2019-09-12T18:26:23.073Z,1568312783.073 [Supervisor](DEBUG): Initializing supervisor.
2019-09-12T18:26:23.076Z,1568312783.076 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2019-09-12T18:26:23.077Z,1568312783.077 [SyncHandler](INFO): Protected caller Thread ID is 807
2019-09-12T18:26:23.077Z,1568312783.077 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2019-09-12T18:26:23.078Z,1568312783.078 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2019-09-12T18:26:23.078Z,1568312783.078 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 808
2019-09-12T18:26:23.081Z,1568312783.081 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2019-09-12T18:26:23.092Z,1568312783.092 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2019-09-12T18:26:23.093Z,1568312783.093 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2019-09-12T18:26:23.094Z,1568312783.094 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 809
2019-09-12T18:26:23.095Z,1568312783.095 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2019-09-12T18:26:23.095Z,1568312783.095 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2019-09-12T18:26:23.096Z,1568312783.096 [logger ThreadHandler](INFO): Protected caller Thread ID is 810
2019-09-12T18:26:23.098Z,1568312783.098 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2019-09-12T18:26:23.098Z,1568312783.098 [Supervisor](INFO): Looking for Config files in directory: Config/
2019-09-12T18:26:23.102Z,1568312783.102 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2019-09-12T18:26:23.510Z,1568312783.510 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2019-09-12T18:26:23.512Z,1568312783.512 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2019-09-12T18:26:23.653Z,1568312783.653 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2019-09-12T18:26:23.655Z,1568312783.655 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2019-09-12T18:26:23.736Z,1568312783.736 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2019-09-12T18:26:23.834Z,1568312783.834 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2019-09-12T18:26:23.836Z,1568312783.836 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2019-09-12T18:26:23.930Z,1568312783.930 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2019-09-12T18:26:23.932Z,1568312783.932 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2019-09-12T18:26:24.304Z,1568312784.304 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2019-09-12T18:26:24.306Z,1568312784.306 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2019-09-12T18:26:24.409Z,1568312784.409 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2019-09-12T18:26:24.411Z,1568312784.411 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2019-09-12T18:26:24.861Z,1568312784.861 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2019-09-12T18:26:24.862Z,1568312784.862 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2019-09-12T18:26:25.057Z,1568312785.057 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2019-09-12T18:26:25.058Z,1568312785.058 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2019-09-12T18:26:25.353Z,1568312785.353 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2019-09-12T18:26:25.354Z,1568312785.354 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2019-09-12T18:26:25.562Z,1568312785.562 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2019-09-12T18:26:25.564Z,1568312785.564 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2019-09-12T18:26:25.703Z,1568312785.703 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2019-09-12T18:26:25.704Z,1568312785.704 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2019-09-12T18:26:26.305Z,1568312786.305 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2019-09-12T18:26:26.307Z,1568312786.307 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2019-09-12T18:26:26.649Z,1568312786.649 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2019-09-12T18:26:26.650Z,1568312786.650 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2019-09-12T18:26:27.916Z,1568312787.916 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2019-09-12T18:26:27.918Z,1568312787.918 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-triton/
2019-09-12T18:26:27.921Z,1568312787.921 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/vehicle.cfg
2019-09-12T18:26:28.108Z,1568312788.108 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/secure.cfg
2019-09-12T18:26:28.192Z,1568312788.192 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Science.cfg
2019-09-12T18:26:28.324Z,1568312788.324 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Simulator.cfg
2019-09-12T18:26:28.410Z,1568312788.410 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Battery.cfg
2019-09-12T18:26:28.638Z,1568312788.638 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2019-09-12T18:26:28.639Z,1568312788.639 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/logger.cfg
2019-09-12T18:26:28.737Z,1568312788.737 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Servo.cfg
2019-09-12T18:26:28.846Z,1568312788.846 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Navigation.cfg
2019-09-12T18:26:28.941Z,1568312788.941 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Sensor.cfg
2019-09-12T18:26:29.090Z,1568312789.090 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/Control.cfg
2019-09-12T18:26:29.190Z,1568312789.190 [Supervisor](INFO): Opening Config file at: Config/lrauv-triton/BIT.cfg
2019-09-12T18:26:29.287Z,1568312789.287 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2019-09-12T18:26:29.291Z,1568312789.291 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2019-09-12T18:26:29.316Z,1568312789.316 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2019-09-12T18:26:29.316Z,1568312789.316 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2019-09-12T18:26:29.403Z,1568312789.403 [VerticalControl](DEBUG): Construct VerticalControl.
2019-09-12T18:26:29.516Z,1568312789.516 [VerticalControl] Loaded
2019-09-12T18:26:29.516Z,1568312789.516 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2019-09-12T18:26:29.517Z,1568312789.517 [HorizontalControl](DEBUG): Construct HorizontalControl.
2019-09-12T18:26:29.585Z,1568312789.585 [HorizontalControl] Loaded
2019-09-12T18:26:29.586Z,1568312789.586 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2019-09-12T18:26:29.586Z,1568312789.586 [SpeedControl](DEBUG): Construct SpeedControl.
2019-09-12T18:26:29.592Z,1568312789.592 [SpeedControl] Loaded
2019-09-12T18:26:29.592Z,1568312789.592 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2019-09-12T18:26:29.593Z,1568312789.593 [LoopControl](DEBUG): Construct LoopControl.
2019-09-12T18:26:29.593Z,1568312789.593 [LoopControl] Loaded
2019-09-12T18:26:29.594Z,1568312789.594 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2019-09-12T18:26:29.594Z,1568312789.594 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2019-09-12T18:26:29.596Z,1568312789.596 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2019-09-12T18:26:29.746Z,1568312789.746 [BuoyancyServo] Loaded
2019-09-12T18:26:29.747Z,1568312789.747 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2019-09-12T18:26:29.758Z,1568312789.758 [ElevatorServo] Loaded
2019-09-12T18:26:29.758Z,1568312789.758 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2019-09-12T18:26:29.769Z,1568312789.769 [MassServo] Loaded
2019-09-12T18:26:29.769Z,1568312789.769 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2019-09-12T18:26:29.780Z,1568312789.780 [RudderServo] Loaded
2019-09-12T18:26:29.780Z,1568312789.780 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2019-09-12T18:26:29.791Z,1568312789.791 [ThrusterServo] Loaded
2019-09-12T18:26:29.791Z,1568312789.791 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2019-09-12T18:26:29.792Z,1568312789.792 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2019-09-12T18:26:29.792Z,1568312789.792 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2019-09-12T18:26:29.846Z,1568312789.846 [DepthRateCalculator] Loaded
2019-09-12T18:26:29.847Z,1568312789.847 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2019-09-12T18:26:29.852Z,1568312789.852 [PitchRateCalculator] Loaded
2019-09-12T18:26:29.852Z,1568312789.852 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2019-09-12T18:26:29.868Z,1568312789.868 [SpeedCalculator] Loaded
2019-09-12T18:26:29.868Z,1568312789.868 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2019-09-12T18:26:29.889Z,1568312789.889 [TempGradientCalculator] Loaded
2019-09-12T18:26:29.889Z,1568312789.889 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2019-09-12T18:26:29.894Z,1568312789.894 [YawRateCalculator] Loaded
2019-09-12T18:26:29.895Z,1568312789.895 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2019-09-12T18:26:29.924Z,1568312789.924 [ElevatorOffsetCalculator] Loaded
2019-09-12T18:26:29.924Z,1568312789.924 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2019-09-12T18:26:29.925Z,1568312789.925 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2019-09-12T18:26:29.925Z,1568312789.925 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2019-09-12T18:26:30.045Z,1568312790.045 [DeadReckonUsingMultipleVelocitySources] Loaded
2019-09-12T18:26:30.045Z,1568312790.045 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2019-09-12T18:26:30.065Z,1568312790.065 [NavChart] Loaded
2019-09-12T18:26:30.066Z,1568312790.066 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2019-09-12T18:26:30.070Z,1568312790.070 [UniversalFixResidualReporter] Loaded
2019-09-12T18:26:30.070Z,1568312790.070 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2019-09-12T18:26:30.070Z,1568312790.070 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2019-09-12T18:26:30.071Z,1568312790.071 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2019-09-12T18:26:30.527Z,1568312790.527 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_orientation
2019-09-12T18:26:30.532Z,1568312790.532 [AHRS_M2](INFO): created writer for : platform_orientation
2019-09-12T18:26:30.534Z,1568312790.534 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_magnetic_orientation
2019-09-12T18:26:30.539Z,1568312790.539 [AHRS_M2](INFO): created writer for : platform_magnetic_orientation
2019-09-12T18:26:30.540Z,1568312790.540 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_pitch_angle
2019-09-12T18:26:30.545Z,1568312790.545 [AHRS_M2](INFO): created writer for : platform_pitch_angle
2019-09-12T18:26:30.545Z,1568312790.545 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_roll_angle
2019-09-12T18:26:30.550Z,1568312790.550 [AHRS_M2](INFO): created writer for : platform_roll_angle
2019-09-12T18:26:30.727Z,1568312790.727 [AHRS_M2] Loaded
2019-09-12T18:26:30.727Z,1568312790.727 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2019-09-12T18:26:30.873Z,1568312790.873 [DataOverHttps] Loaded
2019-09-12T18:26:30.873Z,1568312790.873 [ComponentRegistry](DEBUG): Component "DataOverHttps" handled in its own thread.
2019-09-12T18:26:30.874Z,1568312790.874 [DataOverHttps ThreadHandler](DEBUG): Created PCaller Thread at 407F84E0
2019-09-12T18:26:30.874Z,1568312790.874 [DataOverHttps ThreadHandler](INFO): Protected caller Thread ID is 889
2019-09-12T18:26:30.887Z,1568312790.887 [Depth_Keller] Loaded
2019-09-12T18:26:30.888Z,1568312790.888 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2019-09-12T18:26:30.893Z,1568312790.893 [DropWeight] Loaded
2019-09-12T18:26:30.893Z,1568312790.893 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2019-09-12T18:26:30.938Z,1568312790.938 [DVL_micro] Loaded
2019-09-12T18:26:30.939Z,1568312790.939 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2019-09-12T18:26:31.033Z,1568312791.033 [NAL9602] Loaded
2019-09-12T18:26:31.033Z,1568312791.033 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2019-09-12T18:26:31.049Z,1568312791.049 [Onboard] Loaded
2019-09-12T18:26:31.049Z,1568312791.049 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2019-09-12T18:26:31.052Z,1568312791.052 [Radio_Surface] Loaded
2019-09-12T18:26:31.053Z,1568312791.053 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2019-09-12T18:26:31.054Z,1568312791.054 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408284E0
2019-09-12T18:26:31.054Z,1568312791.054 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 890
2019-09-12T18:26:31.180Z,1568312791.180 [DAT] Loaded
2019-09-12T18:26:31.180Z,1568312791.180 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2019-09-12T18:26:33.089Z,1568312793.089 [BPC1] Loaded
2019-09-12T18:26:33.089Z,1568312793.089 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2019-09-12T18:26:33.090Z,1568312793.090 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2019-09-12T18:26:33.091Z,1568312793.091 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2019-09-12T18:26:33.202Z,1568312793.202 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2019-09-12T18:26:33.203Z,1568312793.203 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2019-09-12T18:26:33.330Z,1568312793.330 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2019-09-12T18:26:33.331Z,1568312793.331 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2019-09-12T18:26:33.378Z,1568312793.378 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2019-09-12T18:26:33.379Z,1568312793.379 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2019-09-12T18:26:33.623Z,1568312793.623 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_density
2019-09-12T18:26:33.629Z,1568312793.629 [CTD_Seabird](INFO): created writer for : sea_water_density
2019-09-12T18:26:33.629Z,1568312793.629 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): depth
2019-09-12T18:26:33.634Z,1568312793.634 [CTD_Seabird](INFO): created writer for : depth
2019-09-12T18:26:33.634Z,1568312793.634 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_pressure
2019-09-12T18:26:33.639Z,1568312793.639 [CTD_Seabird](INFO): created writer for : sea_water_pressure
2019-09-12T18:26:33.640Z,1568312793.640 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_salinity
2019-09-12T18:26:33.645Z,1568312793.645 [CTD_Seabird](INFO): created writer for : sea_water_salinity
2019-09-12T18:26:33.646Z,1568312793.646 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_temperature
2019-09-12T18:26:33.651Z,1568312793.651 [CTD_Seabird](INFO): created writer for : sea_water_temperature
2019-09-12T18:26:33.651Z,1568312793.651 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_electrical_conductivity
2019-09-12T18:26:33.657Z,1568312793.657 [CTD_Seabird](INFO): created writer for : sea_water_electrical_conductivity
2019-09-12T18:26:33.657Z,1568312793.657 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): speed_of_sound_in_sea_water
2019-09-12T18:26:33.662Z,1568312793.662 [CTD_Seabird](INFO): created writer for : speed_of_sound_in_sea_water
2019-09-12T18:26:33.663Z,1568312793.663 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): mass_concentration_of_oxygen_in_sea_water
2019-09-12T18:26:33.668Z,1568312793.668 [CTD_Seabird](INFO): created writer for : mass_concentration_of_oxygen_in_sea_water
2019-09-12T18:26:33.669Z,1568312793.669 [CTD_Seabird](DEBUG): LcmSlateWriter::add(DAtaURI): CTD_Seabird.sea_water_dissolved_oxygen_freq
2019-09-12T18:26:33.669Z,1568312793.669 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): dataName: sea_water_dissolved_oxygen_freq
2019-09-12T18:26:33.702Z,1568312793.702 [CTD_Seabird] Loaded
2019-09-12T18:26:33.702Z,1568312793.702 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2019-09-12T18:26:33.703Z,1568312793.703 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 409BF4E0
2019-09-12T18:26:33.704Z,1568312793.704 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 891
2019-09-12T18:26:33.719Z,1568312793.719 [PAR_Licor] Loaded
2019-09-12T18:26:33.719Z,1568312793.719 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2019-09-12T18:26:33.766Z,1568312793.766 [WetLabsBB2FL] Loaded
2019-09-12T18:26:33.766Z,1568312793.766 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2019-09-12T18:26:33.767Z,1568312793.767 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 409EF4E0
2019-09-12T18:26:33.768Z,1568312793.768 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 892
2019-09-12T18:26:33.768Z,1568312793.768 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2019-09-12T18:26:33.769Z,1568312793.769 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2019-09-12T18:26:34.111Z,1568312794.111 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2019-09-12T18:26:34.112Z,1568312794.112 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2019-09-12T18:26:34.268Z,1568312794.268 [SBIT](DEBUG): Construct Startup Built In Test.
2019-09-12T18:26:34.279Z,1568312794.279 [SBIT] Loaded
2019-09-12T18:26:34.279Z,1568312794.279 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2019-09-12T18:26:34.280Z,1568312794.280 [IBIT](DEBUG): Construct Initiated Built In Test.
2019-09-12T18:26:34.291Z,1568312794.291 [IBIT] Loaded
2019-09-12T18:26:34.292Z,1568312794.292 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2019-09-12T18:26:34.295Z,1568312794.295 [CBIT](DEBUG): Construct Continuous Built In Test.
2019-09-12T18:26:34.436Z,1568312794.436 [CBIT] Loaded
2019-09-12T18:26:34.436Z,1568312794.436 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2019-09-12T18:26:34.436Z,1568312794.436 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2019-09-12T18:26:34.440Z,1568312794.440 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2019-09-12T18:26:34.441Z,1568312794.441 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2019-09-12T18:26:34.448Z,1568312794.448 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2019-09-12T18:26:34.449Z,1568312794.449 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40ACE4E0
2019-09-12T18:26:34.449Z,1568312794.449 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 893
2019-09-12T18:26:34.454Z,1568312794.454 [Supervisor](INFO): Main Thread ID is 803
2019-09-12T18:26:34.454Z,1568312794.454 [Supervisor](DEBUG): Running supervisor.
2019-09-12T18:26:34.454Z,1568312794.454 [CommandLine ThreadHandler](INFO): Handler Thread ID is 894
2019-09-12T18:26:34.457Z,1568312794.457 [controlThread ThreadHandler](INFO): Handler Thread ID is 895
2019-09-12T18:26:34.457Z,1568312794.457 [controlThread](DEBUG): Initializing ControlThread
2019-09-12T18:26:34.458Z,1568312794.458 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2019-09-12T18:26:34.459Z,1568312794.459 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2019-09-12T18:26:34.460Z,1568312794.460 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2019-09-12T18:26:34.460Z,1568312794.460 [LoopControl](DEBUG): Initialize LoopControlComponent.
2019-09-12T18:26:34.461Z,1568312794.461 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2019-09-12T18:26:34.462Z,1568312794.462 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2019-09-12T18:26:34.462Z,1568312794.462 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2019-09-12T18:26:34.462Z,1568312794.462 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2019-09-12T18:26:34.463Z,1568312794.463 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2019-09-12T18:26:34.463Z,1568312794.463 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2019-09-12T18:26:34.464Z,1568312794.464 [NavChart](DEBUG): Initialize NavChart Navigation.
2019-09-12T18:26:34.465Z,1568312794.465 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2019-09-12T18:26:34.473Z,1568312794.473 [SBIT](INFO): Initialize SBIT Component.
2019-09-12T18:26:34.473Z,1568312794.473 [SBIT](IMPORTANT): git: 2019-09-12
2019-09-12T18:26:34.474Z,1568312794.474 [SBIT](INFO): git hash: 8af30fbd33015ee783144e7205eaadcd25741a93
2019-09-12T18:26:34.474Z,1568312794.474 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2019-09-12T18:26:34.475Z,1568312794.475 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #1 PREEMPT Tue Dec 18 21:19:28 PST 2018
Kernel Reported: #1 PREEMPT Thu Feb 21 11:17:40 PST 2019
2019-09-12T18:26:34.476Z,1568312794.476 [SBIT](INFO): Beginning SBIT in 30.000000 seconds.
2019-09-12T18:26:34.477Z,1568312794.477 [IBIT](INFO): Initialize IBIT Component.
2019-09-12T18:26:34.478Z,1568312794.478 [CBIT](DEBUG): Initialize CBIT Component.
2019-09-12T18:26:34.479Z,1568312794.479 [logger ThreadHandler](INFO): Handler Thread ID is 896
2019-09-12T18:26:34.489Z,1568312794.489 [CBIT](DEBUG): Initialized mux pins.
2019-09-12T18:26:34.489Z,1568312794.489 [CBIT](DEBUG): Initializing the watchdog timer.
2019-09-12T18:26:34.497Z,1568312794.497 [DataOverHttps ThreadHandler](INFO): Handler Thread ID is 897
2019-09-12T18:26:34.498Z,1568312794.498 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2019-09-12T18:26:34.509Z,1568312794.509 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 898
2019-09-12T18:26:34.513Z,1568312794.513 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2019-09-12T18:26:34.513Z,1568312794.513 [CBIT](DEBUG): Initializing heartbeat.
2019-09-12T18:26:34.521Z,1568312794.521 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 899
2019-09-12T18:26:34.522Z,1568312794.522 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2019-09-12T18:26:34.525Z,1568312794.525 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:26:34.526Z,1568312794.526 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 901
2019-09-12T18:26:34.527Z,1568312794.527 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:26:34.557Z,1568312794.557 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 902
2019-09-12T18:26:34.566Z,1568312794.566 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2019-09-12T18:26:34.566Z,1568312794.566 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2019-09-12T18:26:34.566Z,1568312794.566 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2019-09-12T18:26:34.567Z,1568312794.567 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2019-09-12T18:26:34.567Z,1568312794.567 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2019-09-12T18:26:34.567Z,1568312794.567 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2019-09-12T18:26:34.567Z,1568312794.567 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2019-09-12T18:26:34.567Z,1568312794.567 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2019-09-12T18:26:34.568Z,1568312794.568 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2019-09-12T18:26:34.568Z,1568312794.568 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2019-09-12T18:26:34.568Z,1568312794.568 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2019-09-12T18:26:34.568Z,1568312794.568 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2019-09-12T18:26:34.568Z,1568312794.568 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2019-09-12T18:26:34.569Z,1568312794.569 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2019-09-12T18:26:34.569Z,1568312794.569 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2019-09-12T18:26:34.569Z,1568312794.569 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2019-09-12T18:26:34.585Z,1568312794.585 [CBIT](DEBUG): Deactivating GF circuits.
2019-09-12T18:26:34.585Z,1568312794.585 [CBIT](DEBUG): Deactivating emergency mode.
2019-09-12T18:26:34.621Z,1568312794.621 [CBIT](DEBUG): Backplane powered.
2019-09-12T18:26:34.622Z,1568312794.622 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2019-09-12T18:26:34.654Z,1568312794.654 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2019-09-12T18:26:34.664Z,1568312794.664 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2019-09-12T18:26:34.665Z,1568312794.665 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2019-09-12T18:26:34.722Z,1568312794.722 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2019-09-12T18:26:34.724Z,1568312794.724 [Default:A.Wait](DEBUG): Construct Wait.
2019-09-12T18:26:34.741Z,1568312794.741 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2019-09-12T18:26:34.790Z,1568312794.790 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2019-09-12T18:26:34.792Z,1568312794.792 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2019-09-12T18:26:34.814Z,1568312794.814 [Default:E.Execute](DEBUG): Construct Execute.
2019-09-12T18:26:34.817Z,1568312794.817 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2019-09-12T18:26:34.829Z,1568312794.829 [controlThread](DEBUG): Component order: CycleStarter,AHRS_M2,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,DAT,BPC1,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2019-09-12T18:26:34.841Z,1568312794.841 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2019-09-12T18:26:34.913Z,1568312794.913 [Radio_Surface](INFO): Powering up
2019-09-12T18:26:35.019Z,1568312795.019 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2019-09-12T18:26:35.019Z,1568312795.019 [DAT](INFO): Powering up
2019-09-12T18:26:35.019Z,1568312795.019 [DAT](DEBUG): Initializing DAT.
2019-09-12T18:26:35.053Z,1568312795.053 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2019-09-12T18:26:35.146Z,1568312795.146 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:35.153Z,1568312795.153 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2019-09-12T18:26:35.154Z,1568312795.154 [ElevatorServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:35.161Z,1568312795.161 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2019-09-12T18:26:35.162Z,1568312795.162 [MassServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:35.169Z,1568312795.169 [MassServo](DEBUG): Initializing MassServo.
2019-09-12T18:26:35.170Z,1568312795.170 [RudderServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:35.177Z,1568312795.177 [RudderServo](DEBUG): Initializing RudderServo.
2019-09-12T18:26:35.178Z,1568312795.178 [ThrusterServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:35.185Z,1568312795.185 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2019-09-12T18:26:36.061Z,1568312796.061 [RudderServo](ERROR): Rudder initialization uart error serial timeout
2019-09-12T18:26:36.061Z,1568312796.061 [RudderServo](FAULT): Rudder failed to initialize
2019-09-12T18:26:36.061Z,1568312796.061 [RudderServo] Communications Fault, FailCount= 1
2019-09-12T18:26:36.061Z,1568312796.061 [RudderServo](ERROR): Communications Fault
2019-09-12T18:26:36.196Z,1568312796.196 [CBIT](ERROR): Communications Fault in component: RudderServo
2019-09-12T18:26:36.358Z,1568312796.358 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2019-09-12T18:26:36.358Z,1568312796.358 [RudderServo](INFO): Powering down
2019-09-12T18:26:37.083Z,1568312797.083 [RudderServo](DEBUG): Initializing EZServoServo.
2019-09-12T18:26:37.202Z,1568312797.202 [RudderServo](DEBUG): Initializing RudderServo.
2019-09-12T18:26:37.206Z,1568312797.206 [CBIT](INFO): Clearing failed state for component RudderServo
2019-09-12T18:26:37.206Z,1568312797.206 [RudderServo] No Fault, FailCount= 1
2019-09-12T18:26:48.541Z,1568312808.541 [DAT](INFO): setting local address to 5
2019-09-12T18:26:48.950Z,1568312808.950 [DAT](INFO): set local address to 5
2019-09-12T18:27:01.068Z,1568312821.068 [NAL9602](INFO): Powering up NAL9602
2019-09-12T18:27:05.139Z,1568312825.139 [SBIT](IMPORTANT): Beginning Startup BIT
2019-09-12T18:27:05.147Z,1568312825.147 [CBIT](IMPORTANT): Beginning ground fault scan
2019-09-12T18:27:12.178Z,1568312832.178 [NAL9602](INFO): NAL9602 initialized
2019-09-12T18:27:13.005Z,1568312833.005 [NAL9602](DEBUG): Fix Requested
2019-09-12T18:27:15.956Z,1568312835.956 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): 0.066061
CHAN A1 (24V): 0.265732
CHAN A2 (12V): 0.012531
CHAN A3 (5V): -0.012368
CHAN B0 (3.3V): -0.002093
CHAN B1 (3.15aV): 0.002099
CHAN B2 (3.15bV): 0.003971
CHAN B3 (GND): -0.009905
OPEN: 0.002422
Full Scale Calc: 4.765 mA, -1.589 mA
2019-09-12T18:27:58.953Z,1568312878.953 [SBIT](IMPORTANT): SBIT PASSED
2019-09-12T18:27:59.034Z,1568312879.034 [CommandLine](IMPORTANT): got command configSet list
2019-09-12T18:27:59.034Z,1568312879.034 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2019-09-12T18:27:59.034Z,1568312879.034 [CommandLine](IMPORTANT): No configSet variables persisted
2019-09-12T18:27:59.367Z,1568312879.367 [MissionManager](IMPORTANT): Started mission Startup
2019-09-12T18:27:59.368Z,1568312879.368 [Startup] Running Loop=1
2019-09-12T18:27:59.368Z,1568312879.368 [Startup](DEBUG): Aggregate::initialize Startup
2019-09-12T18:27:59.368Z,1568312879.368 [Startup:A.GoToSurface] Running Loop=1
2019-09-12T18:27:59.368Z,1568312879.368 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:27:59.373Z,1568312879.373 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:27:59.373Z,1568312879.373 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:27:59.374Z,1568312879.374 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:27:59.374Z,1568312879.374 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:27:59.374Z,1568312879.374 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:27:59.376Z,1568312879.376 [Startup:StartupSatComms] Running Loop=1
2019-09-12T18:27:59.376Z,1568312879.376 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2019-09-12T18:27:59.376Z,1568312879.376 [Startup:StartupSatComms:A] Running Loop=1
2019-09-12T18:27:59.765Z,1568312879.765 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2019-09-12T18:28:43.432Z,1568312923.432 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:28:55.485Z,1568312935.485 [DVL_micro](ERROR): only read 0 of 1 data item for BIT error
2019-09-12T18:28:55.485Z,1568312935.485 [DVL_micro](ERROR): Failed to parse:
:TS,00000000000000,.3,0000.0,1489.0,000
2019-09-12T18:28:56.362Z,1568312936.362 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:28:59.559Z,1568312939.559 [Startup:StartupSatComms:A](INFO): Timed out from 2019-09-12T18:27:59.4Z
2019-09-12T18:28:59.559Z,1568312939.559 [Startup:StartupSatComms:A] Stopped
2019-09-12T18:28:59.559Z,1568312939.559 [Startup:StartupSatComms:B] Running Loop=1
2019-09-12T18:28:59.961Z,1568312939.961 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2019-09-12T18:29:09.298Z,1568312949.298 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:29:10.520Z,1568312950.520 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.006159
2019-09-12T18:29:18.041Z,1568312958.041 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20190912T170422/Courier0034.lzma
2019-09-12T18:29:20.046Z,1568312960.046 [DataOverHttps](INFO): Moved sent file to Logs/20190912T170422/Courier0034.lzma.bak
2019-09-12T18:29:20.047Z,1568312960.047 [DataOverHttps](INFO): SBD MOMSN=11776296
2019-09-12T18:29:20.932Z,1568312960.932 [DVL_micro](ERROR): only read 2 of 4 data items
2019-09-12T18:29:20.932Z,1568312960.932 [DVL_micro](ERROR): Failed to parse:
:RD,+9999.99,+99999.99,+

2019-09-12T18:29:34.714Z,1568312974.714 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 1
2019-09-12T18:29:34.714Z,1568312974.714 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2019-09-12T18:29:34.741Z,1568312974.741 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2019-09-12T18:29:35.152Z,1568312975.152 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2019-09-12T18:29:35.152Z,1568312975.152 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 1
2019-09-12T18:29:38.755Z,1568312978.755 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:29:48.458Z,1568312988.458 [DataOverHttps](INFO): Sending 117 bytes from file Logs/20190912T170422/Express0032.lzma
2019-09-12T18:29:50.463Z,1568312990.463 [DataOverHttps](INFO): Moved sent file to Logs/20190912T170422/Express0032.lzma.bak
2019-09-12T18:29:50.464Z,1568312990.464 [DataOverHttps](INFO): SBD MOMSN=11776298
2019-09-12T18:29:52.153Z,1568312992.153 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:29:59.758Z,1568312999.758 [Startup:StartupSatComms:B](INFO): Timed out from 2019-09-12T18:28:59.6Z
2019-09-12T18:29:59.758Z,1568312999.758 [Startup:StartupSatComms:B] Stopped
2019-09-12T18:29:59.759Z,1568312999.759 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2019-09-12T18:29:59.759Z,1568312999.759 [Startup:StartupSatComms] Stopped
2019-09-12T18:29:59.759Z,1568312999.759 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2019-09-12T18:29:59.759Z,1568312999.759 [Startup](INFO): Completed Startup
2019-09-12T18:29:59.760Z,1568312999.760 [MissionManager](INFO): Startup is completed.
2019-09-12T18:29:59.760Z,1568312999.760 [MissionManager](INFO): Uninitializing Mission Startup
2019-09-12T18:29:59.760Z,1568312999.760 [Startup] Stopped
2019-09-12T18:29:59.760Z,1568312999.760 [Startup](DEBUG): Aggregate::uninitialize Startup
2019-09-12T18:29:59.760Z,1568312999.760 [Startup:A.GoToSurface] Stopped
2019-09-12T18:29:59.760Z,1568312999.760 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:30:00.170Z,1568313000.170 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:30:00.170Z,1568313000.170 [Default] Running Loop=1
2019-09-12T18:30:00.170Z,1568313000.170 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:30:00.170Z,1568313000.170 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:30:00.170Z,1568313000.170 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:30:00.171Z,1568313000.171 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:30:00.171Z,1568313000.171 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:30:00.171Z,1568313000.171 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:30:00.172Z,1568313000.172 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:30:00.172Z,1568313000.172 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:30:00.172Z,1568313000.172 [Default:A.Wait] Running Loop=1
2019-09-12T18:30:00.172Z,1568313000.172 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:30:04.169Z,1568313004.169 [DVL_micro](ERROR): only read 3 of 4 data items
2019-09-12T18:30:04.169Z,1568313004.169 [DVL_micro](ERROR): Failed to parse:
:RD,+99999.99,+9999.99,+9999.99
2019-09-12T18:30:05.405Z,1568313005.405 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:30:12.902Z,1568313012.902 [DataOverHttps](INFO): Sending 848 bytes from file Logs/20190912T170422/Express0035.lzma
2019-09-12T18:30:13.480Z,1568313013.480 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:30:13.480Z,1568313013.480 [Default:A.Wait] Stopped
2019-09-12T18:30:13.480Z,1568313013.480 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:30:13.875Z,1568313013.875 [Default:CheckIn] Running Loop=1
2019-09-12T18:30:13.875Z,1568313013.875 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:30:13.875Z,1568313013.875 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:30:14.295Z,1568313014.295 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2019-09-12T18:30:14.906Z,1568313014.906 [DataOverHttps](INFO): Moved sent file to Logs/20190912T170422/Express0035.lzma.bak
2019-09-12T18:30:14.906Z,1568313014.906 [DataOverHttps](INFO): SBD MOMSN=11776301
2019-09-12T18:30:19.529Z,1568313019.529 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:30:21.932Z,1568313021.932 [DVL_micro](ERROR): only read 0 of 1 data item for BIT error
2019-09-12T18:30:21.933Z,1568313021.933 [DVL_micro](ERROR): Failed to parse:
:TS,00000000000000,35.0,+19.3,0000.,000
2019-09-12T18:30:29.862Z,1568313029.862 [CommandLine](IMPORTANT): got command show variable oxygen
2019-09-12T18:30:29.867Z,1568313029.867 [CommandLine](IMPORTANT): mass_concentration_of_oxygen_in_sea_water (unknown)
2019-09-12T18:30:29.902Z,1568313029.902 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffFOffset (none)
2019-09-12T18:30:29.902Z,1568313029.902 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffSoc (none)
2019-09-12T18:30:29.903Z,1568313029.903 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffA (none)
2019-09-12T18:30:29.903Z,1568313029.903 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffB (none)
2019-09-12T18:30:29.903Z,1568313029.903 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffC (none)
2019-09-12T18:30:29.904Z,1568313029.904 [CommandLine](IMPORTANT): CTD_Seabird.oxygenCalCoeffE (none)
2019-09-12T18:30:30.112Z,1568313030.112 [CommandLine](IMPORTANT): CTD_Seabird.mass_concentration_of_oxygen_in_sea_water (microgram_per_liter)
2019-09-12T18:30:30.112Z,1568313030.112 [CommandLine](IMPORTANT): CTD_Seabird.sea_water_dissolved_oxygen_freq (hertz)
2019-09-12T18:30:33.257Z,1568313033.257 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:30:35.943Z,1568313035.943 [CommandLine](IMPORTANT): got command report touch mass_concentration_of_oxygen_in_sea_water
2019-09-12T18:30:39.355Z,1568313039.355 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2019-09-12T18:30:39.355Z,1568313039.355 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2019-09-12T18:30:39.548Z,1568313039.548 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2019-09-12T18:30:39.551Z,1568313039.551 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2019-09-12T18:30:39.554Z,1568313039.554 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2019-09-12T18:30:39.557Z,1568313039.557 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2019-09-12T18:30:39.560Z,1568313039.560 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2019-09-12T18:30:39.563Z,1568313039.563 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2019-09-12T18:30:39.566Z,1568313039.566 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2019-09-12T18:30:39.570Z,1568313039.570 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2019-09-12T18:30:39.574Z,1568313039.574 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2019-09-12T18:30:39.578Z,1568313039.578 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2019-09-12T18:30:39.581Z,1568313039.581 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2019-09-12T18:30:39.585Z,1568313039.585 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2019-09-12T18:30:39.609Z,1568313039.609 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2019-09-12T18:30:39.612Z,1568313039.612 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2019-09-12T18:30:39.629Z,1568313039.629 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2019-09-12T18:30:39.641Z,1568313039.641 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2019-09-12T18:30:39.649Z,1568313039.649 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2019-09-12T18:30:39.657Z,1568313039.657 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2019-09-12T18:30:39.669Z,1568313039.669 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2019-09-12T18:30:39.672Z,1568313039.672 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2019-09-12T18:30:39.680Z,1568313039.680 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2019-09-12T18:30:39.688Z,1568313039.688 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2019-09-12T18:30:39.743Z,1568313039.743 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2019-09-12T18:30:39.750Z,1568313039.750 [MissionManager](INFO): DefineArg Science.MedianFilterLen = 5.000000 count
2019-09-12T18:30:39.762Z,1568313039.762 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2019-09-12T18:30:39.781Z,1568313039.781 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2019-09-12T18:30:39.785Z,1568313039.785 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2019-09-12T18:30:39.788Z,1568313039.788 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2019-09-12T18:30:39.800Z,1568313039.800 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2019-09-12T18:30:39.807Z,1568313039.807 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2019-09-12T18:30:39.823Z,1568313039.823 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2019-09-12T18:30:39.832Z,1568313039.832 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2019-09-12T18:30:39.836Z,1568313039.836 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2019-09-12T18:30:39.844Z,1568313039.844 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2019-09-12T18:30:39.861Z,1568313039.861 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2019-09-12T18:30:39.869Z,1568313039.869 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2019-09-12T18:30:39.872Z,1568313039.872 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2019-09-12T18:30:39.887Z,1568313039.887 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2019-09-12T18:30:39.891Z,1568313039.891 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2019-09-12T18:30:39.897Z,1568313039.897 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2019-09-12T18:30:39.905Z,1568313039.905 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2019-09-12T18:30:39.913Z,1568313039.913 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2019-09-12T18:30:39.925Z,1568313039.925 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2019-09-12T18:30:39.933Z,1568313039.933 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2019-09-12T18:30:39.936Z,1568313039.936 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2019-09-12T18:30:39.947Z,1568313039.947 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2019-09-12T18:30:39.951Z,1568313039.951 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2019-09-12T18:30:39.971Z,1568313039.971 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2019-09-12T18:30:39.975Z,1568313039.975 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2019-09-12T18:30:39.980Z,1568313039.980 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2019-09-12T18:30:39.996Z,1568313039.996 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2019-09-12T18:30:40.047Z,1568313040.047 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:30:40.075Z,1568313040.075 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2019-09-12T18:30:40.139Z,1568313040.139 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:30:40.174Z,1568313040.174 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:30:40.207Z,1568313040.207 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:30:40.290Z,1568313040.290 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_chromophoric_dissolved_organic_matter_in_sea_water from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="MedianFilterLen"><Description>
        Median filter length (only for chlorophyll fluorescence which tends to have spikes)
    </Description><Units:count/><Value>5</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.medianFilterLength/><Arg Name="MedianFilterLen"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_chromophoric_dissolved_organic_matter_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2019-09-12T18:30:40.305Z,1568313040.305 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2019-09-12T18:30:40.557Z,1568313040.557 [Default] Stopped
2019-09-12T18:30:40.557Z,1568313040.557 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:30:40.557Z,1568313040.557 [Default:B.GoToSurface] Stopped
2019-09-12T18:30:40.557Z,1568313040.557 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:30:40.557Z,1568313040.557 [Default:CheckIn] Stopped
2019-09-12T18:30:40.557Z,1568313040.557 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:30:40.558Z,1568313040.558 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:30:40.558Z,1568313040.558 [MissionManager](IMPORTANT): Started mission Science
2019-09-12T18:30:40.558Z,1568313040.558 [Science] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science](DEBUG): Aggregate::initialize Science
2019-09-12T18:30:40.558Z,1568313040.558 [Science:A] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:B] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:C] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:D] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:E] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:F] Running Loop=1
2019-09-12T18:30:40.558Z,1568313040.558 [Science:G] Running Loop=1
2019-09-12T18:30:40.559Z,1568313040.559 [Science:H] Running Loop=1
2019-09-12T18:30:40.559Z,1568313040.559 [Science:Read_Oil] Running Loop=1
2019-09-12T18:30:40.559Z,1568313040.559 [Science:PeakDetectChl] Running Loop=1
2019-09-12T18:30:40.559Z,1568313040.559 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2019-09-12T18:30:40.559Z,1568313040.559 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:30:40.559Z,1568313040.559 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:30:40.567Z,1568313040.567 [Science:HighestChlPeakReport] Running Loop=1
2019-09-12T18:30:40.567Z,1568313040.567 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2019-09-12T18:30:40.568Z,1568313040.568 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2019-09-12T18:30:40.568Z,1568313040.568 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2019-09-12T18:30:40.568Z,1568313040.568 [Science:PeakDetectNO3] Running Loop=1
2019-09-12T18:30:40.568Z,1568313040.568 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2019-09-12T18:30:40.573Z,1568313040.573 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:30:40.573Z,1568313040.573 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:30:40.575Z,1568313040.575 [Science:PeakDetectOil] Running Loop=1
2019-09-12T18:30:40.575Z,1568313040.575 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2019-09-12T18:30:40.575Z,1568313040.575 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:30:40.575Z,1568313040.575 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:30:40.581Z,1568313040.581 [Science:PeakDetectFDOM] Running Loop=1
2019-09-12T18:30:40.581Z,1568313040.581 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2019-09-12T18:30:40.582Z,1568313040.582 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:30:40.582Z,1568313040.582 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:30:40.589Z,1568313040.589 [Science:PeakDetectFDOM] Stopped
2019-09-12T18:30:40.589Z,1568313040.589 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2019-09-12T18:30:40.589Z,1568313040.589 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2019-09-12T18:30:40.589Z,1568313040.589 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:30:40.589Z,1568313040.589 [Science:PeakDetectOil] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectNO3] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:30:40.590Z,1568313040.590 [Science:HighestChlPeakReport] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2019-09-12T18:30:40.590Z,1568313040.590 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2019-09-12T18:30:40.590Z,1568313040.590 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2019-09-12T18:30:40.590Z,1568313040.590 [Science:PeakDetectChl] Stopped
2019-09-12T18:30:40.591Z,1568313040.591 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2019-09-12T18:30:40.591Z,1568313040.591 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2019-09-12T18:30:40.591Z,1568313040.591 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:30:40.591Z,1568313040.591 [Science:Read_Oil] Stopped
2019-09-12T18:30:40.591Z,1568313040.591 [Science:H] Stopped
2019-09-12T18:30:40.591Z,1568313040.591 [Science:G] Running Loop=1
2019-09-12T18:30:40.592Z,1568313040.592 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2019-09-12T18:30:40.592Z,1568313040.592 [Science:F] Stopped
2019-09-12T18:30:40.592Z,1568313040.592 [Science:E] Stopped
2019-09-12T18:30:40.592Z,1568313040.592 [Science:D] Running Loop=1
2019-09-12T18:30:40.597Z,1568313040.597 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2019-09-12T18:30:40.597Z,1568313040.597 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2019-09-12T18:30:40.597Z,1568313040.597 [Science:C] Running Loop=1
2019-09-12T18:30:40.598Z,1568313040.598 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2019-09-12T18:30:40.599Z,1568313040.599 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2019-09-12T18:30:40.599Z,1568313040.599 [Science:B] Stopped
2019-09-12T18:30:40.599Z,1568313040.599 [Science:A] Stopped
2019-09-12T18:30:41.022Z,1568313041.022 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2019-09-12T18:30:41.022Z,1568313041.022 [WetLabsBB2FL](INFO): Powering up
2019-09-12T18:30:41.546Z,1568313041.546 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:30:44.559Z,1568313044.559 [CTD_Seabird](ERROR): Failed to parse device response: <!--startlogging-->
2019-09-12T18:30:46.567Z,1568313046.567 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:30:47.059Z,1568313047.059 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:30:47.571Z,1568313047.571 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:30:48.670Z,1568313048.670 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:49.579Z,1568313049.579 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:30:50.583Z,1568313050.583 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:30:51.881Z,1568313051.881 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:52.702Z,1568313052.702 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:53.928Z,1568313053.928 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:54.749Z,1568313054.749 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:55.603Z,1568313055.603 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:30:56.728Z,1568313056.728 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:57.966Z,1568313057.966 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:30:58.105Z,1568313058.105 [CommandLine](IMPORTANT): got command stop
2019-09-12T18:30:58.106Z,1568313058.106 [CommandLine](IMPORTANT): Scheduling is paused
2019-09-12T18:30:58.106Z,1568313058.106 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2019-09-12T18:30:58.345Z,1568313058.345 [MissionManager](INFO): MissionManager is completed.
2019-09-12T18:30:58.345Z,1568313058.345 [MissionManager](INFO): Uninitializing Mission Science
2019-09-12T18:30:58.345Z,1568313058.345 [Science] Stopped
2019-09-12T18:30:58.345Z,1568313058.345 [Science](DEBUG): Aggregate::uninitialize Science
2019-09-12T18:30:58.345Z,1568313058.345 [Science:C] Stopped
2019-09-12T18:30:58.345Z,1568313058.345 [Science:D] Stopped
2019-09-12T18:30:58.345Z,1568313058.345 [Science:G] Stopped
2019-09-12T18:30:58.746Z,1568313058.746 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:30:58.746Z,1568313058.746 [Default] Running Loop=1
2019-09-12T18:30:58.746Z,1568313058.746 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:30:58.746Z,1568313058.746 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:30:58.746Z,1568313058.746 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:30:58.747Z,1568313058.747 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:30:58.747Z,1568313058.747 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:30:58.747Z,1568313058.747 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:30:58.748Z,1568313058.748 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:30:58.748Z,1568313058.748 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:30:58.748Z,1568313058.748 [Default:A.Wait] Running Loop=1
2019-09-12T18:30:58.748Z,1568313058.748 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:30:58.765Z,1568313058.765 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:31:01.146Z,1568313061.146 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:31:05.160Z,1568313065.160 [DVL_micro](ERROR): only read 0 of 1 data item for BIT error
2019-09-12T18:31:05.160Z,1568313065.160 [DVL_micro](ERROR): Failed to parse:
:TS,000000,35.0000.0,14
2019-09-12T18:31:12.056Z,1568313072.056 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:31:12.056Z,1568313072.056 [Default:A.Wait] Stopped
2019-09-12T18:31:12.056Z,1568313072.056 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:31:12.474Z,1568313072.474 [Default:CheckIn] Running Loop=1
2019-09-12T18:31:12.474Z,1568313072.474 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:31:12.474Z,1568313072.474 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:31:14.888Z,1568313074.888 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:31:29.013Z,1568313089.013 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:31:33.067Z,1568313093.067 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2019-09-12T18:31:33.068Z,1568313093.068 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2019-09-12T18:31:33.289Z,1568313093.289 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2019-09-12T18:31:33.292Z,1568313093.292 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2019-09-12T18:31:33.294Z,1568313093.294 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2019-09-12T18:31:33.296Z,1568313093.296 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2019-09-12T18:31:33.330Z,1568313093.330 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2019-09-12T18:31:33.332Z,1568313093.332 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2019-09-12T18:31:33.334Z,1568313093.334 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2019-09-12T18:31:33.336Z,1568313093.336 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2019-09-12T18:31:33.338Z,1568313093.338 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2019-09-12T18:31:33.340Z,1568313093.340 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2019-09-12T18:31:33.342Z,1568313093.342 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2019-09-12T18:31:33.344Z,1568313093.344 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2019-09-12T18:31:33.346Z,1568313093.346 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2019-09-12T18:31:33.348Z,1568313093.348 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2019-09-12T18:31:33.363Z,1568313093.363 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2019-09-12T18:31:33.369Z,1568313093.369 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2019-09-12T18:31:33.372Z,1568313093.372 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2019-09-12T18:31:33.378Z,1568313093.378 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2019-09-12T18:31:33.385Z,1568313093.385 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2019-09-12T18:31:33.387Z,1568313093.387 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2019-09-12T18:31:33.394Z,1568313093.394 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2019-09-12T18:31:33.396Z,1568313093.396 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2019-09-12T18:31:33.403Z,1568313093.403 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2019-09-12T18:31:33.409Z,1568313093.409 [MissionManager](INFO): DefineArg Science.MedianFilterLen = 5.000000 count
2019-09-12T18:31:33.411Z,1568313093.411 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2019-09-12T18:31:33.414Z,1568313093.414 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2019-09-12T18:31:33.454Z,1568313093.454 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2019-09-12T18:31:33.473Z,1568313093.473 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2019-09-12T18:31:33.475Z,1568313093.475 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2019-09-12T18:31:33.486Z,1568313093.486 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2019-09-12T18:31:33.488Z,1568313093.488 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2019-09-12T18:31:33.507Z,1568313093.507 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2019-09-12T18:31:33.525Z,1568313093.525 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2019-09-12T18:31:33.527Z,1568313093.527 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2019-09-12T18:31:33.531Z,1568313093.531 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2019-09-12T18:31:33.542Z,1568313093.542 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2019-09-12T18:31:33.544Z,1568313093.544 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2019-09-12T18:31:33.558Z,1568313093.558 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2019-09-12T18:31:33.560Z,1568313093.560 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2019-09-12T18:31:33.571Z,1568313093.571 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2019-09-12T18:31:33.573Z,1568313093.573 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2019-09-12T18:31:33.575Z,1568313093.575 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2019-09-12T18:31:33.582Z,1568313093.582 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2019-09-12T18:31:33.590Z,1568313093.590 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2019-09-12T18:31:33.592Z,1568313093.592 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2019-09-12T18:31:33.598Z,1568313093.598 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2019-09-12T18:31:33.600Z,1568313093.600 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2019-09-12T18:31:33.607Z,1568313093.607 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2019-09-12T18:31:33.613Z,1568313093.613 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2019-09-12T18:31:33.615Z,1568313093.615 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2019-09-12T18:31:33.619Z,1568313093.619 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2019-09-12T18:31:33.654Z,1568313093.654 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:31:33.685Z,1568313093.685 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2019-09-12T18:31:33.695Z,1568313093.695 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:31:33.717Z,1568313093.717 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:31:33.757Z,1568313093.757 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:31:33.818Z,1568313093.818 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_chromophoric_dissolved_organic_matter_in_sea_water from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="MedianFilterLen"><Description>
        Median filter length (only for chlorophyll fluorescence which tends to have spikes)
    </Description><Units:count/><Value>5</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.medianFilterLength/><Arg Name="MedianFilterLen"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_chromophoric_dissolved_organic_matter_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2019-09-12T18:31:33.819Z,1568313093.819 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2019-09-12T18:31:33.881Z,1568313093.881 [Default] Stopped
2019-09-12T18:31:33.881Z,1568313093.881 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:31:33.881Z,1568313093.881 [Default:B.GoToSurface] Stopped
2019-09-12T18:31:33.881Z,1568313093.881 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:31:33.882Z,1568313093.882 [Default:CheckIn] Stopped
2019-09-12T18:31:33.882Z,1568313093.882 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:31:33.882Z,1568313093.882 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:31:33.882Z,1568313093.882 [MissionManager](IMPORTANT): Started mission Science
2019-09-12T18:31:33.882Z,1568313093.882 [Science] Running Loop=1
2019-09-12T18:31:33.882Z,1568313093.882 [Science](DEBUG): Aggregate::initialize Science
2019-09-12T18:31:33.882Z,1568313093.882 [Science:A] Running Loop=1
2019-09-12T18:31:33.882Z,1568313093.882 [Science:B] Running Loop=1
2019-09-12T18:31:33.882Z,1568313093.882 [Science:C] Running Loop=1
2019-09-12T18:31:33.882Z,1568313093.882 [Science:D] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:E] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:F] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:G] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:H] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:Read_Oil] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:PeakDetectChl] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2019-09-12T18:31:33.883Z,1568313093.883 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:31:33.883Z,1568313093.883 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:31:33.893Z,1568313093.893 [Science:HighestChlPeakReport] Running Loop=1
2019-09-12T18:31:33.893Z,1568313093.893 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2019-09-12T18:31:33.893Z,1568313093.893 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2019-09-12T18:31:33.893Z,1568313093.893 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2019-09-12T18:31:33.894Z,1568313093.894 [Science:PeakDetectNO3] Running Loop=1
2019-09-12T18:31:33.894Z,1568313093.894 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2019-09-12T18:31:33.894Z,1568313093.894 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:31:33.894Z,1568313093.894 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:31:33.895Z,1568313093.895 [Science:PeakDetectOil] Running Loop=1
2019-09-12T18:31:33.895Z,1568313093.895 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2019-09-12T18:31:33.895Z,1568313093.895 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:31:33.895Z,1568313093.895 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:31:33.905Z,1568313093.905 [Science:PeakDetectFDOM] Running Loop=1
2019-09-12T18:31:33.905Z,1568313093.905 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2019-09-12T18:31:33.905Z,1568313093.905 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:31:33.905Z,1568313093.905 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:31:33.907Z,1568313093.907 [Science:PeakDetectFDOM] Stopped
2019-09-12T18:31:33.907Z,1568313093.907 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2019-09-12T18:31:33.907Z,1568313093.907 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2019-09-12T18:31:33.907Z,1568313093.907 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:31:33.907Z,1568313093.907 [Science:PeakDetectOil] Stopped
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectNO3] Stopped
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2019-09-12T18:31:33.908Z,1568313093.908 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:31:33.908Z,1568313093.908 [Science:HighestChlPeakReport] Stopped
2019-09-12T18:31:33.908Z,1568313093.908 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2019-09-12T18:31:33.908Z,1568313093.908 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2019-09-12T18:31:33.917Z,1568313093.917 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2019-09-12T18:31:33.917Z,1568313093.917 [Science:PeakDetectChl] Stopped
2019-09-12T18:31:33.917Z,1568313093.917 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2019-09-12T18:31:33.917Z,1568313093.917 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2019-09-12T18:31:33.917Z,1568313093.917 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:31:33.917Z,1568313093.917 [Science:Read_Oil] Stopped
2019-09-12T18:31:33.917Z,1568313093.917 [Science:H] Stopped
2019-09-12T18:31:33.917Z,1568313093.917 [Science:G] Running Loop=1
2019-09-12T18:31:33.918Z,1568313093.918 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2019-09-12T18:31:33.918Z,1568313093.918 [Science:F] Stopped
2019-09-12T18:31:33.918Z,1568313093.918 [Science:E] Stopped
2019-09-12T18:31:33.918Z,1568313093.918 [Science:D] Running Loop=1
2019-09-12T18:31:33.919Z,1568313093.919 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2019-09-12T18:31:33.919Z,1568313093.919 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2019-09-12T18:31:33.919Z,1568313093.919 [Science:C] Running Loop=1
2019-09-12T18:31:33.920Z,1568313093.920 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2019-09-12T18:31:33.920Z,1568313093.920 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2019-09-12T18:31:33.920Z,1568313093.920 [Science:B] Stopped
2019-09-12T18:31:33.920Z,1568313093.920 [Science:A] Stopped
2019-09-12T18:31:33.954Z,1568313093.954 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2019-09-12T18:31:33.954Z,1568313093.954 [WetLabsBB2FL](INFO): Powering up
2019-09-12T18:31:34.768Z,1568313094.768 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:31:37.778Z,1568313097.778 [CTD_Seabird](ERROR): Failed to parse device response: <!--startlogging-->
2019-09-12T18:31:39.787Z,1568313099.787 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:31:40.791Z,1568313100.791 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:31:41.969Z,1568313101.969 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:31:42.799Z,1568313102.799 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:31:43.803Z,1568313103.803 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:31:43.962Z,1568313103.962 [BPC1](ERROR): BPC1A got IPBS message with 5 sticks (min is 7).
2019-09-12T18:31:44.843Z,1568313104.843 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:31:45.762Z,1568313105.762 [CommandLine](IMPORTANT): got command stop
2019-09-12T18:31:45.763Z,1568313105.763 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2019-09-12T18:31:46.012Z,1568313106.012 [MissionManager](INFO): MissionManager is completed.
2019-09-12T18:31:46.012Z,1568313106.012 [MissionManager](INFO): Uninitializing Mission Science
2019-09-12T18:31:46.012Z,1568313106.012 [Science] Stopped
2019-09-12T18:31:46.012Z,1568313106.012 [Science](DEBUG): Aggregate::uninitialize Science
2019-09-12T18:31:46.012Z,1568313106.012 [Science:C] Stopped
2019-09-12T18:31:46.012Z,1568313106.012 [Science:D] Stopped
2019-09-12T18:31:46.012Z,1568313106.012 [Science:G] Stopped
2019-09-12T18:31:46.078Z,1568313106.078 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:31:46.145Z,1568313106.145 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:31:46.405Z,1568313106.405 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:31:46.405Z,1568313106.405 [Default] Running Loop=1
2019-09-12T18:31:46.405Z,1568313106.405 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:31:46.405Z,1568313106.405 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:31:46.405Z,1568313106.405 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:31:46.405Z,1568313106.405 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:31:46.406Z,1568313106.406 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:31:46.406Z,1568313106.406 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:31:46.406Z,1568313106.406 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:31:46.407Z,1568313106.407 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:31:46.407Z,1568313106.407 [Default:A.Wait] Running Loop=1
2019-09-12T18:31:46.407Z,1568313106.407 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:31:48.442Z,1568313108.442 [BPC1](ERROR): BPC1B: No match for serial number 1717 in BPC1B's battery stick inventory (sticks 32-63 in onboard configuration file).
2019-09-12T18:31:59.751Z,1568313119.751 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:31:59.751Z,1568313119.751 [Default:A.Wait] Stopped
2019-09-12T18:31:59.751Z,1568313119.751 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:32:00.140Z,1568313120.140 [Default:CheckIn] Running Loop=1
2019-09-12T18:32:00.140Z,1568313120.140 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:32:00.140Z,1568313120.140 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:32:15.051Z,1568313135.051 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2019-09-12T18:32:15.877Z,1568313135.877 [NAL9602](DEBUG): Fix Requested
2019-09-12T18:32:16.277Z,1568313136.277 [NAL9602](DEBUG): Parsing RMC sentence: $GPRMC,182937.00,A,3648.16390,N,12147.27808,W,0.039,0.00,120919,,,A*72
2019-09-12T18:32:16.280Z,1568313136.280 [NAL9602](INFO): GPS fix at 20190912T182937: (36.802732, -121.787968)
2019-09-12T18:32:16.356Z,1568313136.356 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:32:16.361Z,1568313136.361 [Default:CheckIn:Read_Iridium] Running Loop=1
2019-09-12T18:32:16.741Z,1568313136.741 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2019-09-12T18:32:17.962Z,1568313137.962 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2019-09-12T18:32:17.963Z,1568313137.963 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2019-09-12T18:32:18.318Z,1568313138.318 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2019-09-12T18:32:18.320Z,1568313138.320 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2019-09-12T18:32:18.326Z,1568313138.326 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2019-09-12T18:32:18.328Z,1568313138.328 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2019-09-12T18:32:18.343Z,1568313138.343 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2019-09-12T18:32:18.357Z,1568313138.357 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2019-09-12T18:32:18.359Z,1568313138.359 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2019-09-12T18:32:18.369Z,1568313138.369 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2019-09-12T18:32:18.371Z,1568313138.371 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2019-09-12T18:32:18.381Z,1568313138.381 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2019-09-12T18:32:18.383Z,1568313138.383 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2019-09-12T18:32:18.401Z,1568313138.401 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2019-09-12T18:32:18.403Z,1568313138.403 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2019-09-12T18:32:18.421Z,1568313138.421 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2019-09-12T18:32:18.424Z,1568313138.424 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2019-09-12T18:32:18.434Z,1568313138.434 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2019-09-12T18:32:18.445Z,1568313138.445 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2019-09-12T18:32:18.447Z,1568313138.447 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2019-09-12T18:32:18.458Z,1568313138.458 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2019-09-12T18:32:18.460Z,1568313138.460 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2019-09-12T18:32:18.471Z,1568313138.471 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2019-09-12T18:32:18.477Z,1568313138.477 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2019-09-12T18:32:18.480Z,1568313138.480 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2019-09-12T18:32:18.482Z,1568313138.482 [MissionManager](INFO): DefineArg Science.MedianFilterLen = 5.000000 count
2019-09-12T18:32:18.484Z,1568313138.484 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2019-09-12T18:32:18.494Z,1568313138.494 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2019-09-12T18:32:18.496Z,1568313138.496 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2019-09-12T18:32:18.523Z,1568313138.523 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2019-09-12T18:32:18.556Z,1568313138.556 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2019-09-12T18:32:18.560Z,1568313138.560 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2019-09-12T18:32:18.586Z,1568313138.586 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2019-09-12T18:32:18.588Z,1568313138.588 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2019-09-12T18:32:18.591Z,1568313138.591 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2019-09-12T18:32:18.593Z,1568313138.593 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2019-09-12T18:32:18.596Z,1568313138.596 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2019-09-12T18:32:18.598Z,1568313138.598 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2019-09-12T18:32:18.600Z,1568313138.600 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2019-09-12T18:32:18.635Z,1568313138.635 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2019-09-12T18:32:18.637Z,1568313138.637 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2019-09-12T18:32:18.639Z,1568313138.639 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2019-09-12T18:32:18.661Z,1568313138.661 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2019-09-12T18:32:18.663Z,1568313138.663 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2019-09-12T18:32:18.666Z,1568313138.666 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2019-09-12T18:32:18.668Z,1568313138.668 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2019-09-12T18:32:18.704Z,1568313138.704 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2019-09-12T18:32:18.706Z,1568313138.706 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2019-09-12T18:32:18.708Z,1568313138.708 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2019-09-12T18:32:18.742Z,1568313138.742 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2019-09-12T18:32:18.744Z,1568313138.744 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2019-09-12T18:32:18.750Z,1568313138.750 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2019-09-12T18:32:18.761Z,1568313138.761 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2019-09-12T18:32:18.796Z,1568313138.796 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:32:18.839Z,1568313138.839 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2019-09-12T18:32:18.863Z,1568313138.863 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:32:18.901Z,1568313138.901 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:32:18.930Z,1568313138.930 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:32:19.002Z,1568313139.002 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_chromophoric_dissolved_organic_matter_in_sea_water from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="MedianFilterLen"><Description>
        Median filter length (only for chlorophyll fluorescence which tends to have spikes)
    </Description><Units:count/><Value>5</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.medianFilterLength/><Arg Name="MedianFilterLen"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_chromophoric_dissolved_organic_matter_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2019-09-12T18:32:19.004Z,1568313139.004 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2019-09-12T18:32:19.165Z,1568313139.165 [Default] Stopped
2019-09-12T18:32:19.165Z,1568313139.165 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:32:19.165Z,1568313139.165 [Default:B.GoToSurface] Stopped
2019-09-12T18:32:19.165Z,1568313139.165 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:32:19.165Z,1568313139.165 [Default:CheckIn] Stopped
2019-09-12T18:32:19.165Z,1568313139.165 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:32:19.165Z,1568313139.165 [Default:CheckIn:Read_Iridium] Stopped
2019-09-12T18:32:19.165Z,1568313139.165 [MissionManager](IMPORTANT): Started mission Science
2019-09-12T18:32:19.166Z,1568313139.166 [Science] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science](DEBUG): Aggregate::initialize Science
2019-09-12T18:32:19.166Z,1568313139.166 [Science:A] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:B] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:C] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:D] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:E] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:F] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:G] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:H] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:Read_Oil] Running Loop=1
2019-09-12T18:32:19.166Z,1568313139.166 [Science:PeakDetectChl] Running Loop=1
2019-09-12T18:32:19.167Z,1568313139.167 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2019-09-12T18:32:19.167Z,1568313139.167 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:32:19.167Z,1568313139.167 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:32:19.168Z,1568313139.168 [Science:HighestChlPeakReport] Running Loop=1
2019-09-12T18:32:19.168Z,1568313139.168 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2019-09-12T18:32:19.168Z,1568313139.168 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2019-09-12T18:32:19.181Z,1568313139.181 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2019-09-12T18:32:19.181Z,1568313139.181 [Science:PeakDetectNO3] Running Loop=1
2019-09-12T18:32:19.181Z,1568313139.181 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2019-09-12T18:32:19.181Z,1568313139.181 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:32:19.182Z,1568313139.182 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:32:19.183Z,1568313139.183 [Science:PeakDetectOil] Running Loop=1
2019-09-12T18:32:19.183Z,1568313139.183 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2019-09-12T18:32:19.183Z,1568313139.183 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:32:19.183Z,1568313139.183 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:32:19.197Z,1568313139.197 [Science:PeakDetectFDOM] Running Loop=1
2019-09-12T18:32:19.197Z,1568313139.197 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2019-09-12T18:32:19.197Z,1568313139.197 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:32:19.197Z,1568313139.197 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:32:19.199Z,1568313139.199 [Science:PeakDetectFDOM] Stopped
2019-09-12T18:32:19.199Z,1568313139.199 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2019-09-12T18:32:19.199Z,1568313139.199 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2019-09-12T18:32:19.199Z,1568313139.199 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectOil] Stopped
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectNO3] Stopped
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2019-09-12T18:32:19.200Z,1568313139.200 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:32:19.200Z,1568313139.200 [Science:HighestChlPeakReport] Stopped
2019-09-12T18:32:19.200Z,1568313139.200 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2019-09-12T18:32:19.209Z,1568313139.209 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2019-09-12T18:32:19.209Z,1568313139.209 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2019-09-12T18:32:19.209Z,1568313139.209 [Science:PeakDetectChl] Stopped
2019-09-12T18:32:19.209Z,1568313139.209 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2019-09-12T18:32:19.209Z,1568313139.209 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2019-09-12T18:32:19.209Z,1568313139.209 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:32:19.209Z,1568313139.209 [Science:Read_Oil] Stopped
2019-09-12T18:32:19.209Z,1568313139.209 [Science:H] Stopped
2019-09-12T18:32:19.209Z,1568313139.209 [Science:G] Running Loop=1
2019-09-12T18:32:19.210Z,1568313139.210 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2019-09-12T18:32:19.210Z,1568313139.210 [Science:F] Stopped
2019-09-12T18:32:19.210Z,1568313139.210 [Science:E] Stopped
2019-09-12T18:32:19.210Z,1568313139.210 [Science:D] Running Loop=1
2019-09-12T18:32:19.211Z,1568313139.211 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2019-09-12T18:32:19.211Z,1568313139.211 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2019-09-12T18:32:19.211Z,1568313139.211 [Science:C] Running Loop=1
2019-09-12T18:32:19.212Z,1568313139.212 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2019-09-12T18:32:19.212Z,1568313139.212 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2019-09-12T18:32:19.212Z,1568313139.212 [Science:B] Stopped
2019-09-12T18:32:19.212Z,1568313139.212 [Science:A] Stopped
2019-09-12T18:32:19.337Z,1568313139.337 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2019-09-12T18:32:19.345Z,1568313139.345 [WetLabsBB2FL](INFO): Powering up
2019-09-12T18:32:19.950Z,1568313139.950 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:32:22.962Z,1568313142.962 [CTD_Seabird](ERROR): Failed to parse device response: <!--startlogging-->
2019-09-12T18:32:23.968Z,1568313143.968 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:24.971Z,1568313144.971 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:25.976Z,1568313145.976 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:26.979Z,1568313146.979 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:27.976Z,1568313147.976 [DataOverHttps](INFO): Sending 212 bytes from file Logs/20190912T182623/Courier0004.lzma
2019-09-12T18:32:28.064Z,1568313148.064 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:29.982Z,1568313149.982 [DataOverHttps](INFO): Moved sent file to Logs/20190912T182623/Courier0004.lzma.bak
2019-09-12T18:32:29.982Z,1568313149.982 [DataOverHttps](INFO): SBD MOMSN=11776335
2019-09-12T18:32:30.075Z,1568313150.075 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:31.999Z,1568313151.999 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:33.003Z,1568313153.003 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:34.007Z,1568313154.007 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:35.381Z,1568313155.381 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:36.156Z,1568313156.156 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:37.359Z,1568313157.359 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:38.023Z,1568313158.023 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:39.027Z,1568313159.027 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:40.031Z,1568313160.031 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:41.035Z,1568313161.035 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:42.170Z,1568313162.170 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:43.053Z,1568313163.053 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:44.047Z,1568313164.047 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:45.482Z,1568313165.482 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:46.055Z,1568313166.055 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:47.094Z,1568313167.094 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:48.194Z,1568313168.194 [NAL9602](INFO): Not Powering down - fast GPS
2019-09-12T18:32:48.273Z,1568313168.273 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:49.084Z,1568313169.084 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:50.071Z,1568313170.071 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:51.080Z,1568313171.080 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:52.283Z,1568313172.283 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:53.174Z,1568313173.174 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:54.087Z,1568313174.087 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:55.091Z,1568313175.091 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:56.095Z,1568313176.095 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:57.099Z,1568313177.099 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:32:58.342Z,1568313178.342 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:59.136Z,1568313179.136 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:32:59.512Z,1568313179.512 [DVL_micro](ERROR): only read 0 of 1 data item for BIT error
2019-09-12T18:32:59.513Z,1568313179.513 [DVL_micro](ERROR): Failed to parse:
:TS,00000000000000,35.0,+19.4,0000.0,14
2019-09-12T18:33:00.111Z,1568313180.111 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:33:01.115Z,1568313181.115 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:33:02.390Z,1568313182.390 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:33:02.601Z,1568313182.601 [CommandLine](IMPORTANT): got command stop
2019-09-12T18:33:02.602Z,1568313182.602 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2019-09-12T18:33:02.779Z,1568313182.779 [MissionManager](INFO): MissionManager is completed.
2019-09-12T18:33:02.779Z,1568313182.779 [MissionManager](INFO): Uninitializing Mission Science
2019-09-12T18:33:02.779Z,1568313182.779 [Science] Stopped
2019-09-12T18:33:02.780Z,1568313182.780 [Science](DEBUG): Aggregate::uninitialize Science
2019-09-12T18:33:02.780Z,1568313182.780 [Science:C] Stopped
2019-09-12T18:33:02.780Z,1568313182.780 [Science:D] Stopped
2019-09-12T18:33:02.780Z,1568313182.780 [Science:G] Stopped
2019-09-12T18:33:03.177Z,1568313183.177 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:33:03.177Z,1568313183.177 [Default] Running Loop=1
2019-09-12T18:33:03.177Z,1568313183.177 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:33:03.177Z,1568313183.177 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:33:03.177Z,1568313183.177 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:33:03.178Z,1568313183.178 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:33:03.178Z,1568313183.178 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:33:03.178Z,1568313183.178 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:33:03.178Z,1568313183.178 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:33:03.179Z,1568313183.179 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:33:03.179Z,1568313183.179 [Default:A.Wait] Running Loop=1
2019-09-12T18:33:03.180Z,1568313183.180 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:33:03.285Z,1568313183.285 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:33:10.233Z,1568313190.233 [CommandLine](IMPORTANT): got command show variable salinity
2019-09-12T18:33:10.240Z,1568313190.240 [CommandLine](IMPORTANT): sea_water_salinity (unknown)
2019-09-12T18:33:10.310Z,1568313190.310 [CommandLine](IMPORTANT): CTD_NeilBrown.maxSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.310Z,1568313190.310 [CommandLine](IMPORTANT): CTD_NeilBrown.minSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.311Z,1568313190.311 [CommandLine](IMPORTANT): CTD_Seabird.maxSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.311Z,1568313190.311 [CommandLine](IMPORTANT): CTD_Seabird.minSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.313Z,1568313190.313 [CommandLine](IMPORTANT): CTD_SeabirdLCM.maxSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.313Z,1568313190.313 [CommandLine](IMPORTANT): CTD_SeabirdLCM.minSalinityBound (practical_salinity_unit)
2019-09-12T18:33:10.683Z,1568313190.683 [CommandLine](IMPORTANT): CTD_Seabird.sea_water_salinity (practical_salinity_unit)
2019-09-12T18:33:10.702Z,1568313190.702 [CommandLine](IMPORTANT): CTD_Seabird.bin_median_sea_water_salinity (practical_salinity_unit)
2019-09-12T18:33:10.702Z,1568313190.702 [CommandLine](IMPORTANT): CTD_Seabird.bin_mean_sea_water_salinity (practical_salinity_unit)
2019-09-12T18:33:10.703Z,1568313190.703 [CommandLine](IMPORTANT): CTD_Seabird.bin_standard_deviation_sea_water_salinity (practical_salinity_unit)
2019-09-12T18:33:16.515Z,1568313196.515 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:33:16.515Z,1568313196.515 [Default:A.Wait] Stopped
2019-09-12T18:33:16.515Z,1568313196.515 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:33:16.927Z,1568313196.927 [Default:CheckIn] Running Loop=1
2019-09-12T18:33:16.927Z,1568313196.927 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:33:16.927Z,1568313196.927 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:33:18.505Z,1568313198.505 [NAL9602](DEBUG): Fix Requested
2019-09-12T18:33:18.896Z,1568313198.896 [NAL9602](DEBUG): Parsing RMC sentence: $GPRMC,183040.00,A,3648.16368,N,12147.27896,W,0.797,123.84,120919,,,A*75
2019-09-12T18:33:18.898Z,1568313198.898 [NAL9602](INFO): GPS fix at 20190912T183040: (36.802728, -121.787983)
2019-09-12T18:33:18.923Z,1568313198.923 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:33:18.923Z,1568313198.923 [Default:CheckIn:Read_Iridium] Running Loop=1
2019-09-12T18:33:20.935Z,1568313200.935 [CommandLine](IMPORTANT): got command get CTD_NeilBrown.loadAtStartup
2019-09-12T18:33:20.936Z,1568313200.936 [CommandLine](IMPORTANT): CTD_NeilBrown.loadAtStartup 0 bool
2019-09-12T18:33:23.901Z,1568313203.901 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2019-09-12T18:33:27.364Z,1568313207.364 [DataOverHttps](INFO): Sending 61 bytes from file Logs/20190912T182623/Courier0007.lzma
2019-09-12T18:33:28.366Z,1568313208.366 [CommandLine](IMPORTANT): got command report touch sea_water_salinity
2019-09-12T18:33:29.346Z,1568313209.346 [DataOverHttps](INFO): Moved sent file to Logs/20190912T182623/Courier0007.lzma.bak
2019-09-12T18:33:29.346Z,1568313209.346 [DataOverHttps](INFO): SBD MOMSN=11776339
2019-09-12T18:33:49.611Z,1568313229.611 [NAL9602](ERROR): Failed to receive proper response when querying signal strength for MT queue check.
2019-09-12T18:33:49.689Z,1568313229.689 [NAL9602](FAULT): received: 
+CSQ:0

OK
2019-09-12T18:33:49.689Z,1568313229.689 [NAL9602] Data Fault, FailCount= 1
2019-09-12T18:33:49.689Z,1568313229.689 [NAL9602](ERROR): Data Fault
2019-09-12T18:33:49.788Z,1568313229.788 [CBIT](ERROR): Data Fault in component: NAL9602
2019-09-12T18:33:50.020Z,1568313230.020 [NAL9602](INFO): Powering down
2019-09-12T18:33:50.925Z,1568313230.925 [CBIT](INFO): Clearing failed state for component NAL9602
2019-09-12T18:33:50.925Z,1568313230.925 [NAL9602] No Fault, FailCount= 1
2019-09-12T18:33:54.045Z,1568313234.045 [DataOverHttps](INFO): Sending 654 bytes from file Logs/20190912T182623/Express0001.lzma
2019-09-12T18:33:56.050Z,1568313236.050 [DataOverHttps](INFO): Moved sent file to Logs/20190912T182623/Express0001.lzma.bak
2019-09-12T18:33:56.050Z,1568313236.050 [DataOverHttps](INFO): SBD MOMSN=11776342
2019-09-12T18:34:08.052Z,1568313248.052 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2019-09-12T18:34:08.052Z,1568313248.052 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2019-09-12T18:34:08.201Z,1568313248.201 [DVL_micro](ERROR): Failed to parse:
:R99,+9999.99,+99999.99
2019-09-12T18:34:08.328Z,1568313248.328 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2019-09-12T18:34:08.330Z,1568313248.330 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2019-09-12T18:34:08.332Z,1568313248.332 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2019-09-12T18:34:08.334Z,1568313248.334 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2019-09-12T18:34:08.336Z,1568313248.336 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2019-09-12T18:34:08.338Z,1568313248.338 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2019-09-12T18:34:08.340Z,1568313248.340 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2019-09-12T18:34:08.342Z,1568313248.342 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2019-09-12T18:34:08.344Z,1568313248.344 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2019-09-12T18:34:08.347Z,1568313248.347 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2019-09-12T18:34:08.349Z,1568313248.349 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2019-09-12T18:34:08.350Z,1568313248.350 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2019-09-12T18:34:08.352Z,1568313248.352 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2019-09-12T18:34:08.354Z,1568313248.354 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2019-09-12T18:34:08.357Z,1568313248.357 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2019-09-12T18:34:08.359Z,1568313248.359 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2019-09-12T18:34:08.362Z,1568313248.362 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2019-09-12T18:34:08.364Z,1568313248.364 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2019-09-12T18:34:08.366Z,1568313248.366 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2019-09-12T18:34:08.403Z,1568313248.403 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2019-09-12T18:34:08.409Z,1568313248.409 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2019-09-12T18:34:08.412Z,1568313248.412 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2019-09-12T18:34:08.418Z,1568313248.418 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2019-09-12T18:34:08.420Z,1568313248.420 [MissionManager](INFO): DefineArg Science.MedianFilterLen = 5.000000 count
2019-09-12T18:34:08.434Z,1568313248.434 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2019-09-12T18:34:08.439Z,1568313248.439 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2019-09-12T18:34:08.451Z,1568313248.451 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2019-09-12T18:34:08.456Z,1568313248.456 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2019-09-12T18:34:08.466Z,1568313248.466 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2019-09-12T18:34:08.483Z,1568313248.483 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2019-09-12T18:34:08.489Z,1568313248.489 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2019-09-12T18:34:08.492Z,1568313248.492 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2019-09-12T18:34:08.502Z,1568313248.502 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2019-09-12T18:34:08.513Z,1568313248.513 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2019-09-12T18:34:08.518Z,1568313248.518 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2019-09-12T18:34:08.520Z,1568313248.520 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2019-09-12T18:34:08.527Z,1568313248.527 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2019-09-12T18:34:08.537Z,1568313248.537 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2019-09-12T18:34:08.540Z,1568313248.540 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2019-09-12T18:34:08.550Z,1568313248.550 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2019-09-12T18:34:08.552Z,1568313248.552 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2019-09-12T18:34:08.566Z,1568313248.566 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2019-09-12T18:34:08.568Z,1568313248.568 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2019-09-12T18:34:08.574Z,1568313248.574 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2019-09-12T18:34:08.598Z,1568313248.598 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2019-09-12T18:34:08.618Z,1568313248.618 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2019-09-12T18:34:08.620Z,1568313248.620 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2019-09-12T18:34:08.623Z,1568313248.623 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2019-09-12T18:34:08.637Z,1568313248.637 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2019-09-12T18:34:08.646Z,1568313248.646 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2019-09-12T18:34:08.648Z,1568313248.648 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2019-09-12T18:34:08.688Z,1568313248.688 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:08.718Z,1568313248.718 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2019-09-12T18:34:08.730Z,1568313248.730 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:08.752Z,1568313248.752 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:08.765Z,1568313248.765 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:08.863Z,1568313248.863 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_chromophoric_dissolved_organic_matter_in_sea_water from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="MedianFilterLen"><Description>
        Median filter length (only for chlorophyll fluorescence which tends to have spikes)
    </Description><Units:count/><Value>5</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.medianFilterLength/><Arg Name="MedianFilterLen"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_chromophoric_dissolved_organic_matter_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2019-09-12T18:34:08.893Z,1568313248.893 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2019-09-12T18:34:09.026Z,1568313249.026 [Default] Stopped
2019-09-12T18:34:09.026Z,1568313249.026 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:34:09.026Z,1568313249.026 [Default:B.GoToSurface] Stopped
2019-09-12T18:34:09.026Z,1568313249.026 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:34:09.026Z,1568313249.026 [Default:CheckIn] Stopped
2019-09-12T18:34:09.026Z,1568313249.026 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:34:09.026Z,1568313249.026 [Default:CheckIn:Read_Iridium] Stopped
2019-09-12T18:34:09.026Z,1568313249.026 [MissionManager](IMPORTANT): Started mission Science
2019-09-12T18:34:09.026Z,1568313249.026 [Science] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science](DEBUG): Aggregate::initialize Science
2019-09-12T18:34:09.027Z,1568313249.027 [Science:A] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:B] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:C] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:D] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:E] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:F] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:G] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:H] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:Read_Oil] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:PeakDetectChl] Running Loop=1
2019-09-12T18:34:09.027Z,1568313249.027 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2019-09-12T18:34:09.028Z,1568313249.028 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:09.028Z,1568313249.028 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:09.031Z,1568313249.031 [Science:HighestChlPeakReport] Running Loop=1
2019-09-12T18:34:09.031Z,1568313249.031 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2019-09-12T18:34:09.031Z,1568313249.031 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2019-09-12T18:34:09.031Z,1568313249.031 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2019-09-12T18:34:09.032Z,1568313249.032 [Science:PeakDetectNO3] Running Loop=1
2019-09-12T18:34:09.032Z,1568313249.032 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2019-09-12T18:34:09.032Z,1568313249.032 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:09.032Z,1568313249.032 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:09.033Z,1568313249.033 [Science:PeakDetectOil] Running Loop=1
2019-09-12T18:34:09.034Z,1568313249.034 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2019-09-12T18:34:09.034Z,1568313249.034 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:09.034Z,1568313249.034 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:09.035Z,1568313249.035 [Science:PeakDetectFDOM] Running Loop=1
2019-09-12T18:34:09.035Z,1568313249.035 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2019-09-12T18:34:09.035Z,1568313249.035 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:09.035Z,1568313249.035 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:09.037Z,1568313249.037 [Science:PeakDetectFDOM] Stopped
2019-09-12T18:34:09.037Z,1568313249.037 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2019-09-12T18:34:09.037Z,1568313249.037 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:09.037Z,1568313249.037 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectOil] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectNO3] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:09.038Z,1568313249.038 [Science:HighestChlPeakReport] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2019-09-12T18:34:09.038Z,1568313249.038 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2019-09-12T18:34:09.038Z,1568313249.038 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2019-09-12T18:34:09.038Z,1568313249.038 [Science:PeakDetectChl] Stopped
2019-09-12T18:34:09.039Z,1568313249.039 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2019-09-12T18:34:09.039Z,1568313249.039 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:09.039Z,1568313249.039 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:09.039Z,1568313249.039 [Science:Read_Oil] Stopped
2019-09-12T18:34:09.039Z,1568313249.039 [Science:H] Stopped
2019-09-12T18:34:09.039Z,1568313249.039 [Science:G] Running Loop=1
2019-09-12T18:34:09.039Z,1568313249.039 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2019-09-12T18:34:09.040Z,1568313249.040 [Science:F] Stopped
2019-09-12T18:34:09.040Z,1568313249.040 [Science:E] Stopped
2019-09-12T18:34:09.040Z,1568313249.040 [Science:D] Running Loop=1
2019-09-12T18:34:09.040Z,1568313249.040 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2019-09-12T18:34:09.057Z,1568313249.057 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2019-09-12T18:34:09.057Z,1568313249.057 [Science:C] Running Loop=1
2019-09-12T18:34:09.057Z,1568313249.057 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2019-09-12T18:34:09.058Z,1568313249.058 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2019-09-12T18:34:09.058Z,1568313249.058 [Science:B] Stopped
2019-09-12T18:34:09.058Z,1568313249.058 [Science:A] Stopped
2019-09-12T18:34:09.238Z,1568313249.238 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2019-09-12T18:34:09.238Z,1568313249.238 [WetLabsBB2FL](INFO): Powering up
2019-09-12T18:34:09.410Z,1568313249.410 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:34:12.422Z,1568313252.422 [CTD_Seabird](ERROR): Failed to parse device response: <!--startlogging-->
2019-09-12T18:34:14.431Z,1568313254.431 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:34:15.306Z,1568313255.306 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:34:15.435Z,1568313255.435 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:34:16.766Z,1568313256.766 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:16.766Z,1568313256.766 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:17.443Z,1568313257.443 [CTD_Seabird](ERROR): Salinity reading out of range: 0.000000 psu
2019-09-12T18:34:18.799Z,1568313258.799 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:18.800Z,1568313258.800 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:19.547Z,1568313259.547 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:19.547Z,1568313259.547 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:19.902Z,1568313259.902 [DataOverHttps](INFO): Sending 815 bytes from file Logs/20190912T182623/Express0005.lzma
2019-09-12T18:34:20.308Z,1568313260.308 [NAL9602](INFO): Powering up NAL9602
2019-09-12T18:34:20.794Z,1568313260.794 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:20.795Z,1568313260.795 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:21.568Z,1568313261.568 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:21.573Z,1568313261.573 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:21.906Z,1568313261.906 [DataOverHttps](INFO): Moved sent file to Logs/20190912T182623/Express0005.lzma.bak
2019-09-12T18:34:21.906Z,1568313261.906 [DataOverHttps](INFO): SBD MOMSN=11776357
2019-09-12T18:34:22.781Z,1568313262.781 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:22.782Z,1568313262.782 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:23.610Z,1568313263.610 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:23.610Z,1568313263.610 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:24.654Z,1568313264.654 [CommandLine](IMPORTANT): got command stop
2019-09-12T18:34:24.655Z,1568313264.655 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2019-09-12T18:34:24.800Z,1568313264.800 [MissionManager](INFO): MissionManager is completed.
2019-09-12T18:34:24.800Z,1568313264.800 [MissionManager](INFO): Uninitializing Mission Science
2019-09-12T18:34:24.800Z,1568313264.800 [Science] Stopped
2019-09-12T18:34:24.805Z,1568313264.805 [Science](DEBUG): Aggregate::uninitialize Science
2019-09-12T18:34:24.805Z,1568313264.805 [Science:C] Stopped
2019-09-12T18:34:24.805Z,1568313264.805 [Science:D] Stopped
2019-09-12T18:34:24.805Z,1568313264.805 [Science:G] Stopped
2019-09-12T18:34:24.904Z,1568313264.904 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water nan ug/l
2019-09-12T18:34:24.913Z,1568313264.913 [Reporter](INFO): sea_water_salinity nan psu
2019-09-12T18:34:24.969Z,1568313264.969 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:34:25.213Z,1568313265.213 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:34:25.213Z,1568313265.213 [Default] Running Loop=1
2019-09-12T18:34:25.213Z,1568313265.213 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:34:25.213Z,1568313265.213 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:34:25.213Z,1568313265.213 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:34:25.214Z,1568313265.214 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:34:25.214Z,1568313265.214 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:34:25.214Z,1568313265.214 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:34:25.214Z,1568313265.214 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:34:25.215Z,1568313265.215 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:34:25.215Z,1568313265.215 [Default:A.Wait] Running Loop=1
2019-09-12T18:34:25.215Z,1568313265.215 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:34:31.235Z,1568313271.235 [NAL9602](INFO): NAL9602 initialized
2019-09-12T18:34:31.394Z,1568313271.394 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2019-09-12T18:34:38.551Z,1568313278.551 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:34:38.551Z,1568313278.551 [Default:A.Wait] Stopped
2019-09-12T18:34:38.551Z,1568313278.551 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:34:38.967Z,1568313278.967 [Default:CheckIn] Running Loop=1
2019-09-12T18:34:38.967Z,1568313278.967 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:34:38.967Z,1568313278.967 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:34:40.529Z,1568313280.529 [NAL9602](DEBUG): Fix Requested
2019-09-12T18:34:43.125Z,1568313283.125 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2019-09-12T18:34:43.126Z,1568313283.126 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2019-09-12T18:34:43.529Z,1568313283.529 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2019-09-12T18:34:43.531Z,1568313283.531 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2019-09-12T18:34:43.533Z,1568313283.533 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2019-09-12T18:34:43.535Z,1568313283.535 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2019-09-12T18:34:43.537Z,1568313283.537 [MissionManager](INFO): DefineArg Science.TimeWindowPeakReport = nan min
2019-09-12T18:34:43.539Z,1568313283.539 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2019-09-12T18:34:43.541Z,1568313283.541 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2019-09-12T18:34:43.543Z,1568313283.543 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2019-09-12T18:34:43.545Z,1568313283.545 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2019-09-12T18:34:43.547Z,1568313283.547 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2019-09-12T18:34:43.549Z,1568313283.549 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2019-09-12T18:34:43.551Z,1568313283.551 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2019-09-12T18:34:43.553Z,1568313283.553 [MissionManager](INFO): DefineArg Science.PeakDetectFDOMActive = 0 bool
2019-09-12T18:34:43.555Z,1568313283.555 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2019-09-12T18:34:43.558Z,1568313283.558 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2019-09-12T18:34:43.560Z,1568313283.560 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2019-09-12T18:34:43.563Z,1568313283.563 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 1.000000 bool
2019-09-12T18:34:43.565Z,1568313283.565 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2019-09-12T18:34:43.567Z,1568313283.567 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2019-09-12T18:34:43.570Z,1568313283.570 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2019-09-12T18:34:43.572Z,1568313283.572 [MissionManager](INFO): DefineArg Science.EnabledWetLabsUBAT = 0.000000 bool
2019-09-12T18:34:43.600Z,1568313283.600 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2019-09-12T18:34:43.608Z,1568313283.608 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2019-09-12T18:34:43.619Z,1568313283.619 [MissionManager](INFO): DefineArg Science.MedianFilterLen = 5.000000 count
2019-09-12T18:34:43.625Z,1568313283.625 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2019-09-12T18:34:43.627Z,1568313283.627 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2019-09-12T18:34:43.633Z,1568313283.633 [MissionManager](INFO): DefineArg Science.PeakShallowBound = nan m
2019-09-12T18:34:43.635Z,1568313283.635 [MissionManager](INFO): DefineArg Science.PeakDeepBound = nan m
2019-09-12T18:34:43.642Z,1568313283.642 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2019-09-12T18:34:43.644Z,1568313283.644 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2019-09-12T18:34:43.650Z,1568313283.650 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2019-09-12T18:34:43.657Z,1568313283.657 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2019-09-12T18:34:43.659Z,1568313283.659 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2019-09-12T18:34:43.666Z,1568313283.666 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2019-09-12T18:34:43.668Z,1568313283.668 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2019-09-12T18:34:43.674Z,1568313283.674 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2019-09-12T18:34:43.677Z,1568313283.677 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2019-09-12T18:34:43.679Z,1568313283.679 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2019-09-12T18:34:43.690Z,1568313283.690 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2019-09-12T18:34:43.692Z,1568313283.692 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2019-09-12T18:34:43.698Z,1568313283.698 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2019-09-12T18:34:43.705Z,1568313283.705 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2019-09-12T18:34:43.707Z,1568313283.707 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2019-09-12T18:34:43.709Z,1568313283.709 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2019-09-12T18:34:43.712Z,1568313283.712 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2019-09-12T18:34:43.722Z,1568313283.722 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2019-09-12T18:34:43.724Z,1568313283.724 [MissionManager](INFO): DefineOutput Science.PeakFDOM = 0.000000 ppb
2019-09-12T18:34:43.778Z,1568313283.778 [MissionManager](INFO): DefineOutput Science.PeakFDOMDepth = 0.000000 m
2019-09-12T18:34:43.793Z,1568313283.793 [MissionManager](INFO): DefineOutput Science.PeakFDOMLatitude = nan arcdeg
2019-09-12T18:34:43.795Z,1568313283.795 [MissionManager](INFO): DefineOutput Science.PeakFDOMLongitude = nan arcdeg
2019-09-12T18:34:43.805Z,1568313283.805 [MissionManager](INFO): DefineOutput Science.PatchFDOMDistance = nan m
2019-09-12T18:34:43.863Z,1568313283.863 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:43.903Z,1568313283.903 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2019-09-12T18:34:43.934Z,1568313283.934 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:43.967Z,1568313283.967 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:43.976Z,1568313283.976 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2019-09-12T18:34:44.026Z,1568313284.026 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="TimeWindowPeakReport"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

<!--debug
    </Description><True/></DefineArg>
-->

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectFDOMActive"><Description>
        Turns on peak detection of concentration_of_chromophoric_dissolved_organic_matter_in_sea_water from FDOM sensor.
    </Description><False/></DefineArg>
    
    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsUBAT"><Description>
        Automatically set to true if the the WetLabs UBAT is enabled. Set
        to false to disable the WetLabs UBAT.
    </Description><Science:WetLabsUBAT.loadAtStartup/></DefineArg>    

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="MedianFilterLen"><Description>
        Median filter length (only for chlorophyll fluorescence which tends to have spikes)
    </Description><Units:count/><Value>5</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>10</Value></DefineArg>
-->

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:meter/><Value>20</Value></DefineArg>
-->

    <DefineArg Name="PeakShallowBound"><Description>
        Shallow depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakDeepBound"><Description>
        Deep depth bound for detecting any peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOM"><Units:part_per_billion/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
    
    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>NaN</Value></DefineOutput>    
    
    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And><Universal:platform_pitch_angle/><Lt><Arg Name="SampleISUSmaxPitch"/></Lt><And><Universal:platform_pitch_angle/><Gt><Arg Name="SampleISUSminPitch"/></Gt><And><Arg Name="SampleISUS"/><Or><Arg Name="PeakDetectNO3Active"/></Or></And></And></And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or><Arg Name="EnabledSeabird"/></Or>
            <And><Arg Name="UpwardDerivativeOfTemperatureActive"/></And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or><Arg Name="PeakDetectChlActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsUBAT"/>
        </While>
        <Science:WetLabsUBAT.biolum_potential/>
    </ReadData>

<!--debug-->

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or><Arg Name="PeakDetectOilActive"/></Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">

        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.medianFilterLength/><Arg Name="MedianFilterLen"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
-->

        <SendData Service="Express"><Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">

        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>

    </Aggregate>

    <Aggregate Id="PeakDetectNO3">

        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectOil">

        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>

    </Aggregate>

    <Aggregate Id="PeakDetectFDOM">

        <While>
            <Arg Name="PeakDetectFDOMActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:concentration_of_chromophoric_dissolved_organic_matter_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.timeWindowPeakReport/><Arg Name="TimeWindowPeakReport"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakDeepBound"/></Setting>
            <OutputArg Name="PeakFDOM"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakFDOMDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakFDOMTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakFDOMLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakFDOMLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express"><Arg Name="PeakFDOM"/><Arg Name="PeakFDOMDepth"/>
        </SendData>

    </Aggregate>

</Aggregate>


2019-09-12T18:34:44.028Z,1568313284.028 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2019-09-12T18:34:44.222Z,1568313284.222 [Default] Stopped
2019-09-12T18:34:44.222Z,1568313284.222 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:34:44.222Z,1568313284.222 [Default:B.GoToSurface] Stopped
2019-09-12T18:34:44.222Z,1568313284.222 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:34:44.222Z,1568313284.222 [Default:CheckIn] Stopped
2019-09-12T18:34:44.222Z,1568313284.222 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:34:44.222Z,1568313284.222 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:34:44.222Z,1568313284.222 [MissionManager](IMPORTANT): Started mission Science
2019-09-12T18:34:44.222Z,1568313284.222 [Science] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science](DEBUG): Aggregate::initialize Science
2019-09-12T18:34:44.223Z,1568313284.223 [Science:A] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:B] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:C] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:D] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:E] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:F] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:G] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:H] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:Read_Oil] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:PeakDetectChl] Running Loop=1
2019-09-12T18:34:44.223Z,1568313284.223 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2019-09-12T18:34:44.224Z,1568313284.224 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:44.224Z,1568313284.224 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:44.229Z,1568313284.229 [Science:HighestChlPeakReport] Running Loop=1
2019-09-12T18:34:44.229Z,1568313284.229 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2019-09-12T18:34:44.230Z,1568313284.230 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2019-09-12T18:34:44.230Z,1568313284.230 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2019-09-12T18:34:44.230Z,1568313284.230 [Science:PeakDetectNO3] Running Loop=1
2019-09-12T18:34:44.230Z,1568313284.230 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2019-09-12T18:34:44.230Z,1568313284.230 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:44.230Z,1568313284.230 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:44.231Z,1568313284.231 [Science:PeakDetectOil] Running Loop=1
2019-09-12T18:34:44.232Z,1568313284.232 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2019-09-12T18:34:44.232Z,1568313284.232 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:44.232Z,1568313284.232 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:44.245Z,1568313284.245 [Science:PeakDetectFDOM] Running Loop=1
2019-09-12T18:34:44.245Z,1568313284.245 [Science:PeakDetectFDOM](DEBUG): Aggregate::initialize Science:PeakDetectFDOM
2019-09-12T18:34:44.245Z,1568313284.245 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2019-09-12T18:34:44.245Z,1568313284.245 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2019-09-12T18:34:44.247Z,1568313284.247 [Science:PeakDetectFDOM] Stopped
2019-09-12T18:34:44.247Z,1568313284.247 [Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize Science:PeakDetectFDOM
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectOil] Stopped
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectNO3] Stopped
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:44.248Z,1568313284.248 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:44.248Z,1568313284.248 [Science:HighestChlPeakReport] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2019-09-12T18:34:44.257Z,1568313284.257 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2019-09-12T18:34:44.257Z,1568313284.257 [Science:PeakDetectChl] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2019-09-12T18:34:44.257Z,1568313284.257 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2019-09-12T18:34:44.257Z,1568313284.257 [Science:Read_Oil] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:H] Stopped
2019-09-12T18:34:44.257Z,1568313284.257 [Science:G] Running Loop=1
2019-09-12T18:34:44.258Z,1568313284.258 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2019-09-12T18:34:44.258Z,1568313284.258 [Science:F] Stopped
2019-09-12T18:34:44.258Z,1568313284.258 [Science:E] Stopped
2019-09-12T18:34:44.258Z,1568313284.258 [Science:D] Running Loop=1
2019-09-12T18:34:44.259Z,1568313284.259 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2019-09-12T18:34:44.259Z,1568313284.259 [Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2019-09-12T18:34:44.259Z,1568313284.259 [Science:C] Running Loop=1
2019-09-12T18:34:44.260Z,1568313284.260 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2019-09-12T18:34:44.260Z,1568313284.260 [Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2019-09-12T18:34:44.260Z,1568313284.260 [Science:B] Stopped
2019-09-12T18:34:44.260Z,1568313284.260 [Science:A] Stopped
2019-09-12T18:34:44.567Z,1568313284.567 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2019-09-12T18:34:44.567Z,1568313284.567 [WetLabsBB2FL](INFO): Powering up
2019-09-12T18:34:44.582Z,1568313284.582 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-09-12T18:34:47.594Z,1568313287.594 [CTD_Seabird](ERROR): Failed to parse device response: <!--startlogging-->
2019-09-12T18:34:49.603Z,1568313289.603 [CTD_Seabird](ERROR): Salinity reading out of range: 15.804309 psu
2019-09-12T18:34:50.709Z,1568313290.709 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4383.662109 ug/l
2019-09-12T18:34:50.709Z,1568313290.709 [Reporter](INFO): sea_water_salinity 32.236397 psu
2019-09-12T18:34:51.902Z,1568313291.902 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 5277.852051 ug/l
2019-09-12T18:34:51.903Z,1568313291.903 [Reporter](INFO): sea_water_salinity 33.515591 psu
2019-09-12T18:34:52.719Z,1568313292.719 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 6052.811035 ug/l
2019-09-12T18:34:52.720Z,1568313292.720 [Reporter](INFO): sea_water_salinity 33.519318 psu
2019-09-12T18:34:53.919Z,1568313293.919 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 6289.915527 ug/l
2019-09-12T18:34:53.920Z,1568313293.920 [Reporter](INFO): sea_water_salinity 33.516922 psu
2019-09-12T18:34:54.706Z,1568313294.706 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 6144.452148 ug/l
2019-09-12T18:34:54.706Z,1568313294.706 [Reporter](INFO): sea_water_salinity 33.514469 psu
2019-09-12T18:34:55.983Z,1568313295.983 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 5900.243652 ug/l
2019-09-12T18:34:55.984Z,1568313295.984 [Reporter](INFO): sea_water_salinity 33.514301 psu
2019-09-12T18:34:56.763Z,1568313296.763 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 5634.157715 ug/l
2019-09-12T18:34:56.764Z,1568313296.764 [Reporter](INFO): sea_water_salinity 33.512928 psu
2019-09-12T18:34:57.931Z,1568313297.931 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 5385.722168 ug/l
2019-09-12T18:34:57.932Z,1568313297.932 [Reporter](INFO): sea_water_salinity 33.512276 psu
2019-09-12T18:34:58.809Z,1568313298.809 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 5169.353516 ug/l
2019-09-12T18:34:58.809Z,1568313298.809 [Reporter](INFO): sea_water_salinity 33.511463 psu
2019-09-12T18:34:59.970Z,1568313299.970 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4982.705566 ug/l
2019-09-12T18:34:59.971Z,1568313299.971 [Reporter](INFO): sea_water_salinity 33.510082 psu
2019-09-12T18:35:00.753Z,1568313300.753 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4821.978516 ug/l
2019-09-12T18:35:00.754Z,1568313300.754 [Reporter](INFO): sea_water_salinity 33.508137 psu
2019-09-12T18:35:01.985Z,1568313301.985 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4681.096680 ug/l
2019-09-12T18:35:01.986Z,1568313301.986 [Reporter](INFO): sea_water_salinity 33.506104 psu
2019-09-12T18:35:02.784Z,1568313302.784 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4559.481934 ug/l
2019-09-12T18:35:02.784Z,1568313302.784 [Reporter](INFO): sea_water_salinity 33.504005 psu
2019-09-12T18:35:03.988Z,1568313303.988 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4452.019043 ug/l
2019-09-12T18:35:03.989Z,1568313303.989 [Reporter](INFO): sea_water_salinity 33.502148 psu
2019-09-12T18:35:04.806Z,1568313304.806 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4357.050293 ug/l
2019-09-12T18:35:04.807Z,1568313304.807 [Reporter](INFO): sea_water_salinity 33.500778 psu
2019-09-12T18:35:06.019Z,1568313306.019 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4273.437500 ug/l
2019-09-12T18:35:06.020Z,1568313306.020 [Reporter](INFO): sea_water_salinity 33.500305 psu
2019-09-12T18:35:08.037Z,1568313308.037 [Reporter](INFO): mass_concentration_of_oxygen_in_sea_water 4130.439453 ug/l
2019-09-12T18:35:08.038Z,1568313308.038 [Reporter](INFO): sea_water_salinity 33.501144 psu
2019-09-12T18:35:08.798Z,1568313308.798 [CommandLine](IMPORTANT): got command stop
2019-09-12T18:35:08.799Z,1568313308.799 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2019-09-12T18:35:08.829Z,1568313308.829 [MissionManager](INFO): MissionManager is completed.
2019-09-12T18:35:08.829Z,1568313308.829 [MissionManager](INFO): Uninitializing Mission Science
2019-09-12T18:35:08.829Z,1568313308.829 [Science] Stopped
2019-09-12T18:35:08.829Z,1568313308.829 [Science](DEBUG): Aggregate::uninitialize Science
2019-09-12T18:35:08.829Z,1568313308.829 [Science:C] Stopped
2019-09-12T18:35:08.829Z,1568313308.829 [Science:D] Stopped
2019-09-12T18:35:08.829Z,1568313308.829 [Science:G] Stopped
2019-09-12T18:35:09.243Z,1568313309.243 [MissionManager](IMPORTANT): Started mission Default
2019-09-12T18:35:09.244Z,1568313309.244 [Default] Running Loop=1
2019-09-12T18:35:09.245Z,1568313309.245 [Default](DEBUG): Aggregate::initialize Default
2019-09-12T18:35:09.246Z,1568313309.246 [Default:B.GoToSurface] Running Loop=1
2019-09-12T18:35:09.246Z,1568313309.246 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2019-09-12T18:35:09.247Z,1568313309.247 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2019-09-12T18:35:09.249Z,1568313309.249 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2019-09-12T18:35:09.251Z,1568313309.251 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2019-09-12T18:35:09.252Z,1568313309.252 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2019-09-12T18:35:09.261Z,1568313309.261 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2019-09-12T18:35:09.261Z,1568313309.261 [Default:A.Wait] Running Loop=1
2019-09-12T18:35:09.262Z,1568313309.262 [Default:A.Wait](DEBUG): Initialize Wait Component.
2019-09-12T18:35:09.357Z,1568313309.357 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:35:10.006Z,1568313310.006 [NAL9602](INFO): SBD MO Status=2, MOMSN=1271, MT Status=2, MTMSN=0
2019-09-12T18:35:10.006Z,1568313310.006 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2019-09-12T18:35:22.580Z,1568313322.580 [Default:A.Wait](INFO): Done Waiting.
2019-09-12T18:35:22.580Z,1568313322.580 [Default:A.Wait] Stopped
2019-09-12T18:35:22.580Z,1568313322.580 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2019-09-12T18:35:22.967Z,1568313322.967 [Default:CheckIn] Running Loop=1
2019-09-12T18:35:22.967Z,1568313322.967 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2019-09-12T18:35:22.967Z,1568313322.967 [Default:CheckIn:Read_GPS] Running Loop=1
2019-09-12T18:35:29.408Z,1568313329.408 [NAL9602](INFO): SBD MO Status=2, MOMSN=1271, MT Status=2, MTMSN=0
2019-09-12T18:35:29.408Z,1568313329.408 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2019-09-12T18:35:39.183Z,1568313339.183 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2019-09-12T18:35:54.856Z,1568313354.856 [NAL9602](INFO): SBD MO Status=2, MOMSN=1271, MT Status=2, MTMSN=0
2019-09-12T18:35:54.856Z,1568313354.856 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2019-09-12T18:35:55.674Z,1568313355.674 [DVL_micro](ERROR): Failed to parse:
:BD,+00000000.00,+00000000.00,+00000009.99,000.00
2019-09-12T18:36:11.824Z,1568313371.824 [NAL9602](INFO): SBD MO Status=2, MOMSN=1271, MT Status=2, MTMSN=0
2019-09-12T18:36:11.824Z,1568313371.824 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2019-09-12T18:36:17.964Z,1568313377.964 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:36:19.577Z,1568313379.577 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2019-09-12T18:36:29.200Z,1568313389.200 [NAL9602](INFO): SBD MO Status=2, MOMSN=1271, MT Status=2, MTMSN=0
2019-09-12T18:36:29.200Z,1568313389.200 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2019-09-12T18:36:30.911Z,1568313390.911 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2019-09-12T18:36:32.220Z,1568313392.220 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2019-09-12T18:36:38.892Z,1568313398.892 [DVL_micro](ERROR): only read 2 of 4 data items
2019-09-12T18:36:38.892Z,1568313398.892 [DVL_micro](ERROR): Failed to parse:
:RD,+99999.99,+99999.99
2019-09-12T18:36:48.986Z,1568313408.986 [DVL_micro](ERROR): only read 0 of 1 data item for BIT error
2019-09-12T18:36:48.987Z,1568313408.987 [DVL_micro](ERROR): Failed to parse:
:TS,00000000000000,35.0,+19.,1489.0,000
2019-09-12T18:37:06.783Z,1568313426.783 [DVL_micro](ERROR): Failed to parse:
:WI,+01546,+01179,+00949,+00000+01546,+01179,+00949,+00000,I
2019-09-12T18:37:07.281Z,1568313427.281 [CommandLine](IMPORTANT): got command restart application
2019-09-12T18:37:08.285Z,1568313428.285 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:08.285Z,1568313428.285 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.468Z,1568313428.468 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2019-09-12T18:37:08.469Z,1568313428.469 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.469Z,1568313428.469 [CommandLine](INFO): Join timeout helper Thread ID is 960
2019-09-12T18:37:08.470Z,1568313428.470 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2019-09-12T18:37:08.470Z,1568313428.470 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.470Z,1568313428.470 [NavChartDb](INFO): Join timeout helper Thread ID is 961
2019-09-12T18:37:08.629Z,1568313428.629 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:08.629Z,1568313428.629 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.649Z,1568313428.649 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2019-09-12T18:37:08.649Z,1568313428.649 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.649Z,1568313428.649 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 962
2019-09-12T18:37:08.765Z,1568313428.765 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:08.765Z,1568313428.765 [WetLabsBB2FL](INFO): Powering down
2019-09-12T18:37:08.766Z,1568313428.766 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.781Z,1568313428.781 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2019-09-12T18:37:08.781Z,1568313428.781 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:08.781Z,1568313428.781 [CTD_Seabird](INFO): Join timeout helper Thread ID is 963
2019-09-12T18:37:09.161Z,1568313429.161 [CTD_Seabird](INFO): Powering down
2019-09-12T18:37:09.181Z,1568313429.181 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:09.181Z,1568313429.181 [CTD_Seabird](INFO): Powering down
2019-09-12T18:37:09.193Z,1568313429.193 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.209Z,1568313429.209 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2019-09-12T18:37:09.209Z,1568313429.209 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.209Z,1568313429.209 [Radio_Surface](INFO): Join timeout helper Thread ID is 964
2019-09-12T18:37:09.361Z,1568313429.361 [Radio_Surface](INFO): Powering down
2019-09-12T18:37:09.362Z,1568313429.362 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:09.362Z,1568313429.362 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.374Z,1568313429.374 [ComponentRegistry](INFO): Shutting down DataOverHttps ThreadHandler
2019-09-12T18:37:09.374Z,1568313429.374 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.374Z,1568313429.374 [DataOverHttps](INFO): Join timeout helper Thread ID is 965
2019-09-12T18:37:09.441Z,1568313429.441 [DataOverHttps ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:09.441Z,1568313429.441 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.457Z,1568313429.457 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2019-09-12T18:37:09.457Z,1568313429.457 [logger ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.458Z,1568313429.458 [logger](INFO): Join timeout helper Thread ID is 966
2019-09-12T18:37:09.465Z,1568313429.465 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:09.465Z,1568313429.465 [logger ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.477Z,1568313429.477 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2019-09-12T18:37:09.477Z,1568313429.477 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.478Z,1568313429.478 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2019-09-12T18:37:09.478Z,1568313429.478 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.478Z,1568313429.478 [controlThread](INFO): Join timeout helper Thread ID is 967
2019-09-12T18:37:09.573Z,1568313429.573 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2019-09-12T18:37:09.573Z,1568313429.573 [controlThread](DEBUG): Uninitializing ControlThread
2019-09-12T18:37:09.573Z,1568313429.573 [AHRS_M2](INFO): Powering down
2019-09-12T18:37:09.717Z,1568313429.717 [DVL_micro](INFO): Powering down
2019-09-12T18:37:09.718Z,1568313429.718 [NAL9602](INFO): Powering down
2019-09-12T18:37:09.719Z,1568313429.719 [DAT](INFO): Powering down
2019-09-12T18:37:09.838Z,1568313429.838 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2019-09-12T18:37:09.839Z,1568313429.839 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2019-09-12T18:37:09.840Z,1568313429.840 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2019-09-12T18:37:09.840Z,1568313429.840 [MissionManager](INFO): Uninitializing Mission Default
2019-09-12T18:37:09.840Z,1568313429.840 [Default] Stopped
2019-09-12T18:37:09.840Z,1568313429.840 [Default](DEBUG): Aggregate::uninitialize Default
2019-09-12T18:37:09.840Z,1568313429.840 [Default:B.GoToSurface] Stopped
2019-09-12T18:37:09.840Z,1568313429.840 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2019-09-12T18:37:09.841Z,1568313429.841 [Default:CheckIn] Stopped
2019-09-12T18:37:09.841Z,1568313429.841 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2019-09-12T18:37:09.841Z,1568313429.841 [Default:CheckIn:Read_GPS] Stopped
2019-09-12T18:37:09.843Z,1568313429.843 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2019-09-12T18:37:09.843Z,1568313429.843 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2019-09-12T18:37:09.843Z,1568313429.843 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2019-09-12T18:37:09.844Z,1568313429.844 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2019-09-12T18:37:09.844Z,1568313429.844 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2019-09-12T18:37:09.844Z,1568313429.844 [BuoyancyServo](INFO): Powering down
2019-09-12T18:37:09.857Z,1568313429.857 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2019-09-12T18:37:09.857Z,1568313429.857 [ElevatorServo](INFO): Powering down
2019-09-12T18:37:09.858Z,1568313429.858 [MassServo](DEBUG): Uninitialize Mass Servo.
2019-09-12T18:37:09.858Z,1568313429.858 [MassServo](INFO): Powering down
2019-09-12T18:37:09.858Z,1568313429.858 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2019-09-12T18:37:09.859Z,1568313429.859 [RudderServo](INFO): Powering down
2019-09-12T18:37:09.859Z,1568313429.859 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2019-09-12T18:37:09.859Z,1568313429.859 [ThrusterServo](INFO): Powering down
2019-09-12T18:37:09.860Z,1568313429.860 [SBIT](DEBUG): Uninitialize SBIT Component.
2019-09-12T18:37:09.861Z,1568313429.861 [IBIT](DEBUG): Uninitialize IBIT Component.
2019-09-12T18:37:09.861Z,1568313429.861 [CBIT](DEBUG): Uninitialize CBIT Component.
2019-09-12T18:37:09.861Z,1568313429.861 [CBIT](DEBUG): Powering off loads.
2019-09-12T18:37:09.872Z,1568313429.872 [CBIT](DEBUG): Disabling WDT.
2019-09-12T18:37:09.884Z,1568313429.884 [CBIT](DEBUG): Opening all GF detection circuits.
2019-09-12T18:37:09.885Z,1568313429.885 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.974Z,1568313429.974 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:09.982Z,1568313429.982 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:10.024Z,1568313430.024 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:10.027Z,1568313430.027 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:10.067Z,1568313430.067 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-09-12T18:37:10.139Z,1568313430.139 [logger ThreadHandler](INFO): Thread cancelled.