537913564.201 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-09-25T22:12:44.694Z,1537913564.694 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-09-25T22:12:44.695Z,1537913564.695 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-09-25T22:12:44.801Z,1537913564.801 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-09-25T22:12:44.803Z,1537913564.803 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-whoidhs/
2018-09-25T22:12:44.804Z,1537913564.804 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Battery.cfg
2018-09-25T22:12:45.034Z,1537913565.034 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-09-25T22:12:45.034Z,1537913565.034 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/BIT.cfg
2018-09-25T22:12:45.207Z,1537913565.207 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Navigation.cfg
2018-09-25T22:12:45.301Z,1537913565.301 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Control.cfg
2018-09-25T22:12:45.404Z,1537913565.404 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Simulator.cfg
2018-09-25T22:12:45.489Z,1537913565.489 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Science.cfg
2018-09-25T22:12:45.624Z,1537913565.624 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Sensor.cfg
2018-09-25T22:12:45.793Z,1537913565.793 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Servo.cfg
2018-09-25T22:12:45.904Z,1537913565.904 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/logger.cfg
2018-09-25T22:12:45.992Z,1537913565.992 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/secure.cfg
2018-09-25T22:12:46.076Z,1537913566.076 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/vehicle.cfg
2018-09-25T22:12:46.269Z,1537913566.269 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-whoidhs/root/
2018-09-25T22:12:46.269Z,1537913566.269 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-09-25T22:12:46.283Z,1537913566.283 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-09-25T22:12:46.585Z,1537913566.585 [SBIT](DEBUG): Construct Startup Built In Test.
2018-09-25T22:12:46.615Z,1537913566.615 [SBIT] Loaded
2018-09-25T22:12:46.615Z,1537913566.615 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-09-25T22:12:46.616Z,1537913566.616 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-09-25T22:12:46.644Z,1537913566.644 [IBIT] Loaded
2018-09-25T22:12:46.644Z,1537913566.644 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-09-25T22:12:46.647Z,1537913566.647 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-09-25T22:12:46.804Z,1537913566.804 [CBIT] Loaded
2018-09-25T22:12:46.804Z,1537913566.804 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-09-25T22:12:46.804Z,1537913566.804 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-09-25T22:12:46.805Z,1537913566.805 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-09-25T22:12:46.872Z,1537913566.872 [VerticalControl](DEBUG): Construct VerticalControl.
2018-09-25T22:12:46.973Z,1537913566.973 [VerticalControl] Loaded
2018-09-25T22:12:46.973Z,1537913566.973 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-09-25T22:12:46.974Z,1537913566.974 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-09-25T22:12:47.035Z,1537913567.035 [HorizontalControl] Loaded
2018-09-25T22:12:47.035Z,1537913567.035 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-09-25T22:12:47.035Z,1537913567.035 [SpeedControl](DEBUG): Construct SpeedControl.
2018-09-25T22:12:47.041Z,1537913567.041 [SpeedControl] Loaded
2018-09-25T22:12:47.041Z,1537913567.041 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-09-25T22:12:47.042Z,1537913567.042 [LoopControl](DEBUG): Construct LoopControl.
2018-09-25T22:12:47.042Z,1537913567.042 [LoopControl] Loaded
2018-09-25T22:12:47.043Z,1537913567.043 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-09-25T22:12:47.043Z,1537913567.043 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-09-25T22:12:47.044Z,1537913567.044 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-09-25T22:12:47.085Z,1537913567.085 [DepthRateCalculator] Loaded
2018-09-25T22:12:47.085Z,1537913567.085 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-09-25T22:12:47.091Z,1537913567.091 [PitchRateCalculator] Loaded
2018-09-25T22:12:47.091Z,1537913567.091 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-09-25T22:12:47.107Z,1537913567.107 [SpeedCalculator] Loaded
2018-09-25T22:12:47.107Z,1537913567.107 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-09-25T22:12:47.128Z,1537913567.128 [TempGradientCalculator] Loaded
2018-09-25T22:12:47.128Z,1537913567.128 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-09-25T22:12:47.134Z,1537913567.134 [YawRateCalculator] Loaded
2018-09-25T22:12:47.134Z,1537913567.134 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-09-25T22:12:47.163Z,1537913567.163 [ElevatorOffsetCalculator] Loaded
2018-09-25T22:12:47.164Z,1537913567.164 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-09-25T22:12:47.164Z,1537913567.164 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-09-25T22:12:47.165Z,1537913567.165 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-09-25T22:12:47.229Z,1537913567.229 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-09-25T22:12:47.229Z,1537913567.229 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-09-25T22:12:47.469Z,1537913567.469 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-09-25T22:12:47.470Z,1537913567.470 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-09-25T22:12:47.567Z,1537913567.567 [DeadReckonUsingMultipleVelocitySources] Loaded
2018-09-25T22:12:47.567Z,1537913567.567 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2018-09-25T22:12:47.622Z,1537913567.622 [DeadReckonUsingSpeedCalculator] Loaded
2018-09-25T22:12:47.622Z,1537913567.622 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-09-25T22:12:47.639Z,1537913567.639 [NavChart] Loaded
2018-09-25T22:12:47.639Z,1537913567.639 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-09-25T22:12:47.643Z,1537913567.643 [UniversalFixResidualReporter] Loaded
2018-09-25T22:12:47.643Z,1537913567.643 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-09-25T22:12:47.644Z,1537913567.644 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-09-25T22:12:47.644Z,1537913567.644 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-09-25T22:12:47.658Z,1537913567.658 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-09-25T22:12:47.658Z,1537913567.658 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-09-25T22:12:47.828Z,1537913567.828 [Aanderaa_O2] Loaded
2018-09-25T22:12:47.828Z,1537913567.828 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-09-25T22:12:47.907Z,1537913567.907 [CTD_NeilBrown] Loaded
2018-09-25T22:12:47.908Z,1537913567.908 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-09-25T22:12:47.909Z,1537913567.909 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 406DB4E0
2018-09-25T22:12:47.909Z,1537913567.909 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 2177
2018-09-25T22:12:47.955Z,1537913567.955 [WetLabsSeaOWL_UV_A] Loaded
2018-09-25T22:12:47.955Z,1537913567.955 [ComponentRegistry](DEBUG): Component "WetLabsSeaOWL_UV_A" handled in its own thread.
2018-09-25T22:12:47.956Z,1537913567.956 [WetLabsSeaOWL_UV_A ThreadHandler](DEBUG): Created PCaller Thread at 4070B4E0
2018-09-25T22:12:47.956Z,1537913567.956 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Protected caller Thread ID is 2178
2018-09-25T22:12:47.957Z,1537913567.957 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-09-25T22:12:47.958Z,1537913567.958 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-09-25T22:12:48.313Z,1537913568.313 [AHRS_M2] Loaded
2018-09-25T22:12:48.314Z,1537913568.314 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2018-09-25T22:12:48.384Z,1537913568.384 [DataOverHttps] Loaded
2018-09-25T22:12:48.384Z,1537913568.384 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-09-25T22:12:48.397Z,1537913568.397 [Depth_Keller] Loaded
2018-09-25T22:12:48.397Z,1537913568.397 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-09-25T22:12:48.402Z,1537913568.402 [DropWeight] Loaded
2018-09-25T22:12:48.402Z,1537913568.402 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-09-25T22:12:48.495Z,1537913568.495 [NAL9602] Loaded
2018-09-25T22:12:48.495Z,1537913568.495 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-09-25T22:12:48.501Z,1537913568.501 [Onboard] Loaded
2018-09-25T22:12:48.501Z,1537913568.501 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-09-25T22:12:48.508Z,1537913568.508 [Radio_Surface] Loaded
2018-09-25T22:12:48.508Z,1537913568.508 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-09-25T22:12:48.509Z,1537913568.509 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4096C4E0
2018-09-25T22:12:48.510Z,1537913568.510 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 2179
2018-09-25T22:12:48.538Z,1537913568.538 [RDI_Pathfinder] Loaded
2018-09-25T22:12:48.538Z,1537913568.538 [ComponentRegistry](DEBUG): SyncComponent "RDI_Pathfinder" handled in the control thread.
2018-09-25T22:12:48.545Z,1537913568.545 [SCPI] Loaded
2018-09-25T22:12:48.545Z,1537913568.545 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2018-09-25T22:12:50.569Z,1537913570.569 [BPC1] Loaded
2018-09-25T22:12:50.569Z,1537913570.569 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-09-25T22:12:50.569Z,1537913570.569 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-09-25T22:12:50.570Z,1537913570.570 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-09-25T22:12:50.669Z,1537913570.669 [BuoyancyServo] Loaded
2018-09-25T22:12:50.670Z,1537913570.670 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-09-25T22:12:50.681Z,1537913570.681 [ElevatorServo] Loaded
2018-09-25T22:12:50.681Z,1537913570.681 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-09-25T22:12:50.692Z,1537913570.692 [MassServo] Loaded
2018-09-25T22:12:50.692Z,1537913570.692 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-09-25T22:12:50.704Z,1537913570.704 [RudderServo] Loaded
2018-09-25T22:12:50.704Z,1537913570.704 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-09-25T22:12:50.715Z,1537913570.715 [ThrusterServo] Loaded
2018-09-25T22:12:50.716Z,1537913570.716 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-09-25T22:12:50.716Z,1537913570.716 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-09-25T22:12:50.717Z,1537913570.717 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-09-25T22:12:50.816Z,1537913570.816 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-09-25T22:12:50.817Z,1537913570.817 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-09-25T22:12:50.841Z,1537913570.841 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-09-25T22:12:50.845Z,1537913570.845 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-09-25T22:12:50.846Z,1537913570.846 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-09-25T22:12:50.852Z,1537913570.852 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-09-25T22:12:50.853Z,1537913570.853 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A154E0
2018-09-25T22:12:50.854Z,1537913570.854 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 2180
2018-09-25T22:12:50.858Z,1537913570.858 [Supervisor](INFO): Main Thread ID is 1255
2018-09-25T22:12:50.858Z,1537913570.858 [Supervisor](DEBUG): Running supervisor.
2018-09-25T22:12:50.859Z,1537913570.859 [CommandLine ThreadHandler](INFO): Handler Thread ID is 2181
2018-09-25T22:12:50.863Z,1537913570.863 [controlThread ThreadHandler](INFO): Handler Thread ID is 2182
2018-09-25T22:12:50.863Z,1537913570.863 [controlThread](DEBUG): Initializing ControlThread
2018-09-25T22:12:50.864Z,1537913570.864 [SBIT](INFO): Initialize SBIT Component.
2018-09-25T22:12:50.864Z,1537913570.864 [SBIT](IMPORTANT): git: 2018-09-20-18-g38f2163
2018-09-25T22:12:50.864Z,1537913570.864 [SBIT](INFO): git hash: 38f216369afaecca05f3bf013f3903b12f5d6ffb
2018-09-25T22:12:50.865Z,1537913570.865 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-09-25T22:12:50.865Z,1537913570.865 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-09-25T22:12:50.866Z,1537913570.866 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2018-09-25T22:12:50.867Z,1537913570.867 [IBIT](INFO): Initialize IBIT Component.
2018-09-25T22:12:50.868Z,1537913570.868 [CBIT](DEBUG): Initialize CBIT Component.
2018-09-25T22:12:50.868Z,1537913570.868 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-09-25T22:12:50.869Z,1537913570.869 [logger ThreadHandler](INFO): Handler Thread ID is 2183
2018-09-25T22:12:50.897Z,1537913570.897 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 2184
2018-09-25T22:12:50.898Z,1537913570.898 [CTD_NeilBrown](INFO): Powering down
2018-09-25T22:12:50.933Z,1537913570.933 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Handler Thread ID is 2185
2018-09-25T22:12:50.934Z,1537913570.934 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:12:50.973Z,1537913570.973 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-09-25T22:12:50.975Z,1537913570.975 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-09-25T22:12:50.976Z,1537913570.976 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-09-25T22:12:50.976Z,1537913570.976 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-09-25T22:12:50.976Z,1537913570.976 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-25T22:12:50.977Z,1537913570.977 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-09-25T22:12:50.977Z,1537913570.977 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-09-25T22:12:50.977Z,1537913570.977 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-09-25T22:12:50.978Z,1537913570.978 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-09-25T22:12:50.978Z,1537913570.978 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-09-25T22:12:50.979Z,1537913570.979 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:12:50.980Z,1537913570.980 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:12:50.980Z,1537913570.980 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:12:50.980Z,1537913570.980 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:12:50.981Z,1537913570.981 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:12:50.981Z,1537913570.981 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:12:50.982Z,1537913570.982 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-09-25T22:12:50.982Z,1537913570.982 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-09-25T22:12:50.990Z,1537913570.990 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-09-25T22:12:50.997Z,1537913570.997 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 2186
2018-09-25T22:12:51.003Z,1537913571.003 [Radio_Surface](INFO): Powering up
2018-09-25T22:12:51.012Z,1537913571.012 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T22:12:51.017Z,1537913571.017 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 2187
2018-09-25T22:12:51.020Z,1537913571.020 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-09-25T22:12:51.020Z,1537913571.020 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-09-25T22:12:51.021Z,1537913571.021 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-09-25T22:12:51.021Z,1537913571.021 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-09-25T22:12:51.021Z,1537913571.021 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-09-25T22:12:51.022Z,1537913571.022 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-09-25T22:12:51.022Z,1537913571.022 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-09-25T22:12:51.022Z,1537913571.022 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-09-25T22:12:51.022Z,1537913571.022 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-09-25T22:12:51.022Z,1537913571.022 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-09-25T22:12:51.023Z,1537913571.023 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-09-25T22:12:51.023Z,1537913571.023 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-09-25T22:12:51.023Z,1537913571.023 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-09-25T22:12:51.023Z,1537913571.023 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-09-25T22:12:51.023Z,1537913571.023 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-09-25T22:12:51.024Z,1537913571.024 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-09-25T22:12:51.060Z,1537913571.060 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-09-25T22:12:51.085Z,1537913571.085 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-09-25T22:12:51.160Z,1537913571.160 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-09-25T22:12:51.169Z,1537913571.169 [Default:A.Wait](DEBUG): Construct Wait.
2018-09-25T22:12:51.171Z,1537913571.171 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T22:12:51.199Z,1537913571.199 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-09-25T22:12:51.217Z,1537913571.217 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-09-25T22:12:51.223Z,1537913571.223 [Default:E.Execute](DEBUG): Construct Execute.
2018-09-25T22:12:51.243Z,1537913571.243 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-09-25T22:12:51.248Z,1537913571.248 [controlThread](DEBUG): Component order: CycleStarter,Aanderaa_O2,AHRS_M2,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,RDI_Pathfinder,SCPI,BPC1,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-09-25T22:12:51.315Z,1537913571.315 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2018-09-25T22:12:51.409Z,1537913571.409 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-09-25T22:12:51.470Z,1537913571.470 [Depth_Keller](ERROR): Pressure reading out of range: 1913.424561 decibar
2018-09-25T22:12:51.681Z,1537913571.681 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-25T22:12:51.752Z,1537913571.752 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:51.777Z,1537913571.777 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:51.885Z,1537913571.885 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:51.893Z,1537913571.893 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-25T22:12:51.916Z,1537913571.916 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:51.921Z,1537913571.921 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-09-25T22:12:51.935Z,1537913571.935 [MassServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:51.941Z,1537913571.941 [MassServo](DEBUG): Initializing MassServo.
2018-09-25T22:12:51.958Z,1537913571.958 [RudderServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:51.965Z,1537913571.965 [RudderServo](DEBUG): Initializing RudderServo.
2018-09-25T22:12:51.983Z,1537913571.983 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:51.989Z,1537913571.989 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-25T22:12:52.242Z,1537913572.242 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-25T22:12:52.253Z,1537913572.253 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:52.255Z,1537913572.255 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:52.517Z,1537913572.517 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:52.519Z,1537913572.519 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:52.853Z,1537913572.853 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-09-25T22:12:52.853Z,1537913572.853 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-09-25T22:12:52.853Z,1537913572.853 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-25T22:12:52.853Z,1537913572.853 [BuoyancyServo](ERROR): Communications Fault
2018-09-25T22:12:53.065Z,1537913573.065 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-25T22:12:53.117Z,1537913573.117 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:53.118Z,1537913573.118 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:53.131Z,1537913573.131 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-25T22:12:53.131Z,1537913573.131 [BuoyancyServo](INFO): Powering down
2018-09-25T22:12:53.500Z,1537913573.500 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:53.501Z,1537913573.501 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:53.904Z,1537913573.904 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:53.905Z,1537913573.905 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:54.304Z,1537913574.304 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:54.305Z,1537913574.305 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:54.793Z,1537913574.793 [Aanderaa_O2](INFO): Powering down
2018-09-25T22:12:54.916Z,1537913574.916 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:54.933Z,1537913574.933 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:55.137Z,1537913575.137 [AHRS_M2](ERROR): Read RFS packet UART error: serial timeout
2018-09-25T22:12:55.180Z,1537913575.180 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:55.182Z,1537913575.182 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T22:12:55.231Z,1537913575.231 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-25T22:12:55.231Z,1537913575.231 [BuoyancyServo] No Fault, FailCount= 1
2018-09-25T22:12:55.516Z,1537913575.516 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-25T22:12:55.634Z,1537913575.634 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-25T22:13:04.785Z,1537913584.785 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-25T22:13:11.220Z,1537913591.220 [SBIT](IMPORTANT): Beginning Startup BIT
2018-09-25T22:13:11.241Z,1537913591.241 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-25T22:13:18.503Z,1537913598.503 [NAL9602](INFO): Powering up NAL9602
2018-09-25T22:13:22.215Z,1537913602.215 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.008349
CHAN A1 (24V): 0.003686
CHAN A2 (12V): -0.007318
CHAN A3 (5V): -0.002260
CHAN B0 (3.3V): 0.000472
CHAN B1 (3.15aV): 0.000310
CHAN B2 (3.15bV): 0.000152
CHAN B3 (GND): 0.002446
OPEN: 0.005030
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-25T22:13:29.495Z,1537913609.495 [NAL9602](INFO): NAL9602 initialized
2018-09-25T22:13:31.162Z,1537913611.162 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0ffd, 15.853, -0.003, 0.000
2018-09-25T22:14:05.430Z,1537913645.430 [SBIT](IMPORTANT): SBIT PASSED
2018-09-25T22:14:05.509Z,1537913645.509 [CommandLine](IMPORTANT): got command configSet list
2018-09-25T22:14:05.509Z,1537913645.509 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-25T22:14:05.510Z,1537913645.510 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CBIT.gf24Offset=-28 microampere;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=0 bool;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound=-10 practical_salinity_unit;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): CTD_Seabird.simulateHardware=1 bool;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter;

2018-09-25T22:14:05.511Z,1537913645.511 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter;

2018-09-25T22:14:05.512Z,1537913645.512 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-09-25T22:14:05.512Z,1537913645.512 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt;

2018-09-25T22:14:05.512Z,1537913645.512 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool;

2018-09-25T22:14:05.512Z,1537913645.512 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter;

2018-09-25T22:14:05.512Z,1537913645.512 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter;

2018-09-25T22:14:05.795Z,1537913645.795 [MissionManager](IMPORTANT): Started mission Startup
2018-09-25T22:14:05.795Z,1537913645.795 [Startup] Running Loop=1
2018-09-25T22:14:05.795Z,1537913645.795 [Startup](DEBUG): Aggregate::initialize Startup
2018-09-25T22:14:05.796Z,1537913645.796 [Startup:A.GoToSurface] Running Loop=1
2018-09-25T22:14:05.796Z,1537913645.796 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T22:14:05.796Z,1537913645.796 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T22:14:05.797Z,1537913645.797 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T22:14:05.797Z,1537913645.797 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T22:14:05.798Z,1537913645.798 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T22:14:05.798Z,1537913645.798 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T22:14:05.804Z,1537913645.804 [Startup:StartupSatComms] Running Loop=1
2018-09-25T22:14:05.804Z,1537913645.804 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-09-25T22:14:05.804Z,1537913645.804 [Startup:StartupSatComms:A] Running Loop=1
2018-09-25T22:14:06.133Z,1537913646.133 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-25T22:15:06.138Z,1537913706.138 [Startup:StartupSatComms:A](INFO): Timed out from 2018-09-25T22:14:05.8Z
2018-09-25T22:15:06.138Z,1537913706.138 [Startup:StartupSatComms:A] Stopped
2018-09-25T22:15:06.138Z,1537913706.138 [Startup:StartupSatComms:B] Running Loop=1
2018-09-25T22:15:06.521Z,1537913706.521 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-25T22:15:28.105Z,1537913728.105 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-25T22:15:28.106Z,1537913728.106 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092515203437,.1,   0.0,10
2018-09-25T22:15:41.814Z,1537913741.814 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-25T22:15:41.814Z,1537913741.814 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-25T22:15:42.192Z,1537913742.192 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-25T22:15:42.200Z,1537913742.200 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-25T22:15:42.203Z,1537913742.203 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-25T22:15:42.214Z,1537913742.214 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-25T22:15:42.222Z,1537913742.222 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-25T22:15:42.229Z,1537913742.229 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-25T22:15:42.241Z,1537913742.241 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.000000 cm
2018-09-25T22:15:42.249Z,1537913742.249 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 205.000004 cc
2018-09-25T22:15:42.252Z,1537913742.252 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-25T22:15:42.260Z,1537913742.260 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-25T22:15:42.268Z,1537913742.268 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-25T22:15:42.279Z,1537913742.279 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-25T22:15:42.284Z,1537913742.284 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-25T22:15:42.295Z,1537913742.295 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-25T22:15:42.304Z,1537913742.304 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-25T22:15:42.315Z,1537913742.315 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-25T22:15:42.319Z,1537913742.319 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-25T22:15:42.338Z,1537913742.338 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-25T22:15:42.350Z,1537913742.350 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-25T22:15:42.357Z,1537913742.357 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-25T22:15:42.360Z,1537913742.360 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = 0.000000 min
2018-09-25T22:15:42.371Z,1537913742.371 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-25T22:15:42.374Z,1537913742.374 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-25T22:15:42.381Z,1537913742.381 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-25T22:15:42.389Z,1537913742.389 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-25T22:15:42.392Z,1537913742.392 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-25T22:15:42.399Z,1537913742.399 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-25T22:15:42.403Z,1537913742.403 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-25T22:15:42.414Z,1537913742.414 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-25T22:15:42.421Z,1537913742.421 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-25T22:15:42.424Z,1537913742.424 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-25T22:15:42.451Z,1537913742.451 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-25T22:15:42.503Z,1537913742.503 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-25T22:15:42.526Z,1537913742.526 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-25T22:15:42.535Z,1537913742.535 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-25T22:15:42.539Z,1537913742.539 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-25T22:15:42.551Z,1537913742.551 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-25T22:15:42.552Z,1537913742.552 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-25T22:15:42.574Z,1537913742.574 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-25T22:15:42.597Z,1537913742.597 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-25T22:15:42.647Z,1537913742.647 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-25T22:15:42.651Z,1537913742.651 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-25T22:15:42.663Z,1537913742.663 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-25T22:15:42.666Z,1537913742.666 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-25T22:15:42.669Z,1537913742.669 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-25T22:15:42.670Z,1537913742.670 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T22:15:42.728Z,1537913742.728 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-25T22:15:42.731Z,1537913742.731 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-25T22:15:42.745Z,1537913742.745 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-25T22:15:42.746Z,1537913742.746 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-25T22:15:42.818Z,1537913742.818 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-25T22:15:42.822Z,1537913742.822 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-25T22:15:42.867Z,1537913742.867 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-25T22:15:42.870Z,1537913742.870 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-25T22:15:42.913Z,1537913742.913 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-25T22:15:42.914Z,1537913742.914 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T22:15:42.979Z,1537913742.979 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-25T22:15:42.985Z,1537913742.985 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-25T22:15:43.003Z,1537913743.003 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-25T22:15:43.030Z,1537913743.030 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-25T22:15:43.069Z,1537913743.069 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-25T22:15:43.079Z,1537913743.079 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-25T22:15:43.098Z,1537913743.098 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-25T22:15:43.651Z,1537913743.651 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-25T22:15:43.659Z,1537913743.659 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-25T22:15:43.663Z,1537913743.663 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-25T22:15:43.696Z,1537913743.696 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-25T22:15:43.717Z,1537913743.717 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-25T22:15:43.720Z,1537913743.720 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-25T22:15:43.742Z,1537913743.742 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-25T22:15:43.749Z,1537913743.749 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-25T22:15:43.752Z,1537913743.752 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-25T22:15:43.759Z,1537913743.759 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-25T22:15:43.764Z,1537913743.764 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-25T22:15:43.774Z,1537913743.774 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-25T22:15:43.781Z,1537913743.781 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-25T22:15:43.784Z,1537913743.784 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-25T22:15:43.792Z,1537913743.792 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-25T22:15:43.804Z,1537913743.804 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-25T22:15:43.808Z,1537913743.808 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-25T22:15:43.820Z,1537913743.820 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-25T22:15:43.839Z,1537913743.839 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-25T22:15:43.842Z,1537913743.842 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-25T22:15:43.846Z,1537913743.846 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-25T22:15:43.870Z,1537913743.870 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-25T22:15:43.873Z,1537913743.873 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-25T22:15:43.876Z,1537913743.876 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-25T22:15:43.879Z,1537913743.879 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-25T22:15:43.902Z,1537913743.902 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-25T22:15:43.905Z,1537913743.905 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-25T22:15:43.908Z,1537913743.908 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-25T22:15:43.912Z,1537913743.912 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-25T22:15:43.935Z,1537913743.935 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-25T22:15:43.938Z,1537913743.938 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-25T22:15:43.942Z,1537913743.942 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-25T22:15:43.945Z,1537913743.945 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-25T22:15:43.948Z,1537913743.948 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-25T22:15:43.952Z,1537913743.952 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-25T22:15:43.964Z,1537913743.964 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-25T22:15:43.967Z,1537913743.967 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-25T22:15:43.979Z,1537913743.979 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-25T22:15:43.986Z,1537913743.986 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-25T22:15:43.990Z,1537913743.990 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-25T22:15:44.004Z,1537913744.004 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-25T22:15:44.007Z,1537913744.007 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-25T22:15:44.010Z,1537913744.010 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-25T22:15:44.025Z,1537913744.025 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-25T22:15:44.028Z,1537913744.028 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-25T22:15:44.032Z,1537913744.032 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-25T22:15:44.036Z,1537913744.036 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-25T22:15:44.071Z,1537913744.071 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-25T22:15:44.135Z,1537913744.135 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-25T22:15:44.200Z,1537913744.200 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:15:44.228Z,1537913744.228 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-25T22:15:44.262Z,1537913744.262 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:15:44.293Z,1537913744.293 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:15:44.303Z,1537913744.303 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:15:44.337Z,1537913744.337 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-25T22:15:44.339Z,1537913744.339 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-25T22:15:44.341Z,1537913744.341 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-25T22:15:44.343Z,1537913744.343 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-25T22:15:44.366Z,1537913744.366 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-25T22:15:44.368Z,1537913744.368 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-25T22:15:44.370Z,1537913744.370 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-25T22:15:44.371Z,1537913744.371 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-25T22:15:44.374Z,1537913744.374 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-25T22:15:44.429Z,1537913744.429 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-25T22:15:44.517Z,1537913744.517 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-25T22:15:44.579Z,1537913744.579 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-25T22:15:44.607Z,1537913744.607 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-25T22:15:44.648Z,1537913744.648 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-25T22:15:44.687Z,1537913744.687 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-25T22:15:44.821Z,1537913744.821 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>0</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>    

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-25T22:15:44.822Z,1537913744.822 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-25T22:15:51.295Z,1537913751.295 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:15:51.295Z,1537913751.295 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 1
2018-09-25T22:15:51.295Z,1537913751.295 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:15:51.309Z,1537913751.309 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:15:51.309Z,1537913751.309 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-09-25T22:15:51.309Z,1537913751.309 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:15:51.335Z,1537913751.335 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:15:51.335Z,1537913751.335 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:15:51.723Z,1537913751.723 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:15:51.723Z,1537913751.723 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 1
2018-09-25T22:15:51.724Z,1537913751.724 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:15:51.724Z,1537913751.724 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-09-25T22:15:52.103Z,1537913752.103 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:15:52.103Z,1537913752.103 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:15:52.104Z,1537913752.104 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:15:52.104Z,1537913752.104 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:15:52.109Z,1537913752.109 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:15:52.109Z,1537913752.109 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:15:55.893Z,1537913755.893 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T22:15:56.734Z,1537913756.734 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004140
2018-09-25T22:16:00.946Z,1537913760.946 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180925T215133/Courier0007.lzma
2018-09-25T22:16:01.720Z,1537913761.720 [DataOverHttps](INFO): Moved sent file to Logs/20180925T215133/Courier0007.lzma.bak
2018-09-25T22:16:01.720Z,1537913761.720 [DataOverHttps](INFO): SBD MOMSN=8588910
2018-09-25T22:16:06.349Z,1537913766.349 [Startup:StartupSatComms:B](INFO): Timed out from 2018-09-25T22:15:06.1Z
2018-09-25T22:16:06.349Z,1537913766.349 [Startup:StartupSatComms:B] Stopped
2018-09-25T22:16:06.349Z,1537913766.349 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-09-25T22:16:06.349Z,1537913766.349 [Startup:StartupSatComms] Stopped
2018-09-25T22:16:06.350Z,1537913766.350 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-09-25T22:16:06.351Z,1537913766.351 [Startup](INFO): Completed Startup
2018-09-25T22:16:06.351Z,1537913766.351 [MissionManager](INFO): Startup is completed.
2018-09-25T22:16:06.351Z,1537913766.351 [MissionManager](INFO): Uninitializing Mission Startup
2018-09-25T22:16:06.351Z,1537913766.351 [Startup] Stopped
2018-09-25T22:16:06.351Z,1537913766.351 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-09-25T22:16:06.351Z,1537913766.351 [Startup:A.GoToSurface] Stopped
2018-09-25T22:16:06.351Z,1537913766.351 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T22:16:06.764Z,1537913766.764 [MissionManager](IMPORTANT): Started mission Default
2018-09-25T22:16:06.764Z,1537913766.764 [Default] Running Loop=1
2018-09-25T22:16:06.764Z,1537913766.764 [Default](DEBUG): Aggregate::initialize Default
2018-09-25T22:16:06.764Z,1537913766.764 [Default:B.GoToSurface] Running Loop=1
2018-09-25T22:16:06.764Z,1537913766.764 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T22:16:06.765Z,1537913766.765 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T22:16:06.765Z,1537913766.765 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T22:16:06.765Z,1537913766.765 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T22:16:06.766Z,1537913766.766 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T22:16:06.766Z,1537913766.766 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T22:16:06.766Z,1537913766.766 [Default:A.Wait] Running Loop=1
2018-09-25T22:16:06.767Z,1537913766.767 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-25T22:16:10.895Z,1537913770.895 [DataOverHttps](INFO): Sending 1633 bytes from file Logs/20180925T215133/Express0008.lzma
2018-09-25T22:16:11.684Z,1537913771.684 [DataOverHttps](INFO): Moved sent file to Logs/20180925T215133/Express0008.lzma.bak
2018-09-25T22:16:11.684Z,1537913771.684 [DataOverHttps](INFO): SBD MOMSN=8588912
2018-09-25T22:16:20.161Z,1537913780.161 [Default:A.Wait](INFO): Done Waiting.
2018-09-25T22:16:20.161Z,1537913780.161 [Default:A.Wait] Stopped
2018-09-25T22:16:20.161Z,1537913780.161 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-25T22:16:20.536Z,1537913780.536 [Default:CheckIn] Running Loop=1
2018-09-25T22:16:20.536Z,1537913780.536 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-25T22:16:20.536Z,1537913780.536 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-25T22:16:20.983Z,1537913780.983 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-25T22:17:45.924Z,1537913865.924 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T22:18:33.111Z,1537913913.111 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-09-25T22:18:52.368Z,1537913932.368 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:18:52.368Z,1537913932.368 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 2
2018-09-25T22:18:52.368Z,1537913932.368 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:18:52.370Z,1537913932.370 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:18:52.370Z,1537913932.370 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 2
2018-09-25T22:18:52.370Z,1537913932.370 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:18:52.384Z,1537913932.384 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:18:52.384Z,1537913932.384 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:18:52.771Z,1537913932.771 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:18:52.771Z,1537913932.771 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 2
2018-09-25T22:18:52.771Z,1537913932.771 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:18:52.771Z,1537913932.771 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 2
2018-09-25T22:18:53.160Z,1537913933.160 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:18:53.165Z,1537913933.165 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:18:53.165Z,1537913933.165 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:18:53.166Z,1537913933.166 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:18:53.166Z,1537913933.166 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:18:53.167Z,1537913933.167 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:20:08.534Z,1537914008.534 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2018-09-25T22:20:08.534Z,1537914008.534 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-25T22:20:08.619Z,1537914008.619 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-09-25T22:20:09.040Z,1537914009.040 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-25T22:20:09.047Z,1537914009.047 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-25T22:20:09.055Z,1537914009.055 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-25T22:20:09.062Z,1537914009.062 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-25T22:20:09.065Z,1537914009.065 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2018-09-25T22:20:09.068Z,1537914009.068 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-25T22:20:09.097Z,1537914009.097 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2018-09-25T22:20:09.105Z,1537914009.105 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-25T22:20:09.114Z,1537914009.114 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-25T22:20:09.122Z,1537914009.122 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-25T22:20:09.129Z,1537914009.129 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-25T22:20:09.137Z,1537914009.137 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-25T22:20:09.140Z,1537914009.140 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2018-09-25T22:20:09.150Z,1537914009.150 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-25T22:20:09.154Z,1537914009.154 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-25T22:20:09.159Z,1537914009.159 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 1.000000 bool
2018-09-25T22:20:09.171Z,1537914009.171 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-25T22:20:09.189Z,1537914009.189 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-25T22:20:09.197Z,1537914009.197 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-25T22:20:09.234Z,1537914009.234 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-25T22:20:09.254Z,1537914009.254 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-25T22:20:09.278Z,1537914009.278 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-25T22:20:09.282Z,1537914009.282 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2018-09-25T22:20:09.309Z,1537914009.309 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2018-09-25T22:20:09.312Z,1537914009.312 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2018-09-25T22:20:09.337Z,1537914009.337 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2018-09-25T22:20:09.355Z,1537914009.355 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-25T22:20:09.358Z,1537914009.358 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-25T22:20:09.374Z,1537914009.374 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-25T22:20:09.383Z,1537914009.383 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-25T22:20:09.414Z,1537914009.414 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-25T22:20:09.417Z,1537914009.417 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-25T22:20:09.437Z,1537914009.437 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-25T22:20:09.441Z,1537914009.441 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-25T22:20:09.477Z,1537914009.477 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-25T22:20:09.480Z,1537914009.480 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-25T22:20:09.484Z,1537914009.484 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-25T22:20:09.509Z,1537914009.509 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-25T22:20:09.533Z,1537914009.533 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-25T22:20:09.545Z,1537914009.545 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-25T22:20:09.549Z,1537914009.549 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-25T22:20:09.564Z,1537914009.564 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-25T22:20:09.591Z,1537914009.591 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-25T22:20:09.595Z,1537914009.595 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-25T22:20:09.607Z,1537914009.607 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2018-09-25T22:20:09.611Z,1537914009.611 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2018-09-25T22:20:09.643Z,1537914009.643 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2018-09-25T22:20:09.659Z,1537914009.659 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2018-09-25T22:20:09.689Z,1537914009.689 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2018-09-25T22:20:09.772Z,1537914009.772 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:20:09.819Z,1537914009.819 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-25T22:20:09.861Z,1537914009.861 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:20:09.906Z,1537914009.906 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:20:09.934Z,1537914009.934 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:20:10.047Z,1537914010.047 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2018-09-25T22:20:10.069Z,1537914010.069 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2018-09-25T22:20:13.248Z,1537914013.248 [Default] Stopped
2018-09-25T22:20:13.248Z,1537914013.248 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-25T22:20:13.248Z,1537914013.248 [Default:B.GoToSurface] Stopped
2018-09-25T22:20:13.248Z,1537914013.248 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T22:20:13.248Z,1537914013.248 [Default:CheckIn] Stopped
2018-09-25T22:20:13.249Z,1537914013.249 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-25T22:20:13.249Z,1537914013.249 [Default:CheckIn:Read_GPS] Stopped
2018-09-25T22:20:13.249Z,1537914013.249 [MissionManager](IMPORTANT): Started mission Science
2018-09-25T22:20:13.249Z,1537914013.249 [Science] Running Loop=1
2018-09-25T22:20:13.249Z,1537914013.249 [Science](DEBUG): Aggregate::initialize Science
2018-09-25T22:20:13.249Z,1537914013.249 [Science:A] Running Loop=1
2018-09-25T22:20:13.249Z,1537914013.249 [Science:B] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:C] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:D] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:E] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:F] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:G] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:Read_Oil] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:PeakDetectChl] Running Loop=1
2018-09-25T22:20:13.250Z,1537914013.250 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-25T22:20:13.250Z,1537914013.250 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:20:13.251Z,1537914013.251 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:20:13.252Z,1537914013.252 [Science:HighestChlPeakReport] Running Loop=1
2018-09-25T22:20:13.253Z,1537914013.253 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-25T22:20:13.253Z,1537914013.253 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-25T22:20:13.253Z,1537914013.253 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-25T22:20:13.253Z,1537914013.253 [Science:PeakDetectNO3] Running Loop=1
2018-09-25T22:20:13.254Z,1537914013.254 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-25T22:20:13.254Z,1537914013.254 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:20:13.254Z,1537914013.254 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:20:13.256Z,1537914013.256 [Science:PeakDetectOil] Running Loop=1
2018-09-25T22:20:13.256Z,1537914013.256 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-25T22:20:13.256Z,1537914013.256 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:20:13.257Z,1537914013.257 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:20:13.260Z,1537914013.260 [Science:PeakDetectFDOM] Running Loop=1
2018-09-25T22:20:13.261Z,1537914013.261 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2018-09-25T22:20:13.262Z,1537914013.262 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:20:13.262Z,1537914013.262 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectFDOM] Stopped
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectOil] Stopped
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-25T22:20:13.282Z,1537914013.282 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectNO3] Stopped
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:20:13.283Z,1537914013.283 [Science:HighestChlPeakReport] Stopped
2018-09-25T22:20:13.283Z,1537914013.283 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-25T22:20:13.283Z,1537914013.283 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-25T22:20:13.283Z,1537914013.283 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-25T22:20:13.283Z,1537914013.283 [Science:PeakDetectChl] Stopped
2018-09-25T22:20:13.284Z,1537914013.284 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-25T22:20:13.284Z,1537914013.284 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-25T22:20:13.284Z,1537914013.284 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:20:13.284Z,1537914013.284 [Science:Read_Oil] Running Loop=1
2018-09-25T22:20:13.289Z,1537914013.289 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-25T22:20:13.291Z,1537914013.291 [Science:G] Stopped
2018-09-25T22:20:13.291Z,1537914013.291 [Science:F] Stopped
2018-09-25T22:20:13.291Z,1537914013.291 [Science:E] Stopped
2018-09-25T22:20:13.291Z,1537914013.291 [Science:D] Stopped
2018-09-25T22:20:13.291Z,1537914013.291 [Science:C] Running Loop=1
2018-09-25T22:20:13.292Z,1537914013.292 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-25T22:20:13.292Z,1537914013.292 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-25T22:20:13.298Z,1537914013.298 [Science:B] Stopped
2018-09-25T22:20:13.298Z,1537914013.298 [Science:A] Running Loop=1
2018-09-25T22:20:13.299Z,1537914013.299 [Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-25T22:20:13.553Z,1537914013.553 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:20:13.553Z,1537914013.553 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:20:13.557Z,1537914013.557 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2018-09-25T22:20:13.565Z,1537914013.565 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:20:13.977Z,1537914013.977 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:14.381Z,1537914014.381 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:14.793Z,1537914014.793 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:14.963Z,1537914014.963 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041100 psu
2018-09-25T22:20:15.037Z,1537914015.037 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:15.161Z,1537914015.161 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042900 psu
2018-09-25T22:20:15.164Z,1537914015.164 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:15.358Z,1537914015.358 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042500 psu
2018-09-25T22:20:15.361Z,1537914015.361 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:15.425Z,1537914015.425 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:15.570Z,1537914015.570 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041900 psu
2018-09-25T22:20:15.590Z,1537914015.590 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:15.765Z,1537914015.765 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043100 psu
2018-09-25T22:20:15.768Z,1537914015.768 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:15.973Z,1537914015.973 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044100 psu
2018-09-25T22:20:15.976Z,1537914015.976 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:16.183Z,1537914016.183 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041100 psu
2018-09-25T22:20:16.202Z,1537914016.202 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:16.374Z,1537914016.374 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042700 psu
2018-09-25T22:20:16.377Z,1537914016.377 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:16.449Z,1537914016.449 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:16.582Z,1537914016.582 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042200 psu
2018-09-25T22:20:16.585Z,1537914016.585 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:16.789Z,1537914016.789 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041400 psu
2018-09-25T22:20:16.792Z,1537914016.792 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:16.989Z,1537914016.989 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:16.992Z,1537914016.992 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:17.197Z,1537914017.197 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:17.200Z,1537914017.200 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:17.391Z,1537914017.391 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:17.394Z,1537914017.394 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:17.593Z,1537914017.593 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043200 psu
2018-09-25T22:20:17.596Z,1537914017.596 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:17.801Z,1537914017.801 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043900 psu
2018-09-25T22:20:17.804Z,1537914017.804 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:18.009Z,1537914018.009 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:18.012Z,1537914018.012 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:18.206Z,1537914018.206 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:18.208Z,1537914018.208 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:18.406Z,1537914018.406 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042700 psu
2018-09-25T22:20:18.408Z,1537914018.408 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:18.613Z,1537914018.613 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042100 psu
2018-09-25T22:20:18.616Z,1537914018.616 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:18.821Z,1537914018.821 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043500 psu
2018-09-25T22:20:18.824Z,1537914018.824 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:19.018Z,1537914019.018 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043300 psu
2018-09-25T22:20:19.020Z,1537914019.020 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:19.225Z,1537914019.225 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043100 psu
2018-09-25T22:20:19.228Z,1537914019.228 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:19.426Z,1537914019.426 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043600 psu
2018-09-25T22:20:19.428Z,1537914019.428 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:19.633Z,1537914019.633 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044600 psu
2018-09-25T22:20:19.636Z,1537914019.636 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:19.834Z,1537914019.834 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:19.838Z,1537914019.838 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.033Z,1537914020.033 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044300 psu
2018-09-25T22:20:20.036Z,1537914020.036 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.241Z,1537914020.241 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043900 psu
2018-09-25T22:20:20.244Z,1537914020.244 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.437Z,1537914020.437 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:20.440Z,1537914020.440 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.649Z,1537914020.649 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:20.652Z,1537914020.652 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.846Z,1537914020.846 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041600 psu
2018-09-25T22:20:20.860Z,1537914020.860 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:20.951Z,1537914020.951 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		255.036		96.282		23.575		28.676		29.904		39.163		9.259		704.8		888.2		54.0	



2018-09-25T22:20:20.951Z,1537914020.951 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:20:21.040Z,1537914021.040 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-25T22:20:21.050Z,1537914021.050 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045100 psu
2018-09-25T22:20:21.052Z,1537914021.052 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:21.257Z,1537914021.257 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044300 psu
2018-09-25T22:20:21.260Z,1537914021.260 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:21.454Z,1537914021.454 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044300 psu
2018-09-25T22:20:21.456Z,1537914021.456 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:21.665Z,1537914021.665 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043100 psu
2018-09-25T22:20:21.668Z,1537914021.668 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:21.870Z,1537914021.870 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042700 psu
2018-09-25T22:20:21.879Z,1537914021.879 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.066Z,1537914022.066 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045000 psu
2018-09-25T22:20:22.070Z,1537914022.070 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.144Z,1537914022.144 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		255.197		96.344		23.576		28.669		29.897		39.153		9.257		704.8		887.4		54.0	



2018-09-25T22:20:22.144Z,1537914022.144 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:20:22.266Z,1537914022.266 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042400 psu
2018-09-25T22:20:22.268Z,1537914022.268 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.474Z,1537914022.474 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041800 psu
2018-09-25T22:20:22.478Z,1537914022.478 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.674Z,1537914022.674 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045900 psu
2018-09-25T22:20:22.678Z,1537914022.678 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.876Z,1537914022.876 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041800 psu
2018-09-25T22:20:22.882Z,1537914022.882 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:22.945Z,1537914022.945 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		255.040		96.285		23.576		28.675		29.903		39.160		9.257		704.9		886.7		53.9	

2018-09-25T22:20:22.946Z,1537914022.946 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:20:23.078Z,1537914023.078 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.040600 psu
2018-09-25T22:20:23.081Z,1537914023.081 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:23.291Z,1537914023.291 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:23.294Z,1537914023.294 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:23.485Z,1537914023.485 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:23.488Z,1537914023.488 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:23.693Z,1537914023.693 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044600 psu
2018-09-25T22:20:23.696Z,1537914023.696 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:23.890Z,1537914023.890 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:23.892Z,1537914023.892 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:23.965Z,1537914023.965 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:24.101Z,1537914024.101 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043100 psu
2018-09-25T22:20:24.104Z,1537914024.104 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:24.305Z,1537914024.305 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.046700 psu
2018-09-25T22:20:24.308Z,1537914024.308 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:24.509Z,1537914024.509 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043200 psu
2018-09-25T22:20:24.512Z,1537914024.512 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:24.707Z,1537914024.707 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045200 psu
2018-09-25T22:20:24.715Z,1537914024.715 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:24.909Z,1537914024.909 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045100 psu
2018-09-25T22:20:24.912Z,1537914024.912 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:25.114Z,1537914025.114 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044100 psu
2018-09-25T22:20:25.117Z,1537914025.117 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:25.313Z,1537914025.313 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:25.316Z,1537914025.316 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:25.343Z,1537914025.343 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		255.085		96.300		23.575		28.674		29.902		39.157		9.255		704.8		885.5		54.0	

2018-09-25T22:20:25.343Z,1537914025.343 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:20:25.517Z,1537914025.517 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044800 psu
2018-09-25T22:20:25.520Z,1537914025.520 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:25.721Z,1537914025.721 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:25.724Z,1537914025.724 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:25.921Z,1537914025.921 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:25.924Z,1537914025.924 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:26.129Z,1537914026.129 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044700 psu
2018-09-25T22:20:26.132Z,1537914026.132 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:26.337Z,1537914026.337 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043300 psu
2018-09-25T22:20:26.340Z,1537914026.340 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:26.533Z,1537914026.533 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044200 psu
2018-09-25T22:20:26.536Z,1537914026.536 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:26.734Z,1537914026.734 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:26.736Z,1537914026.736 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:26.953Z,1537914026.953 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042000 psu
2018-09-25T22:20:26.956Z,1537914026.956 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:27.149Z,1537914027.149 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043500 psu
2018-09-25T22:20:27.152Z,1537914027.152 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:27.353Z,1537914027.353 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042000 psu
2018-09-25T22:20:27.356Z,1537914027.356 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:27.553Z,1537914027.553 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044200 psu
2018-09-25T22:20:27.556Z,1537914027.556 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:27.754Z,1537914027.754 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042400 psu
2018-09-25T22:20:27.756Z,1537914027.756 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:27.953Z,1537914027.953 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:27.956Z,1537914027.956 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:28.158Z,1537914028.158 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:28.161Z,1537914028.161 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:28.365Z,1537914028.365 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:28.368Z,1537914028.368 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:28.566Z,1537914028.566 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042500 psu
2018-09-25T22:20:28.568Z,1537914028.568 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:28.765Z,1537914028.765 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:28.768Z,1537914028.768 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:28.978Z,1537914028.978 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045200 psu
2018-09-25T22:20:28.981Z,1537914028.981 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:29.177Z,1537914029.177 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045400 psu
2018-09-25T22:20:29.180Z,1537914029.180 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:29.378Z,1537914029.378 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:29.380Z,1537914029.380 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:29.578Z,1537914029.578 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044800 psu
2018-09-25T22:20:29.580Z,1537914029.580 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:29.781Z,1537914029.781 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:29.819Z,1537914029.819 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:29.993Z,1537914029.993 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042100 psu
2018-09-25T22:20:29.996Z,1537914029.996 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:30.194Z,1537914030.194 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045000 psu
2018-09-25T22:20:30.197Z,1537914030.197 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:30.395Z,1537914030.395 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:30.399Z,1537914030.399 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:30.601Z,1537914030.601 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044100 psu
2018-09-25T22:20:30.604Z,1537914030.604 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:30.801Z,1537914030.801 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:30.804Z,1537914030.804 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:31.002Z,1537914031.002 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:31.004Z,1537914031.004 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:31.202Z,1537914031.202 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:31.205Z,1537914031.205 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:31.269Z,1537914031.269 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:31.410Z,1537914031.410 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:31.412Z,1537914031.412 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:31.609Z,1537914031.609 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.047600 psu
2018-09-25T22:20:31.612Z,1537914031.612 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:31.817Z,1537914031.817 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043500 psu
2018-09-25T22:20:31.820Z,1537914031.820 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:32.017Z,1537914032.017 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043100 psu
2018-09-25T22:20:32.020Z,1537914032.020 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:32.222Z,1537914032.222 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:32.224Z,1537914032.224 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:32.429Z,1537914032.429 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043600 psu
2018-09-25T22:20:32.432Z,1537914032.432 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:32.629Z,1537914032.629 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:32.632Z,1537914032.632 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:32.830Z,1537914032.830 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043600 psu
2018-09-25T22:20:32.832Z,1537914032.832 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:33.031Z,1537914033.031 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044700 psu
2018-09-25T22:20:33.043Z,1537914033.043 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:33.234Z,1537914033.234 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043000 psu
2018-09-25T22:20:33.236Z,1537914033.236 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:33.438Z,1537914033.438 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:33.442Z,1537914033.442 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:33.649Z,1537914033.649 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043700 psu
2018-09-25T22:20:33.652Z,1537914033.652 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:33.849Z,1537914033.849 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043900 psu
2018-09-25T22:20:33.852Z,1537914033.852 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:34.047Z,1537914034.047 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045300 psu
2018-09-25T22:20:34.055Z,1537914034.055 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:34.250Z,1537914034.250 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.037000 psu
2018-09-25T22:20:34.253Z,1537914034.253 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:34.457Z,1537914034.457 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043500 psu
2018-09-25T22:20:34.460Z,1537914034.460 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:34.666Z,1537914034.666 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043700 psu
2018-09-25T22:20:34.669Z,1537914034.669 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:34.865Z,1537914034.865 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:34.868Z,1537914034.868 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.069Z,1537914035.069 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041100 psu
2018-09-25T22:20:35.072Z,1537914035.072 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.266Z,1537914035.266 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:35.268Z,1537914035.268 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.473Z,1537914035.473 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044600 psu
2018-09-25T22:20:35.476Z,1537914035.476 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.679Z,1537914035.679 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:35.688Z,1537914035.688 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.874Z,1537914035.874 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:35.877Z,1537914035.877 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:35.949Z,1537914035.949 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:36.081Z,1537914036.081 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041100 psu
2018-09-25T22:20:36.084Z,1537914036.084 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:36.289Z,1537914036.289 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044200 psu
2018-09-25T22:20:36.292Z,1537914036.292 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:36.485Z,1537914036.485 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044300 psu
2018-09-25T22:20:36.488Z,1537914036.488 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:36.687Z,1537914036.687 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043700 psu
2018-09-25T22:20:36.717Z,1537914036.717 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:36.891Z,1537914036.891 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:36.894Z,1537914036.894 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:37.101Z,1537914037.101 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.047400 psu
2018-09-25T22:20:37.104Z,1537914037.104 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:37.305Z,1537914037.305 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:37.308Z,1537914037.308 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:37.501Z,1537914037.501 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044000 psu
2018-09-25T22:20:37.504Z,1537914037.504 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:37.710Z,1537914037.710 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042700 psu
2018-09-25T22:20:37.715Z,1537914037.715 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:37.906Z,1537914037.906 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:37.909Z,1537914037.909 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:38.113Z,1537914038.113 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:38.116Z,1537914038.116 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:38.317Z,1537914038.317 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:38.320Z,1537914038.320 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:38.525Z,1537914038.525 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041400 psu
2018-09-25T22:20:38.529Z,1537914038.529 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:38.718Z,1537914038.718 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041900 psu
2018-09-25T22:20:38.720Z,1537914038.720 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:38.793Z,1537914038.793 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:38.925Z,1537914038.925 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:38.928Z,1537914038.928 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:39.125Z,1537914039.125 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044600 psu
2018-09-25T22:20:39.128Z,1537914039.128 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:39.337Z,1537914039.337 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043400 psu
2018-09-25T22:20:39.340Z,1537914039.340 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:39.533Z,1537914039.533 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042000 psu
2018-09-25T22:20:39.536Z,1537914039.536 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:39.736Z,1537914039.736 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:39.790Z,1537914039.790 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:39.938Z,1537914039.938 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043900 psu
2018-09-25T22:20:39.942Z,1537914039.942 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:40.153Z,1537914040.153 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.046200 psu
2018-09-25T22:20:40.156Z,1537914040.156 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:40.353Z,1537914040.353 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:40.356Z,1537914040.356 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:40.550Z,1537914040.550 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044400 psu
2018-09-25T22:20:40.553Z,1537914040.553 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:40.755Z,1537914040.755 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045300 psu
2018-09-25T22:20:40.763Z,1537914040.763 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:40.956Z,1537914040.956 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.046100 psu
2018-09-25T22:20:40.964Z,1537914040.964 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:41.161Z,1537914041.161 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:41.164Z,1537914041.164 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:41.365Z,1537914041.365 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:41.368Z,1537914041.368 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:41.565Z,1537914041.565 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042400 psu
2018-09-25T22:20:41.568Z,1537914041.568 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:41.773Z,1537914041.773 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043900 psu
2018-09-25T22:20:41.776Z,1537914041.776 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:41.978Z,1537914041.978 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:41.980Z,1537914041.980 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:42.178Z,1537914042.178 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:42.183Z,1537914042.183 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:42.382Z,1537914042.382 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045000 psu
2018-09-25T22:20:42.384Z,1537914042.384 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:42.581Z,1537914042.581 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043800 psu
2018-09-25T22:20:42.584Z,1537914042.584 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:42.783Z,1537914042.783 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.041900 psu
2018-09-25T22:20:42.787Z,1537914042.787 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:42.986Z,1537914042.986 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042800 psu
2018-09-25T22:20:42.993Z,1537914042.993 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:43.186Z,1537914043.186 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045200 psu
2018-09-25T22:20:43.189Z,1537914043.189 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:43.261Z,1537914043.261 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:43.393Z,1537914043.393 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.040300 psu
2018-09-25T22:20:43.396Z,1537914043.396 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:43.594Z,1537914043.594 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042900 psu
2018-09-25T22:20:43.596Z,1537914043.596 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:43.798Z,1537914043.798 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043500 psu
2018-09-25T22:20:43.801Z,1537914043.801 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:44.005Z,1537914044.005 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044200 psu
2018-09-25T22:20:44.008Z,1537914044.008 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:44.206Z,1537914044.206 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.043700 psu
2018-09-25T22:20:44.209Z,1537914044.209 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:44.413Z,1537914044.413 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044800 psu
2018-09-25T22:20:44.416Z,1537914044.416 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:44.608Z,1537914044.608 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.044500 psu
2018-09-25T22:20:44.611Z,1537914044.611 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:44.813Z,1537914044.813 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.045600 psu
2018-09-25T22:20:44.816Z,1537914044.816 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:45.014Z,1537914045.014 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042700 psu
2018-09-25T22:20:45.018Z,1537914045.018 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:45.051Z,1537914045.051 [CommandLine](IMPORTANT): got command stop
2018-09-25T22:20:45.051Z,1537914045.051 [CommandLine](IMPORTANT): Scheduling is paused
2018-09-25T22:20:45.051Z,1537914045.051 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-25T22:20:45.088Z,1537914045.088 [MissionManager](INFO): MissionManager is completed.
2018-09-25T22:20:45.088Z,1537914045.088 [MissionManager](INFO): Uninitializing Mission Science
2018-09-25T22:20:45.088Z,1537914045.088 [Science] Stopped
2018-09-25T22:20:45.101Z,1537914045.101 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:20:45.102Z,1537914045.102 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-25T22:20:45.102Z,1537914045.102 [Science:A] Stopped
2018-09-25T22:20:45.102Z,1537914045.102 [Science:C] Stopped
2018-09-25T22:20:45.102Z,1537914045.102 [Science:Read_Oil] Stopped
2018-09-25T22:20:45.222Z,1537914045.222 [CTD_NeilBrown](ERROR): Salinity reading out of range: -0.042600 psu
2018-09-25T22:20:45.226Z,1537914045.226 [CTD_NeilBrown](INFO): some bad data, not updating bins
2018-09-25T22:20:45.257Z,1537914045.257 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:20:45.406Z,1537914045.406 [MissionManager](IMPORTANT): Started mission Default
2018-09-25T22:20:45.406Z,1537914045.406 [Default] Running Loop=1
2018-09-25T22:20:45.407Z,1537914045.407 [Default](DEBUG): Aggregate::initialize Default
2018-09-25T22:20:45.407Z,1537914045.407 [Default:B.GoToSurface] Running Loop=1
2018-09-25T22:20:45.407Z,1537914045.407 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T22:20:45.407Z,1537914045.407 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T22:20:45.408Z,1537914045.408 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T22:20:45.408Z,1537914045.408 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T22:20:45.408Z,1537914045.408 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T22:20:45.409Z,1537914045.409 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T22:20:45.410Z,1537914045.410 [Default:A.Wait] Running Loop=1
2018-09-25T22:20:45.410Z,1537914045.410 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-25T22:20:45.861Z,1537914045.861 [Aanderaa_O2](INFO): Powering down
2018-09-25T22:20:48.097Z,1537914048.097 [CommandLine](IMPORTANT): got command show variable maxSal
2018-09-25T22:20:48.118Z,1537914048.118 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound (practical_salinity_unit)
2018-09-25T22:20:48.119Z,1537914048.119 [CommandLine](IMPORTANT): CTD_Seabird.maxSalinityBound (practical_salinity_unit)
2018-09-25T22:20:55.700Z,1537914055.700 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.maxSalinityBound
2018-09-25T22:20:55.720Z,1537914055.720 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound 37.999999 psu
2018-09-25T22:20:58.623Z,1537914058.623 [Default:A.Wait](INFO): Done Waiting.
2018-09-25T22:20:58.624Z,1537914058.624 [Default:A.Wait] Stopped
2018-09-25T22:20:58.624Z,1537914058.624 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-25T22:20:59.030Z,1537914059.030 [Default:CheckIn] Running Loop=1
2018-09-25T22:20:59.030Z,1537914059.030 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-25T22:20:59.030Z,1537914059.030 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-25T22:21:17.093Z,1537914077.093 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-25T22:21:52.383Z,1537914112.383 [CommandLine](IMPORTANT): got command show variable salinintymin
2018-09-25T22:21:53.481Z,1537914113.481 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:21:53.481Z,1537914113.481 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 3
2018-09-25T22:21:53.482Z,1537914113.482 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:21:53.483Z,1537914113.483 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:21:53.483Z,1537914113.483 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 3
2018-09-25T22:21:53.484Z,1537914113.484 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:21:53.509Z,1537914113.509 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:21:53.510Z,1537914113.510 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:21:53.892Z,1537914113.892 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:21:53.892Z,1537914113.892 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 3
2018-09-25T22:21:53.892Z,1537914113.892 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:21:53.893Z,1537914113.893 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 3
2018-09-25T22:21:54.298Z,1537914114.298 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:21:54.298Z,1537914114.298 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:21:54.298Z,1537914114.298 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:21:54.299Z,1537914114.299 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:21:54.299Z,1537914114.299 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:21:54.300Z,1537914114.300 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:21:56.527Z,1537914116.527 [CommandLine](IMPORTANT): got command show variable minsal
2018-09-25T22:21:56.555Z,1537914116.555 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound (practical_salinity_unit)
2018-09-25T22:21:56.556Z,1537914116.556 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound (practical_salinity_unit)
2018-09-25T22:22:02.801Z,1537914122.801 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.minSalinityBound 
2018-09-25T22:22:02.802Z,1537914122.802 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound 28.000001 psu
2018-09-25T22:22:13.182Z,1537914133.182 [CommandLine](IMPORTANT): got command configSet list
2018-09-25T22:22:13.182Z,1537914133.182 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-25T22:22:13.184Z,1537914133.184 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour;

2018-09-25T22:22:13.184Z,1537914133.184 [CommandLine](IMPORTANT): CBIT.gf24Offset=-28 microampere;

2018-09-25T22:22:13.184Z,1537914133.184 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=0 bool;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound=-10 practical_salinity_unit;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): CTD_Seabird.simulateHardware=1 bool;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter;

2018-09-25T22:22:13.205Z,1537914133.205 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-09-25T22:22:13.206Z,1537914133.206 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt;

2018-09-25T22:22:13.206Z,1537914133.206 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool;

2018-09-25T22:22:13.206Z,1537914133.206 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter;

2018-09-25T22:22:13.206Z,1537914133.206 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter;

2018-09-25T22:22:24.791Z,1537914144.791 [CommandLine](IMPORTANT): got command show variable maxSal
2018-09-25T22:22:24.845Z,1537914144.845 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound (practical_salinity_unit)
2018-09-25T22:22:24.846Z,1537914144.846 [CommandLine](IMPORTANT): CTD_Seabird.maxSalinityBound (practical_salinity_unit)
2018-09-25T22:22:31.918Z,1537914151.918 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.maxSalinityBound
2018-09-25T22:22:31.918Z,1537914151.918 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound 37.999999 psu
2018-09-25T22:22:44.883Z,1537914164.883 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.minSalinityBound 
2018-09-25T22:22:44.883Z,1537914164.883 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound 28.000001 psu
2018-09-25T22:22:57.730Z,1537914177.730 [CommandLine](IMPORTANT): got command configSet CTD_NeilBrown.minSalinityBound -10.000000 practical_salinity_unit persist
2018-09-25T22:23:01.755Z,1537914181.755 [CommandLine](IMPORTANT): got command configSet list
2018-09-25T22:23:01.755Z,1537914181.755 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CBIT.gf24Offset=-28 microampere;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound=-10 practical_salinity_unit;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=0 bool;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-09-25T22:23:01.756Z,1537914181.756 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound=-10 practical_salinity_unit;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): CTD_Seabird.simulateHardware=1 bool;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt;

2018-09-25T22:23:01.757Z,1537914181.757 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool;

2018-09-25T22:23:01.758Z,1537914181.758 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter;

2018-09-25T22:23:01.758Z,1537914181.758 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter;

2018-09-25T22:23:16.091Z,1537914196.091 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.minSalinityBound 
2018-09-25T22:23:16.091Z,1537914196.091 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound -10.000000 psu
2018-09-25T22:23:20.162Z,1537914200.162 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2018-09-25T22:23:20.163Z,1537914200.163 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-09-25T22:23:20.389Z,1537914200.389 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-25T22:23:20.392Z,1537914200.392 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-25T22:23:20.395Z,1537914200.395 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-25T22:23:20.397Z,1537914200.397 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-25T22:23:20.400Z,1537914200.400 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2018-09-25T22:23:20.402Z,1537914200.402 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-25T22:23:20.404Z,1537914200.404 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2018-09-25T22:23:20.406Z,1537914200.406 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-25T22:23:20.409Z,1537914200.409 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-25T22:23:20.411Z,1537914200.411 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-25T22:23:20.413Z,1537914200.413 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-25T22:23:20.415Z,1537914200.415 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-25T22:23:20.418Z,1537914200.418 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2018-09-25T22:23:20.420Z,1537914200.420 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-25T22:23:20.423Z,1537914200.423 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-25T22:23:20.425Z,1537914200.425 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 1.000000 bool
2018-09-25T22:23:20.428Z,1537914200.428 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-25T22:23:20.431Z,1537914200.431 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-25T22:23:20.455Z,1537914200.455 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-25T22:23:20.494Z,1537914200.494 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-25T22:23:20.498Z,1537914200.498 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-25T22:23:20.551Z,1537914200.551 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-25T22:23:20.553Z,1537914200.553 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2018-09-25T22:23:20.556Z,1537914200.556 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2018-09-25T22:23:20.568Z,1537914200.568 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2018-09-25T22:23:20.571Z,1537914200.571 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2018-09-25T22:23:20.588Z,1537914200.588 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-25T22:23:20.590Z,1537914200.590 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-25T22:23:20.593Z,1537914200.593 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-25T22:23:20.595Z,1537914200.595 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-25T22:23:20.610Z,1537914200.610 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-25T22:23:20.612Z,1537914200.612 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-25T22:23:20.615Z,1537914200.615 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-25T22:23:20.617Z,1537914200.617 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-25T22:23:20.620Z,1537914200.620 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-25T22:23:20.639Z,1537914200.639 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-25T22:23:20.641Z,1537914200.641 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-25T22:23:20.643Z,1537914200.643 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-25T22:23:20.670Z,1537914200.670 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-25T22:23:20.673Z,1537914200.673 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-25T22:23:20.675Z,1537914200.675 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-25T22:23:20.693Z,1537914200.693 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-25T22:23:20.695Z,1537914200.695 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-25T22:23:20.698Z,1537914200.698 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-25T22:23:20.700Z,1537914200.700 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2018-09-25T22:23:20.725Z,1537914200.725 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2018-09-25T22:23:20.727Z,1537914200.727 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2018-09-25T22:23:20.730Z,1537914200.730 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2018-09-25T22:23:20.732Z,1537914200.732 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2018-09-25T22:23:20.794Z,1537914200.794 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:23:20.806Z,1537914200.806 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-25T22:23:20.829Z,1537914200.829 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:23:20.855Z,1537914200.855 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:23:20.867Z,1537914200.867 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-25T22:23:21.034Z,1537914201.034 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2018-09-25T22:23:21.036Z,1537914201.036 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2018-09-25T22:23:21.342Z,1537914201.342 [Default] Stopped
2018-09-25T22:23:21.343Z,1537914201.343 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-25T22:23:21.343Z,1537914201.343 [Default:B.GoToSurface] Stopped
2018-09-25T22:23:21.343Z,1537914201.343 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T22:23:21.343Z,1537914201.343 [Default:CheckIn] Stopped
2018-09-25T22:23:21.343Z,1537914201.343 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-25T22:23:21.343Z,1537914201.343 [Default:CheckIn:Read_GPS] Stopped
2018-09-25T22:23:21.343Z,1537914201.343 [MissionManager](IMPORTANT): Started mission Science
2018-09-25T22:23:21.344Z,1537914201.344 [Science] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science](DEBUG): Aggregate::initialize Science
2018-09-25T22:23:21.344Z,1537914201.344 [Science:A] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:B] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:C] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:D] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:E] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:F] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:G] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:Read_Oil] Running Loop=1
2018-09-25T22:23:21.344Z,1537914201.344 [Science:PeakDetectChl] Running Loop=1
2018-09-25T22:23:21.345Z,1537914201.345 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-25T22:23:21.346Z,1537914201.346 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:23:21.346Z,1537914201.346 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:23:21.347Z,1537914201.347 [Science:HighestChlPeakReport] Running Loop=1
2018-09-25T22:23:21.347Z,1537914201.347 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-25T22:23:21.348Z,1537914201.348 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-25T22:23:21.348Z,1537914201.348 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-25T22:23:21.348Z,1537914201.348 [Science:PeakDetectNO3] Running Loop=1
2018-09-25T22:23:21.348Z,1537914201.348 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-25T22:23:21.348Z,1537914201.348 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:23:21.348Z,1537914201.348 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:23:21.350Z,1537914201.350 [Science:PeakDetectOil] Running Loop=1
2018-09-25T22:23:21.350Z,1537914201.350 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-25T22:23:21.350Z,1537914201.350 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:23:21.350Z,1537914201.350 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:23:21.351Z,1537914201.351 [Science:PeakDetectFDOM] Running Loop=1
2018-09-25T22:23:21.352Z,1537914201.352 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2018-09-25T22:23:21.352Z,1537914201.352 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-25T22:23:21.352Z,1537914201.352 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-25T22:23:21.354Z,1537914201.354 [Science:PeakDetectFDOM] Stopped
2018-09-25T22:23:21.354Z,1537914201.354 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2018-09-25T22:23:21.354Z,1537914201.354 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-25T22:23:21.354Z,1537914201.354 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectOil] Stopped
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectNO3] Stopped
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-25T22:23:21.355Z,1537914201.355 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:23:21.355Z,1537914201.355 [Science:HighestChlPeakReport] Stopped
2018-09-25T22:23:21.355Z,1537914201.355 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-25T22:23:21.356Z,1537914201.356 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-25T22:23:21.356Z,1537914201.356 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-25T22:23:21.356Z,1537914201.356 [Science:PeakDetectChl] Stopped
2018-09-25T22:23:21.356Z,1537914201.356 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-25T22:23:21.356Z,1537914201.356 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-25T22:23:21.356Z,1537914201.356 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-25T22:23:21.356Z,1537914201.356 [Science:Read_Oil] Running Loop=1
2018-09-25T22:23:21.357Z,1537914201.357 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-25T22:23:21.358Z,1537914201.358 [Science:G] Stopped
2018-09-25T22:23:21.358Z,1537914201.358 [Science:F] Stopped
2018-09-25T22:23:21.358Z,1537914201.358 [Science:E] Stopped
2018-09-25T22:23:21.358Z,1537914201.358 [Science:D] Stopped
2018-09-25T22:23:21.358Z,1537914201.358 [Science:C] Running Loop=1
2018-09-25T22:23:21.359Z,1537914201.359 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-25T22:23:21.359Z,1537914201.359 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-25T22:23:21.360Z,1537914201.360 [Science:B] Stopped
2018-09-25T22:23:21.360Z,1537914201.360 [Science:A] Running Loop=1
2018-09-25T22:23:21.361Z,1537914201.361 [Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-25T22:23:21.398Z,1537914201.398 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:21.521Z,1537914201.521 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:21.715Z,1537914201.715 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:21.715Z,1537914201.715 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:23:21.929Z,1537914201.929 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:22.337Z,1537914202.337 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:22.745Z,1537914202.745 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:26.479Z,1537914206.479 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		254.023		95.954		23.605		28.708		29.936		39.211		9.275		720.7		896.2		53.0	


2018-09-25T22:23:26.480Z,1537914206.480 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:23:26.837Z,1537914206.837 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:27.001Z,1537914207.001 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 1
2018-09-25T22:23:27.001Z,1537914207.001 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:23:27.281Z,1537914207.281 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		254.225		96.031		23.606		28.699		29.927		39.192		9.266		719.4		891.4		53.0	


2018-09-25T22:23:27.281Z,1537914207.281 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:23:27.365Z,1537914207.365 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:27.501Z,1537914207.501 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:23:27.653Z,1537914207.653 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:28.480Z,1537914208.480 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		254.214		96.027		23.606		28.699		29.927		39.188		9.261		719.4		890.2		53.0	



2018-09-25T22:23:28.480Z,1537914208.480 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:23:28.669Z,1537914208.669 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:28.980Z,1537914208.980 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:23:28.980Z,1537914208.980 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 1
2018-09-25T22:23:29.120Z,1537914209.120 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:29.120Z,1537914209.120 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:23:29.682Z,1537914209.682 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		254.158		96.006		23.606		28.701		29.929		39.189		9.260		714.0		888.6		53.0	

2018-09-25T22:23:29.682Z,1537914209.682 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-25T22:23:32.491Z,1537914212.491 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-25T22:23:32.491Z,1537914212.491 [NAL9602] Data Fault, FailCount= 1
2018-09-25T22:23:32.491Z,1537914212.491 [NAL9602](ERROR): Data Fault
2018-09-25T22:23:32.546Z,1537914212.546 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-25T22:23:32.895Z,1537914212.895 [NAL9602](INFO): Powering down
2018-09-25T22:23:33.750Z,1537914213.750 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-25T22:23:33.750Z,1537914213.750 [NAL9602] No Fault, FailCount= 1
2018-09-25T22:23:34.165Z,1537914214.165 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:34.425Z,1537914214.425 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 2
2018-09-25T22:23:34.425Z,1537914214.425 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:23:34.578Z,1537914214.578 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:34.925Z,1537914214.925 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:23:34.994Z,1537914214.994 [CommandLine](IMPORTANT): got command show variable organic
2018-09-25T22:23:34.996Z,1537914214.996 [CommandLine](IMPORTANT): concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (unknown)
2018-09-25T22:23:35.187Z,1537914215.187 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (part_per_billion)
2018-09-25T22:23:36.170Z,1537914216.170 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:23:36.170Z,1537914216.170 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 2
2018-09-25T22:23:36.549Z,1537914216.549 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:36.550Z,1537914216.550 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:23:37.805Z,1537914217.805 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:38.821Z,1537914218.821 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:41.461Z,1537914221.461 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:41.864Z,1537914221.864 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 3
2018-09-25T22:23:41.864Z,1537914221.864 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:23:42.184Z,1537914222.184 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:42.365Z,1537914222.365 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:23:43.485Z,1537914223.485 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:43.756Z,1537914223.756 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:23:43.757Z,1537914223.757 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 3
2018-09-25T22:23:43.982Z,1537914223.982 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:43.983Z,1537914223.983 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:23:47.953Z,1537914227.953 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:48.977Z,1537914228.977 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:49.269Z,1537914229.269 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 4
2018-09-25T22:23:49.269Z,1537914229.269 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:23:49.365Z,1537914229.365 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:49.769Z,1537914229.769 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:23:49.993Z,1537914229.993 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:50.983Z,1537914230.983 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:23:50.983Z,1537914230.983 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 4
2018-09-25T22:23:51.393Z,1537914231.393 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:23:51.393Z,1537914231.393 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:23:56.297Z,1537914236.297 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:56.690Z,1537914236.690 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 5
2018-09-25T22:23:56.690Z,1537914236.690 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:23:57.008Z,1537914237.008 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:57.013Z,1537914237.013 [CBIT](FAULT): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:23:57.189Z,1537914237.189 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:23:58.109Z,1537914238.109 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:23:59.133Z,1537914239.133 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:00.157Z,1537914240.157 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:03.287Z,1537914243.287 [NAL9602](INFO): Powering up NAL9602
2018-09-25T22:24:05.633Z,1537914245.633 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:07.461Z,1537914247.461 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:10.305Z,1537914250.305 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:11.933Z,1537914251.933 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:14.887Z,1537914254.887 [NAL9602](INFO): NAL9602 initialized
2018-09-25T22:24:16.809Z,1537914256.809 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:18.835Z,1537914258.835 [CommandLine](IMPORTANT): got command report touch concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
2018-09-25T22:24:19.445Z,1537914259.445 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:20.453Z,1537914260.453 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-25T22:24:20.483Z,1537914260.483 [CommandLine](IMPORTANT): got command stop
2018-09-25T22:24:20.483Z,1537914260.483 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-25T22:24:20.568Z,1537914260.568 [MissionManager](INFO): MissionManager is completed.
2018-09-25T22:24:20.568Z,1537914260.568 [MissionManager](INFO): Uninitializing Mission Science
2018-09-25T22:24:20.568Z,1537914260.568 [Science] Stopped
2018-09-25T22:24:20.568Z,1537914260.569 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-25T22:24:20.573Z,1537914260.573 [Science:A] Stopped
2018-09-25T22:24:20.573Z,1537914260.573 [Science:C] Stopped
2018-09-25T22:24:20.573Z,1537914260.573 [Science:Read_Oil] Stopped
2018-09-25T22:24:20.928Z,1537914260.928 [MissionManager](IMPORTANT): Started mission Default
2018-09-25T22:24:20.928Z,1537914260.928 [Default] Running Loop=1
2018-09-25T22:24:20.928Z,1537914260.928 [Default](DEBUG): Aggregate::initialize Default
2018-09-25T22:24:20.928Z,1537914260.928 [Default:B.GoToSurface] Running Loop=1
2018-09-25T22:24:20.928Z,1537914260.928 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T22:24:20.933Z,1537914260.933 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T22:24:20.933Z,1537914260.933 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T22:24:20.934Z,1537914260.934 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T22:24:20.934Z,1537914260.934 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T22:24:20.934Z,1537914260.934 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T22:24:20.935Z,1537914260.935 [Default:A.Wait] Running Loop=1
2018-09-25T22:24:20.935Z,1537914260.935 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-25T22:24:21.382Z,1537914261.382 [Aanderaa_O2](INFO): Powering down
2018-09-25T22:24:34.144Z,1537914274.144 [Default:A.Wait](INFO): Done Waiting.
2018-09-25T22:24:34.144Z,1537914274.144 [Default:A.Wait] Stopped
2018-09-25T22:24:34.145Z,1537914274.145 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-25T22:24:34.513Z,1537914274.513 [Default:CheckIn] Running Loop=1
2018-09-25T22:24:34.514Z,1537914274.514 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-25T22:24:34.514Z,1537914274.514 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-25T22:24:54.518Z,1537914294.518 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:24:54.519Z,1537914294.519 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 4
2018-09-25T22:24:54.519Z,1537914294.519 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:24:54.521Z,1537914294.521 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:24:54.521Z,1537914294.521 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 4
2018-09-25T22:24:54.521Z,1537914294.521 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:24:54.574Z,1537914294.574 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:24:54.574Z,1537914294.574 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:24:54.975Z,1537914294.975 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:24:54.975Z,1537914294.975 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 4
2018-09-25T22:24:54.975Z,1537914294.975 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:24:54.975Z,1537914294.975 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 4
2018-09-25T22:24:55.302Z,1537914295.302 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:24:55.302Z,1537914295.302 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:24:55.303Z,1537914295.303 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:24:55.303Z,1537914295.303 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:24:55.303Z,1537914295.303 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:24:55.304Z,1537914295.304 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:26:26.813Z,1537914386.813 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:26:26.813Z,1537914386.813 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 5
2018-09-25T22:26:27.129Z,1537914387.129 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:26:27.129Z,1537914387.129 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:26:32.441Z,1537914392.441 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 1
2018-09-25T22:26:32.441Z,1537914392.441 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:26:32.735Z,1537914392.735 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:26:32.941Z,1537914392.941 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:26:34.355Z,1537914394.355 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:26:34.355Z,1537914394.355 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 1
2018-09-25T22:26:34.558Z,1537914394.558 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:26:34.558Z,1537914394.558 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:26:39.874Z,1537914399.874 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 2
2018-09-25T22:26:39.874Z,1537914399.874 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:26:39.967Z,1537914399.967 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:26:40.373Z,1537914400.373 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:26:41.956Z,1537914401.956 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:26:41.956Z,1537914401.956 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 2
2018-09-25T22:26:41.993Z,1537914401.993 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:26:41.993Z,1537914401.993 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:26:47.313Z,1537914407.313 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 3
2018-09-25T22:26:47.313Z,1537914407.313 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:26:47.516Z,1537914407.516 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:26:47.813Z,1537914407.813 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:26:49.127Z,1537914409.127 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:26:49.127Z,1537914409.127 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 3
2018-09-25T22:26:49.430Z,1537914409.430 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:26:49.430Z,1537914409.430 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:26:54.753Z,1537914414.753 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 4
2018-09-25T22:26:54.753Z,1537914414.753 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:26:55.133Z,1537914415.133 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:26:55.254Z,1537914415.254 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:26:56.772Z,1537914416.772 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:26:56.777Z,1537914416.777 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 4
2018-09-25T22:26:56.870Z,1537914416.870 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:26:56.871Z,1537914416.871 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:27:02.173Z,1537914422.173 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 5
2018-09-25T22:27:02.173Z,1537914422.173 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:27:02.328Z,1537914422.328 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:27:02.333Z,1537914422.333 [CBIT](FAULT): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:27:02.677Z,1537914422.677 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:27:55.613Z,1537914475.613 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:27:55.614Z,1537914475.614 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 5
2018-09-25T22:27:55.614Z,1537914475.614 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:27:55.616Z,1537914475.616 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:27:55.616Z,1537914475.616 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 5
2018-09-25T22:27:55.616Z,1537914475.616 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:27:55.629Z,1537914475.629 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:27:55.630Z,1537914475.630 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:27:56.059Z,1537914476.059 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:27:56.059Z,1537914476.059 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 5
2018-09-25T22:27:56.060Z,1537914476.060 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:27:56.060Z,1537914476.060 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 5
2018-09-25T22:27:56.416Z,1537914476.416 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:27:56.417Z,1537914476.417 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:27:56.417Z,1537914476.417 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:27:56.418Z,1537914476.418 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:27:56.418Z,1537914476.418 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:27:56.419Z,1537914476.419 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:29:32.237Z,1537914572.237 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:29:32.237Z,1537914572.237 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 5
2018-09-25T22:29:32.614Z,1537914572.614 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:29:32.614Z,1537914572.614 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:29:34.597Z,1537914574.597 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-25T22:24:34.5Z
2018-09-25T22:29:34.598Z,1537914574.598 [Default:CheckIn:Read_GPS] Stopped
2018-09-25T22:29:34.598Z,1537914574.598 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-25T22:29:35.030Z,1537914575.030 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-25T22:29:37.929Z,1537914577.929 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 1
2018-09-25T22:29:37.929Z,1537914577.929 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:29:38.429Z,1537914578.429 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:29:43.336Z,1537914583.336 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:29:43.336Z,1537914583.336 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:29:43.336Z,1537914583.336 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 1
2018-09-25T22:29:43.453Z,1537914583.453 [DataOverHttps](INFO): Sending 190 bytes from file Logs/20180925T221241/Courier0004.lzma
2018-09-25T22:29:43.682Z,1537914583.682 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:29:43.683Z,1537914583.683 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:29:44.201Z,1537914584.201 [DataOverHttps](INFO): Moved sent file to Logs/20180925T221241/Courier0004.lzma.bak
2018-09-25T22:29:44.202Z,1537914584.202 [DataOverHttps](INFO): SBD MOMSN=8589125
2018-09-25T22:29:49.001Z,1537914589.001 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 2
2018-09-25T22:29:49.001Z,1537914589.001 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:29:49.502Z,1537914589.502 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:29:50.973Z,1537914590.973 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:29:50.974Z,1537914590.974 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:29:50.974Z,1537914590.974 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 2
2018-09-25T22:29:51.119Z,1537914591.119 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:29:51.119Z,1537914591.119 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:29:56.429Z,1537914596.429 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 3
2018-09-25T22:29:56.429Z,1537914596.429 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:29:56.858Z,1537914596.858 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:29:56.915Z,1537914596.915 [DataOverHttps](INFO): Sending 1112 bytes from file Logs/20180925T221241/Express0001.lzma
2018-09-25T22:29:56.929Z,1537914596.929 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:29:59.399Z,1537914599.399 [DataOverHttps](INFO): Moved sent file to Logs/20180925T221241/Express0001.lzma.bak
2018-09-25T22:29:59.399Z,1537914599.399 [DataOverHttps](INFO): SBD MOMSN=8589128
2018-09-25T22:29:59.572Z,1537914599.572 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:29:59.572Z,1537914599.572 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 3
2018-09-25T22:29:59.769Z,1537914599.769 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:29:59.769Z,1537914599.769 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:30:05.085Z,1537914605.085 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 4
2018-09-25T22:30:05.085Z,1537914605.085 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:30:05.512Z,1537914605.512 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:30:05.585Z,1537914605.585 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:30:06.885Z,1537914606.885 [CBIT](INFO): Clearing failed state for component WetLabsSeaOWL_UV_A
2018-09-25T22:30:06.886Z,1537914606.886 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 4
2018-09-25T22:30:07.230Z,1537914607.230 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:30:07.231Z,1537914607.231 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:30:12.517Z,1537914612.517 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 5
2018-09-25T22:30:12.517Z,1537914612.517 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:30:13.017Z,1537914613.017 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:30:14.519Z,1537914614.519 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:30:14.520Z,1537914614.520 [CBIT](FAULT): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:30:14.877Z,1537914614.877 [DataOverHttps](INFO): Sending 1395 bytes from file Logs/20180925T221241/Express0005.lzma
2018-09-25T22:30:15.541Z,1537914615.541 [DataOverHttps](INFO): Moved sent file to Logs/20180925T221241/Express0005.lzma.bak
2018-09-25T22:30:15.541Z,1537914615.541 [DataOverHttps](INFO): SBD MOMSN=8589156
2018-09-25T22:30:16.492Z,1537914616.492 [Default:CheckIn:Read_Iridium] Stopped
2018-09-25T22:30:16.492Z,1537914616.492 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-25T22:30:16.513Z,1537914616.513 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-25T22:30:56.469Z,1537914656.469 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:30:56.470Z,1537914656.470 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 6
2018-09-25T22:30:56.470Z,1537914656.470 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T22:30:56.472Z,1537914656.472 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T22:30:56.472Z,1537914656.472 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 6
2018-09-25T22:30:56.472Z,1537914656.472 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T22:30:56.555Z,1537914656.555 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T22:30:56.556Z,1537914656.556 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T22:30:56.928Z,1537914656.928 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T22:30:56.928Z,1537914656.928 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 6
2018-09-25T22:30:56.929Z,1537914656.929 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T22:30:56.929Z,1537914656.929 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 6
2018-09-25T22:30:57.210Z,1537914657.210 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T22:30:57.210Z,1537914657.210 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:30:57.211Z,1537914657.211 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:30:57.211Z,1537914657.211 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T22:30:57.211Z,1537914657.211 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T22:30:57.212Z,1537914657.212 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T22:31:38.932Z,1537914698.932 [CommandLine](IMPORTANT): got command failComponent
2018-09-25T22:31:38.932Z,1537914698.932 [CommandLine](IMPORTANT): Failed components:
2018-09-25T22:31:38.932Z,1537914698.932 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A: Communications Fault
2018-09-25T22:31:51.176Z,1537914711.176 [CommandLine](IMPORTANT): got command failComponent none WetLabsSeaOWL_UV_A
2018-09-25T22:31:51.176Z,1537914711.176 [WetLabsSeaOWL_UV_A] No Fault, FailCount= 5
2018-09-25T22:31:51.176Z,1537914711.176 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A failureMode is No Fault
2018-09-25T22:31:51.250Z,1537914711.250 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-25T22:31:51.250Z,1537914711.250 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-25T22:31:56.585Z,1537914716.585 [WetLabsSeaOWL_UV_A] Communications Fault, FailCount= 6
2018-09-25T22:31:56.585Z,1537914716.585 [WetLabsSeaOWL_UV_A](ERROR): Communications Fault
2018-09-25T22:31:56.987Z,1537914716.987 [CBIT](ERROR): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:31:56.988Z,1537914716.988 [CBIT](FAULT): Communications Fault in component: WetLabsSeaOWL_UV_A
2018-09-25T22:31:57.085Z,1537914717.085 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:32:12.939Z,1537914732.939 [CommandLine](IMPORTANT): got command restart application
2018-09-25T22:32:13.952Z,1537914733.952 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:13.952Z,1537914733.952 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.133Z,1537914734.133 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-09-25T22:32:14.133Z,1537914734.133 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.134Z,1537914734.134 [CommandLine](INFO): Join timeout helper Thread ID is 2266
2018-09-25T22:32:14.135Z,1537914734.135 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-09-25T22:32:14.136Z,1537914734.136 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.139Z,1537914734.139 [NavChartDb](INFO): Join timeout helper Thread ID is 2267
2018-09-25T22:32:14.177Z,1537914734.177 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.177Z,1537914734.177 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.185Z,1537914734.185 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-09-25T22:32:14.185Z,1537914734.185 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.185Z,1537914734.185 [Radio_Surface](INFO): Join timeout helper Thread ID is 2268
2018-09-25T22:32:14.349Z,1537914734.349 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.349Z,1537914734.349 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.361Z,1537914734.361 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2018-09-25T22:32:14.361Z,1537914734.361 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.362Z,1537914734.362 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 2269
2018-09-25T22:32:14.457Z,1537914734.457 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.457Z,1537914734.457 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T22:32:14.458Z,1537914734.458 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.465Z,1537914734.465 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-09-25T22:32:14.465Z,1537914734.465 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.465Z,1537914734.465 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 2270
2018-09-25T22:32:14.825Z,1537914734.825 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.825Z,1537914734.825 [CTD_NeilBrown](INFO): Powering down
2018-09-25T22:32:14.826Z,1537914734.826 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.835Z,1537914734.835 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-09-25T22:32:14.835Z,1537914734.835 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.835Z,1537914734.835 [logger](INFO): Join timeout helper Thread ID is 2271
2018-09-25T22:32:14.865Z,1537914734.865 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.865Z,1537914734.865 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.873Z,1537914734.873 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-09-25T22:32:14.874Z,1537914734.874 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.874Z,1537914734.874 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-09-25T22:32:14.874Z,1537914734.874 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:14.874Z,1537914734.874 [controlThread](INFO): Join timeout helper Thread ID is 2272
2018-09-25T22:32:14.893Z,1537914734.893 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T22:32:14.893Z,1537914734.893 [controlThread](DEBUG): Uninitializing ControlThread
2018-09-25T22:32:14.894Z,1537914734.894 [Aanderaa_O2](INFO): Powering down
2018-09-25T22:32:14.895Z,1537914734.895 [AHRS_M2](INFO): Powering down
2018-09-25T22:32:14.966Z,1537914734.966 [NAL9602](INFO): Powering down
2018-09-25T22:32:15.037Z,1537914735.037 [RDI_Pathfinder](INFO): Powering down
2018-09-25T22:32:15.038Z,1537914735.038 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-25T22:32:15.039Z,1537914735.039 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-09-25T22:32:15.040Z,1537914735.040 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-09-25T22:32:15.041Z,1537914735.041 [MissionManager](INFO): Uninitializing Mission Default
2018-09-25T22:32:15.041Z,1537914735.041 [Default] Stopped
2018-09-25T22:32:15.041Z,1537914735.041 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-25T22:32:15.041Z,1537914735.041 [Default:B.GoToSurface] Stopped
2018-09-25T22:32:15.041Z,1537914735.041 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T22:32:15.041Z,1537914735.041 [Default:CheckIn] Stopped
2018-09-25T22:32:15.041Z,1537914735.041 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-25T22:32:15.041Z,1537914735.041 [Default:CheckIn:C.Wait] Stopped
2018-09-25T22:32:15.041Z,1537914735.041 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-25T22:32:15.045Z,1537914735.045 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-09-25T22:32:15.045Z,1537914735.045 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-09-25T22:32:15.045Z,1537914735.045 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-09-25T22:32:15.046Z,1537914735.046 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-09-25T22:32:15.046Z,1537914735.046 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-25T22:32:15.046Z,1537914735.046 [BuoyancyServo](INFO): Powering down
2018-09-25T22:32:15.061Z,1537914735.061 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-09-25T22:32:15.061Z,1537914735.061 [ElevatorServo](INFO): Powering down
2018-09-25T22:32:15.062Z,1537914735.062 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-09-25T22:32:15.062Z,1537914735.062 [MassServo](INFO): Powering down
2018-09-25T22:32:15.063Z,1537914735.063 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-09-25T22:32:15.063Z,1537914735.063 [RudderServo](INFO): Powering down
2018-09-25T22:32:15.064Z,1537914735.064 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-25T22:32:15.064Z,1537914735.064 [ThrusterServo](INFO): Powering down
2018-09-25T22:32:15.065Z,1537914735.065 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-09-25T22:32:15.065Z,1537914735.065 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-09-25T22:32:15.066Z,1537914735.066 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-09-25T22:32:15.067Z,1537914735.067 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:15.131Z,1537914735.131 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:15.134Z,1537914735.134 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:15.197Z,1537914735.197 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:15.248Z,1537914735.248 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T22:32:15.305Z,1537914735.305 [logger ThreadHandler](INFO): Thread cancelled.