2018-09-07T19:03:31.167Z,1536347011.167 [Supervisor](DEBUG): Initializing supervisor.
2018-09-07T19:03:31.170Z,1536347011.170 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-09-07T19:03:31.170Z,1536347011.170 [SyncHandler](INFO): Protected caller Thread ID is 799
2018-09-07T19:03:31.171Z,1536347011.171 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-09-07T19:03:31.172Z,1536347011.172 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-09-07T19:03:31.172Z,1536347011.172 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 800
2018-09-07T19:03:31.175Z,1536347011.175 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-09-07T19:03:31.187Z,1536347011.187 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-09-07T19:03:31.188Z,1536347011.188 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-09-07T19:03:31.189Z,1536347011.189 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 801
2018-09-07T19:03:31.190Z,1536347011.190 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-09-07T19:03:31.191Z,1536347011.191 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-09-07T19:03:31.191Z,1536347011.191 [logger ThreadHandler](INFO): Protected caller Thread ID is 802
2018-09-07T19:03:31.193Z,1536347011.193 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-09-07T19:03:31.193Z,1536347011.193 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-09-07T19:03:31.199Z,1536347011.199 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-09-07T19:03:31.559Z,1536347011.559 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-09-07T19:03:31.561Z,1536347011.561 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-09-07T19:03:31.768Z,1536347011.768 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-09-07T19:03:31.769Z,1536347011.769 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-09-07T19:03:32.252Z,1536347012.252 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-09-07T19:03:32.252Z,1536347012.252 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-09-07T19:03:32.422Z,1536347012.422 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-09-07T19:03:32.423Z,1536347012.423 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-09-07T19:03:32.725Z,1536347012.725 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-09-07T19:03:32.726Z,1536347012.726 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-09-07T19:03:32.866Z,1536347012.866 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-09-07T19:03:32.867Z,1536347012.867 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-09-07T19:03:33.222Z,1536347013.222 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-09-07T19:03:33.223Z,1536347013.223 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-09-07T19:03:33.306Z,1536347013.306 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-09-07T19:03:33.405Z,1536347013.405 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-09-07T19:03:33.406Z,1536347013.406 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-09-07T19:03:33.515Z,1536347013.515 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-09-07T19:03:33.516Z,1536347013.516 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-09-07T19:03:33.848Z,1536347013.848 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-09-07T19:03:33.849Z,1536347013.849 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-09-07T19:03:34.067Z,1536347014.067 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-09-07T19:03:34.068Z,1536347014.068 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-09-07T19:03:34.539Z,1536347014.539 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-09-07T19:03:34.540Z,1536347014.540 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-09-07T19:03:35.300Z,1536347015.300 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-09-07T19:03:35.301Z,1536347015.301 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-09-07T19:03:35.826Z,1536347015.826 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-09-07T19:03:35.828Z,1536347015.828 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-tethys/
2018-09-07T19:03:35.833Z,1536347015.833 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Control.cfg
2018-09-07T19:03:35.933Z,1536347015.933 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Navigation.cfg
2018-09-07T19:03:36.027Z,1536347016.027 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Simulator.cfg
2018-09-07T19:03:36.115Z,1536347016.115 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/logger.cfg
2018-09-07T19:03:36.196Z,1536347016.196 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Battery.cfg
2018-09-07T19:03:36.433Z,1536347016.433 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-09-07T19:03:36.434Z,1536347016.434 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Science.cfg
2018-09-07T19:03:36.579Z,1536347016.579 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/secure.cfg
2018-09-07T19:03:36.664Z,1536347016.664 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/workSite.cfg
2018-09-07T19:03:36.758Z,1536347016.758 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Servo.cfg
2018-09-07T19:03:36.858Z,1536347016.858 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/BIT.cfg
2018-09-07T19:03:36.957Z,1536347016.957 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/Sensor.cfg
2018-09-07T19:03:37.107Z,1536347017.107 [Supervisor](INFO): Opening Config file at: Config/lrauv-tethys/vehicle.cfg
2018-09-07T19:03:37.311Z,1536347017.311 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-09-07T19:03:37.322Z,1536347017.322 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-09-07T19:03:37.476Z,1536347017.476 [SBIT](DEBUG): Construct Startup Built In Test.
2018-09-07T19:03:37.507Z,1536347017.507 [SBIT] Loaded
2018-09-07T19:03:37.507Z,1536347017.507 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-09-07T19:03:37.508Z,1536347017.508 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-09-07T19:03:37.538Z,1536347017.538 [IBIT] Loaded
2018-09-07T19:03:37.538Z,1536347017.538 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-09-07T19:03:37.541Z,1536347017.541 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-09-07T19:03:37.701Z,1536347017.701 [CBIT] Loaded
2018-09-07T19:03:37.702Z,1536347017.702 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-09-07T19:03:37.702Z,1536347017.702 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-09-07T19:03:37.705Z,1536347017.705 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-09-07T19:03:37.742Z,1536347017.742 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-09-07T19:03:37.743Z,1536347017.743 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-09-07T19:03:37.985Z,1536347017.985 [CTD_Seabird] Loaded
2018-09-07T19:03:37.985Z,1536347017.985 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-09-07T19:03:37.986Z,1536347017.986 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 405B74E0
2018-09-07T19:03:37.987Z,1536347017.987 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 884
2018-09-07T19:03:38.005Z,1536347018.005 [ESPComponent] Loaded
2018-09-07T19:03:38.006Z,1536347018.006 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-09-07T19:03:38.020Z,1536347018.020 [PAR_Licor] Loaded
2018-09-07T19:03:38.021Z,1536347018.021 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-09-07T19:03:38.072Z,1536347018.072 [WetLabsBB2FL] Loaded
2018-09-07T19:03:38.072Z,1536347018.072 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-09-07T19:03:38.073Z,1536347018.073 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 405E74E0
2018-09-07T19:03:38.073Z,1536347018.073 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 885
2018-09-07T19:03:38.074Z,1536347018.074 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-09-07T19:03:38.075Z,1536347018.075 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-09-07T19:03:38.200Z,1536347018.200 [BuoyancyServo] Loaded
2018-09-07T19:03:38.200Z,1536347018.200 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-09-07T19:03:38.216Z,1536347018.216 [ElevatorServo] Loaded
2018-09-07T19:03:38.216Z,1536347018.216 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-09-07T19:03:38.231Z,1536347018.231 [MassServo] Loaded
2018-09-07T19:03:38.231Z,1536347018.231 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-09-07T19:03:38.247Z,1536347018.247 [RudderServo] Loaded
2018-09-07T19:03:38.247Z,1536347018.247 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-09-07T19:03:38.262Z,1536347018.262 [ThrusterServo] Loaded
2018-09-07T19:03:38.263Z,1536347018.263 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-09-07T19:03:38.263Z,1536347018.263 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-09-07T19:03:38.264Z,1536347018.264 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-09-07T19:03:38.546Z,1536347018.546 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-09-07T19:03:38.546Z,1536347018.546 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-09-07T19:03:39.162Z,1536347019.162 [AHRS_M2] Loaded
2018-09-07T19:03:39.162Z,1536347019.162 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2018-09-07T19:03:39.299Z,1536347019.299 [DataOverHttps] Loaded
2018-09-07T19:03:39.300Z,1536347019.300 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-09-07T19:03:39.313Z,1536347019.313 [Depth_Keller] Loaded
2018-09-07T19:03:39.313Z,1536347019.313 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-09-07T19:03:39.318Z,1536347019.318 [DropWeight] Loaded
2018-09-07T19:03:39.319Z,1536347019.319 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-09-07T19:03:39.410Z,1536347019.410 [NAL9602] Loaded
2018-09-07T19:03:39.410Z,1536347019.410 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-09-07T19:03:39.416Z,1536347019.416 [Onboard] Loaded
2018-09-07T19:03:39.416Z,1536347019.416 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-09-07T19:03:39.423Z,1536347019.423 [Radio_Surface] Loaded
2018-09-07T19:03:39.423Z,1536347019.423 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-09-07T19:03:39.424Z,1536347019.424 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408CE4E0
2018-09-07T19:03:39.425Z,1536347019.425 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 886
2018-09-07T19:03:39.557Z,1536347019.557 [DAT] Loaded
2018-09-07T19:03:39.558Z,1536347019.558 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2018-09-07T19:03:41.387Z,1536347021.387 [BPC1] Loaded
2018-09-07T19:03:41.387Z,1536347021.387 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-09-07T19:03:41.388Z,1536347021.388 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-09-07T19:03:41.388Z,1536347021.388 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-09-07T19:03:41.414Z,1536347021.414 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-09-07T19:03:41.416Z,1536347021.416 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-09-07T19:03:41.521Z,1536347021.521 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-09-07T19:03:41.522Z,1536347021.522 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-09-07T19:03:41.674Z,1536347021.674 [DeadReckonUsingMultipleVelocitySources] Loaded
2018-09-07T19:03:41.674Z,1536347021.674 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2018-09-07T19:03:41.730Z,1536347021.730 [DeadReckonUsingSpeedCalculator] Loaded
2018-09-07T19:03:41.731Z,1536347021.731 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-09-07T19:03:41.748Z,1536347021.748 [NavChart] Loaded
2018-09-07T19:03:41.748Z,1536347021.748 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-09-07T19:03:41.753Z,1536347021.753 [UniversalFixResidualReporter] Loaded
2018-09-07T19:03:41.753Z,1536347021.753 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-09-07T19:03:41.753Z,1536347021.753 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-09-07T19:03:41.754Z,1536347021.754 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-09-07T19:03:41.883Z,1536347021.883 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-09-07T19:03:41.884Z,1536347021.884 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-09-07T19:03:41.973Z,1536347021.973 [VerticalControl](DEBUG): Construct VerticalControl.
2018-09-07T19:03:42.065Z,1536347022.065 [VerticalControl] Loaded
2018-09-07T19:03:42.065Z,1536347022.065 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-09-07T19:03:42.066Z,1536347022.066 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-09-07T19:03:42.126Z,1536347022.126 [HorizontalControl] Loaded
2018-09-07T19:03:42.126Z,1536347022.126 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-09-07T19:03:42.127Z,1536347022.127 [SpeedControl](DEBUG): Construct SpeedControl.
2018-09-07T19:03:42.129Z,1536347022.129 [SpeedControl] Loaded
2018-09-07T19:03:42.129Z,1536347022.129 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-09-07T19:03:42.130Z,1536347022.130 [LoopControl](DEBUG): Construct LoopControl.
2018-09-07T19:03:42.130Z,1536347022.130 [LoopControl] Loaded
2018-09-07T19:03:42.131Z,1536347022.131 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-09-07T19:03:42.131Z,1536347022.131 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-09-07T19:03:42.132Z,1536347022.132 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-09-07T19:03:42.187Z,1536347022.187 [DepthRateCalculator] Loaded
2018-09-07T19:03:42.188Z,1536347022.188 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-09-07T19:03:42.193Z,1536347022.193 [PitchRateCalculator] Loaded
2018-09-07T19:03:42.193Z,1536347022.193 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-09-07T19:03:42.206Z,1536347022.206 [SpeedCalculator] Loaded
2018-09-07T19:03:42.206Z,1536347022.206 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-09-07T19:03:42.228Z,1536347022.228 [TempGradientCalculator] Loaded
2018-09-07T19:03:42.228Z,1536347022.228 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-09-07T19:03:42.245Z,1536347022.245 [VerticalTemperatureHomogeneityIndexCalculator] Loaded
2018-09-07T19:03:42.245Z,1536347022.245 [ComponentRegistry](DEBUG): SyncComponent "VerticalTemperatureHomogeneityIndexCalculator" handled in the control thread.
2018-09-07T19:03:42.251Z,1536347022.251 [YawRateCalculator] Loaded
2018-09-07T19:03:42.251Z,1536347022.251 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-09-07T19:03:42.282Z,1536347022.282 [ElevatorOffsetCalculator] Loaded
2018-09-07T19:03:42.282Z,1536347022.282 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-09-07T19:03:42.283Z,1536347022.283 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-09-07T19:03:42.287Z,1536347022.287 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-09-07T19:03:42.287Z,1536347022.287 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-09-07T19:03:42.294Z,1536347022.294 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-09-07T19:03:42.295Z,1536347022.295 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A064E0
2018-09-07T19:03:42.296Z,1536347022.296 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 888
2018-09-07T19:03:42.300Z,1536347022.300 [Supervisor](INFO): Main Thread ID is 795
2018-09-07T19:03:42.301Z,1536347022.301 [Supervisor](DEBUG): Running supervisor.
2018-09-07T19:03:42.301Z,1536347022.301 [CommandLine ThreadHandler](INFO): Handler Thread ID is 889
2018-09-07T19:03:42.304Z,1536347022.304 [controlThread ThreadHandler](INFO): Handler Thread ID is 890
2018-09-07T19:03:42.304Z,1536347022.304 [controlThread](DEBUG): Initializing ControlThread
2018-09-07T19:03:42.305Z,1536347022.305 [SBIT](INFO): Initialize SBIT Component.
2018-09-07T19:03:42.306Z,1536347022.306 [SBIT](IMPORTANT): git: 2018-09-06
2018-09-07T19:03:42.306Z,1536347022.306 [SBIT](INFO): git hash: 66a1d3cbc6e0267838eeaa8d8b2ab3dc44228fef
2018-09-07T19:03:42.306Z,1536347022.306 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-09-07T19:03:42.308Z,1536347022.308 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
Kernel Reported: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-09-07T19:03:42.309Z,1536347022.309 [SBIT](INFO): Beginning SBIT in 28.000000 seconds.
2018-09-07T19:03:42.309Z,1536347022.309 [IBIT](INFO): Initialize IBIT Component.
2018-09-07T19:03:42.310Z,1536347022.310 [CBIT](DEBUG): Initialize CBIT Component.
2018-09-07T19:03:42.311Z,1536347022.311 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-09-07T19:03:42.311Z,1536347022.311 [logger ThreadHandler](INFO): Handler Thread ID is 891
2018-09-07T19:03:42.337Z,1536347022.337 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 892
2018-09-07T19:03:42.338Z,1536347022.338 [CTD_Seabird](INFO): Initializing
2018-09-07T19:03:42.338Z,1536347022.338 [CTD_Seabird](INFO): Checking LCM
2018-09-07T19:03:42.429Z,1536347022.429 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 893
2018-09-07T19:03:42.430Z,1536347022.430 [WetLabsBB2FL](INFO): Powering down
2018-09-07T19:03:42.457Z,1536347022.457 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 894
2018-09-07T19:03:42.463Z,1536347022.463 [Radio_Surface](INFO): Powering up
2018-09-07T19:03:42.473Z,1536347022.473 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-07T19:03:42.474Z,1536347022.474 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-07T19:03:42.474Z,1536347022.474 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-07T19:03:42.475Z,1536347022.475 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-07T19:03:42.475Z,1536347022.475 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-07T19:03:42.476Z,1536347022.476 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-07T19:03:42.476Z,1536347022.476 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-09-07T19:03:42.476Z,1536347022.476 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-09-07T19:03:42.487Z,1536347022.487 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-09-07T19:03:42.489Z,1536347022.489 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-09-07T19:03:42.490Z,1536347022.490 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-09-07T19:03:42.490Z,1536347022.490 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-09-07T19:03:42.491Z,1536347022.491 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-07T19:03:42.491Z,1536347022.491 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-09-07T19:03:42.492Z,1536347022.492 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-09-07T19:03:42.492Z,1536347022.492 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-09-07T19:03:42.493Z,1536347022.493 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:03:42.497Z,1536347022.497 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-09-07T19:03:42.497Z,1536347022.497 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-09-07T19:03:42.499Z,1536347022.499 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-09-07T19:03:42.587Z,1536347022.587 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 895
2018-09-07T19:03:42.709Z,1536347022.709 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-09-07T19:03:42.710Z,1536347022.710 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-09-07T19:03:42.710Z,1536347022.710 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-09-07T19:03:42.710Z,1536347022.710 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-09-07T19:03:42.710Z,1536347022.710 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-09-07T19:03:42.710Z,1536347022.710 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-09-07T19:03:42.711Z,1536347022.711 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-09-07T19:03:42.712Z,1536347022.712 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-09-07T19:03:42.712Z,1536347022.712 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-09-07T19:03:42.712Z,1536347022.712 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-09-07T19:03:42.712Z,1536347022.712 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-09-07T19:03:42.714Z,1536347022.714 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-07T19:03:42.727Z,1536347022.727 [CTD_Seabird](INFO): LCM OK
2018-09-07T19:03:42.727Z,1536347022.727 [CTD_Seabird](INFO): Powering up
2018-09-07T19:03:42.767Z,1536347022.767 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-09-07T19:03:42.768Z,1536347022.768 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-09-07T19:03:42.874Z,1536347022.874 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-09-07T19:03:42.875Z,1536347022.875 [Default:A.Wait](DEBUG): Construct Wait.
2018-09-07T19:03:42.877Z,1536347022.877 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-07T19:03:42.908Z,1536347022.908 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-09-07T19:03:42.930Z,1536347022.930 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-09-07T19:03:42.936Z,1536347022.936 [Default:E.Execute](DEBUG): Construct Execute.
2018-09-07T19:03:42.951Z,1536347022.951 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-09-07T19:03:42.963Z,1536347022.963 [controlThread](DEBUG): Component order: CycleStarter,ESPComponent,PAR_Licor,AHRS_M2,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,DAT,BPC1,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,VerticalTemperatureHomogeneityIndexCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-09-07T19:03:42.988Z,1536347022.988 [ESPComponent](INFO): powering down ESP
2018-09-07T19:03:43.387Z,1536347023.387 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2018-09-07T19:03:43.519Z,1536347023.519 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-09-07T19:03:43.540Z,1536347023.540 [Depth_Keller](ERROR): Pressure reading out of range: 2102.507080 decibar
2018-09-07T19:03:43.622Z,1536347023.622 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2018-09-07T19:03:43.622Z,1536347023.622 [DAT](INFO): Powering up
2018-09-07T19:03:43.622Z,1536347023.622 [DAT](DEBUG): Initializing DAT.
2018-09-07T19:03:43.701Z,1536347023.701 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2018-09-07T19:03:43.777Z,1536347023.777 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-07T19:03:43.871Z,1536347023.871 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:43.943Z,1536347023.943 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:44.059Z,1536347024.059 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:44.065Z,1536347024.065 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-07T19:03:44.088Z,1536347024.088 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:44.097Z,1536347024.097 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-09-07T19:03:44.120Z,1536347024.120 [MassServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:44.125Z,1536347024.125 [MassServo](DEBUG): Initializing MassServo.
2018-09-07T19:03:44.143Z,1536347024.143 [RudderServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:44.149Z,1536347024.149 [RudderServo](DEBUG): Initializing RudderServo.
2018-09-07T19:03:44.163Z,1536347024.163 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:44.169Z,1536347024.169 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-07T19:03:44.477Z,1536347024.477 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:44.478Z,1536347024.478 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:44.697Z,1536347024.697 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:44.698Z,1536347024.698 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:45.029Z,1536347025.029 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-09-07T19:03:45.029Z,1536347025.029 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-09-07T19:03:45.029Z,1536347025.029 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-07T19:03:45.029Z,1536347025.029 [BuoyancyServo](ERROR): Communications Fault
2018-09-07T19:03:45.241Z,1536347025.241 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-07T19:03:45.317Z,1536347025.317 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:45.318Z,1536347025.318 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:45.331Z,1536347025.331 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-07T19:03:45.332Z,1536347025.332 [BuoyancyServo](INFO): Powering down
2018-09-07T19:03:45.685Z,1536347025.685 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:45.701Z,1536347025.701 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.085Z,1536347026.085 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.097Z,1536347026.097 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.497Z,1536347026.497 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.498Z,1536347026.498 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.921Z,1536347026.921 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:46.933Z,1536347026.933 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-07T19:03:47.386Z,1536347027.386 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-07T19:03:47.386Z,1536347027.386 [BuoyancyServo] No Fault, FailCount= 1
2018-09-07T19:03:47.736Z,1536347027.736 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:47.736Z,1536347027.736 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-07T19:03:47.906Z,1536347027.906 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T19:03:47.988Z,1536347027.988 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-09-07T19:03:48.119Z,1536347028.119 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-09-07T19:03:48.607Z,1536347028.607 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T19:03:48.607Z,1536347028.607 [CTD_Seabird](INFO): Powering down
2018-09-07T19:03:48.713Z,1536347028.713 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-09-07T19:03:48.713Z,1536347028.713 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-09-07T19:03:48.713Z,1536347028.713 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-07T19:03:48.713Z,1536347028.713 [BuoyancyServo](ERROR): Communications Fault
2018-09-07T19:03:48.957Z,1536347028.957 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-07T19:03:49.076Z,1536347029.076 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-07T19:03:49.077Z,1536347029.077 [BuoyancyServo](INFO): Powering down
2018-09-07T19:03:51.078Z,1536347031.078 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-07T19:03:51.078Z,1536347031.078 [BuoyancyServo] No Fault, FailCount= 2
2018-09-07T19:03:51.430Z,1536347031.430 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:03:51.550Z,1536347031.550 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-07T19:04:07.795Z,1536347047.795 [DAT](INFO): setting local address to 6
2018-09-07T19:04:08.197Z,1536347048.197 [DAT](INFO): set local address to 6
2018-09-07T19:04:09.776Z,1536347049.776 [NAL9602](INFO): Powering up NAL9602
2018-09-07T19:04:11.064Z,1536347051.064 [SBIT](IMPORTANT): Beginning Startup BIT
2018-09-07T19:04:11.073Z,1536347051.073 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-07T19:04:20.771Z,1536347060.771 [NAL9602](INFO): NAL9602 initialized
2018-09-07T19:04:22.104Z,1536347062.104 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): -0.009910
CHAN A1 (24V): 0.181406
CHAN A2 (12V): -0.004355
CHAN A3 (5V): -0.002778
CHAN B0 (3.3V): -0.001151
CHAN B1 (3.15aV): -0.001555
CHAN B2 (3.15bV): -0.001140
CHAN B3 (GND): -0.000144
OPEN: 0.004318
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-07T19:04:34.625Z,1536347074.625 [NAL9602](INFO): SBD MO Status=0, MOMSN=48536, MT Status=0, MTMSN=0
2018-09-07T19:04:34.625Z,1536347074.625 [NAL9602](INFO): No messages in MT queue
2018-09-07T19:04:49.873Z,1536347089.873 [BPC1](ERROR): Bank A: No match for stick 6 serial number:1717 in the onboard configuration file.
2018-09-07T19:04:49.873Z,1536347089.873 [BPC1](ERROR): Failed to parse Bank A battery data
2018-09-07T19:05:04.911Z,1536347104.911 [SBIT](IMPORTANT): SBIT PASSED
2018-09-07T19:05:04.994Z,1536347104.994 [CommandLine](IMPORTANT): got command configSet list
2018-09-07T19:05:04.994Z,1536347104.994 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-07T19:05:04.995Z,1536347104.995 [CommandLine](IMPORTANT): NAL9602.gpsFailTimeout=5 minute;

2018-09-07T19:05:04.995Z,1536347104.995 [CommandLine](IMPORTANT): RDI_Pathfinder.loadAtStartup=0 bool;

2018-09-07T19:05:05.210Z,1536347105.210 [MissionManager](IMPORTANT): Started mission Startup
2018-09-07T19:05:05.210Z,1536347105.210 [Startup] Running Loop=1
2018-09-07T19:05:05.211Z,1536347105.211 [Startup](DEBUG): Aggregate::initialize Startup
2018-09-07T19:05:05.211Z,1536347105.211 [Startup:A.GoToSurface] Running Loop=1
2018-09-07T19:05:05.211Z,1536347105.211 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T19:05:05.211Z,1536347105.211 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-07T19:05:05.212Z,1536347105.212 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-07T19:05:05.212Z,1536347105.212 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-07T19:05:05.213Z,1536347105.213 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T19:05:05.213Z,1536347105.213 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T19:05:05.232Z,1536347105.232 [Startup:StartupSatComms] Running Loop=1
2018-09-07T19:05:05.232Z,1536347105.232 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-09-07T19:05:05.232Z,1536347105.232 [Startup:StartupSatComms:A] Running Loop=1
2018-09-07T19:05:05.618Z,1536347105.618 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-07T19:06:05.233Z,1536347165.233 [Startup:StartupSatComms:A](INFO): Timed out from 2018-09-07T19:05:05.2Z
2018-09-07T19:06:05.233Z,1536347165.233 [Startup:StartupSatComms:A] Stopped
2018-09-07T19:06:05.234Z,1536347165.234 [Startup:StartupSatComms:B] Running Loop=1
2018-09-07T19:06:05.646Z,1536347165.646 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-07T19:06:21.720Z,1536347181.720 [NAL9602](INFO): SBD MO Status=1, MOMSN=48537, MT Status=0, MTMSN=0
2018-09-07T19:06:21.783Z,1536347181.783 [NAL9602](INFO): Sent 61 bytes from file Logs/20180907T170913/Courier0034.lzma
2018-09-07T19:06:21.784Z,1536347181.784 [NAL9602](INFO): Packets left to send: 0
2018-09-07T19:06:21.785Z,1536347181.785 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T170913/Courier0034.lzma.parts/0000.sbd
2018-09-07T19:06:21.786Z,1536347181.786 [NAL9602](DEBUG): Completed sending Logs/20180907T170913/Courier0034.lzma
2018-09-07T19:06:35.840Z,1536347195.840 [NAL9602](INFO): SBD MO Status=1, MOMSN=48538, MT Status=0, MTMSN=0
2018-09-07T19:06:35.894Z,1536347195.894 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T170913/Express0035.lzma
2018-09-07T19:06:35.894Z,1536347195.894 [NAL9602](INFO): Packets left to send: 1
2018-09-07T19:06:35.896Z,1536347195.896 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T170913/Express0035.lzma.parts/0001.sbd
2018-09-07T19:06:42.789Z,1536347202.789 [DeadReckonUsingMultipleVelocitySources](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-07T19:06:42.789Z,1536347202.789 [DeadReckonUsingMultipleVelocitySources] Software Fault, FailCount= 1
2018-09-07T19:06:42.789Z,1536347202.789 [DeadReckonUsingMultipleVelocitySources](ERROR): Software Fault
2018-09-07T19:06:42.791Z,1536347202.791 [DeadReckonUsingSpeedCalculator](ERROR): Will not write estimated position: latitudeAccuracy_ = nan, longitudeAccuracy_ = nan, depthAccuracy_ = nan
2018-09-07T19:06:42.791Z,1536347202.791 [DeadReckonUsingSpeedCalculator] Software Fault, FailCount= 1
2018-09-07T19:06:42.791Z,1536347202.791 [DeadReckonUsingSpeedCalculator](ERROR): Software Fault
2018-09-07T19:06:42.821Z,1536347202.821 [CBIT](ERROR): Software Fault in component: DeadReckonUsingMultipleVelocitySources
2018-09-07T19:06:42.822Z,1536347202.822 [CBIT](ERROR): Software Fault in component: DeadReckonUsingSpeedCalculator
2018-09-07T19:06:43.228Z,1536347203.228 [CBIT](INFO): Clearing failed state for component DeadReckonUsingMultipleVelocitySources
2018-09-07T19:06:43.228Z,1536347203.228 [DeadReckonUsingMultipleVelocitySources] No Fault, FailCount= 1
2018-09-07T19:06:43.228Z,1536347203.228 [CBIT](INFO): Clearing failed state for component DeadReckonUsingSpeedCalculator
2018-09-07T19:06:43.228Z,1536347203.228 [DeadReckonUsingSpeedCalculator] No Fault, FailCount= 1
2018-09-07T19:06:43.585Z,1536347203.585 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-07T19:06:43.586Z,1536347203.586 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-07T19:06:43.586Z,1536347203.586 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-07T19:06:43.586Z,1536347203.586 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-07T19:06:43.587Z,1536347203.587 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-07T19:06:43.587Z,1536347203.587 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-07T19:06:43.995Z,1536347203.995 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 1.2 s old, using for 20.0 s.
2018-09-07T19:06:44.391Z,1536347204.391 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 1.6 s old, using for 20.0 s.
2018-09-07T19:06:44.780Z,1536347204.780 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.0 s old, using for 20.0 s.
2018-09-07T19:06:45.191Z,1536347205.191 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.4 s old, using for 20.0 s.
2018-09-07T19:06:45.586Z,1536347205.586 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 2.8 s old, using for 20.0 s.
2018-09-07T19:06:45.986Z,1536347205.986 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 3.2 s old, using for 20.0 s.
2018-09-07T19:06:46.387Z,1536347206.387 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 3.6 s old, using for 20.0 s.
2018-09-07T19:06:46.746Z,1536347206.746 [NAL9602](INFO): SBD MO Status=1, MOMSN=48539, MT Status=0, MTMSN=0
2018-09-07T19:06:46.801Z,1536347206.801 [NAL9602](INFO): Sent 282 bytes from file Logs/20180907T170913/Express0035.lzma
2018-09-07T19:06:46.801Z,1536347206.801 [NAL9602](INFO): Packets left to send: 0
2018-09-07T19:06:46.802Z,1536347206.802 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T170913/Express0035.lzma.parts/0000.sbd
2018-09-07T19:06:46.803Z,1536347206.803 [NAL9602](DEBUG): Completed sending Logs/20180907T170913/Express0035.lzma
2018-09-07T19:06:46.848Z,1536347206.848 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.1 s old, using for 20.0 s.
2018-09-07T19:06:47.527Z,1536347207.527 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.7 s old, using for 20.0 s.
2018-09-07T19:06:47.635Z,1536347207.635 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 4.8 s old, using for 20.0 s.
2018-09-07T19:06:50.024Z,1536347210.024 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 7.2 s old, using for 20.0 s.
2018-09-07T19:06:50.155Z,1536347210.155 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 7.4 s old, using for 20.0 s.
2018-09-07T19:06:50.500Z,1536347210.500 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 7.7 s old, using for 20.0 s.
2018-09-07T19:06:50.895Z,1536347210.895 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 8.1 s old, using for 20.0 s.
2018-09-07T19:06:51.297Z,1536347211.297 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 8.5 s old, using for 20.0 s.
2018-09-07T19:06:51.696Z,1536347211.696 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 8.9 s old, using for 20.0 s.
2018-09-07T19:06:52.097Z,1536347212.097 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 9.3 s old, using for 20.0 s.
2018-09-07T19:06:52.496Z,1536347212.496 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 9.7 s old, using for 20.0 s.
2018-09-07T19:06:52.899Z,1536347212.899 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 10.1 s old, using for 20.0 s.
2018-09-07T19:06:53.299Z,1536347213.299 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 10.5 s old, using for 20.0 s.
2018-09-07T19:06:53.694Z,1536347213.694 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 10.9 s old, using for 20.0 s.
2018-09-07T19:06:54.103Z,1536347214.103 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 11.3 s old, using for 20.0 s.
2018-09-07T19:06:54.503Z,1536347214.503 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 11.7 s old, using for 20.0 s.
2018-09-07T19:06:54.928Z,1536347214.928 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 12.1 s old, using for 20.0 s.
2018-09-07T19:06:55.311Z,1536347215.311 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 12.5 s old, using for 20.0 s.
2018-09-07T19:06:55.712Z,1536347215.712 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 12.9 s old, using for 20.0 s.
2018-09-07T19:06:56.101Z,1536347216.101 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 13.3 s old, using for 20.0 s.
2018-09-07T19:06:56.503Z,1536347216.503 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 13.7 s old, using for 20.0 s.
2018-09-07T19:06:56.895Z,1536347216.895 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 14.1 s old, using for 20.0 s.
2018-09-07T19:06:57.300Z,1536347217.300 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 14.5 s old, using for 20.0 s.
2018-09-07T19:06:57.702Z,1536347217.702 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 14.9 s old, using for 20.0 s.
2018-09-07T19:06:58.099Z,1536347218.099 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 15.3 s old, using for 20.0 s.
2018-09-07T19:06:58.497Z,1536347218.497 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 15.7 s old, using for 20.0 s.
2018-09-07T19:06:58.868Z,1536347218.868 [NAL9602](INFO): SBD MO Status=1, MOMSN=48540, MT Status=0, MTMSN=0
2018-09-07T19:06:58.922Z,1536347218.922 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0001.lzma
2018-09-07T19:06:58.922Z,1536347218.922 [NAL9602](INFO): Packets left to send: 2
2018-09-07T19:06:58.925Z,1536347218.925 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0001.lzma.parts/0002.sbd
2018-09-07T19:06:58.960Z,1536347218.960 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 16.2 s old, using for 20.0 s.
2018-09-07T19:06:59.610Z,1536347219.610 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 16.8 s old, using for 20.0 s.
2018-09-07T19:06:59.713Z,1536347219.713 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 16.9 s old, using for 20.0 s.
2018-09-07T19:07:02.136Z,1536347222.136 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 19.3 s old, using for 20.0 s.
2018-09-07T19:07:02.256Z,1536347222.256 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 19.5 s old, using for 20.0 s.
2018-09-07T19:07:02.612Z,1536347222.612 [DeadReckonUsingMultipleVelocitySources](DEBUG): Bottom track data is 19.8 s old, using for 20.0 s.
2018-09-07T19:07:05.414Z,1536347225.414 [Startup:StartupSatComms:B](INFO): Timed out from 2018-09-07T19:06:05.2Z
2018-09-07T19:07:05.414Z,1536347225.414 [Startup:StartupSatComms:B] Stopped
2018-09-07T19:07:05.414Z,1536347225.414 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-09-07T19:07:05.414Z,1536347225.414 [Startup:StartupSatComms] Stopped
2018-09-07T19:07:05.414Z,1536347225.414 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-09-07T19:07:05.415Z,1536347225.415 [Startup](INFO): Completed Startup
2018-09-07T19:07:05.415Z,1536347225.415 [MissionManager](INFO): Startup is completed.
2018-09-07T19:07:05.416Z,1536347225.416 [MissionManager](INFO): Uninitializing Mission Startup
2018-09-07T19:07:05.416Z,1536347225.416 [Startup] Stopped
2018-09-07T19:07:05.416Z,1536347225.416 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-09-07T19:07:05.416Z,1536347225.416 [Startup:A.GoToSurface] Stopped
2018-09-07T19:07:05.416Z,1536347225.416 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T19:07:05.810Z,1536347225.810 [MissionManager](IMPORTANT): Started mission Default
2018-09-07T19:07:05.810Z,1536347225.810 [Default] Running Loop=1
2018-09-07T19:07:05.810Z,1536347225.810 [Default](DEBUG): Aggregate::initialize Default
2018-09-07T19:07:05.811Z,1536347225.811 [Default:B.GoToSurface] Running Loop=1
2018-09-07T19:07:05.811Z,1536347225.811 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T19:07:05.811Z,1536347225.811 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-07T19:07:05.811Z,1536347225.811 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-07T19:07:05.812Z,1536347225.812 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-07T19:07:05.812Z,1536347225.812 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T19:07:05.812Z,1536347225.812 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T19:07:05.813Z,1536347225.813 [Default:A.Wait] Running Loop=1
2018-09-07T19:07:05.813Z,1536347225.813 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-07T19:07:11.770Z,1536347231.770 [NAL9602](INFO): SBD MO Status=1, MOMSN=48541, MT Status=0, MTMSN=0
2018-09-07T19:07:11.813Z,1536347231.813 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0001.lzma
2018-09-07T19:07:11.813Z,1536347231.813 [NAL9602](INFO): Packets left to send: 1
2018-09-07T19:07:11.815Z,1536347231.815 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0001.lzma.parts/0001.sbd
2018-09-07T19:07:19.028Z,1536347239.028 [Default:A.Wait](INFO): Done Waiting.
2018-09-07T19:07:19.029Z,1536347239.029 [Default:A.Wait] Stopped
2018-09-07T19:07:19.029Z,1536347239.029 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-07T19:07:19.436Z,1536347239.436 [Default:CheckIn] Running Loop=1
2018-09-07T19:07:19.436Z,1536347239.436 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-07T19:07:19.436Z,1536347239.436 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-07T19:07:19.827Z,1536347239.827 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-07T19:07:27.787Z,1536347247.787 [NAL9602](INFO): GPS fix at 20180907T190720: (36.987715, -122.421828)
2018-09-07T19:07:27.838Z,1536347247.838 [Default:CheckIn:Read_GPS] Stopped
2018-09-07T19:07:27.838Z,1536347247.838 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-07T19:07:28.245Z,1536347248.245 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-07T19:07:57.109Z,1536347277.109 [NAL9602](INFO): SBD MO Status=2, MOMSN=48542, MT Status=2, MTMSN=0
2018-09-07T19:07:57.109Z,1536347277.109 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T19:08:06.856Z,1536347286.856 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003924
2018-09-07T19:08:13.945Z,1536347293.945 [DataOverHttps](INFO): Sending 212 bytes from file Logs/20180907T190331/Courier0004.lzma
2018-09-07T19:08:15.523Z,1536347295.523 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Courier0004.lzma.bak
2018-09-07T19:08:15.523Z,1536347295.523 [DataOverHttps](INFO): SBD MOMSN=8490968
2018-09-07T19:08:30.722Z,1536347310.722 [NAL9602](INFO): SBD MO Status=1, MOMSN=48542, MT Status=0, MTMSN=0
2018-09-07T19:08:30.769Z,1536347310.769 [NAL9602](INFO): Sent 212 bytes from file Logs/20180907T190331/Courier0004.lzma
2018-09-07T19:08:30.769Z,1536347310.769 [NAL9602](INFO): Packets left to send: 0
2018-09-07T19:08:30.778Z,1536347310.778 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0004.lzma.parts/0000.sbd
2018-09-07T19:08:30.779Z,1536347310.779 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0004.lzma
2018-09-07T19:08:30.865Z,1536347310.865 [Default:CheckIn:Read_Iridium] Stopped
2018-09-07T19:08:30.865Z,1536347310.865 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-07T19:08:30.865Z,1536347310.865 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-07T19:08:32.122Z,1536347312.122 [DataOverHttps](INFO): Sending 706 bytes from file Logs/20180907T190331/Express0001.lzma
2018-09-07T19:08:35.312Z,1536347315.312 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Express0001.lzma.bak
2018-09-07T19:08:35.312Z,1536347315.312 [DataOverHttps](INFO): SBD MOMSN=8490972
2018-09-07T19:09:00.946Z,1536347340.946 [NAL9602](INFO): Powering down
2018-09-07T19:10:44.493Z,1536347444.493 [DataOverHttps](IMPORTANT): SBD MTMSN=20180907T191038
2018-09-07T19:10:52.104Z,1536347452.104 [DataOverHttps](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 4 hour;set sci2.Lat1 36.983 degree;set sci2.Lon1 -122.52 degree;set sci2.YoYoMinDepth 5 meter;set sci2.YoYoMaxDepth 50 meter;set sci2.MaxDepth 60 meter;run 
2018-09-07T19:10:52.122Z,1536347452.122 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-07T19:10:52.122Z,1536347452.122 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-07T19:10:52.266Z,1536347452.266 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-07T19:10:52.268Z,1536347452.268 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-07T19:10:52.271Z,1536347452.271 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-07T19:10:52.274Z,1536347452.274 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-07T19:10:52.277Z,1536347452.277 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-07T19:10:52.280Z,1536347452.280 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-07T19:10:52.282Z,1536347452.282 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-07T19:10:52.285Z,1536347452.285 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-07T19:10:52.289Z,1536347452.289 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-07T19:10:52.292Z,1536347452.292 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-07T19:10:52.337Z,1536347452.337 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-07T19:10:52.340Z,1536347452.340 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-07T19:10:52.343Z,1536347452.343 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-07T19:10:52.366Z,1536347452.366 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-07T19:10:52.369Z,1536347452.369 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-07T19:10:52.372Z,1536347452.372 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-07T19:10:52.375Z,1536347452.375 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-07T19:10:52.407Z,1536347452.407 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-07T19:10:52.410Z,1536347452.410 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-07T19:10:52.413Z,1536347452.413 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-07T19:10:52.416Z,1536347452.416 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-07T19:10:52.433Z,1536347452.433 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-07T19:10:52.436Z,1536347452.436 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-07T19:10:52.440Z,1536347452.440 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 325.000001 cc
2018-09-07T19:10:52.466Z,1536347452.466 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.200000 cm
2018-09-07T19:10:52.489Z,1536347452.489 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-07T19:10:52.492Z,1536347452.492 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-07T19:10:52.495Z,1536347452.495 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-07T19:10:52.496Z,1536347452.496 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-07T19:10:52.890Z,1536347452.890 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-07T19:10:52.893Z,1536347452.893 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-07T19:10:52.896Z,1536347452.896 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-07T19:10:52.899Z,1536347452.899 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-07T19:10:52.936Z,1536347452.936 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-07T19:10:52.939Z,1536347452.939 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-07T19:10:52.942Z,1536347452.942 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-07T19:10:52.944Z,1536347452.944 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-07T19:10:52.971Z,1536347452.971 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-07T19:10:52.974Z,1536347452.974 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-07T19:10:52.977Z,1536347452.977 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-07T19:10:52.980Z,1536347452.980 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-07T19:10:52.984Z,1536347452.984 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-07T19:10:53.009Z,1536347453.009 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 1.000000 bool
2018-09-07T19:10:53.012Z,1536347453.012 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-07T19:10:53.016Z,1536347453.016 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-07T19:10:53.032Z,1536347453.032 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2018-09-07T19:10:53.044Z,1536347453.044 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-07T19:10:53.059Z,1536347453.059 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-07T19:10:53.074Z,1536347453.074 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-07T19:10:53.078Z,1536347453.078 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-07T19:10:53.090Z,1536347453.090 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-07T19:10:53.097Z,1536347453.097 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-07T19:10:53.100Z,1536347453.100 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-07T19:10:53.103Z,1536347453.103 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-07T19:10:53.107Z,1536347453.107 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-07T19:10:53.126Z,1536347453.126 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-07T19:10:53.129Z,1536347453.129 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-07T19:10:53.147Z,1536347453.147 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-07T19:10:53.150Z,1536347453.150 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-07T19:10:53.165Z,1536347453.165 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-07T19:10:53.169Z,1536347453.169 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-07T19:10:53.172Z,1536347453.172 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-07T19:10:53.175Z,1536347453.175 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-07T19:10:53.195Z,1536347453.195 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-07T19:10:53.198Z,1536347453.198 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-07T19:10:53.201Z,1536347453.201 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-07T19:10:53.204Z,1536347453.204 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-07T19:10:53.219Z,1536347453.219 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-07T19:10:53.256Z,1536347453.256 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T19:10:53.287Z,1536347453.287 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-07T19:10:53.316Z,1536347453.316 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T19:10:53.338Z,1536347453.338 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T19:10:53.359Z,1536347453.359 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-07T19:10:53.361Z,1536347453.361 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-07T19:10:53.362Z,1536347453.362 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-07T19:10:53.502Z,1536347453.502 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-07T19:10:53.506Z,1536347453.506 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-07T19:10:53.508Z,1536347453.508 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-07T19:10:53.511Z,1536347453.511 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-07T19:10:53.531Z,1536347453.531 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-07T19:10:53.538Z,1536347453.538 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-07T19:10:53.571Z,1536347453.571 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-07T19:10:53.581Z,1536347453.581 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-07T19:10:53.612Z,1536347453.612 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-07T19:10:53.676Z,1536347453.676 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-07T19:10:53.680Z,1536347453.680 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-07T19:10:53.698Z,1536347453.698 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-07T19:10:53.699Z,1536347453.699 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-07T19:10:53.719Z,1536347453.719 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-07T19:10:53.742Z,1536347453.742 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-07T19:10:53.780Z,1536347453.780 [sci2:I.Pitch](DEBUG): Construct.
2018-09-07T19:10:53.786Z,1536347453.786 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-07T19:10:53.788Z,1536347453.788 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-07T19:10:53.804Z,1536347453.804 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-07T19:10:53.839Z,1536347453.839 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-07T19:10:53.864Z,1536347453.864 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-07T19:10:53.905Z,1536347453.905 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:53.915Z,1536347453.915 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:53.939Z,1536347453.939 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:53.959Z,1536347453.959 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:53.966Z,1536347453.966 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:53.982Z,1536347453.982 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:54.006Z,1536347454.006 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T19:10:54.099Z,1536347454.099 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-07T19:10:54.100Z,1536347454.100 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-07T19:11:00.921Z,1536347460.921 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 4.000000 hour
2018-09-07T19:11:00.922Z,1536347460.922 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.983002 degree
2018-09-07T19:11:00.923Z,1536347460.923 [CommandLine](IMPORTANT): got command set sci2.Lon1 -122.519997 degree
2018-09-07T19:11:00.923Z,1536347460.923 [CommandLine](IMPORTANT): got command set sci2.YoYoMinDepth 5.000000 meter
2018-09-07T19:11:00.924Z,1536347460.924 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 50.000000 meter
2018-09-07T19:11:00.927Z,1536347460.927 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 60.000000 meter
2018-09-07T19:11:00.927Z,1536347460.927 [CommandLine](IMPORTANT): got command run 
2018-09-07T19:11:00.931Z,1536347460.931 [CommandLine](IMPORTANT): Running 
2018-09-07T19:11:01.047Z,1536347461.047 [Default] Stopped
2018-09-07T19:11:01.047Z,1536347461.047 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-07T19:11:01.047Z,1536347461.047 [Default:B.GoToSurface] Stopped
2018-09-07T19:11:01.047Z,1536347461.047 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T19:11:01.047Z,1536347461.047 [Default:CheckIn] Stopped
2018-09-07T19:11:01.047Z,1536347461.047 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-07T19:11:01.047Z,1536347461.047 [Default:CheckIn:C.Wait] Stopped
2018-09-07T19:11:01.047Z,1536347461.047 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-07T19:11:01.048Z,1536347461.048 [MissionManager](IMPORTANT): Started mission sci2
2018-09-07T19:11:01.048Z,1536347461.048 [sci2] Running Loop=1
2018-09-07T19:11:01.048Z,1536347461.048 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-07T19:11:01.048Z,1536347461.048 [sci2:Science] Running Loop=1
2018-09-07T19:11:01.048Z,1536347461.048 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-07T19:11:01.048Z,1536347461.048 [sci2:Science:A] Running Loop=1
2018-09-07T19:11:01.048Z,1536347461.048 [sci2:Science:B] Running Loop=1
2018-09-07T19:11:01.048Z,1536347461.048 [sci2:Science:C] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:D] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:E] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:F] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:G] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:Read_Oil] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T19:11:01.049Z,1536347461.049 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T19:11:01.051Z,1536347461.051 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-07T19:11:01.051Z,1536347461.051 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-07T19:11:01.052Z,1536347461.052 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-07T19:11:01.052Z,1536347461.052 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-07T19:11:01.052Z,1536347461.052 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-07T19:11:01.052Z,1536347461.052 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-07T19:11:01.053Z,1536347461.053 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T19:11:01.053Z,1536347461.053 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T19:11:01.054Z,1536347461.054 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-07T19:11:01.055Z,1536347461.055 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-07T19:11:01.055Z,1536347461.055 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T19:11:01.055Z,1536347461.055 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T19:11:01.069Z,1536347461.069 [sci2:StandardEnvelopes] Running Loop=1
2018-09-07T19:11:01.069Z,1536347461.069 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-07T19:11:01.069Z,1536347461.069 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-07T19:11:01.069Z,1536347461.069 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:I.Pitch] Running Loop=1
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:J.Buoyancy] Running Loop=1
2018-09-07T19:11:01.070Z,1536347461.070 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:K.SetSpeed] Running Loop=1
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-07T19:11:01.071Z,1536347461.071 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-07T19:11:01.072Z,1536347461.072 [sci2:N.YoYo] Running Loop=1
2018-09-07T19:11:01.072Z,1536347461.072 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-07T19:11:01.072Z,1536347461.072 [sci2:C] Running Loop=1
2018-09-07T19:11:01.073Z,1536347461.073 [sci2:N.YoYo] Running Loop=1
2018-09-07T19:11:01.078Z,1536347461.078 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-07T19:11:01.095Z,1536347461.095 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-07T19:11:01.109Z,1536347461.109 [sci2:K.SetSpeed] Running Loop=1
2018-09-07T19:11:01.118Z,1536347461.118 [sci2:J.Buoyancy] Running Loop=1
2018-09-07T19:11:01.127Z,1536347461.127 [sci2:I.Pitch] Running Loop=1
2018-09-07T19:11:01.141Z,1536347461.141 [sci2:StandardEnvelopes] Running Loop=1
2018-09-07T19:11:01.142Z,1536347461.142 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-07T19:11:01.152Z,1536347461.152 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-07T19:11:01.166Z,1536347461.166 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-07T19:11:01.177Z,1536347461.177 [sci2:C] Stopped
2018-09-07T19:11:01.177Z,1536347461.177 [sci2:E] Running Loop=1
2018-09-07T19:11:01.178Z,1536347461.178 [sci2:Science] Running Loop=1
2018-09-07T19:11:01.194Z,1536347461.194 [sci2:Science:PeakDetectOil] Stopped
2018-09-07T19:11:01.194Z,1536347461.194 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-07T19:11:01.194Z,1536347461.194 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-07T19:11:01.194Z,1536347461.194 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T19:11:01.194Z,1536347461.194 [sci2:Science:PeakDetectNO3] Stopped
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-07T19:11:01.195Z,1536347461.195 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-07T19:11:01.205Z,1536347461.205 [sci2:Science:Read_Oil] Stopped
2018-09-07T19:11:01.205Z,1536347461.205 [sci2:Science:G] Running Loop=1
2018-09-07T19:11:01.206Z,1536347461.206 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-07T19:11:01.207Z,1536347461.207 [sci2:Science:F] Stopped
2018-09-07T19:11:01.207Z,1536347461.207 [sci2:Science:E] Stopped
2018-09-07T19:11:01.207Z,1536347461.207 [sci2:Science:D] Running Loop=1
2018-09-07T19:11:01.208Z,1536347461.208 [sci2:Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2018-09-07T19:11:01.209Z,1536347461.209 [sci2:Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2018-09-07T19:11:01.211Z,1536347461.211 [sci2:Science:C] Running Loop=1
2018-09-07T19:11:01.211Z,1536347461.211 [sci2:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-07T19:11:01.212Z,1536347461.212 [sci2:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-07T19:11:01.218Z,1536347461.218 [sci2:Science:B] Stopped
2018-09-07T19:11:01.218Z,1536347461.218 [sci2:Science:A] Stopped
2018-09-07T19:11:01.372Z,1536347461.372 [sci2:E] Stopped
2018-09-07T19:11:01.372Z,1536347461.372 [sci2:F] Running Loop=1
2018-09-07T19:11:01.545Z,1536347461.545 [CTD_Seabird](INFO): Initializing
2018-09-07T19:11:01.546Z,1536347461.546 [CTD_Seabird](INFO): Checking LCM
2018-09-07T19:11:01.546Z,1536347461.546 [CTD_Seabird](INFO): LCM OK
2018-09-07T19:11:01.546Z,1536347461.546 [CTD_Seabird](INFO): Powering up
2018-09-07T19:11:01.661Z,1536347461.661 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2018-09-07T19:11:01.661Z,1536347461.661 [WetLabsBB2FL](INFO): Powering up
2018-09-07T19:11:01.795Z,1536347461.795 [sci2:F] Stopped
2018-09-07T19:11:01.795Z,1536347461.795 [sci2:G] Running Loop=1
2018-09-07T19:11:02.121Z,1536347462.121 [ThrusterServo](FAULT): getVelocity uart error serial timeout
2018-09-07T19:11:02.121Z,1536347462.121 [ThrusterServo](FAULT): Thruster uart error: serial timeout
2018-09-07T19:11:02.121Z,1536347462.121 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-07T19:11:02.121Z,1536347462.121 [ThrusterServo](ERROR): Communications Fault
2018-09-07T19:11:02.125Z,1536347462.125 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-07T19:11:02.271Z,1536347462.271 [sci2:G] Stopped
2018-09-07T19:11:02.271Z,1536347462.271 [sci2:StartingMission] Running Loop=1
2018-09-07T19:11:02.271Z,1536347462.271 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-07T19:11:02.370Z,1536347462.370 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-07T19:11:02.371Z,1536347462.371 [ThrusterServo](INFO): Powering down
2018-09-07T19:11:02.615Z,1536347462.615 [sci2:NeedComms] Running Loop=1
2018-09-07T19:11:02.616Z,1536347462.616 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T19:11:02.616Z,1536347462.616 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T19:11:02.616Z,1536347462.616 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T19:11:02.616Z,1536347462.616 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T19:11:02.621Z,1536347462.621 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T19:11:02.621Z,1536347462.621 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T19:11:02.622Z,1536347462.622 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T19:11:02.622Z,1536347462.622 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T19:11:02.622Z,1536347462.622 [sci2:NeedComms:A] Running Loop=1
2018-09-07T19:11:02.637Z,1536347462.637 [sci2:NeedComms:A](INFO): last time_fix was: 1536347240.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T19:11:02.643Z,1536347462.643 [sci2:NeedComms:A] Stopped
2018-09-07T19:11:03.010Z,1536347463.010 [sci2:NeedComms:C] Running Loop=1
2018-09-07T19:11:03.265Z,1536347463.265 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-07T19:11:03.265Z,1536347463.265 [ThrusterServo] No Fault, FailCount= 1
2018-09-07T19:11:03.409Z,1536347463.409 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-07T19:11:03.447Z,1536347463.447 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-07T19:11:03.453Z,1536347463.453 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-07T19:11:03.765Z,1536347463.765 [NAL9602](INFO): Powering up
2018-09-07T19:11:06.892Z,1536347466.892 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T19:11:07.032Z,1536347467.032 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-09-07T19:11:07.033Z,1536347467.033 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-09-07T19:11:14.959Z,1536347474.959 [NAL9602](INFO): NAL9602 initialized
2018-09-07T19:11:29.355Z,1536347489.355 [NAL9602](INFO): SBD MO Status=0, MOMSN=48543, MT Status=0, MTMSN=0
2018-09-07T19:11:29.355Z,1536347489.355 [NAL9602](INFO): No messages in MT queue
2018-09-07T19:12:29.988Z,1536347549.988 [CommandLine](IMPORTANT): got command gfscan
2018-09-07T19:12:30.125Z,1536347550.125 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-07T19:12:30.598Z,1536347550.598 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:30.600Z,1536347550.600 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:31.199Z,1536347551.199 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:31.201Z,1536347551.201 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:32.403Z,1536347552.403 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:32.404Z,1536347552.404 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:33.198Z,1536347553.198 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:33.199Z,1536347553.199 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:34.400Z,1536347554.400 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:34.402Z,1536347554.402 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:35.198Z,1536347555.198 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:35.199Z,1536347555.199 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:36.399Z,1536347556.399 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:36.400Z,1536347556.400 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:37.600Z,1536347557.600 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:37.603Z,1536347557.603 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:38.201Z,1536347558.201 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:38.203Z,1536347558.203 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:39.403Z,1536347559.403 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:39.404Z,1536347559.404 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:40.202Z,1536347560.202 [CTD_Seabird](INFO): Ground Fault scan is active; will mark data as invalid.
2018-09-07T19:12:40.203Z,1536347560.203 [CTD_Seabird](INFO): some bad data, not updating bins
2018-09-07T19:12:40.913Z,1536347560.913 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): 0.124633
CHAN A1 (24V): 0.181398
CHAN A2 (12V): -0.004745
CHAN A3 (5V): -0.003004
CHAN B0 (3.3V): -0.001546
CHAN B1 (3.15aV): -0.001141
CHAN B2 (3.15bV): -0.000882
CHAN B3 (GND): -0.000531
OPEN: 0.004397
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-07T19:14:20.407Z,1536347660.407 [CommandLine](IMPORTANT): got command get CBIT.gf24Offset
2018-09-07T19:14:20.408Z,1536347660.408 [CommandLine](IMPORTANT): CBIT.gf24Offset -28.000000 uA
2018-09-07T19:15:07.689Z,1536347707.689 [CommandLine](IMPORTANT): got command configSet CBIT.gf24Offset 180.000000 microampere persist
2018-09-07T19:15:53.968Z,1536347753.968 [CommandLine](IMPORTANT): got command show stack
2018-09-07T19:15:53.969Z,1536347753.969 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-07T19:15:53.970Z,1536347753.970 [sci2:Science](IMPORTANT): Priority 0: sci2:Science:C
2018-09-07T19:15:53.970Z,1536347753.970 [sci2:Science](IMPORTANT): Priority 1: sci2:Science:D
2018-09-07T19:15:53.971Z,1536347753.971 [sci2:Science](IMPORTANT): Priority 2: sci2:Science:G
2018-09-07T19:15:53.971Z,1536347753.971 [sci2:Science:PeakDetectChl](IMPORTANT): Priority 3: sci2:Science:PeakDetectChl:A.PeakDetectVsDepth
2018-09-07T19:15:53.971Z,1536347753.971 [sci2:NeedComms](IMPORTANT): Priority 4: sci2:NeedComms:B.GoToSurface
2018-09-07T19:15:53.972Z,1536347753.972 [sci2:NeedComms](IMPORTANT): Priority 5: sci2:NeedComms:C
2018-09-07T19:15:53.972Z,1536347753.972 [sci2:StandardEnvelopes](IMPORTANT): Priority 6: sci2:StandardEnvelopes:A.AltitudeEnvelope
2018-09-07T19:15:53.972Z,1536347753.972 [sci2:StandardEnvelopes](IMPORTANT): Priority 7: sci2:StandardEnvelopes:B.DepthEnvelope
2018-09-07T19:15:53.972Z,1536347753.972 [sci2:StandardEnvelopes](IMPORTANT): Priority 8: sci2:StandardEnvelopes:C.OffshoreEnvelope
2018-09-07T19:15:53.974Z,1536347753.974 [sci2](IMPORTANT): Priority 9: sci2:I.Pitch
2018-09-07T19:15:53.974Z,1536347753.974 [sci2](IMPORTANT): Priority 10: sci2:J.Buoyancy
2018-09-07T19:15:53.975Z,1536347753.975 [sci2](IMPORTANT): Priority 11: sci2:K.SetSpeed
2018-09-07T19:15:53.975Z,1536347753.975 [sci2](IMPORTANT): Priority 12: sci2:L.DepthEnvelope
2018-09-07T19:15:53.975Z,1536347753.975 [sci2](IMPORTANT): Priority 13: sci2:M.AltitudeEnvelope
2018-09-07T19:15:53.975Z,1536347753.975 [sci2](IMPORTANT): Priority 14: sci2:N.YoYo
2018-09-07T19:16:13.002Z,1536347773.002 [NAL9602](INFO): GPS fix at 20180907T191606: (36.987415, -122.420868)
2018-09-07T19:16:13.086Z,1536347773.086 [sci2:NeedComms:C] Stopped
2018-09-07T19:16:13.087Z,1536347773.087 [sci2:NeedComms:D] Running Loop=1
2018-09-07T19:16:13.454Z,1536347773.454 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-07T19:16:19.948Z,1536347779.948 [DataOverHttps](INFO): Sending 224 bytes from file Logs/20180907T190331/Courier0007.lzma
2018-09-07T19:16:21.537Z,1536347781.537 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Courier0007.lzma.bak
2018-09-07T19:16:21.537Z,1536347781.537 [DataOverHttps](INFO): SBD MOMSN=8491008
2018-09-07T19:16:35.799Z,1536347795.799 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180907T190331/Courier0010.lzma
2018-09-07T19:16:37.400Z,1536347797.400 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Courier0010.lzma.bak
2018-09-07T19:16:37.400Z,1536347797.400 [DataOverHttps](INFO): SBD MOMSN=8491044
2018-09-07T19:16:45.285Z,1536347805.285 [NAL9602](INFO): Powering down
2018-09-07T19:16:51.646Z,1536347811.646 [DataOverHttps](INFO): Sending 212 bytes from file Logs/20180907T190331/Express0005.lzma
2018-09-07T19:16:54.035Z,1536347814.035 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Express0005.lzma.bak
2018-09-07T19:16:54.035Z,1536347814.035 [DataOverHttps](INFO): SBD MOMSN=8491046
2018-09-07T19:17:08.240Z,1536347828.240 [DataOverHttps](INFO): Sending 1336 bytes from file Logs/20180907T190331/Express0008.lzma
2018-09-07T19:17:14.252Z,1536347834.252 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Express0008.lzma.bak
2018-09-07T19:17:14.252Z,1536347834.252 [DataOverHttps](INFO): SBD MOMSN=8491049
2018-09-07T19:17:29.652Z,1536347849.652 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180907T190331/Express0011.lzma
2018-09-07T19:17:32.847Z,1536347852.847 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Express0011.lzma.bak
2018-09-07T19:17:32.847Z,1536347852.847 [DataOverHttps](INFO): SBD MOMSN=8491088
2018-09-07T19:17:33.389Z,1536347853.389 [sci2:NeedComms:D] Stopped
2018-09-07T19:17:33.389Z,1536347853.389 [sci2:NeedComms:E] Running Loop=1
2018-09-07T19:17:33.709Z,1536347853.709 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-07T19:17:34.052Z,1536347854.052 [NAL9602](INFO): Powering up
2018-09-07T19:17:45.218Z,1536347865.218 [NAL9602](INFO): NAL9602 initialized
2018-09-07T19:18:07.240Z,1536347887.240 [NAL9602](INFO): SBD MO Status=2, MOMSN=48544, MT Status=2, MTMSN=0
2018-09-07T19:18:07.240Z,1536347887.240 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T19:18:18.025Z,1536347898.025 [NAL9602](INFO): SBD MO Status=0, MOMSN=48544, MT Status=0, MTMSN=0
2018-09-07T19:18:18.025Z,1536347898.025 [NAL9602](INFO): No messages in MT queue
2018-09-07T19:21:01.306Z,1536348061.306 [NAL9602](INFO): GPS fix at 20180907T192054: (36.987206, -122.420274)
2018-09-07T19:21:01.386Z,1536348061.386 [sci2:NeedComms:E] Stopped
2018-09-07T19:21:01.388Z,1536348061.388 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-07T19:21:01.388Z,1536348061.388 [sci2:NeedComms] Stopped
2018-09-07T19:21:01.388Z,1536348061.388 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T19:21:01.388Z,1536348061.388 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T19:21:01.388Z,1536348061.388 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T19:21:01.783Z,1536348061.783 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-07T19:21:01.783Z,1536348061.783 [sci2:StartingMission] Stopped
2018-09-07T19:21:01.783Z,1536348061.783 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-07T19:21:01.783Z,1536348061.783 [sci2:Lap] Running Loop=1
2018-09-07T19:21:01.783Z,1536348061.783 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-07T19:21:01.784Z,1536348061.784 [sci2:Lap:Wpt1] Running Loop=1
2018-09-07T19:21:01.784Z,1536348061.784 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-07T19:21:01.784Z,1536348061.784 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-07T19:21:01.784Z,1536348061.784 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T19:21:28.014Z,1536348088.014 [Radio_Surface](INFO): Powering down
2018-09-07T19:21:32.139Z,1536348092.139 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 2.00 mm (1 active estimators).
2018-09-07T19:21:33.702Z,1536348093.702 [NAL9602](INFO): Powering down
2018-09-07T19:22:04.499Z,1536348124.499 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:23:04.904Z,1536348184.904 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:23:31.348Z,1536348211.348 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.01 from mean 14.90 degC, variance 0.00 degC^2, standard deviation 0.02 degC, and samples: (5.00 m, 14.92 degC), (10.00 m, 14.91 degC), (20.00 m, 14.90 degC), (30.00 m, 14.88 degC)
2018-09-07T19:23:31.349Z,1536348211.349 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:23:42.502Z,1536348222.502 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.004410
2018-09-07T19:24:16.126Z,1536348256.126 [DAT](FAULT): unknown deviceResponse_:  stats CRC:Fail SNR:06.3 CCERR:005

2018-09-07T19:24:16.127Z,1536348256.127 [DAT] Communications Fault, FailCount= 1
2018-09-07T19:24:16.127Z,1536348256.127 [DAT](ERROR): Communications Fault
2018-09-07T19:24:16.298Z,1536348256.298 [CBIT](ERROR): Communications Fault in component: DAT
2018-09-07T19:24:16.530Z,1536348256.530 [DAT](INFO): Powering down
2018-09-07T19:24:17.422Z,1536348257.422 [CBIT](INFO): Clearing failed state for component DAT
2018-09-07T19:24:17.422Z,1536348257.422 [DAT] No Fault, FailCount= 1
2018-09-07T19:24:19.729Z,1536348259.729 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2018-09-07T19:24:19.729Z,1536348259.729 [DAT](INFO): Powering up
2018-09-07T19:24:19.729Z,1536348259.729 [DAT](DEBUG): Initializing DAT.
2018-09-07T19:24:19.771Z,1536348259.771 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2018-09-07T19:24:34.128Z,1536348274.128 [DAT](INFO): setting local address to 6
2018-09-07T19:24:34.532Z,1536348274.532 [DAT](INFO): set local address to 6
2018-09-07T19:24:43.355Z,1536348283.355 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 2.00 mm (2 active estimators).
2018-09-07T19:25:05.703Z,1536348305.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:26:05.306Z,1536348365.306 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:27:05.703Z,1536348425.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:27:16.532Z,1536348436.532 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.19 from mean 13.92 degC, variance 0.05 degC^2, standard deviation 0.23 degC, and samples: (5.00 m, 14.15 degC), (10.00 m, 14.07 degC), (20.00 m, 13.93 degC), (30.00 m, 13.55 degC)
2018-09-07T19:27:16.549Z,1536348436.549 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:28:06.097Z,1536348486.097 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:28:56.936Z,1536348536.936 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 14.43 degC, variance 0.03 degC^2, standard deviation 0.18 degC, and samples: (5.00 m, 14.18 degC), (10.00 m, 14.32 degC), (20.00 m, 14.57 degC), (30.00 m, 14.63 degC)
2018-09-07T19:28:56.937Z,1536348536.937 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:29:06.099Z,1536348546.099 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:30:06.102Z,1536348606.102 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:31:06.899Z,1536348666.899 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:32:06.903Z,1536348726.903 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:32:39.332Z,1536348759.332 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.22 from mean 13.86 degC, variance 0.07 degC^2, standard deviation 0.27 degC, and samples: (5.00 m, 14.13 degC), (10.00 m, 14.02 degC), (20.00 m, 13.88 degC), (30.00 m, 13.42 degC)
2018-09-07T19:32:39.333Z,1536348759.333 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:33:07.699Z,1536348787.699 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:34:07.699Z,1536348847.699 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:34:24.143Z,1536348864.143 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.21 from mean 14.44 degC, variance 0.05 degC^2, standard deviation 0.22 degC, and samples: (5.00 m, 14.14 degC), (10.00 m, 14.31 degC), (20.00 m, 14.61 degC), (30.00 m, 14.68 degC)
2018-09-07T19:34:24.144Z,1536348864.144 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:35:07.703Z,1536348907.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:36:08.505Z,1536348968.505 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:37:08.902Z,1536349028.902 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:38:05.747Z,1536349085.747 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.36 from mean 13.96 degC, variance 0.17 degC^2, standard deviation 0.41 degC, and samples: (5.00 m, 14.38 degC), (10.00 m, 14.27 degC), (20.00 m, 13.87 degC), (30.00 m, 13.33 degC)
2018-09-07T19:38:05.748Z,1536349085.748 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:38:09.299Z,1536349089.299 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:39:08.903Z,1536349148.903 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:39:52.136Z,1536349192.136 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.12 from mean 14.58 degC, variance 0.02 degC^2, standard deviation 0.14 degC, and samples: (5.00 m, 14.36 degC), (10.00 m, 14.55 degC), (20.00 m, 14.69 degC), (30.00 m, 14.72 degC)
2018-09-07T19:39:52.137Z,1536349192.137 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:40:08.908Z,1536349208.908 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:41:09.303Z,1536349269.303 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:42:09.721Z,1536349329.721 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:43:10.099Z,1536349390.099 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:43:35.336Z,1536349415.336 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.43 from mean 13.86 degC, variance 0.21 degC^2, standard deviation 0.46 degC, and samples: (5.00 m, 14.32 degC), (10.00 m, 14.25 degC), (20.00 m, 13.67 degC), (30.00 m, 13.20 degC)
2018-09-07T19:43:35.353Z,1536349415.353 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:44:10.503Z,1536349450.503 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:45:10.904Z,1536349510.904 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:45:20.550Z,1536349520.550 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.09 from mean 14.58 degC, variance 0.01 degC^2, standard deviation 0.11 degC, and samples: (5.00 m, 14.41 degC), (10.00 m, 14.58 degC), (20.00 m, 14.66 degC), (30.00 m, 14.68 degC)
2018-09-07T19:45:20.550Z,1536349520.550 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:46:10.902Z,1536349570.902 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:47:11.307Z,1536349631.307 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:48:12.098Z,1536349692.098 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:49:00.543Z,1536349740.543 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.32 from mean 13.69 degC, variance 0.15 degC^2, standard deviation 0.38 degC, and samples: (5.00 m, 14.11 degC), (10.00 m, 13.92 degC), (20.00 m, 13.63 degC), (30.00 m, 13.10 degC)
2018-09-07T19:49:00.544Z,1536349740.544 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:49:11.703Z,1536349751.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:50:12.103Z,1536349812.103 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:50:44.136Z,1536349844.136 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.14 from mean 14.51 degC, variance 0.03 degC^2, standard deviation 0.17 degC, and samples: (5.00 m, 14.25 degC), (10.00 m, 14.49 degC), (20.00 m, 14.64 degC), (30.00 m, 14.66 degC)
2018-09-07T19:50:44.137Z,1536349844.137 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:51:12.103Z,1536349872.103 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:52:12.105Z,1536349932.105 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:53:12.500Z,1536349992.500 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:54:13.304Z,1536350053.304 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:54:25.333Z,1536350065.333 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.40 from mean 13.55 degC, variance 0.19 degC^2, standard deviation 0.43 degC, and samples: (5.00 m, 14.01 degC), (10.00 m, 13.88 degC), (20.00 m, 13.39 degC), (30.00 m, 12.91 degC)
2018-09-07T19:54:25.334Z,1536350065.334 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:55:13.296Z,1536350113.296 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:56:12.530Z,1536350172.530 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 14.41 degC, variance 0.04 degC^2, standard deviation 0.19 degC, and samples: (5.00 m, 14.11 degC), (10.00 m, 14.37 degC), (20.00 m, 14.55 degC), (30.00 m, 14.60 degC)
2018-09-07T19:56:12.531Z,1536350172.531 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T19:56:13.299Z,1536350173.299 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:57:13.699Z,1536350233.699 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:58:13.708Z,1536350293.708 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:59:14.499Z,1536350354.499 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T19:59:47.738Z,1536350387.738 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.46 from mean 13.39 degC, variance 0.23 degC^2, standard deviation 0.48 degC, and samples: (5.00 m, 14.02 degC), (10.00 m, 13.69 degC), (20.00 m, 13.04 degC), (30.00 m, 12.83 degC)
2018-09-07T19:59:47.738Z,1536350387.738 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:00:14.503Z,1536350414.503 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:01:14.910Z,1536350474.910 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:01:34.946Z,1536350494.946 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.09 from mean 14.33 degC, variance 0.01 degC^2, standard deviation 0.12 degC, and samples: (5.00 m, 14.15 degC), (10.00 m, 14.35 degC), (20.00 m, 14.49 degC), (30.00 m, 14.34 degC)
2018-09-07T20:01:34.947Z,1536350494.947 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:02:14.914Z,1536350534.914 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:03:14.912Z,1536350594.912 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:04:15.307Z,1536350655.307 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:05:15.703Z,1536350715.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:05:16.552Z,1536350716.552 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.52 from mean 13.47 degC, variance 0.29 degC^2, standard deviation 0.54 degC, and samples: (5.00 m, 14.08 degC), (10.00 m, 13.89 degC), (20.00 m, 13.16 degC), (30.00 m, 12.75 degC)
2018-09-07T20:05:16.553Z,1536350716.553 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:05:54.135Z,1536350754.135 [DAT](FAULT): unknown deviceResponse_: eader stats CRC:Fail SNR:05.9 CCERR:005

2018-09-07T20:05:54.135Z,1536350754.135 [DAT] Communications Fault, FailCount= 1
2018-09-07T20:05:54.135Z,1536350754.135 [DAT](ERROR): Communications Fault
2018-09-07T20:05:54.286Z,1536350754.286 [CBIT](ERROR): Communications Fault in component: DAT
2018-09-07T20:05:54.539Z,1536350754.539 [DAT](INFO): Powering down
2018-09-07T20:05:54.930Z,1536350754.930 [DAT](FAULT): LCB fault:  Software Overcurrent.
2018-09-07T20:05:54.930Z,1536350754.930 [DAT] Hardware Fault, FailCount= 1
2018-09-07T20:05:54.930Z,1536350754.930 [DAT](ERROR): Hardware Fault
2018-09-07T20:05:55.429Z,1536350755.429 [CBIT](INFO): Clearing failed state for component DAT
2018-09-07T20:05:55.429Z,1536350755.429 [DAT] No Fault, FailCount= 1
2018-09-07T20:05:57.736Z,1536350757.736 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2018-09-07T20:05:57.736Z,1536350757.736 [DAT](INFO): Powering up
2018-09-07T20:05:57.736Z,1536350757.736 [DAT](DEBUG): Initializing DAT.
2018-09-07T20:05:57.785Z,1536350757.785 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2018-09-07T20:06:12.145Z,1536350772.145 [DAT](INFO): setting local address to 6
2018-09-07T20:06:12.554Z,1536350772.554 [DAT](INFO): set local address to 6
2018-09-07T20:06:15.708Z,1536350775.708 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:07:04.148Z,1536350824.148 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.11 from mean 14.41 degC, variance 0.02 degC^2, standard deviation 0.13 degC, and samples: (5.00 m, 14.22 degC), (10.00 m, 14.39 degC), (20.00 m, 14.55 degC), (30.00 m, 14.50 degC)
2018-09-07T20:07:04.153Z,1536350824.153 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:07:16.507Z,1536350836.507 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:08:16.507Z,1536350896.507 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:09:02.541Z,1536350942.541 [DAT](FAULT): unknown deviceResponse_: R:49.8 MPD:03.4 SPD:+07.8

2018-09-07T20:09:02.541Z,1536350942.541 [DAT] Communications Fault, FailCount= 1
2018-09-07T20:09:02.541Z,1536350942.541 [DAT](ERROR): Communications Fault
2018-09-07T20:09:02.793Z,1536350942.793 [CBIT](ERROR): Communications Fault in component: DAT
2018-09-07T20:09:02.922Z,1536350942.922 [DAT](INFO): Powering down
2018-09-07T20:09:03.813Z,1536350943.813 [CBIT](INFO): Clearing failed state for component DAT
2018-09-07T20:09:03.813Z,1536350943.813 [DAT] No Fault, FailCount= 1
2018-09-07T20:09:06.137Z,1536350946.137 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2018-09-07T20:09:06.137Z,1536350946.137 [DAT](INFO): Powering up
2018-09-07T20:09:06.137Z,1536350946.137 [DAT](DEBUG): Initializing DAT.
2018-09-07T20:09:06.154Z,1536350946.154 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2018-09-07T20:09:16.506Z,1536350956.506 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:09:20.526Z,1536350960.526 [DAT](INFO): setting local address to 6
2018-09-07T20:09:20.944Z,1536350960.944 [DAT](INFO): set local address to 6
2018-09-07T20:10:16.910Z,1536351016.910 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:10:46.146Z,1536351046.146 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.43 from mean 13.48 degC, variance 0.21 degC^2, standard deviation 0.46 degC, and samples: (5.00 m, 13.97 degC), (10.00 m, 13.86 degC), (20.00 m, 13.29 degC), (30.00 m, 12.82 degC)
2018-09-07T20:10:46.147Z,1536351046.147 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:11:16.903Z,1536351076.903 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:12:17.311Z,1536351137.311 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:12:30.938Z,1536351150.938 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.19 from mean 14.44 degC, variance 0.05 degC^2, standard deviation 0.23 degC, and samples: (5.00 m, 14.08 degC), (10.00 m, 14.40 degC), (20.00 m, 14.59 degC), (30.00 m, 14.68 degC)
2018-09-07T20:12:30.939Z,1536351150.939 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:13:17.703Z,1536351197.703 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:14:18.103Z,1536351258.103 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:15:18.114Z,1536351318.114 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:16:15.739Z,1536351375.739 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.46 from mean 13.70 degC, variance 0.27 degC^2, standard deviation 0.52 degC, and samples: (5.00 m, 14.29 degC), (10.00 m, 14.02 degC), (20.00 m, 13.55 degC), (30.00 m, 12.93 degC)
2018-09-07T20:16:15.740Z,1536351375.740 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:16:18.515Z,1536351378.515 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:17:18.910Z,1536351438.910 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:18:02.954Z,1536351482.954 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.14 from mean 14.54 degC, variance 0.03 degC^2, standard deviation 0.16 degC, and samples: (5.00 m, 14.29 degC), (10.00 m, 14.49 degC), (20.00 m, 14.67 degC), (30.00 m, 14.69 degC)
2018-09-07T20:18:02.955Z,1536351482.955 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:18:19.311Z,1536351499.311 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:19:19.311Z,1536351559.311 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:20:19.707Z,1536351619.707 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:21:01.375Z,1536351661.375 [sci2:NeedComms] Running Loop=1
2018-09-07T20:21:01.375Z,1536351661.375 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T20:21:01.375Z,1536351661.375 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T20:21:01.375Z,1536351661.375 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T20:21:01.376Z,1536351661.376 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T20:21:01.376Z,1536351661.376 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T20:21:01.381Z,1536351661.381 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T20:21:01.381Z,1536351661.381 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T20:21:01.382Z,1536351661.382 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T20:21:01.382Z,1536351661.382 [sci2:NeedComms:A] Running Loop=1
2018-09-07T20:21:01.384Z,1536351661.384 [sci2:NeedComms:A](INFO): last time_fix was: 1536348054.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T20:21:01.384Z,1536351661.384 [sci2:NeedComms:A] Stopped
2018-09-07T20:21:19.823Z,1536351679.823 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:21:47.864Z,1536351707.864 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.59 from mean 13.58 degC, variance 0.39 degC^2, standard deviation 0.62 degC, and samples: (5.00 m, 14.29 degC), (10.00 m, 14.06 degC), (20.00 m, 13.25 degC), (30.00 m, 12.74 degC)
2018-09-07T20:21:47.865Z,1536351707.865 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:21:57.892Z,1536351717.892 [sci2:NeedComms:C] Running Loop=1
2018-09-07T20:21:58.290Z,1536351718.290 [Radio_Surface](INFO): Powering up
2018-09-07T20:21:58.633Z,1536351718.633 [NAL9602](INFO): Powering up
2018-09-07T20:22:09.577Z,1536351729.577 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:22:19.975Z,1536351739.975 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:22:30.375Z,1536351750.375 [NAL9602](INFO): SBD MO Status=0, MOMSN=48545, MT Status=0, MTMSN=0
2018-09-07T20:22:30.375Z,1536351750.375 [NAL9602](INFO): No messages in MT queue
2018-09-07T20:23:20.372Z,1536351800.372 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:23:39.224Z,1536351819.224 [DAT](FAULT): unknown deviceResponse_: 8 MPD:00.0 SPD:+00.0

2018-09-07T20:23:39.224Z,1536351819.224 [DAT] Communications Fault, FailCount= 1
2018-09-07T20:23:39.224Z,1536351819.224 [DAT](ERROR): Communications Fault
2018-09-07T20:23:39.357Z,1536351819.357 [CBIT](ERROR): Communications Fault in component: DAT
2018-09-07T20:23:39.607Z,1536351819.607 [DAT](INFO): Powering down
2018-09-07T20:23:40.565Z,1536351820.565 [CBIT](INFO): Clearing failed state for component DAT
2018-09-07T20:23:40.565Z,1536351820.565 [DAT] No Fault, FailCount= 1
2018-09-07T20:23:42.808Z,1536351822.808 [DAT](INFO): Powered 24V power converter LCB with command: ! echo 1 > /dev/loadB2
2018-09-07T20:23:42.808Z,1536351822.808 [DAT](INFO): Powering up
2018-09-07T20:23:42.808Z,1536351822.808 [DAT](DEBUG): Initializing DAT.
2018-09-07T20:23:42.898Z,1536351822.898 [CommandLine](IMPORTANT): got command ! echo 1 > /dev/loadB2
2018-09-07T20:23:57.219Z,1536351837.219 [DAT](INFO): setting local address to 6
2018-09-07T20:23:57.606Z,1536351837.606 [DAT](INFO): set local address to 6
2018-09-07T20:24:20.381Z,1536351860.381 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:25:20.779Z,1536351920.779 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:26:20.771Z,1536351980.771 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:27:12.774Z,1536352032.774 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-07T20:27:12.774Z,1536352032.774 [NAL9602] Data Fault, FailCount= 1
2018-09-07T20:27:12.775Z,1536352032.775 [NAL9602](ERROR): Data Fault
2018-09-07T20:27:12.891Z,1536352032.891 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-07T20:27:13.211Z,1536352033.211 [NAL9602](INFO): Powering down
2018-09-07T20:27:14.081Z,1536352034.081 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-07T20:27:14.081Z,1536352034.081 [NAL9602] No Fault, FailCount= 1
2018-09-07T20:27:21.191Z,1536352041.191 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:27:43.578Z,1536352063.578 [NAL9602](INFO): Powering up NAL9602
2018-09-07T20:27:56.292Z,1536352076.292 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:27:57.083Z,1536352077.083 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002780
2018-09-07T20:28:58.246Z,1536352138.246 [sci2:NeedComms:C](INFO): Timed out from 2018-09-07T20:21:57.9Z
2018-09-07T20:28:58.247Z,1536352138.247 [sci2:NeedComms:C:A_Timeout] Running Loop=1
2018-09-07T20:28:58.247Z,1536352138.247 [sci2:NeedComms:C:A_Timeout](DEBUG): Aggregate::initialize sci2:NeedComms:C:A_Timeout
2018-09-07T20:28:58.247Z,1536352138.247 [sci2:NeedComms:C:A_Timeout:A] Running Loop=1
2018-09-07T20:28:58.247Z,1536352138.247 [sci2:NeedComms:C:A_Timeout:A](IMPORTANT): first GPS update timeout
2018-09-07T20:28:58.250Z,1536352138.250 [sci2:NeedComms:C:A_Timeout:A] Stopped
2018-09-07T20:28:58.250Z,1536352138.250 [sci2:NeedComms:C:A_Timeout](INFO): Completed sci2:NeedComms:C:A_Timeout
2018-09-07T20:28:58.250Z,1536352138.250 [sci2:NeedComms:C] Stopped
2018-09-07T20:28:58.250Z,1536352138.250 [sci2:NeedComms:D] Running Loop=1
2018-09-07T20:29:04.151Z,1536352144.151 [DataOverHttps](INFO): Sending 80 bytes from file Logs/20180907T190331/Courier0013.lzma
2018-09-07T20:29:05.332Z,1536352145.332 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Courier0013.lzma.bak
2018-09-07T20:29:05.332Z,1536352145.332 [DataOverHttps](INFO): SBD MOMSN=8491349
2018-09-07T20:29:17.660Z,1536352157.660 [DataOverHttps](INFO): Sending 3188 bytes from file Logs/20180907T190331/Express0014.lzma
2018-09-07T20:29:20.441Z,1536352160.441 [DataOverHttps](INFO): Moved sent file to Logs/20180907T190331/Express0014.lzma.bak
2018-09-07T20:29:20.441Z,1536352160.441 [DataOverHttps](INFO): SBD MOMSN=8491355
2018-09-07T20:29:20.963Z,1536352160.963 [sci2:NeedComms:D] Stopped
2018-09-07T20:29:20.963Z,1536352160.963 [sci2:NeedComms:E] Running Loop=1
2018-09-07T20:32:57.658Z,1536352377.658 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-07T20:32:57.658Z,1536352377.658 [NAL9602] Data Fault, FailCount= 2
2018-09-07T20:32:57.659Z,1536352377.659 [NAL9602](ERROR): Data Fault
2018-09-07T20:32:57.767Z,1536352377.767 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-07T20:32:58.065Z,1536352378.065 [NAL9602](INFO): Powering down
2018-09-07T20:32:58.948Z,1536352378.948 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-07T20:32:58.948Z,1536352378.948 [NAL9602] No Fault, FailCount= 2
2018-09-07T20:33:28.456Z,1536352408.456 [NAL9602](INFO): Powering up NAL9602
2018-09-07T20:33:39.646Z,1536352419.646 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:36:21.208Z,1536352581.208 [sci2:NeedComms:E](INFO): Timed out from 2018-09-07T20:29:20.0Z
2018-09-07T20:36:21.208Z,1536352581.208 [sci2:NeedComms:E:A_Timeout] Running Loop=1
2018-09-07T20:36:21.208Z,1536352581.208 [sci2:NeedComms:E:A_Timeout](DEBUG): Aggregate::initialize sci2:NeedComms:E:A_Timeout
2018-09-07T20:36:21.208Z,1536352581.208 [sci2:NeedComms:E:A_Timeout:A] Running Loop=1
2018-09-07T20:36:21.213Z,1536352581.213 [sci2:NeedComms:E:A_Timeout:A](IMPORTANT): second GPS update timeout
2018-09-07T20:36:21.214Z,1536352581.214 [sci2:NeedComms:E:A_Timeout:A] Stopped
2018-09-07T20:36:21.215Z,1536352581.215 [sci2:NeedComms:E:A_Timeout](INFO): Completed sci2:NeedComms:E:A_Timeout
2018-09-07T20:36:21.215Z,1536352581.215 [sci2:NeedComms:E] Stopped
2018-09-07T20:36:21.216Z,1536352581.216 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-07T20:36:21.216Z,1536352581.216 [sci2:NeedComms] Stopped
2018-09-07T20:36:21.216Z,1536352581.216 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T20:36:21.216Z,1536352581.216 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T20:36:21.216Z,1536352581.216 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T20:36:21.563Z,1536352581.563 [sci2:NeedComms] Running Loop=1
2018-09-07T20:36:21.563Z,1536352581.563 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T20:36:21.563Z,1536352581.563 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T20:36:21.564Z,1536352581.564 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T20:36:21.564Z,1536352581.564 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T20:36:21.564Z,1536352581.564 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T20:36:21.569Z,1536352581.569 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T20:36:21.569Z,1536352581.569 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T20:36:21.570Z,1536352581.570 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T20:36:21.570Z,1536352581.570 [sci2:NeedComms:A] Running Loop=1
2018-09-07T20:36:21.571Z,1536352581.571 [sci2:NeedComms:A](INFO): last time_fix was: 1536348054.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T20:36:21.572Z,1536352581.572 [sci2:NeedComms:A] Stopped
2018-09-07T20:36:21.952Z,1536352581.952 [sci2:NeedComms:C] Running Loop=1
2018-09-07T20:38:42.814Z,1536352722.814 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-07T20:38:42.814Z,1536352722.814 [NAL9602] Data Fault, FailCount= 3
2018-09-07T20:38:42.814Z,1536352722.814 [NAL9602](ERROR): Data Fault
2018-09-07T20:38:42.973Z,1536352722.973 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-07T20:38:43.217Z,1536352723.217 [NAL9602](INFO): Powering down
2018-09-07T20:38:44.097Z,1536352724.097 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-07T20:38:44.097Z,1536352724.097 [NAL9602] No Fault, FailCount= 3
2018-09-07T20:39:13.610Z,1536352753.610 [NAL9602](INFO): Powering up NAL9602
2018-09-07T20:39:24.420Z,1536352764.420 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:43:22.103Z,1536353002.103 [sci2:NeedComms:C](INFO): Timed out from 2018-09-07T20:36:21.0Z
2018-09-07T20:43:22.103Z,1536353002.103 [sci2:NeedComms:C:A_Timeout] Running Loop=1
2018-09-07T20:43:22.103Z,1536353002.103 [sci2:NeedComms:C:A_Timeout](DEBUG): Aggregate::initialize sci2:NeedComms:C:A_Timeout
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:C:A_Timeout:A] Running Loop=1
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:C:A_Timeout:A](IMPORTANT): first GPS update timeout
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:C:A_Timeout:A] Stopped
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:C:A_Timeout](INFO): Completed sci2:NeedComms:C:A_Timeout
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:C] Stopped
2018-09-07T20:43:22.104Z,1536353002.104 [sci2:NeedComms:D] Running Loop=1
2018-09-07T20:43:53.235Z,1536353033.235 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:43:54.835Z,1536353034.835 [NAL9602](INFO): Powering down
2018-09-07T20:44:24.023Z,1536353064.023 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:44:54.439Z,1536353094.439 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:45:25.236Z,1536353125.236 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:45:31.226Z,1536353131.226 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.402252
2018-09-07T20:45:31.228Z,1536353131.228 [NAL9602](INFO): Powering up
2018-09-07T20:45:42.428Z,1536353142.428 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:45:58.211Z,1536353158.211 [NAL9602](INFO): SBD MO Status=1, MOMSN=48546, MT Status=0, MTMSN=0
2018-09-07T20:45:58.261Z,1536353158.261 [NAL9602](INFO): Sent 25 bytes from file Logs/20180907T190331/Courier0016.lzma
2018-09-07T20:45:58.261Z,1536353158.261 [NAL9602](INFO): Packets left to send: 0
2018-09-07T20:45:58.263Z,1536353158.263 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0016.lzma.parts/0000.sbd
2018-09-07T20:45:58.263Z,1536353158.263 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0016.lzma
2018-09-07T20:46:01.978Z,1536353161.978 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:46:10.779Z,1536353170.779 [NAL9602](INFO): SBD MO Status=1, MOMSN=48547, MT Status=0, MTMSN=0
2018-09-07T20:46:10.832Z,1536353170.832 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0017.lzma
2018-09-07T20:46:10.832Z,1536353170.832 [NAL9602](INFO): Packets left to send: 1
2018-09-07T20:46:10.837Z,1536353170.837 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0017.lzma.parts/0001.sbd
2018-09-07T20:46:24.146Z,1536353184.146 [NAL9602](INFO): SBD MO Status=1, MOMSN=48548, MT Status=0, MTMSN=0
2018-09-07T20:46:24.198Z,1536353184.198 [NAL9602](INFO): Sent 156 bytes from file Logs/20180907T190331/Express0017.lzma
2018-09-07T20:46:24.198Z,1536353184.198 [NAL9602](INFO): Packets left to send: 0
2018-09-07T20:46:24.199Z,1536353184.199 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0017.lzma.parts/0000.sbd
2018-09-07T20:46:24.200Z,1536353184.200 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0017.lzma
2018-09-07T20:46:35.735Z,1536353195.735 [NAL9602](INFO): SBD MO Status=0, MOMSN=48549, MT Status=0, MTMSN=0
2018-09-07T20:46:35.859Z,1536353195.859 [sci2:NeedComms:D] Stopped
2018-09-07T20:46:35.859Z,1536353195.859 [sci2:NeedComms:E] Running Loop=1
2018-09-07T20:46:37.734Z,1536353197.734 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-07T20:46:37.734Z,1536353197.734 [NAL9602] Data Fault, FailCount= 4
2018-09-07T20:46:37.734Z,1536353197.734 [NAL9602](ERROR): Data Fault
2018-09-07T20:46:37.837Z,1536353197.837 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-07T20:46:38.138Z,1536353198.138 [NAL9602](INFO): Powering down
2018-09-07T20:46:39.040Z,1536353199.040 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-07T20:46:39.045Z,1536353199.045 [NAL9602] No Fault, FailCount= 4
2018-09-07T20:47:01.736Z,1536353221.736 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:47:08.539Z,1536353228.539 [NAL9602](INFO): Powering up NAL9602
2018-09-07T20:47:19.736Z,1536353239.736 [NAL9602](INFO): NAL9602 initialized
2018-09-07T20:48:02.143Z,1536353282.143 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:49:02.138Z,1536353342.138 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:50:02.527Z,1536353402.527 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:51:00.940Z,1536353460.940 [NAL9602](INFO): GPS fix at 20180907T205054: (36.980666, -122.451158)
2018-09-07T20:51:01.003Z,1536353461.003 [UniversalFixResidualReporter](INFO): Fix residual: 25.1 %DT, over the last 3449.3 m. Residual distance 866.5 m at bearing -51.1 degrees. Fix at (36.9807, -122.4512) with 2838.0 m made good.
2018-09-07T20:51:01.018Z,1536353461.018 [sci2:NeedComms:E] Stopped
2018-09-07T20:51:01.020Z,1536353461.020 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-07T20:51:01.020Z,1536353461.020 [sci2:NeedComms] Stopped
2018-09-07T20:51:01.020Z,1536353461.020 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T20:51:01.020Z,1536353461.020 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T20:51:01.020Z,1536353461.020 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T20:51:02.537Z,1536353462.537 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:51:17.710Z,1536353477.710 [Radio_Surface](INFO): Powering down
2018-09-07T20:51:33.353Z,1536353493.353 [NAL9602](INFO): Powering down
2018-09-07T20:52:02.555Z,1536353522.555 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:53:02.947Z,1536353582.947 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:53:19.799Z,1536353599.799 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.02 from mean 15.20 degC, variance 0.00 degC^2, standard deviation 0.02 degC, and samples: (5.00 m, 15.22 degC), (10.00 m, 15.21 degC), (20.00 m, 15.21 degC), (30.00 m, 15.17 degC)
2018-09-07T20:53:19.799Z,1536353599.799 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:54:02.951Z,1536353642.951 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:55:02.951Z,1536353702.951 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:56:03.355Z,1536353763.355 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:56:58.590Z,1536353818.590 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.24 from mean 13.97 degC, variance 0.08 degC^2, standard deviation 0.28 degC, and samples: (5.00 m, 14.27 degC), (10.00 m, 14.16 degC), (20.00 m, 13.93 degC), (30.00 m, 13.53 degC)
2018-09-07T20:56:58.591Z,1536353818.591 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:57:03.351Z,1536353823.351 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:58:03.747Z,1536353883.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T20:58:42.993Z,1536353922.993 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.22 from mean 14.62 degC, variance 0.05 degC^2, standard deviation 0.22 degC, and samples: (5.00 m, 14.35 degC), (10.00 m, 14.46 degC), (20.00 m, 14.79 degC), (30.00 m, 14.89 degC)
2018-09-07T20:58:42.994Z,1536353922.994 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T20:59:03.751Z,1536353943.751 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:00:04.551Z,1536354004.551 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:01:04.551Z,1536354064.551 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:02:04.554Z,1536354124.554 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:02:21.800Z,1536354141.800 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.44 from mean 13.80 degC, variance 0.22 degC^2, standard deviation 0.47 degC, and samples: (5.00 m, 14.28 degC), (10.00 m, 14.21 degC), (20.00 m, 13.58 degC), (30.00 m, 13.14 degC)
2018-09-07T21:02:21.801Z,1536354141.801 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:03:04.568Z,1536354184.568 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:04:04.556Z,1536354244.556 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:04:12.995Z,1536354252.995 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 14.60 degC, variance 0.04 degC^2, standard deviation 0.20 degC, and samples: (5.00 m, 14.31 degC), (10.00 m, 14.56 degC), (20.00 m, 14.71 degC), (30.00 m, 14.84 degC)
2018-09-07T21:04:12.995Z,1536354252.995 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:05:04.951Z,1536354304.951 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:06:05.352Z,1536354365.352 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:07:05.758Z,1536354425.758 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:07:59.790Z,1536354479.790 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.54 from mean 13.70 degC, variance 0.34 degC^2, standard deviation 0.59 degC, and samples: (5.00 m, 14.35 degC), (10.00 m, 14.15 degC), (20.00 m, 13.45 degC), (30.00 m, 12.87 degC)
2018-09-07T21:07:59.790Z,1536354479.790 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:08:05.751Z,1536354485.751 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:09:05.758Z,1536354545.758 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:09:45.004Z,1536354585.004 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.09 from mean 14.64 degC, variance 0.01 degC^2, standard deviation 0.11 degC, and samples: (5.00 m, 14.46 degC), (10.00 m, 14.63 degC), (20.00 m, 14.74 degC), (30.00 m, 14.71 degC)
2018-09-07T21:09:45.005Z,1536354585.005 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:10:05.762Z,1536354605.762 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:11:06.171Z,1536354666.171 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:12:06.164Z,1536354726.164 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:13:06.551Z,1536354786.551 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:13:29.406Z,1536354809.406 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.55 from mean 13.83 degC, variance 0.37 degC^2, standard deviation 0.61 degC, and samples: (5.00 m, 14.45 degC), (10.00 m, 14.31 degC), (20.00 m, 13.63 degC), (30.00 m, 12.93 degC)
2018-09-07T21:13:29.407Z,1536354809.407 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:14:06.551Z,1536354846.551 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:15:06.550Z,1536354906.550 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:15:15.808Z,1536354915.808 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.14 from mean 14.70 degC, variance 0.03 degC^2, standard deviation 0.17 degC, and samples: (5.00 m, 14.45 degC), (10.00 m, 14.67 degC), (20.00 m, 14.83 degC), (30.00 m, 14.86 degC)
2018-09-07T21:15:15.817Z,1536354915.817 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:16:06.556Z,1536354966.556 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:17:06.955Z,1536355026.955 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:18:07.347Z,1536355087.347 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:19:07.355Z,1536355147.355 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:19:11.400Z,1536355151.400 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.64 from mean 13.66 degC, variance 0.46 degC^2, standard deviation 0.68 degC, and samples: (5.00 m, 14.44 degC), (10.00 m, 14.15 degC), (20.00 m, 13.33 degC), (30.00 m, 12.71 degC)
2018-09-07T21:19:11.400Z,1536355151.400 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:20:07.358Z,1536355207.358 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:21:07.747Z,1536355267.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:21:39.776Z,1536355299.776 [BPC1](ERROR): Bank A: No match for stick 2 serial number:1717 in the onboard configuration file.
2018-09-07T21:21:39.776Z,1536355299.776 [BPC1](ERROR): Failed to parse Bank A battery data
2018-09-07T21:22:08.148Z,1536355328.148 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:23:08.554Z,1536355388.554 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:24:08.555Z,1536355448.555 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:24:25.396Z,1536355465.396 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.18 from mean 14.27 degC, variance 0.04 degC^2, standard deviation 0.20 degC, and samples: (5.00 m, 14.45 degC), (10.00 m, 14.45 degC), (20.00 m, 14.18 degC), (30.00 m, 13.99 degC)
2018-09-07T21:24:25.396Z,1536355465.396 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:25:08.950Z,1536355508.950 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:26:09.347Z,1536355569.347 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:26:09.798Z,1536355569.798 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.14 from mean 14.74 degC, variance 0.03 degC^2, standard deviation 0.17 degC, and samples: (5.00 m, 14.48 degC), (10.00 m, 14.73 degC), (20.00 m, 14.92 degC), (30.00 m, 14.83 degC)
2018-09-07T21:26:09.799Z,1536355569.799 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:26:14.578Z,1536355574.578 [BPC1](ERROR): Bank A: No match for stick 4 serial number:1717 in the onboard configuration file.
2018-09-07T21:26:14.611Z,1536355574.611 [BPC1](ERROR): Failed to parse Bank A battery data
2018-09-07T21:27:09.751Z,1536355629.751 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:28:09.750Z,1536355689.750 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:29:10.159Z,1536355750.159 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:29:52.226Z,1536355792.226 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.67 from mean 13.64 degC, variance 0.51 degC^2, standard deviation 0.71 degC, and samples: (5.00 m, 14.38 degC), (10.00 m, 14.25 degC), (20.00 m, 13.29 degC), (30.00 m, 12.65 degC)
2018-09-07T21:29:52.228Z,1536355792.228 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:30:10.158Z,1536355810.158 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:31:10.550Z,1536355870.550 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:31:36.211Z,1536355896.211 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.16 from mean 14.80 degC, variance 0.03 degC^2, standard deviation 0.18 degC, and samples: (5.00 m, 14.52 degC), (10.00 m, 14.75 degC), (20.00 m, 14.94 degC), (30.00 m, 14.98 degC)
2018-09-07T21:31:36.212Z,1536355896.212 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:32:10.558Z,1536355930.558 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:33:10.558Z,1536355990.558 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:34:11.347Z,1536356051.347 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:35:10.955Z,1536356110.955 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:35:20.234Z,1536356120.234 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.56 from mean 13.97 degC, variance 0.40 degC^2, standard deviation 0.63 degC, and samples: (5.00 m, 14.60 degC), (10.00 m, 14.46 degC), (20.00 m, 13.80 degC), (30.00 m, 13.00 degC)
2018-09-07T21:35:20.235Z,1536356120.235 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:36:10.968Z,1536356170.968 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:36:58.605Z,1536356218.605 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.15 from mean 14.92 degC, variance 0.03 degC^2, standard deviation 0.16 degC, and samples: (5.00 m, 14.69 degC), (10.00 m, 14.86 degC), (20.00 m, 15.03 degC), (30.00 m, 15.10 degC)
2018-09-07T21:36:58.606Z,1536356218.606 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:37:11.368Z,1536356231.368 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:38:11.378Z,1536356291.378 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:39:11.767Z,1536356351.767 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:40:12.172Z,1536356412.172 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:40:41.794Z,1536356441.794 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.52 from mean 14.11 degC, variance 0.34 degC^2, standard deviation 0.59 degC, and samples: (5.00 m, 14.71 degC), (10.00 m, 14.54 degC), (20.00 m, 13.96 degC), (30.00 m, 13.21 degC)
2018-09-07T21:40:41.795Z,1536356441.795 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:41:12.574Z,1536356472.574 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:42:12.566Z,1536356532.566 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:42:25.408Z,1536356545.408 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.12 from mean 15.01 degC, variance 0.02 degC^2, standard deviation 0.15 degC, and samples: (5.00 m, 14.77 degC), (10.00 m, 15.00 degC), (20.00 m, 15.11 degC), (30.00 m, 15.15 degC)
2018-09-07T21:42:25.409Z,1536356545.409 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:43:12.568Z,1536356592.568 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:44:12.971Z,1536356652.971 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:45:13.367Z,1536356713.367 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:46:09.795Z,1536356769.795 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.63 from mean 13.93 degC, variance 0.43 degC^2, standard deviation 0.65 degC, and samples: (5.00 m, 14.63 degC), (10.00 m, 14.48 degC), (20.00 m, 13.54 degC), (30.00 m, 13.06 degC)
2018-09-07T21:46:09.795Z,1536356769.795 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:46:13.367Z,1536356773.367 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:47:13.367Z,1536356833.367 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:47:51.810Z,1536356871.810 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.11 from mean 14.91 degC, variance 0.02 degC^2, standard deviation 0.14 degC, and samples: (5.00 m, 14.69 degC), (10.00 m, 14.91 degC), (20.00 m, 15.07 degC), (30.00 m, 14.99 degC)
2018-09-07T21:47:51.810Z,1536356871.810 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:48:13.373Z,1536356893.373 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:49:13.777Z,1536356953.777 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:50:14.172Z,1536357014.172 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:51:01.033Z,1536357061.033 [sci2:NeedComms] Running Loop=1
2018-09-07T21:51:01.034Z,1536357061.034 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T21:51:01.034Z,1536357061.034 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T21:51:01.034Z,1536357061.034 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T21:51:01.034Z,1536357061.034 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T21:51:01.035Z,1536357061.035 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T21:51:01.035Z,1536357061.035 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T21:51:01.036Z,1536357061.036 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T21:51:01.037Z,1536357061.037 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T21:51:01.037Z,1536357061.037 [sci2:NeedComms:A] Running Loop=1
2018-09-07T21:51:01.040Z,1536357061.040 [sci2:NeedComms:A](INFO): last time_fix was: 1536353454.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T21:51:01.040Z,1536357061.040 [sci2:NeedComms:A] Stopped
2018-09-07T21:51:14.191Z,1536357074.191 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:51:34.232Z,1536357094.232 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.65 from mean 13.81 degC, variance 0.45 degC^2, standard deviation 0.67 degC, and samples: (5.00 m, 14.57 degC), (10.00 m, 14.34 degC), (20.00 m, 13.39 degC), (30.00 m, 12.94 degC)
2018-09-07T21:51:34.232Z,1536357094.232 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T21:51:44.283Z,1536357104.283 [sci2:NeedComms:C] Running Loop=1
2018-09-07T21:51:44.578Z,1536357104.578 [Radio_Surface](INFO): Powering up
2018-09-07T21:51:44.976Z,1536357104.976 [NAL9602](INFO): Powering up
2018-09-07T21:51:52.254Z,1536357112.254 [Radio_Surface](INFO): Powering down
2018-09-07T21:51:55.770Z,1536357115.770 [NAL9602](INFO): NAL9602 initialized
2018-09-07T21:51:58.314Z,1536357118.314 [Radio_Surface](INFO): Powering up
2018-09-07T21:52:14.566Z,1536357134.566 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:52:27.376Z,1536357147.376 [NAL9602](INFO): SBD MO Status=2, MOMSN=48550, MT Status=2, MTMSN=0
2018-09-07T21:52:27.376Z,1536357147.376 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T21:52:40.192Z,1536357160.192 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=48550, MT Status=1, MTMSN=1405
2018-09-07T21:52:40.192Z,1536357160.192 [NAL9602](INFO): Data available in MT queue
2018-09-07T21:52:40.865Z,1536357160.865 [NAL9602](INFO): Received command:configSet RDI_Pathfinder.loadAtStartup 0 bool persist;! echo 0 > /dev/loadB6
2018-09-07T21:52:41.108Z,1536357161.108 [CommandLine](IMPORTANT): got command configSet RDI_Pathfinder.loadAtStartup 0.000000 bool persist
2018-09-07T21:52:41.108Z,1536357161.108 [CommandLine](IMPORTANT): configSet RDI_Pathfinder.loadAtStartup requires a restart to take effect.
2018-09-07T21:52:41.113Z,1536357161.113 [CommandLine](IMPORTANT): got command ! echo 0 > /dev/loadB6
2018-09-07T21:53:14.946Z,1536357194.946 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:54:14.946Z,1536357254.946 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:55:15.346Z,1536357315.346 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:56:15.343Z,1536357375.343 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:56:56.955Z,1536357416.955 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-07T21:56:56.955Z,1536357416.955 [NAL9602] Data Fault, FailCount= 5
2018-09-07T21:56:56.955Z,1536357416.955 [NAL9602](ERROR): Data Fault
2018-09-07T21:56:57.044Z,1536357417.044 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-07T21:56:57.049Z,1536357417.049 [CBIT](CRITICAL): Data Fault in component: NAL9602
2018-09-07T21:56:57.362Z,1536357417.362 [NAL9602](INFO): Powering down
2018-09-07T21:56:57.440Z,1536357417.440 [CommandLine](FAULT): Scheduling is paused
2018-09-07T21:56:57.440Z,1536357417.440 [CBIT](INFO): Critical error at 20180907T215657
2018-09-07T21:56:57.445Z,1536357417.445 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-09-07T21:56:57.822Z,1536357417.822 [MissionManager](INFO): MissionManager is completed.
2018-09-07T21:56:57.822Z,1536357417.822 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-07T21:56:57.822Z,1536357417.822 [sci2] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:C] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:D] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:G] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:PeakDetectChl] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-07T21:56:57.823Z,1536357417.823 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:NeedComms] Stopped
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:NeedComms:C] Stopped
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:StandardEnvelopes] Stopped
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-07T21:56:57.824Z,1536357417.824 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:I.Pitch] Stopped
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:J.Buoyancy] Stopped
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:K.SetSpeed] Stopped
2018-09-07T21:56:57.829Z,1536357417.829 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:L.DepthEnvelope] Stopped
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:M.AltitudeEnvelope] Stopped
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:N.YoYo] Stopped
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:Lap] Stopped
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:Lap:Wpt1] Stopped
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-07T21:56:57.830Z,1536357417.830 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-07T21:56:57.831Z,1536357417.831 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T21:56:58.238Z,1536357418.238 [MissionManager](IMPORTANT): Started mission Default
2018-09-07T21:56:58.239Z,1536357418.239 [Default] Running Loop=1
2018-09-07T21:56:58.239Z,1536357418.239 [Default](DEBUG): Aggregate::initialize Default
2018-09-07T21:56:58.239Z,1536357418.239 [Default:B.GoToSurface] Running Loop=1
2018-09-07T21:56:58.239Z,1536357418.239 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T21:56:58.240Z,1536357418.240 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-07T21:56:58.240Z,1536357418.240 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-07T21:56:58.240Z,1536357418.240 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-07T21:56:58.249Z,1536357418.249 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T21:56:58.249Z,1536357418.249 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T21:56:58.250Z,1536357418.250 [Default:A.Wait] Running Loop=1
2018-09-07T21:56:58.250Z,1536357418.250 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-07T21:56:58.263Z,1536357418.263 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T21:56:58.263Z,1536357418.263 [CTD_Seabird](INFO): Powering down
2018-09-07T21:56:58.413Z,1536357418.413 [WetLabsBB2FL](INFO): Powering down
2018-09-07T21:56:58.665Z,1536357418.665 [CTD_Seabird](FAULT): LCB fault:  Software Overcurrent.
2018-09-07T21:56:58.666Z,1536357418.666 [CTD_Seabird] Hardware Fault, FailCount= 1
2018-09-07T21:56:58.666Z,1536357418.666 [CTD_Seabird](ERROR): Hardware Fault
2018-09-07T21:56:59.017Z,1536357419.017 [CBIT](ERROR): Hardware Fault in component: CTD_Seabird
2018-09-07T21:56:59.489Z,1536357419.489 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-09-07T21:56:59.489Z,1536357419.489 [CTD_Seabird] No Fault, FailCount= 1
2018-09-07T21:56:59.877Z,1536357419.877 [CTD_Seabird](INFO): Initializing
2018-09-07T21:56:59.878Z,1536357419.878 [CTD_Seabird](INFO): Checking LCM
2018-09-07T21:56:59.878Z,1536357419.878 [CTD_Seabird](INFO): LCM OK
2018-09-07T21:56:59.878Z,1536357419.878 [CTD_Seabird](INFO): Powering up
2018-09-07T21:57:05.211Z,1536357425.211 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T21:57:05.272Z,1536357425.272 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-09-07T21:57:05.273Z,1536357425.273 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-09-07T21:57:05.555Z,1536357425.555 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T21:57:05.555Z,1536357425.555 [CTD_Seabird](INFO): Powering down
2018-09-07T21:57:11.398Z,1536357431.398 [Default:A.Wait](INFO): Done Waiting.
2018-09-07T21:57:11.399Z,1536357431.399 [Default:A.Wait] Stopped
2018-09-07T21:57:11.399Z,1536357431.399 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-07T21:57:11.793Z,1536357431.793 [Default:CheckIn] Running Loop=1
2018-09-07T21:57:11.793Z,1536357431.793 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-07T21:57:11.794Z,1536357431.794 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-07T21:57:15.343Z,1536357435.343 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:58:15.739Z,1536357495.739 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T21:58:56.998Z,1536357536.998 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-07T21:58:56.998Z,1536357536.998 [NAL9602] No Fault, FailCount= 5
2018-09-07T21:58:57.342Z,1536357537.342 [NAL9602](INFO): Powering up NAL9602
2018-09-07T21:59:08.142Z,1536357548.142 [NAL9602](INFO): NAL9602 initialized
2018-09-07T21:59:16.143Z,1536357556.143 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:00:16.139Z,1536357616.139 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:01:16.140Z,1536357676.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:02:08.950Z,1536357728.950 [NAL9602](INFO): GPS fix at 20180907T220203: (36.983244, -122.482637)
2018-09-07T22:02:09.004Z,1536357729.004 [UniversalFixResidualReporter](INFO): Fix residual: 11.7 %DT, over the last 3435.8 m. Residual distance 401.7 m at bearing -71.6 degrees. Fix at (36.9832, -122.4826) with 2810.8 m made good.
2018-09-07T22:02:09.005Z,1536357729.005 [Default:CheckIn:Read_GPS] Stopped
2018-09-07T22:02:09.006Z,1536357729.006 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-07T22:02:16.551Z,1536357736.551 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:02:25.451Z,1536357745.451 [NAL9602](INFO): SBD MO Status=1, MOMSN=48551, MT Status=0, MTMSN=0
2018-09-07T22:02:25.504Z,1536357745.504 [NAL9602](INFO): Sent 264 bytes from file Logs/20180907T190331/Courier0019.lzma
2018-09-07T22:02:25.505Z,1536357745.505 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:02:25.506Z,1536357745.506 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0019.lzma.parts/0000.sbd
2018-09-07T22:02:25.507Z,1536357745.507 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0019.lzma
2018-09-07T22:02:33.955Z,1536357753.955 [NAL9602](INFO): SBD MO Status=1, MOMSN=48552, MT Status=0, MTMSN=0
2018-09-07T22:02:34.006Z,1536357754.006 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:02:34.006Z,1536357754.006 [NAL9602](INFO): Packets left to send: 9
2018-09-07T22:02:34.008Z,1536357754.008 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0009.sbd
2018-09-07T22:02:46.472Z,1536357766.472 [NAL9602](INFO): SBD MO Status=1, MOMSN=48553, MT Status=0, MTMSN=0
2018-09-07T22:02:46.521Z,1536357766.521 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:02:46.521Z,1536357766.521 [NAL9602](INFO): Packets left to send: 8
2018-09-07T22:02:46.523Z,1536357766.523 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0008.sbd
2018-09-07T22:02:59.775Z,1536357779.775 [NAL9602](INFO): SBD MO Status=1, MOMSN=48554, MT Status=0, MTMSN=0
2018-09-07T22:02:59.827Z,1536357779.827 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:02:59.828Z,1536357779.828 [NAL9602](INFO): Packets left to send: 7
2018-09-07T22:02:59.839Z,1536357779.839 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0007.sbd
2018-09-07T22:03:09.896Z,1536357789.896 [NAL9602](INFO): SBD MO Status=1, MOMSN=48555, MT Status=0, MTMSN=0
2018-09-07T22:03:09.945Z,1536357789.945 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:03:09.945Z,1536357789.945 [NAL9602](INFO): Packets left to send: 6
2018-09-07T22:03:09.947Z,1536357789.947 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0006.sbd
2018-09-07T22:03:17.195Z,1536357797.195 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:03:20.408Z,1536357800.408 [NAL9602](INFO): SBD MO Status=1, MOMSN=48556, MT Status=0, MTMSN=0
2018-09-07T22:03:20.457Z,1536357800.457 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:03:20.458Z,1536357800.458 [NAL9602](INFO): Packets left to send: 5
2018-09-07T22:03:20.459Z,1536357800.459 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0005.sbd
2018-09-07T22:03:32.922Z,1536357812.922 [NAL9602](INFO): SBD MO Status=1, MOMSN=48557, MT Status=0, MTMSN=0
2018-09-07T22:03:32.977Z,1536357812.977 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:03:32.977Z,1536357812.977 [NAL9602](INFO): Packets left to send: 4
2018-09-07T22:03:32.978Z,1536357812.978 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0004.sbd
2018-09-07T22:03:47.424Z,1536357827.424 [NAL9602](INFO): SBD MO Status=1, MOMSN=48558, MT Status=0, MTMSN=0
2018-09-07T22:03:47.481Z,1536357827.481 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:03:47.481Z,1536357827.481 [NAL9602](INFO): Packets left to send: 3
2018-09-07T22:03:47.483Z,1536357827.483 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0003.sbd
2018-09-07T22:03:59.564Z,1536357839.564 [NAL9602](INFO): SBD MO Status=1, MOMSN=48559, MT Status=0, MTMSN=0
2018-09-07T22:03:59.613Z,1536357839.613 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:03:59.613Z,1536357839.613 [NAL9602](INFO): Packets left to send: 2
2018-09-07T22:03:59.615Z,1536357839.615 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0002.sbd
2018-09-07T22:04:12.452Z,1536357852.452 [NAL9602](INFO): SBD MO Status=1, MOMSN=48560, MT Status=0, MTMSN=0
2018-09-07T22:04:12.501Z,1536357852.501 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:04:12.501Z,1536357852.501 [NAL9602](INFO): Packets left to send: 1
2018-09-07T22:04:12.503Z,1536357852.503 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0001.sbd
2018-09-07T22:04:17.351Z,1536357857.351 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:04:26.955Z,1536357866.955 [NAL9602](INFO): SBD MO Status=1, MOMSN=48561, MT Status=0, MTMSN=0
2018-09-07T22:04:27.018Z,1536357867.018 [NAL9602](INFO): Sent 255 bytes from file Logs/20180907T190331/Express0020.lzma
2018-09-07T22:04:27.018Z,1536357867.018 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:04:27.019Z,1536357867.019 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0020.lzma.parts/0000.sbd
2018-09-07T22:04:27.020Z,1536357867.020 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0020.lzma
2018-09-07T22:04:36.155Z,1536357876.155 [NAL9602](INFO): SBD MO Status=0, MOMSN=48562, MT Status=0, MTMSN=0
2018-09-07T22:04:36.209Z,1536357876.209 [NAL9602](INFO): Failure count cleared after critical for NAL9602
2018-09-07T22:04:36.266Z,1536357876.266 [Default:CheckIn:Read_Iridium] Stopped
2018-09-07T22:04:36.267Z,1536357876.267 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-07T22:04:36.267Z,1536357876.267 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-07T22:05:06.560Z,1536357906.560 [NAL9602](INFO): Powering down
2018-09-07T22:05:17.757Z,1536357917.757 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:06:18.147Z,1536357978.147 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:07:18.147Z,1536358038.147 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:08:18.151Z,1536358098.151 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:09:18.947Z,1536358158.947 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:09:36.988Z,1536358176.988 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-07T22:09:36.988Z,1536358176.988 [Default:CheckIn:C.Wait] Stopped
2018-09-07T22:09:36.988Z,1536358176.988 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-07T22:09:36.989Z,1536358176.989 [Default:CheckIn:D] Running Loop=1
2018-09-07T22:09:37.392Z,1536358177.392 [Default:CheckIn:D] Stopped
2018-09-07T22:09:37.392Z,1536358177.392 [Default:CheckIn:E] Running Loop=1
2018-09-07T22:09:37.789Z,1536358177.789 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 12.652519 min 
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn:E] Stopped
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn] Stopped
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn](INFO): Running loop #2
2018-09-07T22:09:37.792Z,1536358177.792 [Default:CheckIn] Running Loop=2
2018-09-07T22:09:37.793Z,1536358177.793 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-07T22:09:37.793Z,1536358177.793 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-07T22:09:38.549Z,1536358178.549 [NAL9602](INFO): Powering up
2018-09-07T22:09:49.350Z,1536358189.350 [NAL9602](INFO): NAL9602 initialized
2018-09-07T22:10:08.158Z,1536358208.158 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=48563, MT Status=1, MTMSN=1406
2018-09-07T22:10:08.159Z,1536358208.159 [NAL9602](INFO): Data available in MT queue
2018-09-07T22:10:08.806Z,1536358208.806 [NAL9602](INFO): Received command:configSet Express linearApproximation latitude 0.005 angular_degree persist;configSet Express linearApproximation longitude 0.005 angular_degree persist
2018-09-07T22:10:09.508Z,1536358209.508 [CommandLine](IMPORTANT): got command configSet Express linearApproximation latitude 0.005000 angular_degree persist
2018-09-07T22:10:09.511Z,1536358209.511 [CommandLine](IMPORTANT): got command configSet Express linearApproximation longitude 0.005000 angular_degree persist
2018-09-07T22:10:19.199Z,1536358219.199 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:11:19.598Z,1536358279.598 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:12:19.206Z,1536358339.206 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:12:37.211Z,1536358357.211 [NAL9602](INFO): GPS fix at 20180907T221230: (36.981873, -122.482437)
2018-09-07T22:12:37.264Z,1536358357.264 [Default:CheckIn:Read_GPS] Stopped
2018-09-07T22:12:37.265Z,1536358357.265 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-07T22:13:00.944Z,1536358380.944 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=48564, MT Status=1, MTMSN=1407
2018-09-07T22:13:00.993Z,1536358380.993 [NAL9602](INFO): Sent 62 bytes from file Logs/20180907T190331/Courier0022.lzma
2018-09-07T22:13:00.994Z,1536358380.994 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:13:00.995Z,1536358380.995 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0022.lzma.parts/0000.sbd
2018-09-07T22:13:00.995Z,1536358380.995 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0022.lzma
2018-09-07T22:13:01.593Z,1536358381.593 [NAL9602](INFO): Received command:configSet Express linearApproximation depth 5 meter persist;configSet Express none ESPComponent.sampling persist;configSet Express none ESPComponent.sample_number persist
2018-09-07T22:13:03.458Z,1536358383.458 [CommandLine](IMPORTANT): got command configSet Express linearApproximation depth 5.000000 meter persist
2018-09-07T22:13:03.462Z,1536358383.462 [CommandLine](IMPORTANT): got command configSet Express none ESPComponent.sampling persist
2018-09-07T22:13:03.465Z,1536358383.465 [CommandLine](IMPORTANT): got command configSet Express none ESPComponent.sample_number persist
2018-09-07T22:13:14.468Z,1536358394.468 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=48565, MT Status=1, MTMSN=1408
2018-09-07T22:13:14.521Z,1536358394.521 [NAL9602](INFO): Sent 300 bytes from file Logs/20180907T190331/Express0023.lzma
2018-09-07T22:13:14.521Z,1536358394.521 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:13:14.523Z,1536358394.523 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0023.lzma.parts/0000.sbd
2018-09-07T22:13:14.523Z,1536358394.523 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0023.lzma
2018-09-07T22:13:15.013Z,1536358395.013 [NAL9602](INFO): Received command:configSet Express None CTD_Seabird.bin_median_sea_water_salinity persist
2018-09-07T22:13:16.360Z,1536358396.360 [CommandLine](IMPORTANT): got command configSet Express none CTD_Seabird.bin_median_sea_water_salinity persist
2018-09-07T22:13:19.667Z,1536358399.667 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:13:25.281Z,1536358405.281 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=48566, MT Status=1, MTMSN=1409
2018-09-07T22:13:25.970Z,1536358405.970 [NAL9602](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 4 hour;set sci2.Lat1 36.983 degree;set sci2.Lon1 -122.52 degree;set sci2.YoYoMinDepth 5 meter;set sci2.YoYoMaxDepth 50 meter;set sci2.MaxDepth 60 meter;run 
2018-09-07T22:13:25.984Z,1536358405.984 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-07T22:13:25.986Z,1536358405.986 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-07T22:13:26.104Z,1536358406.104 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-07T22:13:26.107Z,1536358406.107 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-07T22:13:26.109Z,1536358406.109 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-07T22:13:26.111Z,1536358406.111 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-07T22:13:26.113Z,1536358406.113 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-07T22:13:26.115Z,1536358406.115 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-07T22:13:26.143Z,1536358406.143 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-07T22:13:26.145Z,1536358406.145 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-07T22:13:26.147Z,1536358406.147 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-07T22:13:26.149Z,1536358406.149 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-07T22:13:26.151Z,1536358406.151 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-07T22:13:26.168Z,1536358406.168 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-07T22:13:26.171Z,1536358406.171 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-07T22:13:26.173Z,1536358406.173 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-07T22:13:26.175Z,1536358406.175 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-07T22:13:26.177Z,1536358406.177 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-07T22:13:26.179Z,1536358406.179 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-07T22:13:26.202Z,1536358406.202 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-07T22:13:26.204Z,1536358406.204 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-07T22:13:26.210Z,1536358406.210 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-07T22:13:26.221Z,1536358406.221 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-07T22:13:26.223Z,1536358406.223 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-07T22:13:26.230Z,1536358406.230 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-07T22:13:26.232Z,1536358406.232 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 325.000001 cc
2018-09-07T22:13:26.251Z,1536358406.251 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.200000 cm
2018-09-07T22:13:26.257Z,1536358406.257 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-07T22:13:26.259Z,1536358406.259 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-07T22:13:26.266Z,1536358406.266 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-07T22:13:26.266Z,1536358406.266 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-07T22:13:26.434Z,1536358406.434 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-07T22:13:26.436Z,1536358406.436 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-07T22:13:26.439Z,1536358406.439 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-07T22:13:26.440Z,1536358406.440 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-07T22:13:26.460Z,1536358406.460 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-07T22:13:26.462Z,1536358406.462 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-07T22:13:26.464Z,1536358406.464 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-07T22:13:26.466Z,1536358406.466 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-07T22:13:26.468Z,1536358406.468 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-07T22:13:26.470Z,1536358406.470 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-07T22:13:26.472Z,1536358406.472 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-07T22:13:26.474Z,1536358406.474 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-07T22:13:26.477Z,1536358406.477 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-07T22:13:26.479Z,1536358406.479 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 1.000000 bool
2018-09-07T22:13:26.481Z,1536358406.481 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-07T22:13:26.484Z,1536358406.484 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-07T22:13:26.486Z,1536358406.486 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 0.000000 bool
2018-09-07T22:13:26.488Z,1536358406.488 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-07T22:13:26.525Z,1536358406.525 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-07T22:13:26.527Z,1536358406.527 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-07T22:13:26.530Z,1536358406.530 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-07T22:13:26.532Z,1536358406.532 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-07T22:13:26.549Z,1536358406.549 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-07T22:13:26.551Z,1536358406.551 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-07T22:13:26.554Z,1536358406.554 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-07T22:13:26.556Z,1536358406.556 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-07T22:13:26.576Z,1536358406.576 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-07T22:13:26.579Z,1536358406.579 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-07T22:13:26.581Z,1536358406.581 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-07T22:13:26.583Z,1536358406.583 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-07T22:13:26.602Z,1536358406.602 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-07T22:13:26.604Z,1536358406.604 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-07T22:13:26.607Z,1536358406.607 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-07T22:13:26.622Z,1536358406.622 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-07T22:13:26.624Z,1536358406.624 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-07T22:13:26.626Z,1536358406.626 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-07T22:13:26.628Z,1536358406.628 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-07T22:13:26.631Z,1536358406.631 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-07T22:13:26.652Z,1536358406.652 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-07T22:13:26.685Z,1536358406.685 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T22:13:26.714Z,1536358406.714 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-07T22:13:26.743Z,1536358406.743 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T22:13:26.751Z,1536358406.751 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-07T22:13:26.762Z,1536358406.762 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-07T22:13:26.764Z,1536358406.764 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-07T22:13:26.764Z,1536358406.764 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-07T22:13:26.812Z,1536358406.812 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-07T22:13:26.815Z,1536358406.815 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-07T22:13:26.817Z,1536358406.817 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-07T22:13:26.819Z,1536358406.819 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-07T22:13:26.821Z,1536358406.821 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-07T22:13:26.823Z,1536358406.823 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-07T22:13:26.825Z,1536358406.825 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-07T22:13:26.832Z,1536358406.832 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-07T22:13:26.843Z,1536358406.843 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-07T22:13:26.893Z,1536358406.893 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-07T22:13:26.896Z,1536358406.896 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-07T22:13:26.910Z,1536358406.910 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-07T22:13:26.911Z,1536358406.911 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-07T22:13:26.915Z,1536358406.915 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-07T22:13:26.921Z,1536358406.921 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-07T22:13:26.930Z,1536358406.930 [sci2:I.Pitch](DEBUG): Construct.
2018-09-07T22:13:26.933Z,1536358406.933 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-07T22:13:26.935Z,1536358406.935 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-07T22:13:26.938Z,1536358406.938 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-07T22:13:26.945Z,1536358406.945 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-07T22:13:26.950Z,1536358406.950 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-07T22:13:26.976Z,1536358406.976 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:26.981Z,1536358406.981 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:26.986Z,1536358406.986 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:26.994Z,1536358406.994 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:26.999Z,1536358406.999 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:27.004Z,1536358407.004 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:27.020Z,1536358407.020 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-07T22:13:27.049Z,1536358407.049 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-07T22:13:27.050Z,1536358407.050 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-07T22:13:33.245Z,1536358413.245 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 4.000000 hour
2018-09-07T22:13:33.246Z,1536358413.246 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.983002 degree
2018-09-07T22:13:33.246Z,1536358413.246 [CommandLine](IMPORTANT): got command set sci2.Lon1 -122.519997 degree
2018-09-07T22:13:33.247Z,1536358413.247 [CommandLine](IMPORTANT): got command set sci2.YoYoMinDepth 5.000000 meter
2018-09-07T22:13:33.248Z,1536358413.248 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 50.000000 meter
2018-09-07T22:13:33.249Z,1536358413.249 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 60.000000 meter
2018-09-07T22:13:33.249Z,1536358413.249 [CommandLine](IMPORTANT): got command run 
2018-09-07T22:13:33.251Z,1536358413.251 [CommandLine](IMPORTANT): Running 
2018-09-07T22:13:33.340Z,1536358413.340 [Default] Stopped
2018-09-07T22:13:33.341Z,1536358413.341 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-07T22:13:33.341Z,1536358413.341 [Default:B.GoToSurface] Stopped
2018-09-07T22:13:33.341Z,1536358413.341 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T22:13:33.341Z,1536358413.341 [Default:CheckIn] Stopped
2018-09-07T22:13:33.341Z,1536358413.341 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-07T22:13:33.341Z,1536358413.341 [Default:CheckIn:Read_Iridium] Stopped
2018-09-07T22:13:33.341Z,1536358413.341 [MissionManager](IMPORTANT): Started mission sci2
2018-09-07T22:13:33.342Z,1536358413.342 [sci2] Running Loop=1
2018-09-07T22:13:33.342Z,1536358413.342 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science] Running Loop=1
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science:A] Running Loop=1
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science:B] Running Loop=1
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science:C] Running Loop=1
2018-09-07T22:13:33.342Z,1536358413.342 [sci2:Science:D] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:E] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:F] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:G] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:Read_Oil] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T22:13:33.343Z,1536358413.343 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T22:13:33.344Z,1536358413.344 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-07T22:13:33.344Z,1536358413.344 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-07T22:13:33.345Z,1536358413.345 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-07T22:13:33.345Z,1536358413.345 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-07T22:13:33.345Z,1536358413.345 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-07T22:13:33.345Z,1536358413.345 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-07T22:13:33.346Z,1536358413.346 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T22:13:33.346Z,1536358413.346 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T22:13:33.347Z,1536358413.347 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-07T22:13:33.347Z,1536358413.347 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-07T22:13:33.347Z,1536358413.347 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-07T22:13:33.347Z,1536358413.347 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes] Running Loop=1
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-07T22:13:33.348Z,1536358413.348 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-07T22:13:33.349Z,1536358413.349 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-07T22:13:33.349Z,1536358413.349 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-07T22:13:33.349Z,1536358413.349 [sci2:I.Pitch] Running Loop=1
2018-09-07T22:13:33.349Z,1536358413.349 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-07T22:13:33.349Z,1536358413.349 [sci2:J.Buoyancy] Running Loop=1
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:K.SetSpeed] Running Loop=1
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-07T22:13:33.350Z,1536358413.350 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-07T22:13:33.351Z,1536358413.351 [sci2:N.YoYo] Running Loop=1
2018-09-07T22:13:33.351Z,1536358413.351 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-07T22:13:33.351Z,1536358413.351 [sci2:C] Running Loop=1
2018-09-07T22:13:33.351Z,1536358413.351 [sci2:N.YoYo] Running Loop=1
2018-09-07T22:13:33.353Z,1536358413.353 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-07T22:13:33.354Z,1536358413.354 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-07T22:13:33.356Z,1536358413.356 [sci2:K.SetSpeed] Running Loop=1
2018-09-07T22:13:33.356Z,1536358413.356 [sci2:J.Buoyancy] Running Loop=1
2018-09-07T22:13:33.358Z,1536358413.358 [sci2:I.Pitch] Running Loop=1
2018-09-07T22:13:33.359Z,1536358413.359 [sci2:StandardEnvelopes] Running Loop=1
2018-09-07T22:13:33.359Z,1536358413.359 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-07T22:13:33.360Z,1536358413.360 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-07T22:13:33.361Z,1536358413.361 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-07T22:13:33.363Z,1536358413.363 [sci2:C] Stopped
2018-09-07T22:13:33.363Z,1536358413.363 [sci2:E] Running Loop=1
2018-09-07T22:13:33.363Z,1536358413.363 [sci2:Science] Running Loop=1
2018-09-07T22:13:33.366Z,1536358413.366 [sci2:Science:PeakDetectOil] Stopped
2018-09-07T22:13:33.366Z,1536358413.366 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-07T22:13:33.366Z,1536358413.366 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-07T22:13:33.366Z,1536358413.366 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:PeakDetectNO3] Stopped
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-07T22:13:33.367Z,1536358413.367 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-07T22:13:33.368Z,1536358413.368 [sci2:Science:Read_Oil] Stopped
2018-09-07T22:13:33.368Z,1536358413.368 [sci2:Science:G] Running Loop=1
2018-09-07T22:13:33.393Z,1536358413.393 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-07T22:13:33.394Z,1536358413.394 [sci2:Science:F] Stopped
2018-09-07T22:13:33.394Z,1536358413.394 [sci2:Science:E] Stopped
2018-09-07T22:13:33.394Z,1536358413.394 [sci2:Science:D] Running Loop=1
2018-09-07T22:13:33.394Z,1536358413.394 [sci2:Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_temperature
2018-09-07T22:13:33.395Z,1536358413.395 [sci2:Science:D](DEBUG): Initialize ReadDataComponent to sense CTD_Seabird.sea_water_salinity
2018-09-07T22:13:33.396Z,1536358413.396 [sci2:Science:C] Running Loop=1
2018-09-07T22:13:33.396Z,1536358413.396 [sci2:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-07T22:13:33.397Z,1536358413.397 [sci2:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-07T22:13:33.398Z,1536358413.398 [sci2:Science:B] Stopped
2018-09-07T22:13:33.398Z,1536358413.398 [sci2:Science:A] Stopped
2018-09-07T22:13:33.402Z,1536358413.402 [CTD_Seabird](INFO): Initializing
2018-09-07T22:13:33.402Z,1536358413.402 [CTD_Seabird](INFO): Checking LCM
2018-09-07T22:13:33.402Z,1536358413.402 [CTD_Seabird](INFO): LCM OK
2018-09-07T22:13:33.402Z,1536358413.402 [CTD_Seabird](INFO): Powering up
2018-09-07T22:13:33.562Z,1536358413.562 [sci2:E] Stopped
2018-09-07T22:13:33.562Z,1536358413.562 [sci2:F] Running Loop=1
2018-09-07T22:13:33.677Z,1536358413.677 [WetLabsBB2FL](INFO): Opening uart, block timeout 10ths=2
2018-09-07T22:13:33.677Z,1536358413.677 [WetLabsBB2FL](INFO): Powering up
2018-09-07T22:13:33.935Z,1536358413.935 [sci2:F] Stopped
2018-09-07T22:13:33.935Z,1536358413.935 [sci2:G] Running Loop=1
2018-09-07T22:13:34.261Z,1536358414.261 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-09-07T22:13:34.261Z,1536358414.261 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-07T22:13:34.261Z,1536358414.261 [ThrusterServo](ERROR): Communications Fault
2018-09-07T22:13:34.265Z,1536358414.265 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-07T22:13:34.370Z,1536358414.370 [sci2:G] Stopped
2018-09-07T22:13:34.370Z,1536358414.370 [sci2:StartingMission] Running Loop=1
2018-09-07T22:13:34.370Z,1536358414.370 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-07T22:13:34.440Z,1536358414.440 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-07T22:13:34.440Z,1536358414.440 [ThrusterServo](INFO): Powering down
2018-09-07T22:13:34.744Z,1536358414.744 [sci2:NeedComms] Running Loop=1
2018-09-07T22:13:34.745Z,1536358414.745 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T22:13:34.745Z,1536358414.745 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T22:13:34.745Z,1536358414.745 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T22:13:34.745Z,1536358414.745 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T22:13:34.746Z,1536358414.746 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T22:13:34.746Z,1536358414.746 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T22:13:34.747Z,1536358414.747 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T22:13:34.747Z,1536358414.747 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T22:13:34.747Z,1536358414.747 [sci2:NeedComms:A] Running Loop=1
2018-09-07T22:13:34.757Z,1536358414.757 [sci2:NeedComms:A](INFO): last time_fix was: 1536358350.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T22:13:34.758Z,1536358414.758 [sci2:NeedComms:A] Stopped
2018-09-07T22:13:35.154Z,1536358415.154 [sci2:NeedComms:C] Running Loop=1
2018-09-07T22:13:35.481Z,1536358415.481 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-07T22:13:35.481Z,1536358415.481 [ThrusterServo] No Fault, FailCount= 1
2018-09-07T22:13:35.590Z,1536358415.590 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-07T22:13:35.724Z,1536358415.724 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-07T22:13:35.724Z,1536358415.724 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-07T22:13:37.119Z,1536358417.119 [NAL9602](INFO): GPS fix at 20180907T221330: (36.981765, -122.482447)
2018-09-07T22:13:37.176Z,1536358417.176 [sci2:NeedComms:C] Stopped
2018-09-07T22:13:37.176Z,1536358417.176 [sci2:NeedComms:D] Running Loop=1
2018-09-07T22:13:37.567Z,1536358417.567 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-07T22:13:38.895Z,1536358418.895 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T22:13:38.990Z,1536358418.990 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-09-07T22:13:38.991Z,1536358418.991 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-09-07T22:14:00.036Z,1536358440.036 [NAL9602](INFO): SBD MO Status=1, MOMSN=48567, MT Status=0, MTMSN=0
2018-09-07T22:14:00.089Z,1536358440.089 [NAL9602](INFO): Sent 62 bytes from file Logs/20180907T190331/Courier0025.lzma
2018-09-07T22:14:00.089Z,1536358440.089 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:14:00.091Z,1536358440.091 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0025.lzma.parts/0000.sbd
2018-09-07T22:14:00.091Z,1536358440.091 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0025.lzma
2018-09-07T22:14:12.951Z,1536358452.951 [NAL9602](INFO): SBD MO Status=1, MOMSN=48568, MT Status=0, MTMSN=0
2018-09-07T22:14:13.005Z,1536358453.005 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0026.lzma
2018-09-07T22:14:13.005Z,1536358453.005 [NAL9602](INFO): Packets left to send: 1
2018-09-07T22:14:13.007Z,1536358453.007 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0026.lzma.parts/0001.sbd
2018-09-07T22:14:19.867Z,1536358459.867 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:14:26.279Z,1536358466.279 [NAL9602](INFO): SBD MO Status=1, MOMSN=48569, MT Status=0, MTMSN=0
2018-09-07T22:14:26.333Z,1536358466.333 [NAL9602](INFO): Sent 146 bytes from file Logs/20180907T190331/Express0026.lzma
2018-09-07T22:14:26.333Z,1536358466.333 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:14:26.335Z,1536358466.335 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0026.lzma.parts/0000.sbd
2018-09-07T22:14:26.336Z,1536358466.336 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0026.lzma
2018-09-07T22:14:35.882Z,1536358475.882 [NAL9602](INFO): SBD MO Status=0, MOMSN=48570, MT Status=0, MTMSN=0
2018-09-07T22:15:08.456Z,1536358508.456 [NAL9602](INFO): SBD MO Status=2, MOMSN=48571, MT Status=2, MTMSN=0
2018-09-07T22:15:08.456Z,1536358508.456 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:15:19.746Z,1536358519.746 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:15:20.556Z,1536358520.556 [NAL9602](INFO): SBD MO Status=1, MOMSN=48571, MT Status=0, MTMSN=0
2018-09-07T22:15:20.609Z,1536358520.609 [NAL9602](INFO): Sent 25 bytes from file Logs/20180907T190331/Courier0028.lzma
2018-09-07T22:15:20.609Z,1536358520.609 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:15:20.611Z,1536358520.611 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0028.lzma.parts/0000.sbd
2018-09-07T22:15:20.611Z,1536358520.611 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0028.lzma
2018-09-07T22:15:38.250Z,1536358538.250 [NAL9602](INFO): SBD MO Status=2, MOMSN=48572, MT Status=2, MTMSN=0
2018-09-07T22:15:38.250Z,1536358538.250 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:16:01.181Z,1536358561.181 [NAL9602](INFO): SBD MO Status=2, MOMSN=48572, MT Status=2, MTMSN=0
2018-09-07T22:16:01.182Z,1536358561.182 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:16:20.135Z,1536358580.135 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:16:31.712Z,1536358591.712 [NAL9602](INFO): SBD MO Status=2, MOMSN=48572, MT Status=2, MTMSN=0
2018-09-07T22:16:31.712Z,1536358591.712 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:17:05.040Z,1536358625.040 [NAL9602](INFO): SBD MO Status=2, MOMSN=48572, MT Status=2, MTMSN=0
2018-09-07T22:17:05.040Z,1536358625.040 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:17:20.338Z,1536358640.338 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:17:26.744Z,1536358646.744 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=48572, MT Status=1, MTMSN=1410
2018-09-07T22:17:26.797Z,1536358646.797 [NAL9602](INFO): Sent 115 bytes from file Logs/20180907T190331/Express0029.lzma
2018-09-07T22:17:26.797Z,1536358646.797 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:17:26.799Z,1536358646.799 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0029.lzma.parts/0000.sbd
2018-09-07T22:17:26.799Z,1536358646.799 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0029.lzma
2018-09-07T22:17:27.269Z,1536358647.269 [NAL9602](INFO): Received command:configSet Radio_Surface.loadAtStartup 0 bool persist
2018-09-07T22:17:27.495Z,1536358647.495 [CommandLine](IMPORTANT): got command configSet Radio_Surface.loadAtStartup 0.000000 bool persist
2018-09-07T22:17:27.495Z,1536358647.495 [CommandLine](IMPORTANT): configSet Radio_Surface.loadAtStartup requires a restart to take effect.
2018-09-07T22:17:40.021Z,1536358660.021 [NAL9602](INFO): SBD MO Status=2, MOMSN=48573, MT Status=2, MTMSN=0
2018-09-07T22:17:40.022Z,1536358660.022 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:17:56.832Z,1536358676.832 [NAL9602](INFO): SBD MO Status=2, MOMSN=48573, MT Status=2, MTMSN=0
2018-09-07T22:17:56.833Z,1536358676.833 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T22:18:01.711Z,1536358681.711 [NAL9602](ERROR): Inadequate Iridium signal strength reported: 0
2018-09-07T22:18:15.221Z,1536358695.221 [NAL9602](INFO): SBD MO Status=0, MOMSN=48573, MT Status=0, MTMSN=0
2018-09-07T22:18:20.417Z,1536358700.417 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:18:43.347Z,1536358723.347 [NAL9602](INFO): SBD MO Status=1, MOMSN=48574, MT Status=0, MTMSN=0
2018-09-07T22:18:43.393Z,1536358723.393 [NAL9602](INFO): Sent 25 bytes from file Logs/20180907T190331/Courier0031.lzma
2018-09-07T22:18:43.394Z,1536358723.394 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:18:43.395Z,1536358723.395 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0031.lzma.parts/0000.sbd
2018-09-07T22:18:43.395Z,1536358723.395 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0031.lzma
2018-09-07T22:19:05.062Z,1536358745.062 [NAL9602](INFO): SBD MO Status=1, MOMSN=48575, MT Status=0, MTMSN=0
2018-09-07T22:19:05.117Z,1536358745.117 [NAL9602](INFO): Sent 318 bytes from file Logs/20180907T190331/Express0032.lzma
2018-09-07T22:19:05.117Z,1536358745.117 [NAL9602](INFO): Packets left to send: 0
2018-09-07T22:19:05.119Z,1536358745.119 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0032.lzma.parts/0000.sbd
2018-09-07T22:19:05.119Z,1536358745.119 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Express0032.lzma
2018-09-07T22:19:19.879Z,1536358759.879 [NAL9602](INFO): SBD MO Status=0, MOMSN=48576, MT Status=0, MTMSN=0
2018-09-07T22:19:19.998Z,1536358759.998 [sci2:NeedComms:D] Stopped
2018-09-07T22:19:19.999Z,1536358759.999 [sci2:NeedComms:E] Running Loop=1
2018-09-07T22:19:20.313Z,1536358760.313 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-07T22:19:20.669Z,1536358760.669 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:19:22.281Z,1536358762.281 [NAL9602](INFO): GPS fix at 20180907T221916: (36.981217, -122.482389)
2018-09-07T22:19:22.353Z,1536358762.353 [sci2:NeedComms:E] Stopped
2018-09-07T22:19:22.354Z,1536358762.354 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-07T22:19:22.355Z,1536358762.355 [sci2:NeedComms] Stopped
2018-09-07T22:19:22.355Z,1536358762.355 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T22:19:22.355Z,1536358762.355 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T22:19:22.355Z,1536358762.355 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T22:19:22.740Z,1536358762.740 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-07T22:19:22.740Z,1536358762.740 [sci2:StartingMission] Stopped
2018-09-07T22:19:22.740Z,1536358762.740 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-07T22:19:22.741Z,1536358762.741 [sci2:Lap] Running Loop=1
2018-09-07T22:19:22.745Z,1536358762.745 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-07T22:19:22.749Z,1536358762.749 [sci2:Lap:Wpt1] Running Loop=1
2018-09-07T22:19:22.749Z,1536358762.749 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-07T22:19:22.749Z,1536358762.749 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-07T22:19:22.749Z,1536358762.749 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T22:19:41.262Z,1536358781.262 [Radio_Surface](INFO): Powering down
2018-09-07T22:19:41.666Z,1536358781.666 [Radio_Surface](FAULT): LCB fault: LCB Watchdog Reset. Invalid Command. Hardware Overcurrent Shutdown. Software Overcurrent. Current Limiter Activated.
2018-09-07T22:19:41.666Z,1536358781.666 [Radio_Surface] Hardware Fault, FailCount= 1
2018-09-07T22:19:41.666Z,1536358781.666 [Radio_Surface](ERROR): Hardware Fault
2018-09-07T22:19:42.054Z,1536358782.054 [CBIT](ERROR): Hardware Fault in component: Radio_Surface
2018-09-07T22:19:42.876Z,1536358782.876 [CBIT](INFO): Clearing failed state for component Radio_Surface
2018-09-07T22:19:42.876Z,1536358782.876 [Radio_Surface] No Fault, FailCount= 1
2018-09-07T22:19:42.877Z,1536358782.877 [Radio_Surface](INFO): Powering up
2018-09-07T22:19:48.534Z,1536358788.534 [Radio_Surface](INFO): Powering down
2018-09-07T22:19:54.660Z,1536358794.660 [NAL9602](INFO): Powering down
2018-09-07T22:20:20.659Z,1536358820.659 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:21:20.669Z,1536358880.669 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:21:49.504Z,1536358909.504 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.03 from mean 15.65 degC, variance 0.00 degC^2, standard deviation 0.04 degC, and samples: (5.00 m, 15.68 degC), (10.00 m, 15.67 degC), (20.00 m, 15.67 degC), (30.00 m, 15.59 degC)
2018-09-07T22:21:49.521Z,1536358909.521 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:22:21.059Z,1536358941.059 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:23:21.459Z,1536359001.459 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:24:21.455Z,1536359061.455 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:25:21.460Z,1536359121.460 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:25:32.703Z,1536359132.703 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.25 from mean 14.19 degC, variance 0.09 degC^2, standard deviation 0.30 degC, and samples: (5.00 m, 14.51 degC), (10.00 m, 14.37 degC), (20.00 m, 14.16 degC), (30.00 m, 13.71 degC)
2018-09-07T22:25:32.704Z,1536359132.704 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:26:21.851Z,1536359181.851 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:27:20.298Z,1536359240.298 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.26 from mean 15.01 degC, variance 0.07 degC^2, standard deviation 0.27 degC, and samples: (5.00 m, 14.66 degC), (10.00 m, 14.84 degC), (20.00 m, 15.21 degC), (30.00 m, 15.31 degC)
2018-09-07T22:27:20.299Z,1536359240.299 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:27:21.855Z,1536359241.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:28:21.855Z,1536359301.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:29:22.263Z,1536359362.263 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:29:50.304Z,1536359390.304 [BPC1](ERROR): Bank A: No match for stick 6 serial number:1717 in the onboard configuration file.
2018-09-07T22:29:50.305Z,1536359390.305 [BPC1](ERROR): Failed to parse Bank A battery data
2018-09-07T22:30:22.255Z,1536359422.255 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:31:01.511Z,1536359461.511 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.46 from mean 14.06 degC, variance 0.26 degC^2, standard deviation 0.51 degC, and samples: (5.00 m, 14.73 degC), (10.00 m, 14.32 degC), (20.00 m, 13.83 degC), (30.00 m, 13.37 degC)
2018-09-07T22:31:01.512Z,1536359461.512 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:31:22.263Z,1536359482.263 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:32:23.067Z,1536359543.067 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:32:49.109Z,1536359569.109 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.14 from mean 15.04 degC, variance 0.03 degC^2, standard deviation 0.17 degC, and samples: (5.00 m, 14.76 degC), (10.00 m, 15.05 degC), (20.00 m, 15.15 degC), (30.00 m, 15.21 degC)
2018-09-07T22:32:49.110Z,1536359569.110 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:33:23.451Z,1536359603.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:34:23.851Z,1536359663.851 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:35:23.462Z,1536359723.462 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:36:23.855Z,1536359783.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:36:30.286Z,1536359790.286 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.60 from mean 14.09 degC, variance 0.40 degC^2, standard deviation 0.63 degC, and samples: (5.00 m, 14.77 degC), (10.00 m, 14.63 degC), (20.00 m, 13.73 degC), (30.00 m, 13.25 degC)
2018-09-07T22:36:30.287Z,1536359790.287 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:37:24.264Z,1536359844.264 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:38:15.103Z,1536359895.103 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.12 from mean 15.05 degC, variance 0.02 degC^2, standard deviation 0.14 degC, and samples: (5.00 m, 14.83 degC), (10.00 m, 15.05 degC), (20.00 m, 15.22 degC), (30.00 m, 15.12 degC)
2018-09-07T22:38:15.104Z,1536359895.104 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:38:24.259Z,1536359904.259 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:39:24.655Z,1536359964.655 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:40:25.058Z,1536360025.058 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:41:25.451Z,1536360085.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:41:53.106Z,1536360113.106 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.59 from mean 14.02 degC, variance 0.38 degC^2, standard deviation 0.62 degC, and samples: (5.00 m, 14.69 degC), (10.00 m, 14.51 degC), (20.00 m, 13.69 degC), (30.00 m, 13.16 degC)
2018-09-07T22:41:53.107Z,1536360113.107 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:42:25.056Z,1536360145.056 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:43:25.451Z,1536360205.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:43:38.298Z,1536360218.298 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 15.03 degC, variance 0.04 degC^2, standard deviation 0.20 degC, and samples: (5.00 m, 14.73 degC), (10.00 m, 14.98 degC), (20.00 m, 15.22 degC), (30.00 m, 15.18 degC)
2018-09-07T22:43:38.299Z,1536360218.299 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:44:25.855Z,1536360265.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:45:25.455Z,1536360325.455 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:46:25.859Z,1536360385.859 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:47:17.503Z,1536360437.503 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.56 from mean 14.16 degC, variance 0.37 degC^2, standard deviation 0.61 degC, and samples: (5.00 m, 14.79 degC), (10.00 m, 14.65 degC), (20.00 m, 13.95 degC), (30.00 m, 13.26 degC)
2018-09-07T22:47:17.504Z,1536360437.504 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:47:26.259Z,1536360446.259 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:48:26.254Z,1536360506.254 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:49:00.695Z,1536360540.695 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.16 from mean 15.11 degC, variance 0.03 degC^2, standard deviation 0.17 degC, and samples: (5.00 m, 14.86 degC), (10.00 m, 15.05 degC), (20.00 m, 15.30 degC), (30.00 m, 15.25 degC)
2018-09-07T22:49:00.696Z,1536360540.696 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:49:26.655Z,1536360566.655 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:50:27.052Z,1536360627.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:51:26.661Z,1536360686.661 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:52:27.060Z,1536360747.060 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:52:40.691Z,1536360760.691 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.53 from mean 14.27 degC, variance 0.35 degC^2, standard deviation 0.59 degC, and samples: (5.00 m, 14.86 degC), (10.00 m, 14.75 degC), (20.00 m, 14.11 degC), (30.00 m, 13.37 degC)
2018-09-07T22:52:40.691Z,1536360760.691 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:53:27.451Z,1536360807.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:54:25.503Z,1536360865.503 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 15.13 degC, variance 0.03 degC^2, standard deviation 0.18 degC, and samples: (5.00 m, 14.88 degC), (10.00 m, 15.05 degC), (20.00 m, 15.31 degC), (30.00 m, 15.30 degC)
2018-09-07T22:54:25.513Z,1536360865.513 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:54:27.456Z,1536360867.456 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:55:27.469Z,1536360927.469 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:56:27.859Z,1536360987.859 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:57:27.851Z,1536361047.851 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:58:10.288Z,1536361090.288 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.61 from mean 14.08 degC, variance 0.40 degC^2, standard deviation 0.64 degC, and samples: (5.00 m, 14.78 degC), (10.00 m, 14.60 degC), (20.00 m, 13.69 degC), (30.00 m, 13.24 degC)
2018-09-07T22:58:10.288Z,1536361090.288 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T22:58:28.258Z,1536361108.258 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:59:28.651Z,1536361168.651 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T22:59:53.507Z,1536361193.507 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.13 from mean 15.05 degC, variance 0.03 degC^2, standard deviation 0.16 degC, and samples: (5.00 m, 14.80 degC), (10.00 m, 15.03 degC), (20.00 m, 15.22 degC), (30.00 m, 15.15 degC)
2018-09-07T22:59:53.508Z,1536361193.508 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:00:28.657Z,1536361228.657 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:01:29.055Z,1536361289.055 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:02:28.656Z,1536361348.656 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:03:29.054Z,1536361409.054 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:03:35.097Z,1536361415.097 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.59 from mean 13.68 degC, variance 0.38 degC^2, standard deviation 0.62 degC, and samples: (5.00 m, 14.46 degC), (10.00 m, 14.08 degC), (20.00 m, 13.27 degC), (30.00 m, 12.92 degC)
2018-09-07T23:03:35.098Z,1536361415.098 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:04:29.459Z,1536361469.459 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:05:18.694Z,1536361518.694 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.17 from mean 14.94 degC, variance 0.03 degC^2, standard deviation 0.18 degC, and samples: (5.00 m, 14.68 degC), (10.00 m, 14.87 degC), (20.00 m, 15.13 degC), (30.00 m, 15.08 degC)
2018-09-07T23:05:18.695Z,1536361518.695 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:05:29.860Z,1536361529.860 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:06:29.855Z,1536361589.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:07:30.255Z,1536361650.255 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:08:30.251Z,1536361710.251 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:09:08.298Z,1536361748.298 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.70 from mean 13.88 degC, variance 0.53 degC^2, standard deviation 0.73 degC, and samples: (5.00 m, 14.70 degC), (10.00 m, 14.46 degC), (20.00 m, 13.44 degC), (30.00 m, 12.92 degC)
2018-09-07T23:09:08.299Z,1536361748.299 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:09:30.663Z,1536361770.663 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:10:31.051Z,1536361831.051 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:11:31.458Z,1536361891.458 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:12:31.455Z,1536361951.455 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:13:31.851Z,1536362011.851 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:14:29.493Z,1536362069.493 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.23 from mean 14.39 degC, variance 0.06 degC^2, standard deviation 0.25 degC, and samples: (5.00 m, 14.57 degC), (10.00 m, 14.67 degC), (20.00 m, 14.31 degC), (30.00 m, 14.01 degC)
2018-09-07T23:14:29.494Z,1536362069.494 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:14:31.862Z,1536362071.862 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:15:31.859Z,1536362131.859 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:16:13.094Z,1536362173.094 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): calculated 0.16 from mean 15.00 degC, variance 0.03 degC^2, standard deviation 0.19 degC, and samples: (5.00 m, 14.71 degC), (10.00 m, 14.96 degC), (20.00 m, 15.14 degC), (30.00 m, 15.19 degC)
2018-09-07T23:16:13.095Z,1536362173.095 [VerticalTemperatureHomogeneityIndexCalculator](DEBUG): (re)initializing
2018-09-07T23:16:32.251Z,1536362192.251 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:17:32.664Z,1536362252.664 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:18:32.262Z,1536362312.262 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:18:47.130Z,1536362327.130 [sci2:Lap:Wpt1:A.Waypoint](IMPORTANT): Reached Waypoint: 36.983002,-122.520002
2018-09-07T23:18:47.130Z,1536362327.130 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-07T23:18:47.130Z,1536362327.130 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:18:47.130Z,1536362327.130 [sci2:Lap:Wpt1](INFO): Completed sci2:Lap:Wpt1
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt1] Stopped
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt2] Running Loop=1
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt2](DEBUG): Aggregate::initialize sci2:Lap:Wpt2
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt2:A.Waypoint] Running Loop=1
2018-09-07T23:18:47.131Z,1536362327.131 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:22.320Z,1536362362.320 [sci2:NeedComms] Running Loop=1
2018-09-07T23:19:22.320Z,1536362362.320 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-07T23:19:22.320Z,1536362362.320 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-07T23:19:22.320Z,1536362362.320 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T23:19:22.321Z,1536362362.321 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-07T23:19:22.321Z,1536362362.321 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-07T23:19:22.322Z,1536362362.322 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-07T23:19:22.322Z,1536362362.322 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T23:19:22.322Z,1536362362.322 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T23:19:22.323Z,1536362362.323 [sci2:NeedComms:A] Running Loop=1
2018-09-07T23:19:22.324Z,1536362362.324 [sci2:NeedComms:A](INFO): last time_fix was: 1536358756.000000 second since 1970/01/01T00:00:00Z 
2018-09-07T23:19:22.325Z,1536362362.325 [sci2:NeedComms:A] Stopped
2018-09-07T23:19:32.668Z,1536362372.668 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:19:47.910Z,1536362387.910 [sci2:Lap:Wpt2:A.Waypoint] Stopped
2018-09-07T23:19:47.910Z,1536362387.910 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt2](INFO): Completed sci2:Lap:Wpt2
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt2] Stopped
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt2](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt2
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt3] Running Loop=1
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt3](DEBUG): Aggregate::initialize sci2:Lap:Wpt3
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt3:A.Waypoint] Running Loop=1
2018-09-07T23:19:47.911Z,1536362387.911 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:48.335Z,1536362388.335 [sci2:Lap:Wpt3:A.Waypoint] Stopped
2018-09-07T23:19:48.335Z,1536362388.335 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:48.335Z,1536362388.335 [sci2:Lap:Wpt3](INFO): Completed sci2:Lap:Wpt3
2018-09-07T23:19:48.335Z,1536362388.335 [sci2:Lap:Wpt3] Stopped
2018-09-07T23:19:48.335Z,1536362388.335 [sci2:Lap:Wpt3](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt3
2018-09-07T23:19:48.336Z,1536362388.336 [sci2:Lap:Wpt4] Running Loop=1
2018-09-07T23:19:48.336Z,1536362388.336 [sci2:Lap:Wpt4](DEBUG): Aggregate::initialize sci2:Lap:Wpt4
2018-09-07T23:19:48.336Z,1536362388.336 [sci2:Lap:Wpt4:A.Waypoint] Running Loop=1
2018-09-07T23:19:48.336Z,1536362388.336 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt4:A.Waypoint] Stopped
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt4](INFO): Completed sci2:Lap:Wpt4
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt4] Stopped
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt4](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt4
2018-09-07T23:19:48.720Z,1536362388.720 [sci2:Lap:Wpt5] Running Loop=1
2018-09-07T23:19:48.721Z,1536362388.721 [sci2:Lap:Wpt5](DEBUG): Aggregate::initialize sci2:Lap:Wpt5
2018-09-07T23:19:48.721Z,1536362388.721 [sci2:Lap:Wpt5:A.Waypoint] Running Loop=1
2018-09-07T23:19:48.721Z,1536362388.721 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:49.131Z,1536362389.131 [sci2:Lap:Wpt5:A.Waypoint] Stopped
2018-09-07T23:19:49.131Z,1536362389.131 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:49.131Z,1536362389.131 [sci2:Lap:Wpt5](INFO): Completed sci2:Lap:Wpt5
2018-09-07T23:19:49.131Z,1536362389.131 [sci2:Lap:Wpt5] Stopped
2018-09-07T23:19:49.131Z,1536362389.131 [sci2:Lap:Wpt5](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt5
2018-09-07T23:19:49.132Z,1536362389.132 [sci2:Lap:Wpt6] Running Loop=1
2018-09-07T23:19:49.132Z,1536362389.132 [sci2:Lap:Wpt6](DEBUG): Aggregate::initialize sci2:Lap:Wpt6
2018-09-07T23:19:49.132Z,1536362389.132 [sci2:Lap:Wpt6:A.Waypoint] Running Loop=1
2018-09-07T23:19:49.132Z,1536362389.132 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:49.533Z,1536362389.533 [sci2:Lap:Wpt6:A.Waypoint] Stopped
2018-09-07T23:19:49.533Z,1536362389.533 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:49.533Z,1536362389.533 [sci2:Lap:Wpt6](INFO): Completed sci2:Lap:Wpt6
2018-09-07T23:19:49.533Z,1536362389.533 [sci2:Lap:Wpt6] Stopped
2018-09-07T23:19:49.533Z,1536362389.533 [sci2:Lap:Wpt6](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt6
2018-09-07T23:19:49.534Z,1536362389.533 [sci2:Lap:Wpt7] Running Loop=1
2018-09-07T23:19:49.534Z,1536362389.534 [sci2:Lap:Wpt7](DEBUG): Aggregate::initialize sci2:Lap:Wpt7
2018-09-07T23:19:49.534Z,1536362389.534 [sci2:Lap:Wpt7:A.Waypoint] Running Loop=1
2018-09-07T23:19:49.534Z,1536362389.534 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-07T23:19:49.942Z,1536362389.942 [sci2:Lap:Wpt7:A.Waypoint] Stopped
2018-09-07T23:19:49.942Z,1536362389.942 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-07T23:19:49.943Z,1536362389.943 [sci2:Lap:Wpt7](INFO): Completed sci2:Lap:Wpt7
2018-09-07T23:19:49.943Z,1536362389.943 [sci2:Lap:Wpt7] Stopped
2018-09-07T23:19:49.943Z,1536362389.943 [sci2:Lap:Wpt7](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt7
2018-09-07T23:19:49.943Z,1536362389.943 [sci2:Lap](INFO): Completed sci2:Lap
2018-09-07T23:19:49.943Z,1536362389.943 [sci2:Lap] Stopped
2018-09-07T23:19:49.944Z,1536362389.944 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-07T23:19:49.969Z,1536362389.969 [sci2](INFO): Completed sci2
2018-09-07T23:19:49.969Z,1536362389.969 [MissionManager](INFO): sci2 is completed.
2018-09-07T23:19:49.969Z,1536362389.969 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-07T23:19:49.969Z,1536362389.969 [sci2] Stopped
2018-09-07T23:19:49.969Z,1536362389.969 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:C] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:D] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:G] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:PeakDetectChl] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-07T23:19:49.970Z,1536362389.970 [sci2:NeedComms] Stopped
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes] Stopped
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-07T23:19:49.971Z,1536362389.971 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:I.Pitch] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:J.Buoyancy] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:K.SetSpeed] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:L.DepthEnvelope] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:M.AltitudeEnvelope] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:N.YoYo] Stopped
2018-09-07T23:19:49.972Z,1536362389.972 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-07T23:19:50.130Z,1536362390.130 [WetLabsBB2FL](INFO): Powering down
2018-09-07T23:19:50.326Z,1536362390.326 [MissionManager](IMPORTANT): Started mission Default
2018-09-07T23:19:50.326Z,1536362390.326 [Default] Running Loop=1
2018-09-07T23:19:50.327Z,1536362390.327 [Default](DEBUG): Aggregate::initialize Default
2018-09-07T23:19:50.327Z,1536362390.327 [Default:B.GoToSurface] Running Loop=1
2018-09-07T23:19:50.327Z,1536362390.327 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-07T23:19:50.327Z,1536362390.327 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-07T23:19:50.327Z,1536362390.327 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-07T23:19:50.328Z,1536362390.328 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-07T23:19:50.328Z,1536362390.328 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-07T23:19:50.328Z,1536362390.328 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-07T23:19:50.337Z,1536362390.337 [Default:A.Wait] Running Loop=1
2018-09-07T23:19:50.337Z,1536362390.337 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-07T23:19:50.552Z,1536362390.552 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T23:19:50.552Z,1536362390.552 [CTD_Seabird](INFO): Powering down
2018-09-07T23:19:50.714Z,1536362390.714 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -35.00 mm (3 active estimators).
2018-09-07T23:19:50.957Z,1536362390.957 [CTD_Seabird](FAULT): LCB fault:  Software Overcurrent.
2018-09-07T23:19:50.957Z,1536362390.957 [CTD_Seabird] Hardware Fault, FailCount= 1
2018-09-07T23:19:50.958Z,1536362390.958 [CTD_Seabird](ERROR): Hardware Fault
2018-09-07T23:19:51.193Z,1536362391.193 [CBIT](ERROR): Hardware Fault in component: CTD_Seabird
2018-09-07T23:19:51.679Z,1536362391.679 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2018-09-07T23:19:51.679Z,1536362391.679 [CTD_Seabird] No Fault, FailCount= 1
2018-09-07T23:19:51.765Z,1536362391.765 [CTD_Seabird](INFO): Initializing
2018-09-07T23:19:51.766Z,1536362391.766 [CTD_Seabird](INFO): Checking LCM
2018-09-07T23:19:51.766Z,1536362391.766 [CTD_Seabird](INFO): LCM OK
2018-09-07T23:19:51.766Z,1536362391.766 [CTD_Seabird](INFO): Powering up
2018-09-07T23:19:57.113Z,1536362397.113 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T23:19:57.175Z,1536362397.175 [CTD_Seabird](INFO): Started Seabird LCM interface with command:nohup ./lrauv-framework/onboard/bin/gpctd -ldir /mnt/mmc/LRAUV/Logs/latest/ -dev /dev/ttyC6 -b 9600 >& /dev/null &
2018-09-07T23:19:57.176Z,1536362397.176 [CTD_Seabird](INFO): LCM subscribed to channel:seabird_gpctd_t.seabird-gpctd
2018-09-07T23:19:57.528Z,1536362397.528 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T23:19:57.528Z,1536362397.528 [CTD_Seabird](INFO): Powering down
2018-09-07T23:20:03.721Z,1536362403.721 [Default:A.Wait](INFO): Done Waiting.
2018-09-07T23:20:03.722Z,1536362403.722 [Default:A.Wait] Stopped
2018-09-07T23:20:03.722Z,1536362403.722 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-07T23:20:32.870Z,1536362432.870 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:21:32.867Z,1536362492.867 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:22:28.109Z,1536362548.109 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 2.00 mm.
2018-09-07T23:22:28.118Z,1536362548.118 [Default:CheckIn] Running Loop=1
2018-09-07T23:22:28.118Z,1536362548.118 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-07T23:22:28.118Z,1536362548.118 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-07T23:22:28.350Z,1536362548.350 [Radio_Surface](INFO): Powering up
2018-09-07T23:22:28.873Z,1536362548.873 [NAL9602](INFO): Powering up
2018-09-07T23:22:33.044Z,1536362553.044 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:22:39.846Z,1536362559.846 [NAL9602](INFO): NAL9602 initialized
2018-09-07T23:23:01.048Z,1536362581.048 [NAL9602](INFO): SBD MO Status=2, MOMSN=48577, MT Status=2, MTMSN=0
2018-09-07T23:23:01.048Z,1536362581.048 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:23:33.043Z,1536362613.043 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:23:42.247Z,1536362622.247 [NAL9602](INFO): SBD MO Status=0, MOMSN=48577, MT Status=0, MTMSN=0
2018-09-07T23:23:42.247Z,1536362622.247 [NAL9602](INFO): No messages in MT queue
2018-09-07T23:24:33.439Z,1536362673.439 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:25:33.840Z,1536362733.840 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:26:33.841Z,1536362793.841 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:27:28.314Z,1536362848.314 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-07T23:22:28.1Z
2018-09-07T23:27:28.314Z,1536362848.314 [Default:CheckIn:Read_GPS] Stopped
2018-09-07T23:27:28.314Z,1536362848.314 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-07T23:27:34.639Z,1536362854.639 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:27:49.967Z,1536362869.967 [NAL9602](INFO): SBD MO Status=1, MOMSN=48578, MT Status=0, MTMSN=0
2018-09-07T23:27:50.025Z,1536362870.025 [NAL9602](INFO): Sent 79 bytes from file Logs/20180907T190331/Courier0034.lzma
2018-09-07T23:27:50.025Z,1536362870.025 [NAL9602](INFO): Packets left to send: 0
2018-09-07T23:27:50.027Z,1536362870.027 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Courier0034.lzma.parts/0000.sbd
2018-09-07T23:27:50.027Z,1536362870.027 [NAL9602](DEBUG): Completed sending Logs/20180907T190331/Courier0034.lzma
2018-09-07T23:28:16.917Z,1536362896.917 [NAL9602](INFO): SBD MO Status=2, MOMSN=48579, MT Status=2, MTMSN=0
2018-09-07T23:28:16.917Z,1536362896.917 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:28:34.615Z,1536362914.615 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:28:48.228Z,1536362928.228 [NAL9602](INFO): SBD MO Status=1, MOMSN=48579, MT Status=0, MTMSN=0
2018-09-07T23:28:48.287Z,1536362928.287 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:28:48.287Z,1536362928.287 [NAL9602](INFO): Packets left to send: 6
2018-09-07T23:28:48.288Z,1536362928.288 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0006.sbd
2018-09-07T23:29:23.139Z,1536362963.139 [NAL9602](INFO): SBD MO Status=1, MOMSN=48580, MT Status=0, MTMSN=0
2018-09-07T23:29:23.193Z,1536362963.193 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:29:23.193Z,1536362963.193 [NAL9602](INFO): Packets left to send: 5
2018-09-07T23:29:23.195Z,1536362963.195 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0005.sbd
2018-09-07T23:29:34.869Z,1536362974.869 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:29:52.872Z,1536362992.872 [NAL9602](INFO): SBD MO Status=1, MOMSN=48581, MT Status=0, MTMSN=0
2018-09-07T23:29:52.921Z,1536362992.921 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:29:52.921Z,1536362992.921 [NAL9602](INFO): Packets left to send: 4
2018-09-07T23:29:52.923Z,1536362992.923 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0004.sbd
2018-09-07T23:30:08.972Z,1536363008.972 [NAL9602](INFO): SBD MO Status=2, MOMSN=48582, MT Status=2, MTMSN=0
2018-09-07T23:30:08.972Z,1536363008.972 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:30:35.055Z,1536363035.055 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:31:08.659Z,1536363068.659 [NAL9602](INFO): SBD MO Status=2, MOMSN=48582, MT Status=0, MTMSN=0
2018-09-07T23:31:08.659Z,1536363068.659 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:31:30.792Z,1536363090.792 [NAL9602](INFO): SBD MO Status=1, MOMSN=48582, MT Status=0, MTMSN=0
2018-09-07T23:31:30.841Z,1536363090.841 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:31:30.841Z,1536363090.841 [NAL9602](INFO): Packets left to send: 3
2018-09-07T23:31:30.843Z,1536363090.843 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0003.sbd
2018-09-07T23:31:35.303Z,1536363095.303 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:31:44.913Z,1536363104.913 [NAL9602](INFO): SBD MO Status=2, MOMSN=48583, MT Status=2, MTMSN=0
2018-09-07T23:31:44.913Z,1536363104.913 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:32:11.812Z,1536363131.812 [NAL9602](INFO): SBD MO Status=2, MOMSN=48583, MT Status=2, MTMSN=0
2018-09-07T23:32:11.812Z,1536363131.812 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:32:35.503Z,1536363155.503 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-07T23:32:35.903Z,1536363155.903 [NAL9602](INFO): SBD MO Status=2, MOMSN=48583, MT Status=2, MTMSN=0
2018-09-07T23:32:35.904Z,1536363155.904 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-07T23:33:12.425Z,1536363192.425 [NAL9602](INFO): SBD MO Status=1, MOMSN=48583, MT Status=0, MTMSN=0
2018-09-07T23:33:12.473Z,1536363192.473 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:33:12.474Z,1536363192.474 [NAL9602](INFO): Packets left to send: 2
2018-09-07T23:33:12.475Z,1536363192.475 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0002.sbd
2018-09-07T23:33:24.135Z,1536363204.135 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=48584, MT Status=1, MTMSN=1411
2018-09-07T23:33:24.185Z,1536363204.185 [NAL9602](INFO): Sent 332 bytes from file Logs/20180907T190331/Express0035.lzma
2018-09-07T23:33:24.185Z,1536363204.185 [NAL9602](INFO): Packets left to send: 1
2018-09-07T23:33:24.187Z,1536363204.187 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180907T190331/Express0035.lzma.parts/0001.sbd
2018-09-07T23:33:24.609Z,1536363204.609 [NAL9602](INFO): Received command:restart sys
2018-09-07T23:33:24.654Z,1536363204.654 [CommandLine](IMPORTANT): got command restart system
2018-09-07T23:33:26.977Z,1536363206.977 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-09-07T23:33:26.982Z,1536363206.982 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:26.982Z,1536363206.982 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.153Z,1536363207.153 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-09-07T23:33:27.153Z,1536363207.153 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.154Z,1536363207.154 [CommandLine](INFO): Join timeout helper Thread ID is 3338
2018-09-07T23:33:27.154Z,1536363207.154 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-09-07T23:33:27.154Z,1536363207.154 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.155Z,1536363207.155 [NavChartDb](INFO): Join timeout helper Thread ID is 3339
2018-09-07T23:33:27.229Z,1536363207.229 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:27.229Z,1536363207.229 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.233Z,1536363207.233 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-09-07T23:33:27.233Z,1536363207.233 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.233Z,1536363207.233 [Radio_Surface](INFO): Join timeout helper Thread ID is 3340
2018-09-07T23:33:27.577Z,1536363207.577 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:27.577Z,1536363207.577 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.589Z,1536363207.589 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2018-09-07T23:33:27.589Z,1536363207.589 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.590Z,1536363207.590 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 3341
2018-09-07T23:33:27.933Z,1536363207.933 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:27.933Z,1536363207.933 [WetLabsBB2FL](INFO): Powering down
2018-09-07T23:33:27.934Z,1536363207.934 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.941Z,1536363207.941 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2018-09-07T23:33:27.941Z,1536363207.941 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:27.941Z,1536363207.941 [CTD_Seabird](INFO): Join timeout helper Thread ID is 3342
2018-09-07T23:33:27.981Z,1536363207.981 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:28.070Z,1536363208.070 [CTD_Seabird](INFO): Stopping potential previous instance(s) of CTD_Seabird LCM interface
2018-09-07T23:33:28.070Z,1536363208.070 [CTD_Seabird](INFO): Powering down
2018-09-07T23:33:28.071Z,1536363208.071 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.082Z,1536363208.082 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-09-07T23:33:28.082Z,1536363208.082 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.083Z,1536363208.083 [logger](INFO): Join timeout helper Thread ID is 3344
2018-09-07T23:33:28.085Z,1536363208.085 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:28.085Z,1536363208.085 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.102Z,1536363208.102 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-09-07T23:33:28.102Z,1536363208.102 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.102Z,1536363208.102 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-09-07T23:33:28.102Z,1536363208.102 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.103Z,1536363208.103 [controlThread](INFO): Join timeout helper Thread ID is 3345
2018-09-07T23:33:28.105Z,1536363208.105 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-07T23:33:28.105Z,1536363208.105 [controlThread](DEBUG): Uninitializing ControlThread
2018-09-07T23:33:28.108Z,1536363208.108 [AHRS_M2](INFO): Powering down
2018-09-07T23:33:28.182Z,1536363208.182 [NAL9602](INFO): Powering down
2018-09-07T23:33:28.184Z,1536363208.184 [DAT](INFO): Powering down
2018-09-07T23:33:28.302Z,1536363208.302 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-07T23:33:28.303Z,1536363208.303 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-09-07T23:33:28.304Z,1536363208.304 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-09-07T23:33:28.304Z,1536363208.304 [MissionManager](INFO): Uninitializing Mission Default
2018-09-07T23:33:28.304Z,1536363208.304 [Default] Stopped
2018-09-07T23:33:28.305Z,1536363208.305 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-07T23:33:28.305Z,1536363208.305 [Default:B.GoToSurface] Stopped
2018-09-07T23:33:28.305Z,1536363208.305 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-07T23:33:28.305Z,1536363208.305 [Default:CheckIn] Stopped
2018-09-07T23:33:28.305Z,1536363208.305 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-07T23:33:28.305Z,1536363208.305 [Default:CheckIn:Read_Iridium] Stopped
2018-09-07T23:33:28.310Z,1536363208.310 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-09-07T23:33:28.310Z,1536363208.310 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-09-07T23:33:28.311Z,1536363208.311 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-09-07T23:33:28.311Z,1536363208.311 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-09-07T23:33:28.311Z,1536363208.311 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-07T23:33:28.312Z,1536363208.312 [BuoyancyServo](INFO): Powering down
2018-09-07T23:33:28.325Z,1536363208.325 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-09-07T23:33:28.325Z,1536363208.325 [ElevatorServo](INFO): Powering down
2018-09-07T23:33:28.326Z,1536363208.326 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-09-07T23:33:28.326Z,1536363208.326 [MassServo](INFO): Powering down
2018-09-07T23:33:28.327Z,1536363208.327 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-09-07T23:33:28.327Z,1536363208.327 [RudderServo](INFO): Powering down
2018-09-07T23:33:28.328Z,1536363208.328 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-07T23:33:28.328Z,1536363208.328 [ThrusterServo](INFO): Powering down
2018-09-07T23:33:28.330Z,1536363208.330 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-09-07T23:33:28.330Z,1536363208.330 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-09-07T23:33:28.330Z,1536363208.330 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-09-07T23:33:28.331Z,1536363208.331 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.371Z,1536363208.371 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.378Z,1536363208.378 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.472Z,1536363208.472 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.543Z,1536363208.543 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-07T23:33:28.619Z,1536363208.619 [logger ThreadHandler](INFO): Thread cancelled.