2013-10-17T22:26:16.812Z,1382048776.812 [Supervisor](DEBUG): Initializing supervisor.
2013-10-17T22:26:16.812Z,1382048776.812 [SyncHandler](DEBUG): Created PCaller Thread at -2EF5900
2013-10-17T22:26:16.812Z,1382048776.812 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2013-10-17T22:26:16.812Z,1382048776.812 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at -2F56900
2013-10-17T22:26:16.812Z,1382048776.812 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2013-10-17T22:26:16.812Z,1382048776.812 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2013-10-17T22:26:16.812Z,1382048776.812 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at -2FB7900
2013-10-17T22:26:16.812Z,1382048776.812 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2013-10-17T22:26:16.812Z,1382048776.812 [logger ThreadHandler](DEBUG): Created PCaller Thread at -3018900
2013-10-17T22:26:16.812Z,1382048776.812 [Supervisor](INFO): Looking for Config files in directory: Config/
2013-10-17T22:26:16.812Z,1382048776.812 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2013-10-17T22:26:16.821Z,1382048776.821 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2013-10-17T22:26:16.821Z,1382048776.821 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2013-10-17T22:26:16.830Z,1382048776.830 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2013-10-17T22:26:16.830Z,1382048776.830 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2013-10-17T22:26:16.838Z,1382048776.838 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2013-10-17T22:26:16.838Z,1382048776.838 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2013-10-17T22:26:16.844Z,1382048776.844 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2013-10-17T22:26:16.852Z,1382048776.852 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2013-10-17T22:26:16.852Z,1382048776.852 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2013-10-17T22:26:16.860Z,1382048776.860 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2013-10-17T22:26:16.860Z,1382048776.860 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2013-10-17T22:26:16.866Z,1382048776.866 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2013-10-17T22:26:16.866Z,1382048776.866 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2013-10-17T22:26:16.873Z,1382048776.873 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2013-10-17T22:26:16.873Z,1382048776.873 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2013-10-17T22:26:16.880Z,1382048776.880 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2013-10-17T22:26:16.880Z,1382048776.880 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2013-10-17T22:26:16.886Z,1382048776.886 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2013-10-17T22:26:16.886Z,1382048776.886 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2013-10-17T22:26:16.894Z,1382048776.894 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2013-10-17T22:26:16.894Z,1382048776.894 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2013-10-17T22:26:16.900Z,1382048776.900 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2013-10-17T22:26:16.900Z,1382048776.900 [Supervisor](INFO): Looking for Config files in directory: Config/tethyssim/
2013-10-17T22:26:16.900Z,1382048776.900 [Supervisor](INFO): Looking for Config files in directory: Config/tethyssim/tethysadmin/
2013-10-17T22:26:16.900Z,1382048776.900 [Supervisor](INFO): Looking for Config files in directory: Config/sim/
2013-10-17T22:26:16.900Z,1382048776.900 [Supervisor](INFO): Opening Config file at: Config/sim/Science.cfg
2013-10-17T22:26:16.911Z,1382048776.911 [Supervisor](INFO): Opening Config file at: Config/sim/Simulator.cfg
2013-10-17T22:26:16.924Z,1382048776.924 [Supervisor](INFO): Opening Config file at: Config/sim/vehicle.cfg
2013-10-17T22:26:16.931Z,1382048776.931 [Supervisor](INFO): Opening Config file at: Config/sim/Servo.cfg
2013-10-17T22:26:16.937Z,1382048776.937 [Supervisor](INFO): Opening Config file at: Config/sim/Sensor.cfg
2013-10-17T22:26:16.944Z,1382048776.944 [Supervisor](INFO): Opening Config file at: Config/sim/Derivation.cfg
2013-10-17T22:26:16.950Z,1382048776.950 [Supervisor](INFO): Looking for Config files in directory: Config/sim/tethysadmin/
2013-10-17T22:26:16.950Z,1382048776.950 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2013-10-17T22:26:16.950Z,1382048776.950 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2013-10-17T22:26:16.951Z,1382048776.951 [VerticalControl](DEBUG): Construct VerticalControl.
2013-10-17T22:26:16.952Z,1382048776.952 [VerticalControl] Loaded
2013-10-17T22:26:16.952Z,1382048776.952 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2013-10-17T22:26:16.952Z,1382048776.952 [HorizontalControl](DEBUG): Construct HorizontalControl.
2013-10-17T22:26:16.953Z,1382048776.953 [HorizontalControl] Loaded
2013-10-17T22:26:16.953Z,1382048776.953 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2013-10-17T22:26:16.953Z,1382048776.953 [SpeedControl](DEBUG): Construct SpeedControl.
2013-10-17T22:26:16.953Z,1382048776.953 [SpeedControl] Loaded
2013-10-17T22:26:16.953Z,1382048776.953 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2013-10-17T22:26:16.953Z,1382048776.953 [LoopControl](DEBUG): Construct LoopControl.
2013-10-17T22:26:16.953Z,1382048776.953 [LoopControl] Loaded
2013-10-17T22:26:16.953Z,1382048776.953 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2013-10-17T22:26:16.953Z,1382048776.953 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2013-10-17T22:26:16.953Z,1382048776.953 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2013-10-17T22:26:16.953Z,1382048776.953 [AsyncPiEstimator](DEBUG): Construct AsyncPiEstimator.
2013-10-17T22:26:16.953Z,1382048776.953 [AsyncPiEstimator] Loaded
2013-10-17T22:26:16.953Z,1382048776.953 [ComponentRegistry](DEBUG): Component "AsyncPiEstimator" handled in its own thread.
2013-10-17T22:26:16.953Z,1382048776.953 [AsyncPiEstimator ThreadHandler](DEBUG): Created PCaller Thread at -36B9900
2013-10-17T22:26:16.953Z,1382048776.953 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2013-10-17T22:26:16.953Z,1382048776.953 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2013-10-17T22:26:17.006Z,1382048777.006 [CTD_NeilBrown] Loaded
2013-10-17T22:26:17.006Z,1382048777.006 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2013-10-17T22:26:17.006Z,1382048777.006 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at -3940900
2013-10-17T22:26:17.007Z,1382048777.007 [ISUS] Loaded
2013-10-17T22:26:17.007Z,1382048777.007 [ComponentRegistry](DEBUG): SyncComponent "ISUS" handled in the control thread.
2013-10-17T22:26:17.007Z,1382048777.007 [PAR_Licor] Loaded
2013-10-17T22:26:17.007Z,1382048777.007 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2013-10-17T22:26:17.007Z,1382048777.007 [WetLabsBB2FL] Loaded
2013-10-17T22:26:17.007Z,1382048777.007 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2013-10-17T22:26:17.007Z,1382048777.007 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at -39A1900
2013-10-17T22:26:17.007Z,1382048777.007 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2013-10-17T22:26:17.007Z,1382048777.007 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2013-10-17T22:26:17.009Z,1382048777.009 [ExternalSim] Loaded
2013-10-17T22:26:17.009Z,1382048777.009 [ComponentRegistry](DEBUG): SyncComponent "ExternalSim" handled in the control thread.
2013-10-17T22:26:17.010Z,1382048777.010 [InternalSim] Loaded
2013-10-17T22:26:17.010Z,1382048777.010 [ComponentRegistry](DEBUG): SyncComponent "InternalSim" handled in the control thread.
2013-10-17T22:26:17.010Z,1382048777.010 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2013-10-17T22:26:17.010Z,1382048777.010 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2013-10-17T22:26:17.010Z,1382048777.010 [DepthRateCalculator] Loaded
2013-10-17T22:26:17.010Z,1382048777.010 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [HFRadarModelCalc] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "HFRadarModelCalc" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [NavChart] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [PitchRateCalculator] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [SpeedCalculator] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [TempGradientCalculator] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2013-10-17T22:26:17.023Z,1382048777.023 [YawRateCalculator] Loaded
2013-10-17T22:26:17.023Z,1382048777.023 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2013-10-17T22:26:17.024Z,1382048777.024 [Navigation] Loaded
2013-10-17T22:26:17.024Z,1382048777.024 [ComponentRegistry](DEBUG): SyncComponent "Navigation" handled in the control thread.
2013-10-17T22:26:17.024Z,1382048777.024 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2013-10-17T22:26:17.024Z,1382048777.024 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2013-10-17T22:26:17.024Z,1382048777.024 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2013-10-17T22:26:17.024Z,1382048777.024 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2013-10-17T22:26:17.025Z,1382048777.025 [AHRS_sp3003D] Loaded
2013-10-17T22:26:17.025Z,1382048777.025 [ComponentRegistry](DEBUG): SyncComponent "AHRS_sp3003D" handled in the control thread.
2013-10-17T22:26:17.025Z,1382048777.025 [Depth_Keller] Loaded
2013-10-17T22:26:17.025Z,1382048777.025 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2013-10-17T22:26:17.025Z,1382048777.025 [DropWeight] Loaded
2013-10-17T22:26:17.025Z,1382048777.025 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2013-10-17T22:26:17.027Z,1382048777.027 [DVL_micro] Loaded
2013-10-17T22:26:17.027Z,1382048777.027 [ComponentRegistry](DEBUG): Component "DVL_micro" handled in its own thread.
2013-10-17T22:26:17.027Z,1382048777.027 [DVL_micro ThreadHandler](DEBUG): Created PCaller Thread at -43AD900
2013-10-17T22:26:17.028Z,1382048777.028 [NAL9602] Loaded
2013-10-17T22:26:17.028Z,1382048777.028 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2013-10-17T22:26:17.029Z,1382048777.029 [Onboard] Loaded
2013-10-17T22:26:17.029Z,1382048777.029 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2013-10-17T22:26:17.029Z,1382048777.029 [Radio_Freewave] Loaded
2013-10-17T22:26:17.029Z,1382048777.029 [ComponentRegistry](DEBUG): SyncComponent "Radio_Freewave" handled in the control thread.
2013-10-17T22:26:17.030Z,1382048777.030 [DAT] Loaded
2013-10-17T22:26:17.030Z,1382048777.030 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2013-10-17T22:26:17.030Z,1382048777.030 [SCPI] Loaded
2013-10-17T22:26:17.030Z,1382048777.030 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2013-10-17T22:26:17.030Z,1382048777.030 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2013-10-17T22:26:17.030Z,1382048777.030 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2013-10-17T22:26:17.031Z,1382048777.031 [SBIT](DEBUG): Construct Startup Built In Test.
2013-10-17T22:26:17.031Z,1382048777.031 [SBIT] Loaded
2013-10-17T22:26:17.031Z,1382048777.031 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2013-10-17T22:26:17.031Z,1382048777.031 [IBIT](DEBUG): Construct Initiated Built In Test.
2013-10-17T22:26:17.031Z,1382048777.031 [IBIT] Loaded
2013-10-17T22:26:17.031Z,1382048777.031 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2013-10-17T22:26:17.031Z,1382048777.031 [CBIT](DEBUG): Construct CBIT Built In Test.
2013-10-17T22:26:17.033Z,1382048777.033 [CBIT] Loaded
2013-10-17T22:26:17.033Z,1382048777.033 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2013-10-17T22:26:17.033Z,1382048777.033 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2013-10-17T22:26:17.033Z,1382048777.033 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2013-10-17T22:26:17.034Z,1382048777.034 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2013-10-17T22:26:17.034Z,1382048777.034 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2013-10-17T22:26:17.035Z,1382048777.035 [BuoyancyServo] Loaded
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [ElevatorServo] Loaded
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [MassServo] Loaded
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [RudderServo] Loaded
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [ThrusterServo] Loaded
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2013-10-17T22:26:17.035Z,1382048777.035 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2013-10-17T22:26:17.035Z,1382048777.035 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at -4AB5900
2013-10-17T22:26:17.037Z,1382048777.037 [Supervisor](DEBUG): Running supervisor.
2013-10-17T22:26:17.037Z,1382048777.037 [logger](INFO): Thread ID is 22131
2013-10-17T22:26:17.037Z,1382048777.037 [AsyncPiEstimator](INFO): Thread ID is 22186
2013-10-17T22:26:17.037Z,1382048777.037 [AsyncPiEstimator](DEBUG): Initialize AsyncPiEstimator.
2013-10-17T22:26:17.038Z,1382048777.038 [CTD_NeilBrown](INFO): Thread ID is 22187
2013-10-17T22:26:17.038Z,1382048777.038 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2013-10-17T22:26:17.038Z,1382048777.038 [WetLabsBB2FL](INFO): Thread ID is 22188
2013-10-17T22:26:17.038Z,1382048777.038 [DVL_micro](INFO): Thread ID is 22189
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Thread ID is 22190
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Looking for Electronic Nav Chart files in directory: Resources
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2013-10-17T22:26:17.038Z,1382048777.038 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2013-10-17T22:26:17.046Z,1382048777.046 [CommandLine](INFO): Thread ID is 22130
2013-10-17T22:26:17.046Z,1382048777.046 [controlThread](INFO): Thread ID is 22129
2013-10-17T22:26:17.046Z,1382048777.046 [controlThread](DEBUG): Initializing ControlThread
2013-10-17T22:26:17.046Z,1382048777.046 [CycleStarter](INFO): Thread ID is 22128
2013-10-17T22:26:17.046Z,1382048777.046 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2013-10-17T22:26:17.046Z,1382048777.046 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2013-10-17T22:26:17.046Z,1382048777.046 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2013-10-17T22:26:17.046Z,1382048777.046 [LoopControl](DEBUG): Initialize LoopControlComponent.
2013-10-17T22:26:17.046Z,1382048777.046 [ExternalSim](INFO): ExternalSim initializing...
2013-10-17T22:26:17.047Z,1382048777.047 [ExternalSim](DEBUG): beaconLat = 36.81340
2013-10-17T22:26:17.047Z,1382048777.047 [ExternalSim](DEBUG): beaconLon = -121.82240
2013-10-17T22:26:17.047Z,1382048777.047 [ExternalSim](DEBUG): beaconDepth = 25.00
2013-10-17T22:26:17.047Z,1382048777.047 [DVL_micro](INFO): pause:Powering down
2013-10-17T22:26:17.047Z,1382048777.047 [ExternalSim](DEBUG): Simulator initialized
2013-10-17T22:26:17.047Z,1382048777.047 [InternalSim](DEBUG):  InternalSim initializing...
2013-10-17T22:26:17.048Z,1382048777.048 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2013-10-17T22:26:17.048Z,1382048777.048 [NavChart](DEBUG): Initialize NavChart Derivation.
2013-10-17T22:26:17.048Z,1382048777.048 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2013-10-17T22:26:17.048Z,1382048777.048 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2013-10-17T22:26:17.048Z,1382048777.048 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2013-10-17T22:26:17.048Z,1382048777.048 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2013-10-17T22:26:17.048Z,1382048777.048 [Navigation](DEBUG): Initializing Navigation.
2013-10-17T22:26:17.048Z,1382048777.048 [SBIT](INFO): Initialize SBIT Component.
2013-10-17T22:26:17.048Z,1382048777.048 [SBIT](IMPORTANT): Tethys CM Info: 
$Rev:10503
2013-10-17T22:26:17.048Z,1382048777.048 [SBIT](FAULT): Kernel Reporting Different Release From Configuration. Expected:2.6.32-45-generic-pae
Kernel Reported:2.6.32-358.18.1.el6.x86_64
2013-10-17T22:26:17.048Z,1382048777.048 [SBIT](FAULT): Kernel Reporting Different Version From Configuration.
Expected:#102-Ubuntu SMP Wed Jan 2 22:10:16 UTC 2013
Kernel Reported:#1 SMP Wed Aug 28 17:19:38 UTC 2013
2013-10-17T22:26:17.048Z,1382048777.048 [IBIT](INFO): Initialize IBIT Component.
2013-10-17T22:26:17.048Z,1382048777.048 [CBIT](DEBUG): Initialize CBIT Component.
2013-10-17T22:26:17.048Z,1382048777.048 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2013-10-17T22:26:17.048Z,1382048777.048 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2013-10-17T22:26:17.048Z,1382048777.048 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2013-10-17T22:26:17.049Z,1382048777.049 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://aosn.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://aosn.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://aosn.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface RunIn="Progression"/>

    <Aggregate Id="StartupSatComms" >

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2013-10-17T22:26:17.049Z,1382048777.049 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2013-10-17T22:26:17.050Z,1382048777.050 [Default:A.Execute](DEBUG): Construct Execute.
2013-10-17T22:26:17.050Z,1382048777.050 [MissionManager](DEBUG): 
<Mission Id='Default'><Guidance:Execute RunIn='Sequence'><Setting><Guidance:Execute.command/><String>quit</String></Setting></Guidance:Execute></Mission>


2013-10-17T22:26:17.050Z,1382048777.050 [controlThread](DEBUG): Component order: CycleStarter,ExternalSim,InternalSim,ISUS,PAR_Licor,AHRS_sp3003D,Depth_Keller,DropWeight,NAL9602,Onboard,Radio_Freewave,DAT,SCPI,PAR_Licor,Depth_Keller,DepthRateCalculator,HFRadarModelCalc,NavChart,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,Navigation,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,
2013-10-17T22:26:17.052Z,1382048777.052 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2013-10-17T22:26:17.052Z,1382048777.052 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2013-10-17T22:26:17.052Z,1382048777.052 [MassServo](DEBUG): Initializing MassServo.
2013-10-17T22:26:17.052Z,1382048777.052 [RudderServo](DEBUG): Initializing RudderServo.
2013-10-17T22:26:17.052Z,1382048777.052 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2013-10-17T22:26:17.096Z,1382048777.096 [CommandLine](IMPORTANT): got command load ./Missions/Transport/keepstation_3km.xml
2013-10-17T22:26:17.096Z,1382048777.096 [MissionManager](INFO): Loading Mission: ./Missions/Transport/keepstation_3km.xml
2013-10-17T22:26:17.099Z,1382048777.099 [MissionManager](INFO): Inserting Stack: Missions/Transport/keepstation.xml
2013-10-17T22:26:17.099Z,1382048777.099 [MissionManager](ERROR): Cannot load Xml file Missions/Transport/keepstation.xml due to: Failed to open file
2013-10-17T22:26:17.099Z,1382048777.099 [MissionManager](CRITICAL): Could not load mission Missions/Transport/keepstation.xml
2013-10-17T22:26:17.099Z,1382048777.099 [MissionManager](CRITICAL): Only Aggregates can contain elements called RedefineArg
2013-10-17T22:26:17.099Z,1382048777.099 [MissionManager](CRITICAL): Only Aggregates can contain elements called RedefineArg
2013-10-17T22:26:17.099Z,1382048777.099 [keepstation_3km](CRITICAL): Error!!!! no component for child behavior.
2013-10-17T22:26:17.100Z,1382048777.100 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="utf-8"?>
<Mission xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="Tethys http://aosn.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://aosn.mbari.org/tethys/Xml/Units.xsd"
         Id="keepstation_3km">

    <Description>
        Vehicle transits to 3km waypoint and stays within the specified radius.
    </Description>

    <Insert Filename="Transport/keepstation.xml">
        <RedefineArg Name="Latitude"><Units:degree /><Value>36.806966</Value></RedefineArg>
        <RedefineArg Name="Longitude"><Units:degree /><Value>-121.824326</Value></RedefineArg>
    </Insert>

</Mission>


2013-10-17T22:26:17.100Z,1382048777.100 [CommandLine](IMPORTANT): Loaded ./Missions/Transport/keepstation_3km.xml
2013-10-17T22:26:17.146Z,1382048777.146 [CommandLine](IMPORTANT): got command run quitatend
2013-10-17T22:26:17.148Z,1382048777.148 [CommandLine](IMPORTANT): Running 
2013-10-17T22:26:17.446Z,1382048777.446 [CTD_NeilBrown](ERROR): Salinity reading out of range: 33.438362 psu
2013-10-17T22:26:17.446Z,1382048777.446 [CTD_NeilBrown](ERROR): Pressure reading out of range: 0.000000 decibar
2013-10-17T22:26:26.651Z,1382048786.651 [NAL9602](IMPORTANT): GPS fix at: 1382048786.65
2013-10-17T22:26:32.651Z,1382048792.651 [NAL9602](INFO): Powering down
2013-10-17T22:26:32.651Z,1382048792.651 [SBIT](IMPORTANT): Beginning Startup BIT
2013-10-17T22:27:26.651Z,1382048846.651 [SBIT](IMPORTANT): SBIT PASSED
2013-10-17T22:27:27.051Z,1382048847.051 [MissionManager](IMPORTANT): Started mission Startup
2013-10-17T22:27:27.051Z,1382048847.051 [Startup] Running Loop=1
2013-10-17T22:27:27.051Z,1382048847.051 [Startup](INFO): Aggregate::initialize Startup
2013-10-17T22:27:27.051Z,1382048847.051 [Startup:A.GoToSurface] Running Loop=1
2013-10-17T22:27:27.051Z,1382048847.051 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2013-10-17T22:27:27.051Z,1382048847.051 [Startup:StartupSatComms] Running Loop=1
2013-10-17T22:27:27.051Z,1382048847.051 [Startup:StartupSatComms](INFO): Aggregate::initialize Startup:StartupSatComms
2013-10-17T22:27:27.051Z,1382048847.051 [Startup:StartupSatComms:A] Running Loop=1
2013-10-17T22:27:27.451Z,1382048847.451 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2013-10-17T22:27:27.850Z,1382048847.850 [NAL9602](INFO): Powering up
2013-10-17T22:27:33.051Z,1382048853.051 [NAL9602](IMPORTANT): GPS fix at: 1382048853.00
2013-10-17T22:27:33.051Z,1382048853.051 [Startup:StartupSatComms:A] Stopped
2013-10-17T22:27:33.051Z,1382048853.051 [Startup:StartupSatComms:B] Running Loop=1
2013-10-17T22:27:33.452Z,1382048853.452 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2013-10-17T22:27:35.850Z,1382048855.850 [NAL9602](INFO): Sent 332 bytes from file Logs/20131017T222616/Courier0000.lzma
2013-10-17T22:27:35.850Z,1382048855.850 [NAL9602](INFO): Packets left to send: 1
2013-10-17T22:27:35.853Z,1382048855.853 [NAL9602](INFO): Stored copy of sent data in Logs/20131017T222616/Courier0000.lzma.parts/0001.sbd
2013-10-17T22:27:37.050Z,1382048857.050 [NAL9602](INFO): Sent 48 bytes from file Logs/20131017T222616/Courier0000.lzma
2013-10-17T22:27:37.050Z,1382048857.050 [NAL9602](INFO): Packets left to send: 0
2013-10-17T22:27:37.052Z,1382048857.052 [NAL9602](INFO): Stored copy of sent data in Logs/20131017T222616/Courier0000.lzma.parts/0000.sbd
2013-10-17T22:27:38.250Z,1382048858.250 [NAL9602](INFO): Sent 332 bytes from file Logs/20131017T222616/Express0001.lzma
2013-10-17T22:27:38.250Z,1382048858.250 [NAL9602](INFO): Packets left to send: 2
2013-10-17T22:27:38.253Z,1382048858.253 [NAL9602](INFO): Stored copy of sent data in Logs/20131017T222616/Express0001.lzma.parts/0002.sbd
2013-10-17T22:27:39.450Z,1382048859.450 [NAL9602](INFO): Sent 332 bytes from file Logs/20131017T222616/Express0001.lzma
2013-10-17T22:27:39.450Z,1382048859.450 [NAL9602](INFO): Packets left to send: 1
2013-10-17T22:27:39.452Z,1382048859.452 [NAL9602](INFO): Stored copy of sent data in Logs/20131017T222616/Express0001.lzma.parts/0001.sbd
2013-10-17T22:27:40.650Z,1382048860.650 [NAL9602](INFO): Sent 54 bytes from file Logs/20131017T222616/Express0001.lzma
2013-10-17T22:27:40.650Z,1382048860.650 [NAL9602](INFO): Packets left to send: 0
2013-10-17T22:27:40.652Z,1382048860.652 [NAL9602](INFO): Stored copy of sent data in Logs/20131017T222616/Express0001.lzma.parts/0000.sbd
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:StartupSatComms:B] Stopped
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:StartupSatComms] Stopped
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:StartupSatComms](INFO): Aggregate::uninitialize Startup:StartupSatComms
2013-10-17T22:27:41.451Z,1382048861.451 [Startup](INFO): Completed Startup
2013-10-17T22:27:41.451Z,1382048861.451 [Startup] Stopped
2013-10-17T22:27:41.451Z,1382048861.451 [Startup](INFO): Aggregate::uninitialize Startup
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:A.GoToSurface] Stopped
2013-10-17T22:27:41.451Z,1382048861.451 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2013-10-17T22:27:41.850Z,1382048861.850 [MissionManager](IMPORTANT): Started mission keepstation_3km
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km] Running Loop=1
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km](INFO): Aggregate::initialize keepstation_3km
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km] Running Loop=1
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km](INFO): Aggregate::initialize keepstation_3km
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km](INFO): Completed keepstation_3km
2013-10-17T22:27:41.850Z,1382048861.850 [keepstation_3km] Stopped
2013-10-17T22:27:41.850Z,1382048861.851 [keepstation_3km](INFO): Aggregate::uninitialize keepstation_3km
2013-10-17T22:27:41.869Z,1382048861.869 [CommandLine](IMPORTANT): got command quit
2013-10-17T22:27:42.251Z,1382048862.251 [MissionManager](IMPORTANT): Started mission Default
2013-10-17T22:27:42.251Z,1382048862.251 [Default] Running Loop=1
2013-10-17T22:27:42.251Z,1382048862.251 [Default](INFO): Aggregate::initialize Default
2013-10-17T22:27:42.251Z,1382048862.251 [Default:A.Execute] Running Loop=1
2013-10-17T22:27:42.251Z,1382048862.251 [Default:A.Execute](INFO): Executing command quit
2013-10-17T22:27:42.251Z,1382048862.251 [Default:A.Execute] Stopped
2013-10-17T22:27:42.251Z,1382048862.251 [Default](INFO): Completed Default
2013-10-17T22:27:42.251Z,1382048862.251 [Default] Stopped
2013-10-17T22:27:42.251Z,1382048862.251 [Default](INFO): Aggregate::uninitialize Default
2013-10-17T22:27:42.651Z,1382048862.651 [MissionManager](IMPORTANT): Started mission Default
2013-10-17T22:27:42.651Z,1382048862.651 [Default] Running Loop=1
2013-10-17T22:27:42.651Z,1382048862.651 [Default](INFO): Aggregate::initialize Default
2013-10-17T22:27:42.651Z,1382048862.651 [Default:A.Execute] Running Loop=1
2013-10-17T22:27:42.651Z,1382048862.651 [Default:A.Execute](INFO): Executing command quit
2013-10-17T22:27:42.651Z,1382048862.651 [Default:A.Execute] Stopped
2013-10-17T22:27:42.651Z,1382048862.651 [Default](INFO): Completed Default
2013-10-17T22:27:42.651Z,1382048862.651 [Default] Stopped
2013-10-17T22:27:42.651Z,1382048862.651 [Default](INFO): Aggregate::uninitialize Default
2013-10-17T22:27:43.023Z,1382048863.023 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2013-10-17T22:27:43.023Z,1382048863.023 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2013-10-17T22:27:43.051Z,1382048863.051 [MissionManager](IMPORTANT): Started mission Default
2013-10-17T22:27:43.051Z,1382048863.051 [Default] Running Loop=1
2013-10-17T22:27:43.051Z,1382048863.051 [Default](INFO): Aggregate::initialize Default
2013-10-17T22:27:43.051Z,1382048863.051 [Default:A.Execute] Running Loop=1
2013-10-17T22:27:43.051Z,1382048863.051 [Default:A.Execute](INFO): Executing command quit
2013-10-17T22:27:43.051Z,1382048863.051 [Default:A.Execute] Stopped
2013-10-17T22:27:43.051Z,1382048863.051 [Default](INFO): Completed Default
2013-10-17T22:27:43.051Z,1382048863.051 [Default] Stopped
2013-10-17T22:27:43.051Z,1382048863.051 [Default](INFO): Aggregate::uninitialize Default
2013-10-17T22:27:43.344Z,1382048863.344 [ComponentRegistry](INFO): Shutting down DVL_micro ThreadHandler
2013-10-17T22:27:43.451Z,1382048863.451 [MissionManager](IMPORTANT): Started mission Default
2013-10-17T22:27:43.451Z,1382048863.451 [Default] Running Loop=1
2013-10-17T22:27:43.451Z,1382048863.451 [Default](INFO): Aggregate::initialize Default
2013-10-17T22:27:43.451Z,1382048863.451 [Default:A.Execute] Running Loop=1
2013-10-17T22:27:43.451Z,1382048863.451 [Default:A.Execute](INFO): Executing command quit
2013-10-17T22:27:43.451Z,1382048863.451 [Default:A.Execute] Stopped
2013-10-17T22:27:43.451Z,1382048863.451 [Default](INFO): Completed Default
2013-10-17T22:27:43.451Z,1382048863.451 [Default] Stopped
2013-10-17T22:27:43.451Z,1382048863.451 [Default](INFO): Aggregate::uninitialize Default
2013-10-17T22:27:43.568Z,1382048863.568 [DVL_micro](INFO): uninitialize:Powering down
2013-10-17T22:27:43.585Z,1382048863.585 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2013-10-17T22:27:43.605Z,1382048863.605 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2013-10-17T22:27:43.851Z,1382048863.851 [MissionManager](IMPORTANT): Started mission Default
2013-10-17T22:27:43.851Z,1382048863.851 [Default] Running Loop=1
2013-10-17T22:27:43.851Z,1382048863.851 [Default](INFO): Aggregate::initialize Default
2013-10-17T22:27:43.851Z,1382048863.851 [Default:A.Execute] Running Loop=1
2013-10-17T22:27:43.851Z,1382048863.851 [Default:A.Execute](INFO): Executing command quit
2013-10-17T22:27:43.851Z,1382048863.851 [Default:A.Execute] Stopped
2013-10-17T22:27:43.851Z,1382048863.851 [Default](INFO): Completed Default
2013-10-17T22:27:43.851Z,1382048863.851 [Default] Stopped
2013-10-17T22:27:43.851Z,1382048863.851 [Default](INFO): Aggregate::uninitialize Default
2013-10-17T22:27:43.987Z,1382048863.987 [ComponentRegistry](INFO): Shutting down AsyncPiEstimator ThreadHandler
2013-10-17T22:27:44.158Z,1382048864.158 [AsyncPiEstimator](DEBUG): Uninitialize AsyncPiEstimator.
2013-10-17T22:27:44.167Z,1382048864.167 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2013-10-17T22:27:44.188Z,1382048864.188 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2013-10-17T22:27:44.208Z,1382048864.208 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2013-10-17T22:27:44.250Z,1382048864.250 [controlThread](DEBUG): Uninitializing ControlThread
2013-10-17T22:27:44.250Z,1382048864.250 [NAL9602](INFO): Powering down
2013-10-17T22:27:44.250Z,1382048864.250 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2013-10-17T22:27:44.250Z,1382048864.250 [NavChart](DEBUG): Uninitialize NavChart Derivation.
2013-10-17T22:27:44.250Z,1382048864.250 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2013-10-17T22:27:44.250Z,1382048864.250 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2013-10-17T22:27:44.250Z,1382048864.250 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2013-10-17T22:27:44.250Z,1382048864.250 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2013-10-17T22:27:44.250Z,1382048864.250 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2013-10-17T22:27:44.261Z,1382048864.261 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2013-10-17T22:27:44.261Z,1382048864.261 [MassServo](DEBUG): Uninitialize Mass Servo.
2013-10-17T22:27:44.261Z,1382048864.261 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2013-10-17T22:27:44.261Z,1382048864.261 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2013-10-17T22:27:44.261Z,1382048864.261 [SBIT](DEBUG): Uninitialize SBIT Component.
2013-10-17T22:27:44.261Z,1382048864.261 [IBIT](DEBUG): Uninitialize IBIT Component.
2013-10-17T22:27:44.261Z,1382048864.261 [CBIT](DEBUG): Uninitialize CBIT Component.