2020-05-22T18:42:12.883Z,1590172932.883 [Supervisor](DEBUG): Initializing supervisor.
2020-05-22T18:42:12.886Z,1590172932.886 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2020-05-22T18:42:12.886Z,1590172932.886 [SyncHandler](INFO): Protected caller Thread ID is 806
2020-05-22T18:42:12.887Z,1590172932.887 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2020-05-22T18:42:12.888Z,1590172932.888 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2020-05-22T18:42:12.888Z,1590172932.888 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 807
2020-05-22T18:42:12.892Z,1590172932.892 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2020-05-22T18:42:12.908Z,1590172932.908 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2020-05-22T18:42:12.909Z,1590172932.909 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2020-05-22T18:42:12.910Z,1590172932.910 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 808
2020-05-22T18:42:12.911Z,1590172932.911 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2020-05-22T18:42:12.912Z,1590172932.912 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2020-05-22T18:42:12.912Z,1590172932.912 [logger ThreadHandler](INFO): Protected caller Thread ID is 809
2020-05-22T18:42:12.915Z,1590172932.915 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2020-05-22T18:42:12.915Z,1590172932.915 [Supervisor](INFO): Looking for Config files in directory: Config/
2020-05-22T18:42:12.919Z,1590172932.919 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2020-05-22T18:42:13.019Z,1590172933.019 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2020-05-22T18:42:13.021Z,1590172933.021 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2020-05-22T18:42:13.758Z,1590172933.758 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2020-05-22T18:42:13.760Z,1590172933.760 [Supervisor](INFO): Opening Config file at: Config/Dock.cfg
2020-05-22T18:42:13.982Z,1590172933.982 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Dock
2020-05-22T18:42:13.983Z,1590172933.983 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2020-05-22T18:42:14.088Z,1590172934.088 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2020-05-22T18:42:14.089Z,1590172934.089 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2020-05-22T18:42:14.198Z,1590172934.198 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2020-05-22T18:42:14.200Z,1590172934.200 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2020-05-22T18:42:14.282Z,1590172934.282 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2020-05-22T18:42:14.438Z,1590172934.438 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2020-05-22T18:42:14.440Z,1590172934.440 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2020-05-22T18:42:14.790Z,1590172934.790 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2020-05-22T18:42:14.792Z,1590172934.792 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2020-05-22T18:42:15.387Z,1590172935.387 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2020-05-22T18:42:15.389Z,1590172935.389 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2020-05-22T18:42:15.554Z,1590172935.554 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2020-05-22T18:42:15.555Z,1590172935.555 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2020-05-22T18:42:15.760Z,1590172935.760 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2020-05-22T18:42:15.762Z,1590172935.762 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2020-05-22T18:42:16.619Z,1590172936.619 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2020-05-22T18:42:16.620Z,1590172936.620 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2020-05-22T18:42:17.343Z,1590172937.343 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2020-05-22T18:42:17.345Z,1590172937.345 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2020-05-22T18:42:17.591Z,1590172937.591 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2020-05-22T18:42:17.593Z,1590172937.593 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2020-05-22T18:42:18.129Z,1590172938.129 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2020-05-22T18:42:18.130Z,1590172938.130 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2020-05-22T18:42:18.522Z,1590172938.522 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2020-05-22T18:42:18.524Z,1590172938.524 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-pontus/
2020-05-22T18:42:18.527Z,1590172938.527 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/secure.cfg
2020-05-22T18:42:18.613Z,1590172938.613 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Sensor.cfg
2020-05-22T18:42:18.789Z,1590172938.789 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Servo.cfg
2020-05-22T18:42:18.904Z,1590172938.904 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Simulator.cfg
2020-05-22T18:42:18.990Z,1590172938.990 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/logger.cfg
2020-05-22T18:42:19.087Z,1590172939.087 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/vehicle.cfg
2020-05-22T18:42:19.321Z,1590172939.321 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Battery.cfg
2020-05-22T18:42:19.631Z,1590172939.631 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2020-05-22T18:42:19.632Z,1590172939.632 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Navigation.cfg
2020-05-22T18:42:19.728Z,1590172939.728 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/BIT.cfg
2020-05-22T18:42:19.830Z,1590172939.830 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Science.cfg
2020-05-22T18:42:19.983Z,1590172939.983 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Control.cfg
2020-05-22T18:42:20.086Z,1590172940.086 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2020-05-22T18:42:20.102Z,1590172940.102 [Module Loader](DEBUG): Loading Module at Modules/Dock.so
2020-05-22T18:42:20.209Z,1590172940.209 [Module Loader](DEBUG): Loaded Module: Dock (Contains behaviors and commands for docking)
2020-05-22T18:42:20.210Z,1590172940.210 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2020-05-22T18:42:20.283Z,1590172940.283 [VerticalControl](DEBUG): Construct VerticalControl.
2020-05-22T18:42:20.421Z,1590172940.421 [VerticalControl] Loaded
2020-05-22T18:42:20.422Z,1590172940.422 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2020-05-22T18:42:20.423Z,1590172940.423 [HorizontalControl](DEBUG): Construct HorizontalControl.
2020-05-22T18:42:20.523Z,1590172940.523 [HorizontalControl] Loaded
2020-05-22T18:42:20.523Z,1590172940.523 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2020-05-22T18:42:20.524Z,1590172940.524 [SpeedControl](DEBUG): Construct SpeedControl.
2020-05-22T18:42:20.531Z,1590172940.531 [SpeedControl] Loaded
2020-05-22T18:42:20.531Z,1590172940.531 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2020-05-22T18:42:20.532Z,1590172940.532 [LoopControl](DEBUG): Construct LoopControl.
2020-05-22T18:42:20.533Z,1590172940.533 [LoopControl] Loaded
2020-05-22T18:42:20.533Z,1590172940.533 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2020-05-22T18:42:20.534Z,1590172940.534 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2020-05-22T18:42:20.534Z,1590172940.534 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2020-05-22T18:42:20.600Z,1590172940.600 [DepthRateCalculator] Loaded
2020-05-22T18:42:20.600Z,1590172940.600 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2020-05-22T18:42:20.606Z,1590172940.606 [PitchRateCalculator] Loaded
2020-05-22T18:42:20.607Z,1590172940.607 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2020-05-22T18:42:20.625Z,1590172940.625 [SpeedCalculator] Loaded
2020-05-22T18:42:20.626Z,1590172940.626 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2020-05-22T18:42:20.652Z,1590172940.652 [TempGradientCalculator] Loaded
2020-05-22T18:42:20.652Z,1590172940.652 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2020-05-22T18:42:20.658Z,1590172940.658 [YawRateCalculator] Loaded
2020-05-22T18:42:20.658Z,1590172940.658 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2020-05-22T18:42:20.696Z,1590172940.696 [ElevatorOffsetCalculator] Loaded
2020-05-22T18:42:20.696Z,1590172940.696 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2020-05-22T18:42:20.697Z,1590172940.697 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2020-05-22T18:42:20.699Z,1590172940.699 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2020-05-22T18:42:20.749Z,1590172940.749 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2020-05-22T18:42:20.750Z,1590172940.750 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2020-05-22T18:42:20.898Z,1590172940.898 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2020-05-22T18:42:20.899Z,1590172940.899 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2020-05-22T18:42:21.265Z,1590172941.265 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2020-05-22T18:42:21.266Z,1590172941.266 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2020-05-22T18:42:21.453Z,1590172941.453 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2020-05-22T18:42:21.455Z,1590172941.455 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2020-05-22T18:42:22.439Z,1590172942.439 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_orientation
2020-05-22T18:42:22.470Z,1590172942.470 [AHRS_M2](INFO): created writer for : platform_orientation
2020-05-22T18:42:22.472Z,1590172942.472 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_magnetic_orientation
2020-05-22T18:42:22.508Z,1590172942.508 [AHRS_M2](INFO): created writer for : platform_magnetic_orientation
2020-05-22T18:42:22.508Z,1590172942.508 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_pitch_angle
2020-05-22T18:42:22.515Z,1590172942.515 [AHRS_M2](INFO): created writer for : platform_pitch_angle
2020-05-22T18:42:22.516Z,1590172942.516 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_roll_angle
2020-05-22T18:42:22.523Z,1590172942.523 [AHRS_M2](INFO): created writer for : platform_roll_angle
2020-05-22T18:42:22.726Z,1590172942.726 [AHRS_M2] Loaded
2020-05-22T18:42:22.727Z,1590172942.727 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2020-05-22T18:42:22.876Z,1590172942.876 [DataOverHttps] Loaded
2020-05-22T18:42:22.877Z,1590172942.877 [ComponentRegistry](DEBUG): Component "DataOverHttps" handled in its own thread.
2020-05-22T18:42:22.878Z,1590172942.878 [DataOverHttps ThreadHandler](DEBUG): Created PCaller Thread at 409F34E0
2020-05-22T18:42:22.878Z,1590172942.878 [DataOverHttps ThreadHandler](INFO): Protected caller Thread ID is 891
2020-05-22T18:42:22.896Z,1590172942.896 [Depth_Keller] Loaded
2020-05-22T18:42:22.896Z,1590172942.896 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2020-05-22T18:42:23.019Z,1590172943.019 [NAL9602] Loaded
2020-05-22T18:42:23.019Z,1590172943.019 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2020-05-22T18:42:23.065Z,1590172943.065 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-0/voltage_now
2020-05-22T18:42:23.066Z,1590172943.066 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-0/current_now
2020-05-22T18:42:23.066Z,1590172943.066 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-0/charge_now
2020-05-22T18:42:23.067Z,1590172943.067 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-0/charge_full
2020-05-22T18:42:23.067Z,1590172943.067 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-1/voltage_now
2020-05-22T18:42:23.068Z,1590172943.068 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-1/current_now
2020-05-22T18:42:23.068Z,1590172943.068 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-1/charge_now
2020-05-22T18:42:23.069Z,1590172943.069 [Onboard](ERROR): Can't open SysFS node file: /sys/class/power_supply/ds2782-1/charge_full
2020-05-22T18:42:23.069Z,1590172943.069 [Onboard] Loaded
2020-05-22T18:42:23.069Z,1590172943.069 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2020-05-22T18:42:23.074Z,1590172943.074 [Radio_Surface] Loaded
2020-05-22T18:42:23.074Z,1590172943.074 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2020-05-22T18:42:23.075Z,1590172943.075 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 40A234E0
2020-05-22T18:42:23.075Z,1590172943.075 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 892
2020-05-22T18:42:23.129Z,1590172943.129 [RDI_Pathfinder] Loaded
2020-05-22T18:42:23.129Z,1590172943.129 [ComponentRegistry](DEBUG): SyncComponent "RDI_Pathfinder" handled in the control thread.
2020-05-22T18:42:23.305Z,1590172943.305 [DAT] Loaded
2020-05-22T18:42:23.305Z,1590172943.305 [ComponentRegistry](DEBUG): SyncComponent "DAT" handled in the control thread.
2020-05-22T18:42:25.382Z,1590172945.382 [BPC1] Loaded
2020-05-22T18:42:25.383Z,1590172945.383 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2020-05-22T18:42:25.383Z,1590172945.383 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2020-05-22T18:42:25.384Z,1590172945.384 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2020-05-22T18:42:25.556Z,1590172945.556 [DeadReckonUsingMultipleVelocitySources] Loaded
2020-05-22T18:42:25.556Z,1590172945.556 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2020-05-22T18:42:25.582Z,1590172945.582 [NavChart] Loaded
2020-05-22T18:42:25.582Z,1590172945.582 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2020-05-22T18:42:25.587Z,1590172945.587 [UniversalFixResidualReporter] Loaded
2020-05-22T18:42:25.588Z,1590172945.588 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2020-05-22T18:42:25.588Z,1590172945.588 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2020-05-22T18:42:25.590Z,1590172945.590 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2020-05-22T18:42:25.768Z,1590172945.768 [SBIT](DEBUG): Construct Startup Built In Test.
2020-05-22T18:42:25.782Z,1590172945.782 [SBIT] Loaded
2020-05-22T18:42:25.783Z,1590172945.783 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2020-05-22T18:42:25.784Z,1590172945.784 [IBIT](DEBUG): Construct Initiated Built In Test.
2020-05-22T18:42:25.800Z,1590172945.800 [IBIT] Loaded
2020-05-22T18:42:25.800Z,1590172945.800 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2020-05-22T18:42:25.805Z,1590172945.805 [CBIT](DEBUG): Construct Continuous Built In Test.
2020-05-22T18:42:25.988Z,1590172945.988 [CBIT] Loaded
2020-05-22T18:42:25.989Z,1590172945.989 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2020-05-22T18:42:25.989Z,1590172945.989 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2020-05-22T18:42:25.990Z,1590172945.990 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2020-05-22T18:42:26.132Z,1590172946.132 [BuoyancyServo] Loaded
2020-05-22T18:42:26.132Z,1590172946.132 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2020-05-22T18:42:26.147Z,1590172946.147 [ElevatorServo] Loaded
2020-05-22T18:42:26.147Z,1590172946.147 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2020-05-22T18:42:26.162Z,1590172946.162 [MassServo] Loaded
2020-05-22T18:42:26.162Z,1590172946.162 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2020-05-22T18:42:26.176Z,1590172946.176 [RudderServo] Loaded
2020-05-22T18:42:26.176Z,1590172946.176 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2020-05-22T18:42:26.190Z,1590172946.190 [ThrusterServo] Loaded
2020-05-22T18:42:26.190Z,1590172946.190 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2020-05-22T18:42:26.191Z,1590172946.191 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2020-05-22T18:42:26.191Z,1590172946.191 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2020-05-22T18:42:26.232Z,1590172946.232 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2020-05-22T18:42:26.233Z,1590172946.233 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2020-05-22T18:42:26.584Z,1590172946.584 [BackSeatDriver] Loaded
2020-05-22T18:42:26.584Z,1590172946.584 [ComponentRegistry](DEBUG): Component "BackSeatDriver" handled in its own thread.
2020-05-22T18:42:26.586Z,1590172946.586 [BackSeatDriver ThreadHandler](DEBUG): Created PCaller Thread at 40C2C4E0
2020-05-22T18:42:26.586Z,1590172946.586 [BackSeatDriver ThreadHandler](INFO): Protected caller Thread ID is 893
2020-05-22T18:42:26.599Z,1590172946.599 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_density
2020-05-22T18:42:26.606Z,1590172946.606 [CTD_Seabird](INFO): created writer for : sea_water_density
2020-05-22T18:42:26.606Z,1590172946.606 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): depth
2020-05-22T18:42:26.612Z,1590172946.612 [CTD_Seabird](INFO): created writer for : depth
2020-05-22T18:42:26.613Z,1590172946.613 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_pressure
2020-05-22T18:42:26.620Z,1590172946.620 [CTD_Seabird](INFO): created writer for : sea_water_pressure
2020-05-22T18:42:26.620Z,1590172946.620 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_salinity
2020-05-22T18:42:26.627Z,1590172946.627 [CTD_Seabird](INFO): created writer for : sea_water_salinity
2020-05-22T18:42:26.628Z,1590172946.628 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_temperature
2020-05-22T18:42:26.635Z,1590172946.635 [CTD_Seabird](INFO): created writer for : sea_water_temperature
2020-05-22T18:42:26.635Z,1590172946.635 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_electrical_conductivity
2020-05-22T18:42:26.643Z,1590172946.643 [CTD_Seabird](INFO): created writer for : sea_water_electrical_conductivity
2020-05-22T18:42:26.643Z,1590172946.643 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): speed_of_sound_in_sea_water
2020-05-22T18:42:26.650Z,1590172946.650 [CTD_Seabird](INFO): created writer for : speed_of_sound_in_sea_water
2020-05-22T18:42:26.687Z,1590172946.687 [CTD_Seabird] Loaded
2020-05-22T18:42:26.687Z,1590172946.687 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2020-05-22T18:42:26.689Z,1590172946.689 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 40C5C4E0
2020-05-22T18:42:26.689Z,1590172946.689 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 894
2020-05-22T18:42:26.697Z,1590172946.697 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output470
2020-05-22T18:42:26.698Z,1590172946.698 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output470
2020-05-22T18:42:26.703Z,1590172946.703 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output650
2020-05-22T18:42:26.703Z,1590172946.703 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output650
2020-05-22T18:42:26.708Z,1590172946.708 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.OutputChl
2020-05-22T18:42:26.708Z,1590172946.708 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: OutputChl
2020-05-22T18:42:26.713Z,1590172946.713 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg470nm
2020-05-22T18:42:26.713Z,1590172946.713 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg470nm
2020-05-22T18:42:26.718Z,1590172946.718 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg650nm
2020-05-22T18:42:26.718Z,1590172946.718 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg650nm
2020-05-22T18:42:26.723Z,1590172946.723 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff470nm
2020-05-22T18:42:26.723Z,1590172946.723 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff470nm
2020-05-22T18:42:26.728Z,1590172946.728 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff650nm
2020-05-22T18:42:26.729Z,1590172946.729 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff650nm
2020-05-22T18:42:26.733Z,1590172946.733 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.739Z,1590172946.739 [WetLabsBB2FL](INFO): created writer for : mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.740Z,1590172946.740 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_median_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.740Z,1590172946.740 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_median_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.745Z,1590172946.745 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.745Z,1590172946.745 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.751Z,1590172946.751 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.751Z,1590172946.751 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2020-05-22T18:42:26.756Z,1590172946.756 [WetLabsBB2FL] Loaded
2020-05-22T18:42:26.756Z,1590172946.756 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2020-05-22T18:42:26.758Z,1590172946.758 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 40C8C4E0
2020-05-22T18:42:26.758Z,1590172946.758 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 895
2020-05-22T18:42:26.994Z,1590172946.994 [WetLabsUBAT..SerialDriver](INFO): Created logger
2020-05-22T18:42:26.997Z,1590172946.997 [WetLabsUBAT..SerialDriver](INFO): publishing on LCM channel WetLabsUBAT
2020-05-22T18:42:26.998Z,1590172946.998 [WetLabsUBAT..StreamSerialDriver](INFO): Created logger
2020-05-22T18:42:27.003Z,1590172947.003 [WetLabsUBAT](INFO): readConfig(): serialNo_: UBAT0051, uartName_: /dev/ttyC1, optionalArgs_: -ldir /mnt/mmc/LRAUV/Logs/latest
2020-05-22T18:42:27.003Z,1590172947.003 [WetLabsUBAT](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsUBAT.biolum_potential
2020-05-22T18:42:27.004Z,1590172947.004 [WetLabsUBAT](DEBUG): LcmSlateWriter::add(): dataName: biolum_potential
2020-05-22T18:42:27.009Z,1590172947.009 [WetLabsUBAT](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsUBAT.flow_rate
2020-05-22T18:42:27.009Z,1590172947.009 [WetLabsUBAT](DEBUG): LcmSlateWriter::add(): dataName: flow_rate
2020-05-22T18:42:27.015Z,1590172947.015 [WetLabsUBAT] Loaded
2020-05-22T18:42:27.016Z,1590172947.016 [ComponentRegistry](DEBUG): Component "WetLabsUBAT" handled in its own thread.
2020-05-22T18:42:27.017Z,1590172947.017 [WetLabsUBAT ThreadHandler](DEBUG): Created PCaller Thread at 40CBC4E0
2020-05-22T18:42:27.017Z,1590172947.017 [WetLabsUBAT ThreadHandler](INFO): Protected caller Thread ID is 896
2020-05-22T18:42:27.018Z,1590172947.018 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2020-05-22T18:42:27.023Z,1590172947.023 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2020-05-22T18:42:27.024Z,1590172947.024 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2020-05-22T18:42:27.034Z,1590172947.034 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2020-05-22T18:42:27.035Z,1590172947.035 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40CEC4E0
2020-05-22T18:42:27.035Z,1590172947.035 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 897
2020-05-22T18:42:27.041Z,1590172947.042 [Supervisor](INFO): Main Thread ID is 802
2020-05-22T18:42:27.042Z,1590172947.042 [Supervisor](DEBUG): Running supervisor.
2020-05-22T18:42:27.042Z,1590172947.042 [CommandLine ThreadHandler](INFO): Handler Thread ID is 898
2020-05-22T18:42:27.045Z,1590172947.045 [controlThread ThreadHandler](INFO): Handler Thread ID is 899
2020-05-22T18:42:27.046Z,1590172947.046 [controlThread](DEBUG): Initializing ControlThread
2020-05-22T18:42:27.047Z,1590172947.047 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2020-05-22T18:42:27.049Z,1590172947.049 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2020-05-22T18:42:27.050Z,1590172947.050 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2020-05-22T18:42:27.050Z,1590172947.050 [LoopControl](DEBUG): Initialize LoopControlComponent.
2020-05-22T18:42:27.051Z,1590172947.051 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2020-05-22T18:42:27.051Z,1590172947.051 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2020-05-22T18:42:27.051Z,1590172947.051 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2020-05-22T18:42:27.052Z,1590172947.052 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2020-05-22T18:42:27.052Z,1590172947.052 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2020-05-22T18:42:27.053Z,1590172947.053 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2020-05-22T18:42:27.059Z,1590172947.059 [NavChart](DEBUG): Initialize NavChart Navigation.
2020-05-22T18:42:27.060Z,1590172947.060 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2020-05-22T18:42:27.060Z,1590172947.060 [SBIT](INFO): Initialize SBIT Component.
2020-05-22T18:42:27.061Z,1590172947.061 [SBIT](IMPORTANT): git: 2020-05-06_C-4-ge907442
2020-05-22T18:42:27.061Z,1590172947.061 [SBIT](INFO): git hash: e907442e8d324ef9e313fad2e4afa1f9562153e8
2020-05-22T18:42:27.061Z,1590172947.061 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2020-05-22T18:42:27.062Z,1590172947.062 [SBIT](IMPORTANT): Kernel Version:#1 PREEMPT Thu Feb 21 11:17:40 PST 2019
2020-05-22T18:42:27.063Z,1590172947.063 [SBIT](INFO): Beginning SBIT in 76.000000 seconds.
2020-05-22T18:42:27.063Z,1590172947.063 [IBIT](INFO): Initialize IBIT Component.
2020-05-22T18:42:27.064Z,1590172947.064 [CBIT](DEBUG): Initialize CBIT Component.
2020-05-22T18:42:27.066Z,1590172947.066 [logger ThreadHandler](INFO): Handler Thread ID is 900
2020-05-22T18:42:27.077Z,1590172947.077 [CBIT](DEBUG): Initialized mux pins.
2020-05-22T18:42:27.077Z,1590172947.077 [CBIT](DEBUG): Initializing the watchdog timer.
2020-05-22T18:42:27.085Z,1590172947.085 [DataOverHttps ThreadHandler](INFO): Handler Thread ID is 901
2020-05-22T18:42:27.086Z,1590172947.086 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2020-05-22T18:42:27.097Z,1590172947.097 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 902
2020-05-22T18:42:27.101Z,1590172947.101 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2020-05-22T18:42:27.101Z,1590172947.101 [CBIT](DEBUG): Initializing heartbeat.
2020-05-22T18:42:27.109Z,1590172947.109 [BackSeatDriver ThreadHandler](INFO): Handler Thread ID is 903
2020-05-22T18:42:27.129Z,1590172947.129 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 904
2020-05-22T18:42:27.130Z,1590172947.130 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2020-05-22T18:42:27.134Z,1590172947.134 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 906
2020-05-22T18:42:27.136Z,1590172947.136 [WetLabsBB2FL](INFO): Powering down
2020-05-22T18:42:27.158Z,1590172947.158 [WetLabsUBAT ThreadHandler](INFO): Handler Thread ID is 907
2020-05-22T18:42:27.173Z,1590172947.173 [CBIT](DEBUG): Deactivating GF circuits.
2020-05-22T18:42:27.173Z,1590172947.173 [CBIT](DEBUG): Deactivating emergency mode.
2020-05-22T18:42:27.185Z,1590172947.185 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 908
2020-05-22T18:42:27.194Z,1590172947.194 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2020-05-22T18:42:27.194Z,1590172947.194 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2020-05-22T18:42:27.194Z,1590172947.194 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2020-05-22T18:42:27.195Z,1590172947.195 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2020-05-22T18:42:27.195Z,1590172947.195 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2020-05-22T18:42:27.195Z,1590172947.195 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2020-05-22T18:42:27.195Z,1590172947.195 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2020-05-22T18:42:27.195Z,1590172947.195 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2020-05-22T18:42:27.196Z,1590172947.196 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2020-05-22T18:42:27.197Z,1590172947.197 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2020-05-22T18:42:27.197Z,1590172947.197 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2020-05-22T18:42:27.209Z,1590172947.209 [CBIT](DEBUG): Backplane powered.
2020-05-22T18:42:27.211Z,1590172947.211 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2020-05-22T18:42:27.236Z,1590172947.236 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2020-05-22T18:42:27.274Z,1590172947.274 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2020-05-22T18:42:27.274Z,1590172947.274 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2020-05-22T18:42:27.350Z,1590172947.350 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2020-05-22T18:42:27.351Z,1590172947.351 [Default:A.Wait](DEBUG): Construct Wait.
2020-05-22T18:42:27.353Z,1590172947.353 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2020-05-22T18:42:27.403Z,1590172947.403 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2020-05-22T18:42:27.406Z,1590172947.406 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2020-05-22T18:42:27.422Z,1590172947.422 [Default:E.Execute](DEBUG): Construct Execute.
2020-05-22T18:42:27.441Z,1590172947.441 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2020-05-22T18:42:27.446Z,1590172947.446 [controlThread](DEBUG): Component order: CycleStarter,AHRS_M2,Depth_Keller,NAL9602,Onboard,RDI_Pathfinder,DAT,BPC1