INFO 2020-07-31 18:05:30,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160814T144907/201608141449_201608141452.nc4 file... INFO 2020-07-31 18:05:30,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201608141449_201608141452.nc4 INFO 2020-07-31 18:05:32,336Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160814T144907/201608141449_201608141452.nc4 INFO 2020-07-31 18:05:32,410Z lrauvNc4ToNetcdf.py createSeries():240 depth : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,481Z lrauvNc4ToNetcdf.py createSeries():240 time : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,593Z lrauvNc4ToNetcdf.py createSeries():240 depth : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,661Z lrauvNc4ToNetcdf.py createSeries():240 time : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,773Z lrauvNc4ToNetcdf.py createSeries():240 depth : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,841Z lrauvNc4ToNetcdf.py createSeries():240 time : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:32,953Z lrauvNc4ToNetcdf.py createSeries():240 depth : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,021Z lrauvNc4ToNetcdf.py createSeries():240 time : 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,071Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-31 18:05:33,077Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:05:33,079Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:05:33,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:05:33,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:05:33,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:05:33,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:05:33,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:05:33,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:05:33,108Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-31 18:05:33,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_salinity empty so skipping INFO 2020-07-31 18:05:33,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_temperature empty so skipping INFO 2020-07-31 18:05:33,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_salinity empty so skipping INFO 2020-07-31 18:05:33,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-07-31 18:05:33,122Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_temperature empty so skipping INFO 2020-07-31 18:05:33,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-07-31 18:05:33,126Z lrauvNc4ToNetcdf.py createSeries():240 downwelling_photosynthetic_photon_flux_in_sea_water: 77 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-31 18:05:33,144Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:05:33,150Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-31 18:05:33,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-31 18:05:33,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:05:33,162Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:05:33,170Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_charge empty so skipping INFO 2020-07-31 18:05:33,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_voltage empty so skipping INFO 2020-07-31 18:05:33,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable time_fix empty so skipping INFO 2020-07-31 18:05:33,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude_fix empty so skipping INFO 2020-07-31 18:05:33,185Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude_fix empty so skipping INFO 2020-07-31 18:05:33,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_average_current empty so skipping INFO 2020-07-31 18:05:33,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-07-31 18:05:33,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-31 18:05:33,208Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-31 18:05:33,214Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-31 18:05:33,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-31 18:05:33,247Z lrauvNc4ToNetcdf.py createSeries():240 platform_pitch_angle: 76 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,300Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:33,324Z lrauvNc4ToNetcdf.py createSeries():240 platform_roll_angle: 76 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,376Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:33,400Z lrauvNc4ToNetcdf.py createSeries():240 platform_orientation: 76 v_t values found before 2016-08-14 14:49:00 and after 2016-08-14 14:52:00 INFO 2020-07-31 18:05:33,452Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:33,453Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160814T144907/201608141449_201608141452.nc4 INFO 2020-07-31 18:05:33,567Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-07-31 18:05:33,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1148 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-07-31 18:05:33,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1149 Not creating /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160814T144907/201608141449_201608141452_2S_scieng.nc INFO 2020-07-31 18:05:33,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T111211/201608151112_201608151113.nc4 file... INFO 2020-07-31 18:05:33,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201608151112_201608151113.nc4 INFO 2020-07-31 18:05:35,180Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T111211/201608151112_201608151113.nc4 INFO 2020-07-31 18:05:35,686Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-31 18:05:35,691Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:05:35,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:05:35,696Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:05:35,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:05:35,701Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:05:35,704Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:05:35,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:05:35,709Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:05:35,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-31 18:05:35,718Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_salinity empty so skipping INFO 2020-07-31 18:05:35,720Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_temperature empty so skipping INFO 2020-07-31 18:05:35,723Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_salinity empty so skipping INFO 2020-07-31 18:05:35,726Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-07-31 18:05:35,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_temperature empty so skipping INFO 2020-07-31 18:05:35,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-07-31 18:05:35,737Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-31 18:05:35,743Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:05:35,748Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-31 18:05:35,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-31 18:05:35,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:05:35,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:05:35,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_charge empty so skipping INFO 2020-07-31 18:05:35,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_voltage empty so skipping INFO 2020-07-31 18:05:35,777Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable time_fix empty so skipping INFO 2020-07-31 18:05:35,780Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude_fix empty so skipping INFO 2020-07-31 18:05:35,782Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude_fix empty so skipping INFO 2020-07-31 18:05:35,785Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_average_current empty so skipping INFO 2020-07-31 18:05:35,788Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_buoyancy_position empty so skipping INFO 2020-07-31 18:05:35,790Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_elevator_angle empty so skipping INFO 2020-07-31 18:05:35,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_mass_position empty so skipping INFO 2020-07-31 18:05:35,799Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-31 18:05:35,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_propeller_rotation_rate empty so skipping INFO 2020-07-31 18:05:35,850Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:35,896Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:35,942Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:05:35,943Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T111211/201608151112_201608151113.nc4 INFO 2020-07-31 18:05:36,052Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-07-31 18:05:36,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1148 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-07-31 18:05:36,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1149 Not creating /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160815T111211/201608151112_201608151113_2S_scieng.nc INFO 2020-07-31 18:05:38,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160819T193439/201608191934_201608200619.nc4 file... INFO 2020-07-31 18:05:38,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201608191934_201608200619.nc4 INFO 2020-07-31 18:05:39,741Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160819T193439/201608191934_201608200619.nc4 INFO 2020-07-31 18:06:05,819Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-31 18:06:05,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2020-07-31 18:06:07,176Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-31 18:06:08,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2020-07-31 18:06:09,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources INFO 2020-07-31 18:06:09,861Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator INFO 2020-07-31 18:06:11,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator INFO 2020-07-31 18:06:12,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator INFO 2020-07-31 18:06:14,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator INFO 2020-07-31 18:06:14,945Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-31 18:06:14,967Z lrauvNc4ToNetcdf.py createSeries():240 sea_water_salinity: 13 v_t values found before 2016-08-19 19:34:00 and after 2016-08-20 06:19:00 INFO 2020-07-31 18:06:16,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2020-07-31 18:06:16,920Z lrauvNc4ToNetcdf.py createSeries():240 sea_water_temperature: 13 v_t values found before 2016-08-19 19:34:00 and after 2016-08-20 06:19:00 INFO 2020-07-31 18:06:18,834Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature INFO 2020-07-31 18:06:18,913Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter bin_mean_sea_water_salinity renaming to salinity INFO 2020-07-31 18:06:18,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter bin_median_sea_water_salinity renaming to salinity INFO 2020-07-31 18:06:19,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter bin_mean_sea_water_temperature renaming to temperature INFO 2020-07-31 18:06:19,145Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter bin_median_sea_water_temperature renaming to temperature INFO 2020-07-31 18:06:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-31 18:06:20,915Z lrauvNc4ToNetcdf.py createSeries():240 mass_concentration_of_chlorophyll_in_sea_water: 29 v_t values found before 2016-08-19 19:34:00 and after 2016-08-20 06:19:00 INFO 2020-07-31 18:06:25,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:25,505Z lrauvNc4ToNetcdf.py createSeries():240 Output470: 29 v_t values found before 2016-08-19 19:34:00 and after 2016-08-20 06:19:00 INFO 2020-07-31 18:06:29,987Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-31 18:06:30,049Z lrauvNc4ToNetcdf.py createSeries():240 Output650: 29 v_t values found before 2016-08-19 19:34:00 and after 2016-08-20 06:19:00 INFO 2020-07-31 18:06:34,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-31 18:06:34,583Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:34,666Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:34,690Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-07-31 18:06:34,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-07-31 18:06:34,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-07-31 18:06:34,722Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-07-31 18:06:34,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-07-31 18:06:34,739Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-07-31 18:06:34,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-07-31 18:06:35,052Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-31 18:06:35,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-31 18:06:35,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-31 18:06:36,804Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-31 18:06:38,534Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:40,238Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:41,941Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:41,942Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160819T193439/201608191934_201608200619.nc4 INFO 2020-07-31 18:06:44,040Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-07-31 18:06:44,042Z lrauvNc4ToNetcdf.py nudge_coords():660 - - - 0 0.00 - - - INFO 2020-07-31 18:06:44,051Z lrauvNc4ToNetcdf.py nudge_coords():686 0: 0.322 -0.0000085 0.0000938 184 1.51 4.29 11.54 2016-08-19 19:39:54.864310980 INFO 2020-07-31 18:06:44,057Z lrauvNc4ToNetcdf.py nudge_coords():686 1: 0.247 -0.0007380 -0.0001934 346 3.04 -4.38 -11.78 2016-08-19 19:42:57.853389025 INFO 2020-07-31 18:06:44,062Z lrauvNc4ToNetcdf.py nudge_coords():686 2: 0.308 -0.0005438 -0.0003973 346 3.92 -6.99 -18.77 2016-08-19 19:46:53.538965940 INFO 2020-07-31 18:06:44,067Z lrauvNc4ToNetcdf.py nudge_coords():686 3: 0.354 -0.0018669 -0.0013512 4976 33.28 -2.73 -7.52 2016-08-19 20:20:10.824753046 INFO 2020-07-31 18:06:44,073Z lrauvNc4ToNetcdf.py nudge_coords():686 4: 0.248 0.0004058 0.0000837 308 2.79 2.02 5.57 2016-08-19 20:22:58.359402895 INFO 2020-07-31 18:06:44,078Z lrauvNc4ToNetcdf.py nudge_coords():686 5: 0.271 -0.0015796 -0.0012584 5671 38.26 -2.15 -6.09 2016-08-19 21:01:14.576875925 INFO 2020-07-31 18:06:44,084Z lrauvNc4ToNetcdf.py nudge_coords():686 6: 0.294 0.0001187 0.0000979 505 4.61 1.39 3.94 2016-08-19 21:05:51.223561049 INFO 2020-07-31 18:06:44,089Z lrauvNc4ToNetcdf.py nudge_coords():686 7: 0.346 -0.0000778 0.0000423 158 1.57 1.76 5.00 2016-08-19 21:07:25.744395971 INFO 2020-07-31 18:06:44,095Z lrauvNc4ToNetcdf.py nudge_coords():686 8: 0.315 0.0013590 -0.0004386 9699 64.96 -0.42 -1.25 2016-08-19 22:12:23.514878034 INFO 2020-07-31 18:06:44,101Z lrauvNc4ToNetcdf.py nudge_coords():686 9: 0.321 0.0013552 -0.0009899 430 4.05 -15.09 -45.26 2016-08-19 22:16:27.076469898 INFO 2020-07-31 18:06:44,106Z lrauvNc4ToNetcdf.py nudge_coords():686 10: 0.371 0.0009434 -0.0001585 5043 33.82 -0.28 -0.87 2016-08-19 22:50:16.787798882 INFO 2020-07-31 18:06:44,112Z lrauvNc4ToNetcdf.py nudge_coords():686 11: 0.328 0.0006427 -0.0002304 134 1.00 -13.86 -42.63 2016-08-19 22:51:17.285083055 INFO 2020-07-31 18:06:44,117Z lrauvNc4ToNetcdf.py nudge_coords():686 12: 0.261 -0.0003503 0.0000518 899 7.23 0.43 1.33 2016-08-19 22:58:31.729654074 INFO 2020-07-31 18:06:44,123Z lrauvNc4ToNetcdf.py nudge_coords():686 13: 0.324 0.0011141 -0.0048596 14456 96.59 -2.92 -9.32 2016-08-20 00:35:07.508352995 INFO 2020-07-31 18:06:44,130Z lrauvNc4ToNetcdf.py nudge_coords():686 14: 0.312 0.0005357 -0.0002789 428 3.75 -4.31 -13.78 2016-08-20 00:38:52.984472036 INFO 2020-07-31 18:06:44,135Z lrauvNc4ToNetcdf.py nudge_coords():686 15: 0.344 0.0022690 -0.0031448 12117 81.00 -2.16 -7.19 2016-08-20 01:59:53.236021042 INFO 2020-07-31 18:06:44,141Z lrauvNc4ToNetcdf.py nudge_coords():686 16: 0.352 0.0004179 0.0001640 91 0.69 13.17 43.84 2016-08-20 02:00:35.284339905 INFO 2020-07-31 18:06:44,147Z lrauvNc4ToNetcdf.py nudge_coords():686 17: 0.279 0.0008204 0.0004929 580 5.18 5.30 17.65 2016-08-20 02:05:46.241883993 INFO 2020-07-31 18:06:44,152Z lrauvNc4ToNetcdf.py nudge_coords():686 18: 0.329 0.0037379 0.0007234 14346 96.05 0.39 1.40 2016-08-20 03:41:49.406898022 INFO 2020-07-31 18:06:44,159Z lrauvNc4ToNetcdf.py nudge_coords():686 19: 0.307 0.0000827 -0.0000038 281 2.48 -0.08 -0.29 2016-08-20 03:44:18.387113094 WARNING 2020-07-31 18:06:44,164Z lrauvNc4ToNetcdf.py nudge_coords():674 end_sec_diff (3959.396131039) > max_sec_diff_at_end (10) INFO 2020-07-31 18:06:44,165Z lrauvNc4ToNetcdf.py nudge_coords():686 20: 3959.396 -0.0012717 -0.0043248 4469 29.89 -7.42 -26.81 2016-08-20 04:14:12.240504980 INFO 2020-07-31 18:06:44,172Z lrauvNc4ToNetcdf.py nudge_coords():686 22: 0.331 -0.0008687 -0.0009108 650 4.37 -10.70 -38.63 2016-08-20 05:30:54.333798885 INFO 2020-07-31 18:06:44,177Z lrauvNc4ToNetcdf.py nudge_coords():686 23: 0.335 0.0041410 0.0020072 1046 7.77 13.26 47.89 2016-08-20 05:38:40.739250898 INFO 2020-07-31 18:06:44,183Z lrauvNc4ToNetcdf.py nudge_coords():686 24: 0.301 0.0049629 0.0018759 1256 9.22 10.45 37.70 2016-08-20 05:47:54.395149946 INFO 2020-07-31 18:06:44,189Z lrauvNc4ToNetcdf.py nudge_coords():686 25: 0.218 0.0051066 0.0024329 1229 10.00 12.51 45.09 2016-08-20 05:57:54.763295889 INFO 2020-07-31 18:06:44,194Z lrauvNc4ToNetcdf.py nudge_coords():686 26: 0.314 0.0034180 0.0015908 713 6.50 12.58 45.34 2016-08-20 06:04:25.155268908 INFO 2020-07-31 18:06:44,199Z lrauvNc4ToNetcdf.py nudge_coords():716 27: - - - 2023 13.73 - - INFO 2020-07-31 18:06:44,200Z lrauvNc4ToNetcdf.py nudge_coords():720 Points in final series = 82384 INFO 2020-07-31 18:06:44,230Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():549 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20160819T183451/20160820T071809/data.csv INFO 2020-07-31 18:06:44,282Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():572 Found 0 position values from the Tracking database INFO 2020-07-31 18:06:44,289Z lrauvNc4ToNetcdf.py processResampleNc4File():1152 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'PAR', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-07-31 18:06:44,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1155 Wrote /mbari/LRAUV/tethys/missionlogs/2016/20160810_20160820/20160819T193439/201608191934_201608200619_2S_scieng.nc INFO 2020-07-31 18:06:44,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1158 Removing /tmp/201608191934_201608200619.nc4 INFO 2020-07-31 18:06:45,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2016/20160830_20160831/20160831T141153/201608311412_201608311415.nc4 file... INFO 2020-07-31 18:06:45,057Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201608311412_201608311415.nc4 INFO 2020-07-31 18:06:46,287Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2016/20160830_20160831/20160831T141153/201608311412_201608311415.nc4 INFO 2020-07-31 18:06:46,350Z lrauvNc4ToNetcdf.py createSeries():240 depth : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,411Z lrauvNc4ToNetcdf.py createSeries():240 time : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,513Z lrauvNc4ToNetcdf.py createSeries():240 depth : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,574Z lrauvNc4ToNetcdf.py createSeries():240 time : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,673Z lrauvNc4ToNetcdf.py createSeries():240 depth : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,741Z lrauvNc4ToNetcdf.py createSeries():240 time : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,841Z lrauvNc4ToNetcdf.py createSeries():240 depth : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,902Z lrauvNc4ToNetcdf.py createSeries():240 time : 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:46,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-31 18:06:46,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:06:46,954Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:06:46,957Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:06:46,960Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:06:46,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:06:46,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:06:46,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:06:46,970Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:06:46,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-31 18:06:46,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_salinity empty so skipping INFO 2020-07-31 18:06:46,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_temperature empty so skipping INFO 2020-07-31 18:06:46,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_salinity empty so skipping INFO 2020-07-31 18:06:46,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-07-31 18:06:46,991Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_temperature empty so skipping INFO 2020-07-31 18:06:46,993Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-07-31 18:06:46,995Z lrauvNc4ToNetcdf.py createSeries():240 downwelling_photosynthetic_photon_flux_in_sea_water: 11 v_t values found before 2016-08-31 14:12:00 and after 2016-08-31 14:15:00 INFO 2020-07-31 18:06:47,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-31 18:06:47,012Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:47,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-31 18:06:47,024Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-31 18:06:47,027Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:06:47,030Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-07-31 18:06:47,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_charge empty so skipping INFO 2020-07-31 18:06:47,044Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_battery_voltage empty so skipping INFO 2020-07-31 18:06:47,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable time_fix empty so skipping INFO 2020-07-31 18:06:47,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude_fix empty so skipping INFO 2020-07-31 18:06:47,053Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude_fix empty so skipping INFO 2020-07-31 18:06:47,055Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_average_current empty so skipping INFO 2020-07-31 18:06:47,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_buoyancy_position empty so skipping INFO 2020-07-31 18:06:47,061Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_elevator_angle empty so skipping INFO 2020-07-31 18:06:47,064Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_mass_position empty so skipping INFO 2020-07-31 18:06:47,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_rudder_angle empty so skipping INFO 2020-07-31 18:06:47,069Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable platform_propeller_rotation_rate empty so skipping INFO 2020-07-31 18:06:47,091Z lrauvNc4ToNetcdf.py createNav():486 Variable platform_pitch_angle empty so skipping INFO 2020-07-31 18:06:47,112Z lrauvNc4ToNetcdf.py createNav():486 Variable platform_roll_angle empty so skipping INFO 2020-07-31 18:06:47,132Z lrauvNc4ToNetcdf.py createNav():486 Variable platform_orientation empty so skipping INFO 2020-07-31 18:06:47,133Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2016/20160830_20160831/20160831T141153/201608311412_201608311415.nc4 INFO 2020-07-31 18:06:47,231Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-07-31 18:06:47,232Z lrauvNc4ToNetcdf.py processResampleNc4File():1148 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-07-31 18:06:47,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1149 Not creating /mbari/LRAUV/tethys/missionlogs/2016/20160830_20160831/20160831T141153/201608311412_201608311415_2S_scieng.nc INFO 2020-07-31 18:06:47,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2016/20161026_20161101/20161030T220804/201610302208_201610302214.nc4 file... INFO 2020-07-31 18:06:47,438Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201610302208_201610302214.nc4 INFO 2020-07-31 18:06:48,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2016/20161026_20161101/20161030T220804/201610302208_201610302214.nc4 INFO 2020-07-31 18:06:48,756Z lrauvNc4ToNetcdf.py createSeries():240 depth : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:48,823Z lrauvNc4ToNetcdf.py createSeries():240 time : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:48,930Z lrauvNc4ToNetcdf.py createSeries():240 depth : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:48,998Z lrauvNc4ToNetcdf.py createSeries():240 time : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,105Z lrauvNc4ToNetcdf.py createSeries():240 depth : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,172Z lrauvNc4ToNetcdf.py createSeries():240 time : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,279Z lrauvNc4ToNetcdf.py createSeries():240 depth : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,346Z lrauvNc4ToNetcdf.py createSeries():240 time : 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,396Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-31 18:06:49,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:06:49,403Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:06:49,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:06:49,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:06:49,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-07-31 18:06:49,414Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude empty so skipping INFO 2020-07-31 18:06:49,416Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude empty so skipping INFO 2020-07-31 18:06:49,419Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable depth empty so skipping INFO 2020-07-31 18:06:49,421Z lrauvNc4ToNetcdf.py createSeries():240 mass_concentration_of_oxygen_in_sea_water: 6 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-31 18:06:49,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_salinity empty so skipping INFO 2020-07-31 18:06:49,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable sea_water_temperature empty so skipping INFO 2020-07-31 18:06:49,435Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_salinity empty so skipping INFO 2020-07-31 18:06:49,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_salinity empty so skipping INFO 2020-07-31 18:06:49,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_mean_sea_water_temperature empty so skipping INFO 2020-07-31 18:06:49,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable bin_median_sea_water_temperature empty so skipping INFO 2020-07-31 18:06:49,444Z lrauvNc4ToNetcdf.py createSeries():240 downwelling_photosynthetic_photon_flux_in_sea_water: 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,460Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-31 18:06:49,462Z lrauvNc4ToNetcdf.py createSeries():240 mass_concentration_of_chlorophyll_in_sea_water: 104 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:49,472Z lrauvNc4ToNetcdf.py createSeries():240 Output470: 104 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-31 18:06:49,481Z lrauvNc4ToNetcdf.py createSeries():240 Output650: 104 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,489Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-31 18:06:49,495Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter bin_mean_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:49,500Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter bin_median_mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-31 18:06:49,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-07-31 18:06:49,528Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-07-31 18:06:49,530Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable time_fix empty so skipping INFO 2020-07-31 18:06:49,533Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable latitude_fix empty so skipping INFO 2020-07-31 18:06:49,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1059 Variable longitude_fix empty so skipping INFO 2020-07-31 18:06:49,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-07-31 18:06:49,548Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-31 18:06:49,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-31 18:06:49,564Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-31 18:06:49,569Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-31 18:06:49,592Z lrauvNc4ToNetcdf.py createSeries():240 platform_pitch_angle: 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,645Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:49,666Z lrauvNc4ToNetcdf.py createSeries():240 platform_roll_angle: 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,719Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:49,741Z lrauvNc4ToNetcdf.py createSeries():240 platform_orientation: 28 v_t values found before 2016-10-30 22:08:00 and after 2016-10-30 22:14:00 INFO 2020-07-31 18:06:49,793Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-31 18:06:49,794Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2016/20161026_20161101/20161030T220804/201610302208_201610302214.nc4 INFO 2020-07-31 18:06:49,895Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment ERROR 2020-07-31 18:06:49,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1148 index 0 is out of bounds for axis 0 with size 0 ERROR 2020-07-31 18:06:49,896Z lrauvNc4ToNetcdf.py processResampleNc4File():1149 Not creating /mbari/LRAUV/tethys/missionlogs/2016/20161026_20161101/20161030T220804/201610302208_201610302214_2S_scieng.nc