INFO 2019-01-02 21:45:52,927Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T032613/201608170326_201608172343.nc4 file...
INFO 2019-01-02 21:46:49,961Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 21:46:53,304Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 21:46:56,702Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 21:47:00,122Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2019-01-02 21:47:00,151Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 21:47:03,493Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 21:47:06,855Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 21:47:10,200Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2019-01-02 21:47:11,506Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2019-01-02 21:47:20,048Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-01-02 21:47:28,123Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-01-02 21:47:28,123Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T032613/201608170326_201608172343.nc4
INFO 2019-01-02 21:47:31,801Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR
INFO 2019-01-02 21:47:52,328Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-01-02 21:48:10,425Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2019-01-02 21:48:25,876Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2019-01-02 21:48:25,956Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-01-02 21:48:26,032Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2019-01-02 21:48:26,070Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-01-02 21:48:26,087Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-01-02 21:48:26,116Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-01-02 21:48:26,175Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current
INFO 2019-01-02 21:48:26,375Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-01-02 21:48:26,725Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-01-02 21:48:26,782Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-01-02 21:48:27,374Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-01-02 21:48:30,732Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-01-02 21:48:34,331Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 21:48:38,016Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 21:48:41,690Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-01-02 21:48:41,695Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T032613/201608170326_201608172343.nc4
INFO 2019-01-02 21:48:45,780Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-01-02 21:48:45,783Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -       164    1.11              -              -
WARNING 2019-01-02 21:48:45,785Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.293002844) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,800Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.293    0.0004782    0.0000169      1097    9.08           0.21           0.35
WARNING 2019-01-02 21:48:45,805Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.295351029) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,806Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.295    0.0002558   -0.0000106       145    1.42          -0.83          -1.38
WARNING 2019-01-02 21:48:45,810Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (4965.223681927) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,811Z lrauvNc4ToNetcdf.py nudge_coords():589    2:     4965.224   -0.0044776    0.0044148      6902   46.12          10.56          17.74
WARNING 2019-01-02 21:48:45,816Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.342031002) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,817Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.342    0.0000186   -0.0000359       347    2.78          -1.42          -2.39
WARNING 2019-01-02 21:48:45,821Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.311100959) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,822Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.311    0.0201357   -0.0051241     19345  129.06          -4.36          -7.36
WARNING 2019-01-02 21:48:45,828Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.275418997) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,829Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.275    0.0038254    0.0030986      1224    9.21          36.95          62.32
WARNING 2019-01-02 21:48:45,833Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.322623967) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,834Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.323    0.0090125    0.0042651     18882  126.11           3.49           6.27
WARNING 2019-01-02 21:48:45,840Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346131085) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,841Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        0.346    0.0012406   -0.0015594       385    3.33         -48.43         -86.81
WARNING 2019-01-02 21:48:45,845Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.273912907) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,846Z lrauvNc4ToNetcdf.py nudge_coords():589    8:        0.274    0.0070383    0.0005736     19107  127.91           0.42           0.83
WARNING 2019-01-02 21:48:45,852Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.341222047) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,853Z lrauvNc4ToNetcdf.py nudge_coords():589    9:        0.341   -0.0000479    0.0000159       525    4.21           0.36           0.70
WARNING 2019-01-02 21:48:45,857Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (2256.374262094) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,859Z lrauvNc4ToNetcdf.py nudge_coords():589   10:     2256.374    0.0019980    0.0052628     13830   92.36           5.03          10.56
WARNING 2019-01-02 21:48:45,865Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.225618839) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,866Z lrauvNc4ToNetcdf.py nudge_coords():589   11:        0.226    0.0002550    0.0003569      3260   24.98           1.26           2.65
WARNING 2019-01-02 21:48:45,871Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.331767082) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,872Z lrauvNc4ToNetcdf.py nudge_coords():589   12:        0.332    0.0000372   -0.0000576       808    6.07          -0.84          -1.76
WARNING 2019-01-02 21:48:45,876Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.350746871) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,877Z lrauvNc4ToNetcdf.py nudge_coords():589   13:        0.351   -0.0000083    0.0001525       973    7.25           1.86           3.90
WARNING 2019-01-02 21:48:45,881Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.195434093) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,882Z lrauvNc4ToNetcdf.py nudge_coords():589   14:        0.195   -0.0000189   -0.0000630       849    6.55          -0.85          -1.78
WARNING 2019-01-02 21:48:45,886Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.312058926) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,887Z lrauvNc4ToNetcdf.py nudge_coords():589   15:        0.312    0.0000793    0.0000294       316    3.18           0.82           1.72
WARNING 2019-01-02 21:48:45,891Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.263708114) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,892Z lrauvNc4ToNetcdf.py nudge_coords():589   16:        0.264    0.0000088    0.0001544       153    2.43           5.61          11.78
WARNING 2019-01-02 21:48:45,896Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.3115592) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,897Z lrauvNc4ToNetcdf.py nudge_coords():589   17:        0.312    0.0037741    0.0140234     20489  137.11           8.00          18.95
WARNING 2019-01-02 21:48:45,904Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338372946) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,905Z lrauvNc4ToNetcdf.py nudge_coords():589   18:        0.338    0.0000284    0.0000024       324    2.96           0.06           0.15
WARNING 2019-01-02 21:48:45,909Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.306797028) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,910Z lrauvNc4ToNetcdf.py nudge_coords():589   19:        0.307    0.0000722    0.0000484       238    2.21           1.71           4.05
WARNING 2019-01-02 21:48:45,914Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.314930916) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,916Z lrauvNc4ToNetcdf.py nudge_coords():589   20:        0.315   -0.0056031   -0.0130234     20251  135.26          -7.52         -17.84
WARNING 2019-01-02 21:48:45,922Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.300171137) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,923Z lrauvNc4ToNetcdf.py nudge_coords():589   21:        0.300    0.0001490    0.0000146       332    2.69           0.42           1.00
WARNING 2019-01-02 21:48:45,927Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.369903088) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,929Z lrauvNc4ToNetcdf.py nudge_coords():589   22:        0.370   -0.0286704    0.0199670     20416  136.19          11.45          27.17
WARNING 2019-01-02 21:48:45,935Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.357615948) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,937Z lrauvNc4ToNetcdf.py nudge_coords():589   23:        0.358    0.0007107    0.0000396       838    6.32           0.49           1.16
WARNING 2019-01-02 21:48:45,941Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.30579114) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,943Z lrauvNc4ToNetcdf.py nudge_coords():589   24:        0.306   -0.0000463    0.0000041       286    2.98           0.11           0.26
WARNING 2019-01-02 21:48:45,947Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346641064) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,949Z lrauvNc4ToNetcdf.py nudge_coords():589   25:        0.347    0.0149202   -0.0027352      9417   62.98          -3.39          -8.05
WARNING 2019-01-02 21:48:45,955Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346551895) < max_sec_diff_at_end (10)
INFO 2019-01-02 21:48:45,956Z lrauvNc4ToNetcdf.py nudge_coords():589   26:        0.347    0.0000339    0.0001499       554    4.28           2.73           6.49
INFO 2019-01-02 21:48:45,961Z lrauvNc4ToNetcdf.py nudge_coords():613   28:            -            -            -        13    0.19              -              -
INFO 2019-01-02 21:48:45,961Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 161470
INFO 2019-01-02 21:48:46,005Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20160817T022614/20160818T004306/data.csv
INFO 2019-01-02 21:48:46,052Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2019-01-02 21:48:46,065Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-01-02 21:48:46,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160817T032613/201608170326_201608172343_2S_scieng.nc