2018-09-25T20:00:44.884Z,1537905644.884 [Supervisor](DEBUG): Initializing supervisor.
2018-09-25T20:00:44.887Z,1537905644.887 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-09-25T20:00:44.887Z,1537905644.887 [SyncHandler](INFO): Protected caller Thread ID is 799
2018-09-25T20:00:44.888Z,1537905644.888 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-09-25T20:00:44.888Z,1537905644.888 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-09-25T20:00:44.889Z,1537905644.889 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 800
2018-09-25T20:00:44.892Z,1537905644.892 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-09-25T20:00:44.904Z,1537905644.904 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-09-25T20:00:44.905Z,1537905644.905 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-09-25T20:00:44.905Z,1537905644.905 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 801
2018-09-25T20:00:44.906Z,1537905644.906 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-09-25T20:00:44.907Z,1537905644.907 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-09-25T20:00:44.907Z,1537905644.907 [logger ThreadHandler](INFO): Protected caller Thread ID is 802
2018-09-25T20:00:44.909Z,1537905644.909 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-09-25T20:00:44.910Z,1537905644.910 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-09-25T20:00:44.914Z,1537905644.914 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-09-25T20:00:45.118Z,1537905645.118 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-09-25T20:00:45.118Z,1537905645.118 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-09-25T20:00:45.270Z,1537905645.270 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-09-25T20:00:45.272Z,1537905645.272 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-09-25T20:00:45.650Z,1537905645.650 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-09-25T20:00:45.650Z,1537905645.650 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-09-25T20:00:45.797Z,1537905645.797 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-09-25T20:00:45.799Z,1537905645.799 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-09-25T20:00:45.883Z,1537905645.883 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-09-25T20:00:46.098Z,1537905646.098 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-09-25T20:00:46.099Z,1537905646.099 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-09-25T20:00:46.201Z,1537905646.201 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-09-25T20:00:46.203Z,1537905646.203 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-09-25T20:00:46.578Z,1537905646.578 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-09-25T20:00:46.579Z,1537905646.579 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-09-25T20:00:47.074Z,1537905647.074 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-09-25T20:00:47.076Z,1537905647.076 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-09-25T20:00:47.416Z,1537905647.416 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-09-25T20:00:47.417Z,1537905647.417 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-09-25T20:00:47.961Z,1537905647.961 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-09-25T20:00:47.962Z,1537905647.962 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-09-25T20:00:48.188Z,1537905648.188 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-09-25T20:00:48.189Z,1537905648.189 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-09-25T20:00:48.308Z,1537905648.308 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-09-25T20:00:48.309Z,1537905648.309 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-09-25T20:00:48.931Z,1537905648.931 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-09-25T20:00:48.932Z,1537905648.932 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-09-25T20:00:52.974Z,1537905652.974 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-09-25T20:00:52.976Z,1537905652.976 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-whoidhs/
2018-09-25T20:00:52.981Z,1537905652.981 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Battery.cfg
2018-09-25T20:00:53.223Z,1537905653.223 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-09-25T20:00:53.223Z,1537905653.223 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/BIT.cfg
2018-09-25T20:00:53.325Z,1537905653.325 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Navigation.cfg
2018-09-25T20:00:53.437Z,1537905653.437 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Control.cfg
2018-09-25T20:00:54.298Z,1537905654.298 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Simulator.cfg
2018-09-25T20:00:54.386Z,1537905654.386 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Science.cfg
2018-09-25T20:00:54.529Z,1537905654.529 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Sensor.cfg
2018-09-25T20:00:54.709Z,1537905654.709 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Servo.cfg
2018-09-25T20:00:54.825Z,1537905654.825 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/logger.cfg
2018-09-25T20:00:54.912Z,1537905654.912 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/secure.cfg
2018-09-25T20:00:54.998Z,1537905654.998 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/vehicle.cfg
2018-09-25T20:00:55.204Z,1537905655.204 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-09-25T20:00:55.223Z,1537905655.223 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-09-25T20:00:55.388Z,1537905655.388 [SBIT](DEBUG): Construct Startup Built In Test.
2018-09-25T20:00:55.421Z,1537905655.421 [SBIT] Loaded
2018-09-25T20:00:55.421Z,1537905655.421 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-09-25T20:00:55.422Z,1537905655.422 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-09-25T20:00:55.451Z,1537905655.451 [IBIT] Loaded
2018-09-25T20:00:55.451Z,1537905655.451 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-09-25T20:00:55.455Z,1537905655.455 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-09-25T20:00:55.622Z,1537905655.622 [CBIT] Loaded
2018-09-25T20:00:55.622Z,1537905655.622 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-09-25T20:00:55.623Z,1537905655.623 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-09-25T20:00:55.623Z,1537905655.623 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-09-25T20:00:55.717Z,1537905655.717 [VerticalControl](DEBUG): Construct VerticalControl.
2018-09-25T20:00:55.825Z,1537905655.825 [VerticalControl] Loaded
2018-09-25T20:00:55.826Z,1537905655.826 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-09-25T20:00:55.826Z,1537905655.826 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-09-25T20:00:55.892Z,1537905655.892 [HorizontalControl] Loaded
2018-09-25T20:00:55.892Z,1537905655.892 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-09-25T20:00:55.893Z,1537905655.893 [SpeedControl](DEBUG): Construct SpeedControl.
2018-09-25T20:00:55.899Z,1537905655.899 [SpeedControl] Loaded
2018-09-25T20:00:55.899Z,1537905655.899 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-09-25T20:00:55.900Z,1537905655.900 [LoopControl](DEBUG): Construct LoopControl.
2018-09-25T20:00:55.900Z,1537905655.900 [LoopControl] Loaded
2018-09-25T20:00:55.900Z,1537905655.900 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-09-25T20:00:55.901Z,1537905655.901 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-09-25T20:00:55.902Z,1537905655.902 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-09-25T20:00:55.962Z,1537905655.962 [DepthRateCalculator] Loaded
2018-09-25T20:00:55.962Z,1537905655.962 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-09-25T20:00:55.968Z,1537905655.968 [PitchRateCalculator] Loaded
2018-09-25T20:00:55.968Z,1537905655.968 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-09-25T20:00:55.985Z,1537905655.985 [SpeedCalculator] Loaded
2018-09-25T20:00:55.985Z,1537905655.985 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-09-25T20:00:56.009Z,1537905656.009 [TempGradientCalculator] Loaded
2018-09-25T20:00:56.009Z,1537905656.009 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-09-25T20:00:56.015Z,1537905656.015 [YawRateCalculator] Loaded
2018-09-25T20:00:56.015Z,1537905656.015 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-09-25T20:00:56.047Z,1537905656.047 [ElevatorOffsetCalculator] Loaded
2018-09-25T20:00:56.047Z,1537905656.047 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-09-25T20:00:56.048Z,1537905656.048 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-09-25T20:00:56.048Z,1537905656.048 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-09-25T20:00:56.159Z,1537905656.159 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-09-25T20:00:56.160Z,1537905656.160 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-09-25T20:00:56.462Z,1537905656.462 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-09-25T20:00:56.463Z,1537905656.463 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-09-25T20:00:56.585Z,1537905656.585 [DeadReckonUsingMultipleVelocitySources] Loaded
2018-09-25T20:00:56.585Z,1537905656.585 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2018-09-25T20:00:56.645Z,1537905656.645 [DeadReckonUsingSpeedCalculator] Loaded
2018-09-25T20:00:56.646Z,1537905656.646 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-09-25T20:00:56.663Z,1537905656.663 [NavChart] Loaded
2018-09-25T20:00:56.664Z,1537905656.664 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-09-25T20:00:56.668Z,1537905656.668 [UniversalFixResidualReporter] Loaded
2018-09-25T20:00:56.668Z,1537905656.668 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-09-25T20:00:56.669Z,1537905656.670 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-09-25T20:00:56.670Z,1537905656.670 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-09-25T20:00:56.695Z,1537905656.695 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-09-25T20:00:56.697Z,1537905656.697 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-09-25T20:00:56.925Z,1537905656.925 [Aanderaa_O2] Loaded
2018-09-25T20:00:56.925Z,1537905656.925 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2018-09-25T20:00:57.010Z,1537905657.010 [CTD_NeilBrown] Loaded
2018-09-25T20:00:57.010Z,1537905657.010 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2018-09-25T20:00:57.012Z,1537905657.012 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 406DB4E0
2018-09-25T20:00:57.012Z,1537905657.012 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 882
2018-09-25T20:00:57.062Z,1537905657.062 [WetLabsSeaOWL_UV_A] Loaded
2018-09-25T20:00:57.063Z,1537905657.063 [ComponentRegistry](DEBUG): Component "WetLabsSeaOWL_UV_A" handled in its own thread.
2018-09-25T20:00:57.064Z,1537905657.064 [WetLabsSeaOWL_UV_A ThreadHandler](DEBUG): Created PCaller Thread at 4070B4E0
2018-09-25T20:00:57.064Z,1537905657.064 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Protected caller Thread ID is 883
2018-09-25T20:00:57.065Z,1537905657.065 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-09-25T20:00:57.066Z,1537905657.066 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-09-25T20:00:57.719Z,1537905657.719 [AHRS_M2] Loaded
2018-09-25T20:00:57.719Z,1537905657.719 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2018-09-25T20:00:57.928Z,1537905657.928 [DataOverHttps] Loaded
2018-09-25T20:00:57.928Z,1537905657.928 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-09-25T20:00:57.980Z,1537905657.980 [Depth_Keller] Loaded
2018-09-25T20:00:57.980Z,1537905657.980 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-09-25T20:00:57.996Z,1537905657.996 [DropWeight] Loaded
2018-09-25T20:00:57.996Z,1537905657.996 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-09-25T20:00:58.147Z,1537905658.147 [NAL9602] Loaded
2018-09-25T20:00:58.147Z,1537905658.147 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-09-25T20:00:58.153Z,1537905658.153 [Onboard] Loaded
2018-09-25T20:00:58.153Z,1537905658.153 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-09-25T20:00:58.160Z,1537905658.160 [Radio_Surface] Loaded
2018-09-25T20:00:58.161Z,1537905658.161 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-09-25T20:00:58.162Z,1537905658.162 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4096C4E0
2018-09-25T20:00:58.162Z,1537905658.162 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 885
2018-09-25T20:00:58.193Z,1537905658.193 [RDI_Pathfinder] Loaded
2018-09-25T20:00:58.193Z,1537905658.193 [ComponentRegistry](DEBUG): SyncComponent "RDI_Pathfinder" handled in the control thread.
2018-09-25T20:00:58.200Z,1537905658.200 [SCPI] Loaded
2018-09-25T20:00:58.200Z,1537905658.200 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2018-09-25T20:01:00.425Z,1537905660.425 [BPC1] Loaded
2018-09-25T20:01:00.426Z,1537905660.426 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-09-25T20:01:00.426Z,1537905660.426 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-09-25T20:01:00.427Z,1537905660.427 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-09-25T20:01:00.557Z,1537905660.557 [BuoyancyServo] Loaded
2018-09-25T20:01:00.557Z,1537905660.557 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-09-25T20:01:00.569Z,1537905660.569 [ElevatorServo] Loaded
2018-09-25T20:01:00.570Z,1537905660.570 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-09-25T20:01:00.581Z,1537905660.581 [MassServo] Loaded
2018-09-25T20:01:00.582Z,1537905660.582 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-09-25T20:01:00.594Z,1537905660.594 [RudderServo] Loaded
2018-09-25T20:01:00.594Z,1537905660.594 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-09-25T20:01:00.606Z,1537905660.606 [ThrusterServo] Loaded
2018-09-25T20:01:00.606Z,1537905660.606 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-09-25T20:01:00.606Z,1537905660.606 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-09-25T20:01:00.607Z,1537905660.607 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-09-25T20:01:00.743Z,1537905660.743 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-09-25T20:01:00.744Z,1537905660.744 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-09-25T20:01:00.783Z,1537905660.783 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-09-25T20:01:00.787Z,1537905660.787 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-09-25T20:01:00.788Z,1537905660.788 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-09-25T20:01:00.794Z,1537905660.794 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-09-25T20:01:00.795Z,1537905660.795 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A154E0
2018-09-25T20:01:00.796Z,1537905660.796 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 887
2018-09-25T20:01:00.800Z,1537905660.800 [Supervisor](INFO): Main Thread ID is 795
2018-09-25T20:01:00.800Z,1537905660.800 [Supervisor](DEBUG): Running supervisor.
2018-09-25T20:01:00.801Z,1537905660.801 [CommandLine ThreadHandler](INFO): Handler Thread ID is 888
2018-09-25T20:01:00.804Z,1537905660.804 [controlThread ThreadHandler](INFO): Handler Thread ID is 889
2018-09-25T20:01:00.804Z,1537905660.804 [controlThread](DEBUG): Initializing ControlThread
2018-09-25T20:01:00.805Z,1537905660.805 [SBIT](INFO): Initialize SBIT Component.
2018-09-25T20:01:00.805Z,1537905660.805 [SBIT](IMPORTANT): git: 2018-09-20-8-gb8bf761
2018-09-25T20:01:00.806Z,1537905660.806 [SBIT](INFO): git hash: b8bf7618aa630d608908cc5b690564dcd1f2bead
2018-09-25T20:01:00.806Z,1537905660.806 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-09-25T20:01:00.806Z,1537905660.806 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-09-25T20:01:00.807Z,1537905660.807 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2018-09-25T20:01:00.808Z,1537905660.808 [IBIT](INFO): Initialize IBIT Component.
2018-09-25T20:01:00.809Z,1537905660.809 [CBIT](DEBUG): Initialize CBIT Component.
2018-09-25T20:01:00.809Z,1537905660.809 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-09-25T20:01:00.810Z,1537905660.810 [logger ThreadHandler](INFO): Handler Thread ID is 890
2018-09-25T20:01:00.837Z,1537905660.837 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 891
2018-09-25T20:01:00.838Z,1537905660.838 [CTD_NeilBrown](INFO): Powering down
2018-09-25T20:01:00.870Z,1537905660.870 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Handler Thread ID is 892
2018-09-25T20:01:00.872Z,1537905660.872 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T20:01:00.904Z,1537905660.904 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 893
2018-09-25T20:01:00.909Z,1537905660.909 [Radio_Surface](INFO): Powering up
2018-09-25T20:01:00.917Z,1537905660.917 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-09-25T20:01:00.919Z,1537905660.919 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-09-25T20:01:00.920Z,1537905660.920 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-09-25T20:01:00.920Z,1537905660.920 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-09-25T20:01:00.920Z,1537905660.920 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-25T20:01:00.921Z,1537905660.921 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-09-25T20:01:00.921Z,1537905660.921 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-09-25T20:01:00.922Z,1537905660.922 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-09-25T20:01:00.922Z,1537905660.922 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-09-25T20:01:00.923Z,1537905660.923 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-09-25T20:01:00.923Z,1537905660.923 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T20:01:00.924Z,1537905660.924 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T20:01:00.924Z,1537905660.924 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T20:01:00.925Z,1537905660.925 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T20:01:00.925Z,1537905660.925 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T20:01:00.926Z,1537905660.926 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T20:01:00.926Z,1537905660.926 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-09-25T20:01:00.927Z,1537905660.927 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-09-25T20:01:00.934Z,1537905660.934 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-09-25T20:01:00.945Z,1537905660.945 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 894
2018-09-25T20:01:00.964Z,1537905660.964 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-09-25T20:01:00.965Z,1537905660.965 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-09-25T20:01:00.965Z,1537905660.965 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-09-25T20:01:00.965Z,1537905660.965 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-09-25T20:01:00.966Z,1537905660.966 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-09-25T20:01:00.966Z,1537905660.966 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-09-25T20:01:00.966Z,1537905660.966 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-09-25T20:01:00.966Z,1537905660.966 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-09-25T20:01:00.966Z,1537905660.966 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-09-25T20:01:00.967Z,1537905660.967 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-09-25T20:01:00.967Z,1537905660.967 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-09-25T20:01:00.967Z,1537905660.967 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-09-25T20:01:00.967Z,1537905660.967 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-09-25T20:01:00.967Z,1537905660.967 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-09-25T20:01:00.968Z,1537905660.968 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-09-25T20:01:00.968Z,1537905660.968 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-09-25T20:01:00.992Z,1537905660.992 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T20:01:01.015Z,1537905661.015 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-09-25T20:01:01.016Z,1537905661.016 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-09-25T20:01:01.095Z,1537905661.095 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-09-25T20:01:01.097Z,1537905661.097 [Default:A.Wait](DEBUG): Construct Wait.
2018-09-25T20:01:01.098Z,1537905661.098 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-25T20:01:01.141Z,1537905661.141 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-09-25T20:01:01.144Z,1537905661.144 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-09-25T20:01:01.165Z,1537905661.165 [Default:E.Execute](DEBUG): Construct Execute.
2018-09-25T20:01:01.168Z,1537905661.168 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-09-25T20:01:01.190Z,1537905661.190 [controlThread](DEBUG): Component order: CycleStarter,Aanderaa_O2,AHRS_M2,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,RDI_Pathfinder,SCPI,BPC1,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-09-25T20:01:01.259Z,1537905661.259 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2018-09-25T20:01:01.394Z,1537905661.394 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-09-25T20:01:01.406Z,1537905661.406 [Depth_Keller](ERROR): Pressure reading out of range: 1913.424561 decibar
2018-09-25T20:01:01.569Z,1537905661.569 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-25T20:01:01.641Z,1537905661.641 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:01.691Z,1537905661.691 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:01.821Z,1537905661.821 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:01.829Z,1537905661.829 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-25T20:01:01.843Z,1537905661.843 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:01.849Z,1537905661.849 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-09-25T20:01:01.863Z,1537905661.863 [MassServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:01.869Z,1537905661.869 [MassServo](DEBUG): Initializing MassServo.
2018-09-25T20:01:01.891Z,1537905661.891 [RudderServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:01.897Z,1537905661.897 [RudderServo](DEBUG): Initializing RudderServo.
2018-09-25T20:01:01.907Z,1537905661.907 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:01.913Z,1537905661.913 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-25T20:01:02.104Z,1537905662.104 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:02.113Z,1537905662.113 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:02.434Z,1537905662.434 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:02.435Z,1537905662.435 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:02.757Z,1537905662.757 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-09-25T20:01:02.757Z,1537905662.757 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-09-25T20:01:02.757Z,1537905662.757 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-25T20:01:02.757Z,1537905662.757 [BuoyancyServo](ERROR): Communications Fault
2018-09-25T20:01:02.969Z,1537905662.969 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-25T20:01:03.016Z,1537905663.016 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:03.033Z,1537905663.033 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:03.039Z,1537905663.039 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-25T20:01:03.040Z,1537905663.040 [BuoyancyServo](INFO): Powering down
2018-09-25T20:01:03.404Z,1537905663.404 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:03.405Z,1537905663.405 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:03.808Z,1537905663.808 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:03.809Z,1537905663.809 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:04.204Z,1537905664.204 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:04.205Z,1537905664.205 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:04.697Z,1537905664.697 [Aanderaa_O2](INFO): Powering down
2018-09-25T20:01:04.825Z,1537905664.825 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:04.826Z,1537905664.826 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:05.041Z,1537905665.041 [AHRS_M2](ERROR): Read RFS packet UART error: serial timeout
2018-09-25T20:01:05.080Z,1537905665.080 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:05.082Z,1537905665.082 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-25T20:01:05.130Z,1537905665.130 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-25T20:01:05.130Z,1537905665.130 [BuoyancyServo] No Fault, FailCount= 1
2018-09-25T20:01:05.420Z,1537905665.420 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-25T20:01:05.538Z,1537905665.538 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-25T20:01:15.025Z,1537905675.025 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-25T20:01:21.459Z,1537905681.459 [SBIT](IMPORTANT): Beginning Startup BIT
2018-09-25T20:01:21.482Z,1537905681.482 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-25T20:01:28.327Z,1537905688.327 [NAL9602](INFO): Powering up NAL9602
2018-09-25T20:01:32.414Z,1537905692.414 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): -0.009054
CHAN A1 (24V): -0.131878
CHAN A2 (12V): -0.007003
CHAN A3 (5V): -0.001874
CHAN B0 (3.3V): 0.000155
CHAN B1 (3.15aV): -0.000098
CHAN B2 (3.15bV): 0.000195
CHAN B3 (GND): 0.002053
OPEN: 0.006836
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-25T20:01:39.335Z,1537905699.335 [NAL9602](INFO): NAL9602 initialized
2018-09-25T20:02:15.551Z,1537905735.551 [SBIT](IMPORTANT): SBIT PASSED
2018-09-25T20:02:15.641Z,1537905735.641 [CommandLine](IMPORTANT): got command configSet list
2018-09-25T20:02:15.642Z,1537905735.642 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-25T20:02:15.643Z,1537905735.643 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour;

2018-09-25T20:02:15.643Z,1537905735.643 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup=1 bool;

2018-09-25T20:02:15.644Z,1537905735.644 [CommandLine](IMPORTANT): CTD_NeilBrown.simulateHardware=0 bool;

2018-09-25T20:02:15.644Z,1537905735.644 [CommandLine](IMPORTANT): CTD_Seabird.loadAtStartup=0 bool;

2018-09-25T20:02:15.644Z,1537905735.644 [CommandLine](IMPORTANT): CTD_Seabird.simulateHardware=1 bool;

2018-09-25T20:02:15.644Z,1537905735.644 [CommandLine](IMPORTANT): Express linearApproximation RDI_Pathfinder.height_above_sea_floor 5.000000 meter;

2018-09-25T20:02:15.645Z,1537905735.645 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter;

2018-09-25T20:02:15.645Z,1537905735.645 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-09-25T20:02:15.645Z,1537905735.645 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt;

2018-09-25T20:02:15.646Z,1537905735.646 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool;

2018-09-25T20:02:15.646Z,1537905735.646 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter;

2018-09-25T20:02:15.646Z,1537905735.646 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter;

2018-09-25T20:02:15.977Z,1537905735.977 [MissionManager](IMPORTANT): Started mission Startup
2018-09-25T20:02:15.978Z,1537905735.978 [Startup] Running Loop=1
2018-09-25T20:02:15.978Z,1537905735.978 [Startup](DEBUG): Aggregate::initialize Startup
2018-09-25T20:02:15.978Z,1537905735.978 [Startup:A.GoToSurface] Running Loop=1
2018-09-25T20:02:15.978Z,1537905735.978 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T20:02:15.979Z,1537905735.979 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T20:02:15.979Z,1537905735.979 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T20:02:15.979Z,1537905735.979 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T20:02:15.980Z,1537905735.980 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T20:02:15.980Z,1537905735.980 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T20:02:15.986Z,1537905735.986 [Startup:StartupSatComms] Running Loop=1
2018-09-25T20:02:15.987Z,1537905735.987 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-09-25T20:02:15.987Z,1537905735.987 [Startup:StartupSatComms:A] Running Loop=1
2018-09-25T20:02:16.339Z,1537905736.339 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-25T20:03:16.024Z,1537905796.024 [Startup:StartupSatComms:A](INFO): Timed out from 2018-09-25T20:02:15.0Z
2018-09-25T20:03:16.024Z,1537905796.024 [Startup:StartupSatComms:A] Stopped
2018-09-25T20:03:16.024Z,1537905796.024 [Startup:StartupSatComms:B] Running Loop=1
2018-09-25T20:03:16.363Z,1537905796.363 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-25T20:03:36.807Z,1537905816.807 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T20:03:41.607Z,1537905821.607 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.004442
2018-09-25T20:03:45.748Z,1537905825.748 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2018-09-25T20:03:45.831Z,1537905825.831 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180925T183401/Courier0025.lzma
2018-09-25T20:03:46.604Z,1537905826.604 [DataOverHttps](INFO): Moved sent file to Logs/20180925T183401/Courier0025.lzma.bak
2018-09-25T20:03:46.605Z,1537905826.605 [DataOverHttps](INFO): SBD MOMSN=8587347
2018-09-25T20:03:46.681Z,1537905826.681 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8b,0ffd, 15.826, -0.006, 0.000
2018-09-25T20:03:56.923Z,1537905836.923 [DataOverHttps](INFO): Sending 167 bytes from file Logs/20180925T194816/Courier0000.lzma
2018-09-25T20:03:57.708Z,1537905837.708 [DataOverHttps](INFO): Moved sent file to Logs/20180925T194816/Courier0000.lzma.bak
2018-09-25T20:03:57.708Z,1537905837.708 [DataOverHttps](INFO): SBD MOMSN=8587349
2018-09-25T20:04:02.559Z,1537905842.559 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T20:04:02.559Z,1537905842.559 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 1
2018-09-25T20:04:02.559Z,1537905842.559 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-25T20:04:02.561Z,1537905842.561 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-25T20:04:02.561Z,1537905842.561 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-09-25T20:04:02.561Z,1537905842.561 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-25T20:04:02.599Z,1537905842.599 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-25T20:04:02.599Z,1537905842.599 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-25T20:04:02.743Z,1537905842.743 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-25T20:04:02.743Z,1537905842.743 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 1
2018-09-25T20:04:02.744Z,1537905842.744 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-25T20:04:02.744Z,1537905842.744 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-09-25T20:04:03.114Z,1537905843.114 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-25T20:04:03.114Z,1537905843.114 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T20:04:03.114Z,1537905843.114 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T20:04:03.115Z,1537905843.115 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-25T20:04:03.115Z,1537905843.115 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-25T20:04:03.116Z,1537905843.116 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-25T20:04:08.350Z,1537905848.350 [DataOverHttps](INFO): Sending 18 bytes from file Logs/20180925T194816/Courier0004.lzma
2018-09-25T20:04:09.124Z,1537905849.124 [DataOverHttps](INFO): Moved sent file to Logs/20180925T194816/Courier0004.lzma.bak
2018-09-25T20:04:09.124Z,1537905849.124 [DataOverHttps](INFO): SBD MOMSN=8587353
2018-09-25T20:04:16.325Z,1537905856.325 [Startup:StartupSatComms:B](INFO): Timed out from 2018-09-25T20:03:16.0Z
2018-09-25T20:04:16.325Z,1537905856.325 [Startup:StartupSatComms:B] Stopped
2018-09-25T20:04:16.325Z,1537905856.325 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-09-25T20:04:16.325Z,1537905856.325 [Startup:StartupSatComms] Stopped
2018-09-25T20:04:16.325Z,1537905856.325 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-09-25T20:04:16.326Z,1537905856.326 [Startup](INFO): Completed Startup
2018-09-25T20:04:16.326Z,1537905856.326 [MissionManager](INFO): Startup is completed.
2018-09-25T20:04:16.327Z,1537905856.327 [MissionManager](INFO): Uninitializing Mission Startup
2018-09-25T20:04:16.327Z,1537905856.327 [Startup] Stopped
2018-09-25T20:04:16.327Z,1537905856.327 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-09-25T20:04:16.327Z,1537905856.327 [Startup:A.GoToSurface] Stopped
2018-09-25T20:04:16.327Z,1537905856.327 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T20:04:16.688Z,1537905856.688 [MissionManager](IMPORTANT): Started mission Default
2018-09-25T20:04:16.688Z,1537905856.688 [Default] Running Loop=1
2018-09-25T20:04:16.693Z,1537905856.693 [Default](DEBUG): Aggregate::initialize Default
2018-09-25T20:04:16.693Z,1537905856.693 [Default:B.GoToSurface] Running Loop=1
2018-09-25T20:04:16.693Z,1537905856.693 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-25T20:04:16.693Z,1537905856.693 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-25T20:04:16.694Z,1537905856.694 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-25T20:04:16.694Z,1537905856.694 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-25T20:04:16.694Z,1537905856.694 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-25T20:04:16.695Z,1537905856.695 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-25T20:04:16.695Z,1537905856.695 [Default:A.Wait] Running Loop=1
2018-09-25T20:04:16.695Z,1537905856.695 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-25T20:04:20.402Z,1537905860.402 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T20:04:20.479Z,1537905860.479 [DataOverHttps](INFO): Sending 225 bytes from file Logs/20180925T195812/Courier0000.lzma
2018-09-25T20:04:21.271Z,1537905861.271 [DataOverHttps](INFO): Moved sent file to Logs/20180925T195812/Courier0000.lzma.bak
2018-09-25T20:04:21.271Z,1537905861.271 [DataOverHttps](INFO): SBD MOMSN=8587355
2018-09-25T20:04:29.808Z,1537905869.808 [Default:A.Wait](INFO): Done Waiting.
2018-09-25T20:04:29.808Z,1537905869.808 [Default:A.Wait] Stopped
2018-09-25T20:04:29.808Z,1537905869.808 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-25T20:04:30.110Z,1537905870.110 [Default:CheckIn] Running Loop=1
2018-09-25T20:04:30.111Z,1537905870.111 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-25T20:04:30.111Z,1537905870.111 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-25T20:04:30.524Z,1537905870.524 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-25T20:05:10.170Z,1537905910.170 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T20:05:17.641Z,1537905917.641 [CommandLine](IMPORTANT): got command show variable organic
2018-09-25T20:05:17.674Z,1537905917.674 [CommandLine](IMPORTANT): concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (unknown)
2018-09-25T20:05:17.918Z,1537905917.918 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (part_per_billion)
2018-09-25T20:05:45.098Z,1537905945.098 [CommandLine](IMPORTANT): got command show variable organic
2018-09-25T20:05:45.100Z,1537905945.100 [CommandLine](IMPORTANT): concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (unknown)
2018-09-25T20:05:45.230Z,1537905945.230 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate (part_per_billion)
2018-09-25T20:05:59.692Z,1537905959.692 [CommandLine](IMPORTANT): got command report touch concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
2018-09-25T20:06:02.630Z,1537905962.630 [CommandLine](IMPORTANT): got command show variable psu
2018-09-25T20:06:05.822Z,1537905965.822 [CommandLine](IMPORTANT): got command show variable salinity
2018-09-25T20:06:05.829Z,1537905965.829 [CommandLine](IMPORTANT): sea_water_salinity (unknown)
2018-09-25T20:06:05.892Z,1537905965.892 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound (practical_salinity_unit)
2018-09-25T20:06:05.892Z,1537905965.892 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound (practical_salinity_unit)
2018-09-25T20:06:05.924Z,1537905965.924 [CommandLine](IMPORTANT): CTD_Seabird.maxSalinityBound (practical_salinity_unit)
2018-09-25T20:06:05.924Z,1537905965.924 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound (practical_salinity_unit)
2018-09-25T20:06:06.074Z,1537905966.074 [CommandLine](IMPORTANT): CTD_NeilBrown.sea_water_salinity (practical_salinity_unit)
2018-09-25T20:06:06.075Z,1537905966.075 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_median_sea_water_salinity (practical_salinity_unit)
2018-09-25T20:06:06.075Z,1537905966.075 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_mean_sea_water_salinity (practical_salinity_unit)
2018-09-25T20:06:06.076Z,1537905966.076 [CommandLine](IMPORTANT): CTD_NeilBrown.bin_standard_deviation_sea_water_salinity (practical_salinity_unit)
2018-09-25T20:06:23.521Z,1537905983.521 [CommandLine](IMPORTANT): got command get CTD_Seabird.minSalinityBound
2018-09-25T20:06:23.521Z,1537905983.521 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound 28.000001 psu
2018-09-25T20:06:24.975Z,1537905984.975 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-25T20:06:32.567Z,1537905992.567 [CommandLine](IMPORTANT): got command get CTD_Seabird.maxSalinityBound
2018-09-25T20:06:32.568Z,1537905992.568 [CommandLine](IMPORTANT): CTD_Seabird.maxSalinityBound 37.999999 psu
2018-09-25T20:06:43.087Z,1537906003.087 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2018-09-25T20:06:44.860Z,1537906004.860 [CommandLine](IMPORTANT): got command configSet CTD_Seabird.minSalinityBound 0.000000 practical_salinity_unit persist
2018-09-25T20:06:55.958Z,1537906015.958 [CommandLine](IMPORTANT): got command restart application
2018-09-25T20:06:56.961Z,1537906016.961 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-09-25T20:06:56.964Z,1537906016.964 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:56.964Z,1537906016.964 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.025Z,1537906017.025 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-09-25T20:06:57.025Z,1537906017.025 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.026Z,1537906017.026 [CommandLine](INFO): Join timeout helper Thread ID is 940
2018-09-25T20:06:57.029Z,1537906017.029 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-09-25T20:06:57.029Z,1537906017.029 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.029Z,1537906017.029 [NavChartDb](INFO): Join timeout helper Thread ID is 941
2018-09-25T20:06:57.045Z,1537906017.045 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:57.045Z,1537906017.045 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.057Z,1537906017.057 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-09-25T20:06:57.057Z,1537906017.057 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.057Z,1537906017.057 [Radio_Surface](INFO): Join timeout helper Thread ID is 942
2018-09-25T20:06:57.397Z,1537906017.397 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:57.397Z,1537906017.397 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.417Z,1537906017.417 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2018-09-25T20:06:57.417Z,1537906017.417 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.417Z,1537906017.417 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 943
2018-09-25T20:06:57.809Z,1537906017.809 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:57.809Z,1537906017.809 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-25T20:06:57.810Z,1537906017.810 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.817Z,1537906017.817 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-09-25T20:06:57.817Z,1537906017.817 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:57.817Z,1537906017.817 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 944
2018-09-25T20:06:58.149Z,1537906018.149 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:58.149Z,1537906018.149 [CTD_NeilBrown](INFO): Powering down
2018-09-25T20:06:58.150Z,1537906018.150 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.158Z,1537906018.158 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-09-25T20:06:58.158Z,1537906018.158 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.158Z,1537906018.158 [logger](INFO): Join timeout helper Thread ID is 945
2018-09-25T20:06:58.181Z,1537906018.181 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:58.181Z,1537906018.181 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.197Z,1537906018.197 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-09-25T20:06:58.198Z,1537906018.198 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.198Z,1537906018.198 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-09-25T20:06:58.198Z,1537906018.198 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.198Z,1537906018.198 [controlThread](INFO): Join timeout helper Thread ID is 946
2018-09-25T20:06:58.273Z,1537906018.273 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-25T20:06:58.273Z,1537906018.273 [controlThread](DEBUG): Uninitializing ControlThread
2018-09-25T20:06:58.274Z,1537906018.274 [Aanderaa_O2](INFO): Powering down
2018-09-25T20:06:58.275Z,1537906018.275 [AHRS_M2](INFO): Powering down
2018-09-25T20:06:58.346Z,1537906018.346 [NAL9602](INFO): Powering down
2018-09-25T20:06:58.417Z,1537906018.417 [RDI_Pathfinder](INFO): Powering down
2018-09-25T20:06:58.419Z,1537906018.419 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-25T20:06:58.420Z,1537906018.420 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-09-25T20:06:58.420Z,1537906018.420 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-09-25T20:06:58.421Z,1537906018.421 [MissionManager](INFO): Uninitializing Mission Default
2018-09-25T20:06:58.421Z,1537906018.421 [Default] Stopped
2018-09-25T20:06:58.421Z,1537906018.421 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-25T20:06:58.422Z,1537906018.422 [Default:B.GoToSurface] Stopped
2018-09-25T20:06:58.422Z,1537906018.422 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-25T20:06:58.422Z,1537906018.422 [Default:CheckIn] Stopped
2018-09-25T20:06:58.422Z,1537906018.422 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-25T20:06:58.422Z,1537906018.422 [Default:CheckIn:Read_GPS] Stopped
2018-09-25T20:06:58.425Z,1537906018.425 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-09-25T20:06:58.425Z,1537906018.425 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-09-25T20:06:58.426Z,1537906018.426 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-09-25T20:06:58.426Z,1537906018.426 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-09-25T20:06:58.426Z,1537906018.426 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-25T20:06:58.426Z,1537906018.426 [BuoyancyServo](INFO): Powering down
2018-09-25T20:06:58.441Z,1537906018.441 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-09-25T20:06:58.441Z,1537906018.441 [ElevatorServo](INFO): Powering down
2018-09-25T20:06:58.442Z,1537906018.442 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-09-25T20:06:58.442Z,1537906018.442 [MassServo](INFO): Powering down
2018-09-25T20:06:58.443Z,1537906018.443 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-09-25T20:06:58.443Z,1537906018.443 [RudderServo](INFO): Powering down
2018-09-25T20:06:58.444Z,1537906018.444 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-25T20:06:58.444Z,1537906018.444 [ThrusterServo](INFO): Powering down
2018-09-25T20:06:58.445Z,1537906018.445 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-09-25T20:06:58.445Z,1537906018.445 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-09-25T20:06:58.446Z,1537906018.446 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-09-25T20:06:58.446Z,1537906018.446 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.503Z,1537906018.503 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.507Z,1537906018.507 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.567Z,1537906018.567 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.610Z,1537906018.610 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-25T20:06:58.670Z,1537906018.670 [logger ThreadHandler](INFO): Thread cancelled.