INFO 2020-07-30 02:36:33,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Reading /mbari/LRAUV/tethys/missionlogs/2012/20120908_20120920/20120917T025522/201209170255_201209171110.nc4 file... INFO 2020-07-30 02:36:33,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1006 After copying to /tmp/201209170255_201209171110.nc4 INFO 2020-07-30 02:36:33,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Read file /mbari/LRAUV/tethys/missionlogs/2012/20120908_20120920/20120917T025522/201209170255_201209171110.nc4 INFO 2020-07-30 02:36:33,952Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:34,722Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:35,479Z lrauvNc4ToNetcdf.py createSeries():240 depth : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:36,250Z lrauvNc4ToNetcdf.py createSeries():240 time : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:37,025Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:37,774Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:38,524Z lrauvNc4ToNetcdf.py createSeries():240 depth : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:39,285Z lrauvNc4ToNetcdf.py createSeries():240 time : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:40,053Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:40,802Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:41,549Z lrauvNc4ToNetcdf.py createSeries():240 depth : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:42,306Z lrauvNc4ToNetcdf.py createSeries():240 time : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:43,071Z lrauvNc4ToNetcdf.py createSeries():240 latitude : 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:43,819Z lrauvNc4ToNetcdf.py createSeries():240 longitude: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:44,567Z lrauvNc4ToNetcdf.py createSeries():240 depth : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:45,344Z lrauvNc4ToNetcdf.py createSeries():240 time : 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 WARNING 2020-07-30 02:36:46,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from latitude repeated/decreasing values at indices: [4576 5708] WARNING 2020-07-30 02:36:46,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from longitude repeated/decreasing values at indices: [4576] WARNING 2020-07-30 02:36:46,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from depth repeated/decreasing values at indices: [1517 1518 1519 1520 1521 1522 1523 1524 1525 1526 1527 1528 1529 1530 1531 1532 1533 1534 1535 1536 1537 1538 1539 1540 1541 1542 1543 1544 1545 1546 1547 1548 1549 1550 1551 1552 1553 1554 1555 1556 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 1567 1568 1569 1570 1571 1572 1573 1574 1575 1576 1577 1578 1579 1580 1581 1582 1583 1584 1585 1586 1587 1588 1589 1590 1591 1592 1593 1594 1595 1596 1597 1598 1599 1600 1601 1602 1603 1604 1605 1606 1607 1608 1609 1610 1611 1612 1613 1614 1615 1616 1617 1618 1619 1620 1621 1622 1623 1624 1625 1626 1627 1628 1629 1630 1631 1632 1633 1634 1635 1636 1637 1638 1639 1640 6094 7226] WARNING 2020-07-30 02:36:46,132Z lrauvNc4ToNetcdf.py processResampleNc4File():1017 Dropping from time repeated/decreasing values at indices: [1515 1516 1517 1518 1519 1520 1521 1522 1523 1524 1525 1526 1527 1528 1529 1530 1531 1532 1533 1534 1535 1536 1537 1538 1539 1540 1541 1542 1543 1544 1545 1546 1547 1548 1549 1550 1551 1552 1553 1554 1555 1556 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 1567 1568 1569 1570 1571 1572 1573 1574 1575 1576 1577 1578 1579 1580 1581 1582 1583 1584 1585 1586 1587 1588 1589 1590 1591 1592 1593 1594 1595 1596 1597 1598 1599 1600 1601 1602 1603 1604 1605 1606 1607 1608 1609 1610 1611 1612 1613 1614 1615 1616 1617 1618 1619 1620 1621 1622 1623 1624 1625 1626 1627 1628 1629 1630 1631 1632 1633 1634 1635 1636 1637 1638 6092 7224] INFO 2020-07-30 02:36:46,138Z lrauvNc4ToNetcdf.py processResampleNc4File():1021 Creating t variable of the time indexes INFO 2020-07-30 02:36:46,154Z lrauvNc4ToNetcdf.py createSeries():240 platform_buoyancy_position: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:46,238Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2020-07-30 02:36:46,240Z lrauvNc4ToNetcdf.py createSeries():240 platform_elevator_angle: 33 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:46,349Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2020-07-30 02:36:46,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-07-30 02:36:46,434Z lrauvNc4ToNetcdf.py createSeries():240 platform_rudder_angle: 33 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:46,571Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2020-07-30 02:36:46,574Z lrauvNc4ToNetcdf.py createSeries():240 platform_propeller_rotation_rate: 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:47,192Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2020-07-30 02:36:47,197Z lrauvNc4ToNetcdf.py createSeries():240 downwelling_photosynthetic_photon_flux_in_sea_water: 98 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:47,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-07-30 02:36:47,969Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-07-30 02:36:47,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-07-30 02:36:47,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2020-07-30 02:36:47,990Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-07-30 02:36:47,992Z lrauvNc4ToNetcdf.py createSeries():240 mass_concentration_of_oxygen_in_sea_water: 42 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:48,227Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen INFO 2020-07-30 02:36:48,233Z lrauvNc4ToNetcdf.py createSeries():240 sea_water_salinity: 213 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:49,420Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2020-07-30 02:36:49,426Z lrauvNc4ToNetcdf.py createSeries():240 sea_water_temperature: 213 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:50,619Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature INFO 2020-07-30 02:36:50,622Z lrauvNc4ToNetcdf.py createSeries():240 mole_concentration_of_nitrate_in_sea_water: 1 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:50,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group ISUS parameter mole_concentration_of_nitrate_in_sea_water renaming to nitrate INFO 2020-07-30 02:36:50,811Z lrauvNc4ToNetcdf.py createSeries():240 mass_concentration_of_chlorophyll_in_sea_water: 498 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:53,582Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2020-07-30 02:36:53,596Z lrauvNc4ToNetcdf.py createSeries():240 Output470: 498 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:56,365Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470 INFO 2020-07-30 02:36:56,382Z lrauvNc4ToNetcdf.py createSeries():240 Output650: 498 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:59,156Z lrauvNc4ToNetcdf.py processResampleNc4File():1096 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650 INFO 2020-07-30 02:36:59,178Z lrauvNc4ToNetcdf.py createSeries():240 platform_pitch_angle: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:36:59,973Z lrauvNc4ToNetcdf.py createNav():505 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 02:36:59,991Z lrauvNc4ToNetcdf.py createSeries():240 platform_roll_angle: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:37:00,782Z lrauvNc4ToNetcdf.py createNav():505 platform_roll_angle -> roll: {'units': 'n/a', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 02:37:00,801Z lrauvNc4ToNetcdf.py createSeries():240 platform_orientation: 97 v_t values found before 2012-09-17 02:55:00 and after 2012-09-17 11:10:00 INFO 2020-07-30 02:37:01,589Z lrauvNc4ToNetcdf.py createNav():505 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-07-30 02:37:01,590Z lrauvNc4ToNetcdf.py nudge_coords():625 /mbari/LRAUV/tethys/missionlogs/2012/20120908_20120920/20120917T025522/201209170255_201209171110.nc4 INFO 2020-07-30 02:37:03,157Z lrauvNc4ToNetcdf.py nudge_coords():643 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-07-30 02:37:03,159Z lrauvNc4ToNetcdf.py nudge_coords():660 - - - 125 0.92 - - - INFO 2020-07-30 02:37:03,169Z lrauvNc4ToNetcdf.py nudge_coords():686 1: 0.320 -0.0031492 -0.0022257 1785 17.42 8.72 -23.67 2012-09-17 03:22:18.398848057 INFO 2020-07-30 02:37:03,174Z lrauvNc4ToNetcdf.py nudge_coords():686 2: 0.429 -0.0010185 -0.0007492 223 5.75 8.91 -24.14 2012-09-17 03:28:05.100195885 INFO 2020-07-30 02:37:03,179Z lrauvNc4ToNetcdf.py nudge_coords():686 3: 0.270 0.0000000 0.0000000 71 0.50 -0.00 0.00 2012-09-17 03:28:36.013312101 INFO 2020-07-30 02:37:03,184Z lrauvNc4ToNetcdf.py nudge_coords():686 4: 0.386 -0.0012287 -0.0007968 203 6.06 9.01 -24.36 2012-09-17 03:34:40.156575918 INFO 2020-07-30 02:37:03,189Z lrauvNc4ToNetcdf.py nudge_coords():686 5: 0.460 -0.0023518 -0.0014417 888 10.97 9.04 -24.34 2012-09-17 03:45:39.438364029 INFO 2020-07-30 02:37:03,194Z lrauvNc4ToNetcdf.py nudge_coords():686 6: 0.391 -0.0002358 -0.0001557 153 1.08 9.93 -26.73 2012-09-17 03:46:45.800395966 INFO 2020-07-30 02:37:03,199Z lrauvNc4ToNetcdf.py nudge_coords():686 7: 0.354 -0.0012238 -0.0007578 936 6.23 8.39 -22.53 2012-09-17 03:53:01.047204018 INFO 2020-07-30 02:37:03,204Z lrauvNc4ToNetcdf.py nudge_coords():686 8: 0.220 0.0000000 0.0000000 312 2.14 -0.00 0.00 2012-09-17 03:55:10.403072119 INFO 2020-07-30 02:37:03,209Z lrauvNc4ToNetcdf.py nudge_coords():686 9: 0.319 -0.0009585 -0.0006413 727 4.84 9.16 -24.55 2012-09-17 04:00:01.261440039 INFO 2020-07-30 02:37:03,214Z lrauvNc4ToNetcdf.py nudge_coords():686 10: 0.397 -0.0003422 -0.0000718 190 1.34 3.72 -9.96 2012-09-17 04:01:22.163743973 INFO 2020-07-30 02:37:03,219Z lrauvNc4ToNetcdf.py nudge_coords():686 11: 0.378 -0.0000208 -0.0000032 9 0.05 4.19 -11.22 2012-09-17 04:01:26.190783978 INFO 2020-07-30 02:37:03,224Z lrauvNc4ToNetcdf.py nudge_coords():686 12: 0.391 0.0000000 0.0000000 205 1.40 -0.00 0.00 2012-09-17 04:02:51.013312101 INFO 2020-07-30 02:37:03,229Z lrauvNc4ToNetcdf.py nudge_coords():686 13: 0.368 -0.0100756 0.0021376 8575 62.08 -2.54 6.38 2012-09-17 05:04:55.991012096 INFO 2020-07-30 02:37:03,235Z lrauvNc4ToNetcdf.py nudge_coords():686 14: 0.388 -0.0006827 0.0000445 820 6.02 -0.54 1.37 2012-09-17 05:11:03.523547887 INFO 2020-07-30 02:37:03,240Z lrauvNc4ToNetcdf.py nudge_coords():686 15: 0.374 -0.0068204 0.0014655 6988 51.36 -2.15 5.29 2012-09-17 06:02:27.525115966 INFO 2020-07-30 02:37:03,245Z lrauvNc4ToNetcdf.py nudge_coords():686 16: 0.355 -0.0008173 0.0004348 913 6.70 -4.89 12.03 2012-09-17 06:09:14.012032032 INFO 2020-07-30 02:37:03,251Z lrauvNc4ToNetcdf.py nudge_coords():686 17: 0.341 -0.0066417 0.0011582 7509 55.69 -1.62 3.85 2012-09-17 07:04:57.698368073 INFO 2020-07-30 02:37:03,256Z lrauvNc4ToNetcdf.py nudge_coords():686 18: 0.376 -0.0001942 0.0001920 1333 9.71 -1.54 3.66 2012-09-17 07:14:44.859208107 INFO 2020-07-30 02:37:03,262Z lrauvNc4ToNetcdf.py nudge_coords():686 19: 0.359 -0.0021110 -0.0004775 6387 47.18 0.82 -1.88 2012-09-17 08:01:58.023639917 INFO 2020-07-30 02:37:03,267Z lrauvNc4ToNetcdf.py nudge_coords():686 20: 0.337 0.0000000 0.0000000 366 2.70 -0.00 0.00 2012-09-17 08:04:44.046080112 INFO 2020-07-30 02:37:03,272Z lrauvNc4ToNetcdf.py nudge_coords():686 21: 0.358 -0.0020322 -0.0042980 8164 60.18 5.83 -13.23 2012-09-17 09:04:55.396964073 INFO 2020-07-30 02:37:03,278Z lrauvNc4ToNetcdf.py nudge_coords():686 22: 0.371 -0.0007623 -0.0005620 1041 7.48 6.14 -13.93 2012-09-17 09:12:30.611108065 INFO 2020-07-30 02:37:03,283Z lrauvNc4ToNetcdf.py nudge_coords():686 23: 0.357 -0.0032404 -0.0051544 6506 48.72 8.34 -19.60 2012-09-17 10:01:14.534816027 INFO 2020-07-30 02:37:03,289Z lrauvNc4ToNetcdf.py nudge_coords():686 24: 0.384 -0.0006498 -0.0006690 912 6.61 7.99 -18.76 2012-09-17 10:07:56.490780115 INFO 2020-07-30 02:37:03,294Z lrauvNc4ToNetcdf.py nudge_coords():686 25: 0.349 -0.0072757 -0.0062134 7504 56.01 8.89 -20.56 2012-09-17 11:03:58.622663975 INFO 2020-07-30 02:37:03,300Z lrauvNc4ToNetcdf.py nudge_coords():686 26: 0.313 0.0000000 0.0000000 607 4.45 -0.00 0.00 2012-09-17 11:08:31.029695988 INFO 2020-07-30 02:37:03,305Z lrauvNc4ToNetcdf.py nudge_coords():716 27: - - - 278 2.24 - - INFO 2020-07-30 02:37:03,305Z lrauvNc4ToNetcdf.py nudge_coords():720 Points in final series = 63730 INFO 2020-07-30 02:37:03,320Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():549 http://odss.mbari.org/trackingdb/position/tethys_ac/between/20120917T015531/20120917T121056/data.csv INFO 2020-07-30 02:37:03,397Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():572 Found 0 position values from the Tracking database INFO 2020-07-30 02:37:03,402Z lrauvNc4ToNetcdf.py processResampleNc4File():1152 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'PAR', 'fix_time', 'fix_latitude', 'fix_longitude', 'health_platform_average_current', 'oxygen', 'salinity', 'temperature', 'nitrate', 'chlorophyll', 'bbp470', 'bbp650', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2020-07-30 02:37:04,117Z lrauvNc4ToNetcdf.py processResampleNc4File():1155 Wrote /mbari/LRAUV/tethys/missionlogs/2012/20120908_20120920/20120917T025522/201209170255_201209171110_2S_scieng.nc