2019-06-03T17:23:28.897Z,1559582608.897 [Supervisor](DEBUG): Initializing supervisor.
2019-06-03T17:23:28.900Z,1559582608.900 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2019-06-03T17:23:28.900Z,1559582608.900 [SyncHandler](INFO): Protected caller Thread ID is 806
2019-06-03T17:23:28.901Z,1559582608.901 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2019-06-03T17:23:28.902Z,1559582608.902 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2019-06-03T17:23:28.902Z,1559582608.902 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 807
2019-06-03T17:23:28.905Z,1559582608.905 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2019-06-03T17:23:28.917Z,1559582608.917 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2019-06-03T17:23:28.917Z,1559582608.917 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2019-06-03T17:23:28.918Z,1559582608.918 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 808
2019-06-03T17:23:28.919Z,1559582608.919 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2019-06-03T17:23:28.920Z,1559582608.920 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2019-06-03T17:23:28.920Z,1559582608.920 [logger ThreadHandler](INFO): Protected caller Thread ID is 809
2019-06-03T17:23:28.922Z,1559582608.922 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2019-06-03T17:23:28.922Z,1559582608.922 [Supervisor](INFO): Looking for Config files in directory: Config/
2019-06-03T17:23:28.926Z,1559582608.926 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2019-06-03T17:23:29.032Z,1559582609.032 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2019-06-03T17:23:29.033Z,1559582609.033 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2019-06-03T17:23:29.580Z,1559582609.580 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2019-06-03T17:23:29.582Z,1559582609.582 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2019-06-03T17:23:29.681Z,1559582609.681 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2019-06-03T17:23:29.683Z,1559582609.683 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2019-06-03T17:23:29.786Z,1559582609.786 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2019-06-03T17:23:29.788Z,1559582609.787 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2019-06-03T17:23:29.869Z,1559582609.869 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2019-06-03T17:23:30.008Z,1559582610.008 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2019-06-03T17:23:30.009Z,1559582610.009 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2019-06-03T17:23:30.306Z,1559582610.306 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2019-06-03T17:23:30.308Z,1559582610.308 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2019-06-03T17:23:30.767Z,1559582610.767 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2019-06-03T17:23:30.769Z,1559582610.769 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2019-06-03T17:23:30.914Z,1559582610.914 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2019-06-03T17:23:30.915Z,1559582610.915 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2019-06-03T17:23:31.115Z,1559582611.115 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2019-06-03T17:23:31.117Z,1559582611.117 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2019-06-03T17:23:31.573Z,1559582611.573 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2019-06-03T17:23:31.574Z,1559582611.574 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2019-06-03T17:23:31.792Z,1559582611.792 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2019-06-03T17:23:31.794Z,1559582611.794 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2019-06-03T17:23:32.083Z,1559582612.083 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2019-06-03T17:23:32.084Z,1559582612.084 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2019-06-03T17:23:32.471Z,1559582612.471 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2019-06-03T17:23:32.471Z,1559582612.471 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2019-06-03T17:23:33.464Z,1559582613.464 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2019-06-03T17:23:33.466Z,1559582613.466 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-pontus/
2019-06-03T17:23:33.469Z,1559582613.469 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/secure.cfg
2019-06-03T17:23:33.554Z,1559582613.554 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Sensor.cfg
2019-06-03T17:23:33.708Z,1559582613.708 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Servo.cfg
2019-06-03T17:23:33.817Z,1559582613.817 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Simulator.cfg
2019-06-03T17:23:33.904Z,1559582613.904 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/logger.cfg
2019-06-03T17:23:34.000Z,1559582614.000 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/vehicle.cfg
2019-06-03T17:23:34.195Z,1559582614.195 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Battery.cfg
2019-06-03T17:23:34.421Z,1559582614.421 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2019-06-03T17:23:34.422Z,1559582614.422 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Navigation.cfg
2019-06-03T17:23:34.517Z,1559582614.517 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/BIT.cfg
2019-06-03T17:23:34.616Z,1559582614.616 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Science.cfg
2019-06-03T17:23:34.733Z,1559582614.733 [Supervisor](INFO): Opening Config file at: Config/lrauv-pontus/Control.cfg
2019-06-03T17:23:34.834Z,1559582614.834 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-pontus/root/
2019-06-03T17:23:34.834Z,1559582614.834 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2019-06-03T17:23:34.847Z,1559582614.847 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2019-06-03T17:23:34.936Z,1559582614.936 [VerticalControl](DEBUG): Construct VerticalControl.
2019-06-03T17:23:35.049Z,1559582615.049 [VerticalControl] Loaded
2019-06-03T17:23:35.049Z,1559582615.049 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2019-06-03T17:23:35.050Z,1559582615.050 [HorizontalControl](DEBUG): Construct HorizontalControl.
2019-06-03T17:23:35.117Z,1559582615.117 [HorizontalControl] Loaded
2019-06-03T17:23:35.117Z,1559582615.117 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2019-06-03T17:23:35.118Z,1559582615.118 [SpeedControl](DEBUG): Construct SpeedControl.
2019-06-03T17:23:35.124Z,1559582615.124 [SpeedControl] Loaded
2019-06-03T17:23:35.124Z,1559582615.124 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2019-06-03T17:23:35.125Z,1559582615.125 [LoopControl](DEBUG): Construct LoopControl.
2019-06-03T17:23:35.125Z,1559582615.125 [LoopControl] Loaded
2019-06-03T17:23:35.126Z,1559582615.126 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2019-06-03T17:23:35.126Z,1559582615.126 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2019-06-03T17:23:35.128Z,1559582615.128 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2019-06-03T17:23:35.183Z,1559582615.183 [DepthRateCalculator] Loaded
2019-06-03T17:23:35.184Z,1559582615.184 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2019-06-03T17:23:35.189Z,1559582615.189 [PitchRateCalculator] Loaded
2019-06-03T17:23:35.189Z,1559582615.189 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2019-06-03T17:23:35.204Z,1559582615.204 [SpeedCalculator] Loaded
2019-06-03T17:23:35.205Z,1559582615.205 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2019-06-03T17:23:35.226Z,1559582615.226 [TempGradientCalculator] Loaded
2019-06-03T17:23:35.226Z,1559582615.226 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2019-06-03T17:23:35.231Z,1559582615.231 [YawRateCalculator] Loaded
2019-06-03T17:23:35.231Z,1559582615.231 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2019-06-03T17:23:35.259Z,1559582615.259 [ElevatorOffsetCalculator] Loaded
2019-06-03T17:23:35.260Z,1559582615.260 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2019-06-03T17:23:35.260Z,1559582615.260 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2019-06-03T17:23:35.261Z,1559582615.261 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2019-06-03T17:23:35.302Z,1559582615.302 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2019-06-03T17:23:35.303Z,1559582615.303 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2019-06-03T17:23:35.412Z,1559582615.412 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2019-06-03T17:23:35.413Z,1559582615.413 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2019-06-03T17:23:35.753Z,1559582615.753 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2019-06-03T17:23:35.753Z,1559582615.753 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2019-06-03T17:23:35.877Z,1559582615.877 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2019-06-03T17:23:35.879Z,1559582615.879 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2019-06-03T17:23:36.418Z,1559582616.418 [Depth_Keller] Loaded
2019-06-03T17:23:36.419Z,1559582616.419 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2019-06-03T17:23:36.470Z,1559582616.470 [Micromodem] Loaded
2019-06-03T17:23:36.471Z,1559582616.471 [ComponentRegistry](DEBUG): SyncComponent "Micromodem" handled in the control thread.
2019-06-03T17:23:36.570Z,1559582616.570 [NAL9602] Loaded
2019-06-03T17:23:36.570Z,1559582616.570 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2019-06-03T17:23:36.586Z,1559582616.586 [Onboard] Loaded
2019-06-03T17:23:36.586Z,1559582616.586 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2019-06-03T17:23:36.593Z,1559582616.593 [Radio_Surface] Loaded
2019-06-03T17:23:36.593Z,1559582616.593 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2019-06-03T17:23:36.594Z,1559582616.594 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 408D04E0
2019-06-03T17:23:36.594Z,1559582616.594 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 889
2019-06-03T17:23:38.315Z,1559582618.315 [BPC1] Loaded
2019-06-03T17:23:38.316Z,1559582618.316 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2019-06-03T17:23:38.316Z,1559582618.316 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2019-06-03T17:23:38.317Z,1559582618.317 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2019-06-03T17:23:38.438Z,1559582618.438 [DeadReckonUsingMultipleVelocitySources] Loaded
2019-06-03T17:23:38.438Z,1559582618.438 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2019-06-03T17:23:38.459Z,1559582618.459 [NavChart] Loaded
2019-06-03T17:23:38.459Z,1559582618.459 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2019-06-03T17:23:38.463Z,1559582618.463 [UniversalFixResidualReporter] Loaded
2019-06-03T17:23:38.464Z,1559582618.464 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2019-06-03T17:23:38.464Z,1559582618.464 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2019-06-03T17:23:38.465Z,1559582618.465 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2019-06-03T17:23:38.625Z,1559582618.625 [SBIT](DEBUG): Construct Startup Built In Test.
2019-06-03T17:23:38.637Z,1559582618.637 [SBIT] Loaded
2019-06-03T17:23:38.637Z,1559582618.637 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2019-06-03T17:23:38.637Z,1559582618.637 [IBIT](DEBUG): Construct Initiated Built In Test.
2019-06-03T17:23:38.649Z,1559582618.649 [IBIT] Loaded
2019-06-03T17:23:38.649Z,1559582618.649 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2019-06-03T17:23:38.653Z,1559582618.653 [CBIT](DEBUG): Construct Continuous Built In Test.
2019-06-03T17:23:38.791Z,1559582618.791 [CBIT] Loaded
2019-06-03T17:23:38.791Z,1559582618.791 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2019-06-03T17:23:38.792Z,1559582618.792 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2019-06-03T17:23:38.792Z,1559582618.792 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2019-06-03T17:23:38.918Z,1559582618.918 [BuoyancyServo] Loaded
2019-06-03T17:23:38.918Z,1559582618.918 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2019-06-03T17:23:38.930Z,1559582618.930 [ElevatorServo] Loaded
2019-06-03T17:23:38.930Z,1559582618.930 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2019-06-03T17:23:38.941Z,1559582618.941 [MassServo] Loaded
2019-06-03T17:23:38.941Z,1559582618.941 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2019-06-03T17:23:38.952Z,1559582618.952 [RudderServo] Loaded
2019-06-03T17:23:38.952Z,1559582618.952 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2019-06-03T17:23:38.963Z,1559582618.963 [ThrusterServo] Loaded
2019-06-03T17:23:38.963Z,1559582618.963 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2019-06-03T17:23:38.964Z,1559582618.964 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2019-06-03T17:23:38.964Z,1559582618.964 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2019-06-03T17:23:38.988Z,1559582618.988 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2019-06-03T17:23:38.989Z,1559582618.989 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2019-06-03T17:23:39.311Z,1559582619.311 [CTD_NeilBrown] Loaded
2019-06-03T17:23:39.311Z,1559582619.311 [ComponentRegistry](DEBUG): Component "CTD_NeilBrown" handled in its own thread.
2019-06-03T17:23:39.312Z,1559582619.312 [CTD_NeilBrown ThreadHandler](DEBUG): Created PCaller Thread at 40A4C4E0
2019-06-03T17:23:39.312Z,1559582619.312 [CTD_NeilBrown ThreadHandler](INFO): Protected caller Thread ID is 890
2019-06-03T17:23:39.327Z,1559582619.327 [PAR_Licor] Loaded
2019-06-03T17:23:39.327Z,1559582619.327 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2019-06-03T17:23:39.375Z,1559582619.375 [WetLabsBB2FL] Loaded
2019-06-03T17:23:39.375Z,1559582619.375 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2019-06-03T17:23:39.376Z,1559582619.376 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 40A7C4E0
2019-06-03T17:23:39.377Z,1559582619.377 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 891
2019-06-03T17:23:39.377Z,1559582619.377 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2019-06-03T17:23:39.381Z,1559582619.381 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2019-06-03T17:23:39.382Z,1559582619.382 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2019-06-03T17:23:39.389Z,1559582619.389 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2019-06-03T17:23:39.390Z,1559582619.390 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40AAC4E0
2019-06-03T17:23:39.390Z,1559582619.390 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 892
2019-06-03T17:23:39.395Z,1559582619.395 [Supervisor](INFO): Main Thread ID is 802
2019-06-03T17:23:39.395Z,1559582619.395 [Supervisor](DEBUG): Running supervisor.
2019-06-03T17:23:39.395Z,1559582619.395 [CommandLine ThreadHandler](INFO): Handler Thread ID is 893
2019-06-03T17:23:39.398Z,1559582619.398 [controlThread ThreadHandler](INFO): Handler Thread ID is 894
2019-06-03T17:23:39.398Z,1559582619.398 [controlThread](DEBUG): Initializing ControlThread
2019-06-03T17:23:39.399Z,1559582619.399 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2019-06-03T17:23:39.401Z,1559582619.401 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2019-06-03T17:23:39.401Z,1559582619.401 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2019-06-03T17:23:39.402Z,1559582619.402 [LoopControl](DEBUG): Initialize LoopControlComponent.
2019-06-03T17:23:39.402Z,1559582619.402 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2019-06-03T17:23:39.402Z,1559582619.402 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2019-06-03T17:23:39.403Z,1559582619.403 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2019-06-03T17:23:39.403Z,1559582619.403 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2019-06-03T17:23:39.404Z,1559582619.404 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2019-06-03T17:23:39.404Z,1559582619.404 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2019-06-03T17:23:39.409Z,1559582619.409 [NavChart](DEBUG): Initialize NavChart Navigation.
2019-06-03T17:23:39.409Z,1559582619.409 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2019-06-03T17:23:39.410Z,1559582619.410 [SBIT](INFO): Initialize SBIT Component.
2019-06-03T17:23:39.410Z,1559582619.410 [SBIT](IMPORTANT): git: 2019-05-01-19-g6ef4ecc
2019-06-03T17:23:39.410Z,1559582619.410 [SBIT](INFO): git hash: 6ef4ecc926d3cc84e5878e2d73d98fd38ff7dcf7
2019-06-03T17:23:39.411Z,1559582619.411 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2019-06-03T17:23:39.411Z,1559582619.411 [SBIT](IMPORTANT): Kernel Version:#1 PREEMPT Thu Feb 21 11:17:40 PST 2019
2019-06-03T17:23:39.412Z,1559582619.412 [SBIT](INFO): Beginning SBIT in 28.000000 seconds.
2019-06-03T17:23:39.413Z,1559582619.413 [IBIT](INFO): Initialize IBIT Component.
2019-06-03T17:23:39.413Z,1559582619.413 [CBIT](DEBUG): Initialize CBIT Component.
2019-06-03T17:23:39.414Z,1559582619.414 [logger ThreadHandler](INFO): Handler Thread ID is 895
2019-06-03T17:23:39.428Z,1559582619.428 [CBIT](DEBUG): Initialized mux pins.
2019-06-03T17:23:39.428Z,1559582619.428 [CBIT](DEBUG): Initializing the watchdog timer.
2019-06-03T17:23:39.432Z,1559582619.432 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 896
2019-06-03T17:23:39.440Z,1559582619.440 [CTD_NeilBrown ThreadHandler](INFO): Handler Thread ID is 897
2019-06-03T17:23:39.448Z,1559582619.448 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 898
2019-06-03T17:23:39.449Z,1559582619.449 [WetLabsBB2FL](INFO): Powering down
2019-06-03T17:23:39.452Z,1559582619.452 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2019-06-03T17:23:39.452Z,1559582619.452 [CBIT](DEBUG): Initializing heartbeat.
2019-06-03T17:23:39.476Z,1559582619.476 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 899
2019-06-03T17:23:39.485Z,1559582619.485 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2019-06-03T17:23:39.485Z,1559582619.485 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2019-06-03T17:23:39.485Z,1559582619.485 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2019-06-03T17:23:39.485Z,1559582619.485 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2019-06-03T17:23:39.486Z,1559582619.486 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2019-06-03T17:23:39.486Z,1559582619.486 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2019-06-03T17:23:39.486Z,1559582619.486 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2019-06-03T17:23:39.486Z,1559582619.486 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2019-06-03T17:23:39.486Z,1559582619.486 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2019-06-03T17:23:39.487Z,1559582619.487 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2019-06-03T17:23:39.487Z,1559582619.487 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2019-06-03T17:23:39.487Z,1559582619.487 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2019-06-03T17:23:39.487Z,1559582619.487 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2019-06-03T17:23:39.488Z,1559582619.488 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2019-06-03T17:23:39.488Z,1559582619.488 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2019-06-03T17:23:39.488Z,1559582619.488 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2019-06-03T17:23:39.523Z,1559582619.523 [CBIT](DEBUG): Deactivating GF circuits.
2019-06-03T17:23:39.524Z,1559582619.524 [CBIT](DEBUG): Deactivating emergency mode.
2019-06-03T17:23:39.560Z,1559582619.560 [CBIT](DEBUG): Backplane powered.
2019-06-03T17:23:39.564Z,1559582619.564 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2019-06-03T17:23:39.587Z,1559582619.587 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2019-06-03T17:23:39.630Z,1559582619.630 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2019-06-03T17:23:39.631Z,1559582619.631 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2019-06-03T17:23:39.704Z,1559582619.704 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2019-06-03T17:23:39.705Z,1559582619.705 [Default:A.Wait](DEBUG): Construct Wait.
2019-06-03T17:23:39.707Z,1559582619.707 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2019-06-03T17:23:39.730Z,1559582619.730 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2019-06-03T17:23:39.760Z,1559582619.760 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2019-06-03T17:23:39.782Z,1559582619.782 [Default:E.Execute](DEBUG): Construct Execute.
2019-06-03T17:23:39.785Z,1559582619.785 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2019-06-03T17:23:39.796Z,1559582619.796 [controlThread](DEBUG): Component order: CycleStarter,Depth_Keller,Micromodem,NAL9602,Onboard,BPC1,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2019-06-03T17:23:39.828Z,1559582619.828 [Depth_Keller](ERROR): Pressure reading out of range: 1925.893799 decibar
2019-06-03T17:23:39.836Z,1559582619.836 [Radio_Surface](INFO): Powering up
2019-06-03T17:23:39.896Z,1559582619.896 [DepthRateCalculator](ERROR): Depth measurement is not active
2019-06-03T17:23:40.290Z,1559582620.290 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2019-06-03T17:23:40.296Z,1559582620.296 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2019-06-03T17:23:40.297Z,1559582620.297 [ElevatorServo](DEBUG): Initializing EZServoServo.
2019-06-03T17:23:40.304Z,1559582620.304 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2019-06-03T17:23:40.305Z,1559582620.305 [MassServo](DEBUG): Initializing EZServoServo.
2019-06-03T17:23:40.312Z,1559582620.312 [MassServo](DEBUG): Initializing MassServo.
2019-06-03T17:23:40.313Z,1559582620.313 [RudderServo](DEBUG): Initializing EZServoServo.
2019-06-03T17:23:40.320Z,1559582620.320 [RudderServo](DEBUG): Initializing RudderServo.
2019-06-03T17:23:40.321Z,1559582620.321 [ThrusterServo](DEBUG): Initializing EZServoServo.
2019-06-03T17:23:40.328Z,1559582620.328 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2019-06-03T17:23:40.388Z,1559582620.388 [Micromodem](INFO): Powering up
2019-06-03T17:23:40.389Z,1559582620.389 [Micromodem](DEBUG): Initializing Micromodem.
2019-06-03T17:23:40.460Z,1559582620.460 [DepthRateCalculator](ERROR): Depth measurement is not active
2019-06-03T17:23:45.193Z,1559582625.193 [Micromodem](INFO): Nmea out: $CCCFG,ALL,0*33

2019-06-03T17:23:45.596Z,1559582625.596 [Depth_Keller](ERROR): Pressure reading out of range: -10.213573 decibar
2019-06-03T17:23:46.808Z,1559582626.808 [Depth_Keller](ERROR): Pressure reading out of range: -12.636770 decibar
2019-06-03T17:23:47.000Z,1559582627.000 [CommandLine](IMPORTANT): got command quit
2019-06-03T17:23:48.004Z,1559582628.004 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2019-06-03T17:23:48.004Z,1559582628.004 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:48.004Z,1559582628.004 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:48.047Z,1559582628.047 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2019-06-03T17:23:48.048Z,1559582628.048 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:48.048Z,1559582628.048 [CommandLine](INFO): Join timeout helper Thread ID is 908
2019-06-03T17:23:48.068Z,1559582628.068 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2019-06-03T17:23:48.068Z,1559582628.068 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:48.068Z,1559582628.068 [NavChartDb](INFO): Join timeout helper Thread ID is 909
2019-06-03T17:23:50.444Z,1559582630.444 [Depth_Keller](ERROR): Pressure reading out of range: -21.702755 decibar
2019-06-03T17:23:53.619Z,1559582633.619 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:53.619Z,1559582633.619 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:53.620Z,1559582633.620 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2019-06-03T17:23:53.620Z,1559582633.620 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:53.620Z,1559582633.620 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 910
2019-06-03T17:23:54.064Z,1559582634.064 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:54.064Z,1559582634.064 [WetLabsBB2FL](INFO): Powering down
2019-06-03T17:23:54.065Z,1559582634.065 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.084Z,1559582634.084 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2019-06-03T17:23:54.084Z,1559582634.084 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.084Z,1559582634.084 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 911
2019-06-03T17:23:54.140Z,1559582634.140 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:54.140Z,1559582634.140 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.148Z,1559582634.148 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2019-06-03T17:23:54.148Z,1559582634.148 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.148Z,1559582634.148 [Radio_Surface](INFO): Join timeout helper Thread ID is 912
2019-06-03T17:23:54.380Z,1559582634.380 [Radio_Surface](INFO): Powering down
2019-06-03T17:23:54.381Z,1559582634.381 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:54.381Z,1559582634.381 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.396Z,1559582634.396 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2019-06-03T17:23:54.397Z,1559582634.397 [logger ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.397Z,1559582634.397 [logger](INFO): Join timeout helper Thread ID is 913
2019-06-03T17:23:54.439Z,1559582634.439 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:54.439Z,1559582634.439 [logger ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.448Z,1559582634.448 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2019-06-03T17:23:54.448Z,1559582634.448 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.448Z,1559582634.448 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2019-06-03T17:23:54.449Z,1559582634.449 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.449Z,1559582634.449 [controlThread](INFO): Join timeout helper Thread ID is 914
2019-06-03T17:23:54.476Z,1559582634.476 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2019-06-03T17:23:54.476Z,1559582634.476 [controlThread](DEBUG): Uninitializing ControlThread
2019-06-03T17:23:54.476Z,1559582634.476 [Micromodem](INFO): Powering down
2019-06-03T17:23:54.592Z,1559582634.592 [NAL9602](INFO): Powering down
2019-06-03T17:23:54.612Z,1559582634.612 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2019-06-03T17:23:54.613Z,1559582634.613 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2019-06-03T17:23:54.613Z,1559582634.613 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2019-06-03T17:23:54.614Z,1559582634.614 [MissionManager](INFO): Uninitializing Mission Default
2019-06-03T17:23:54.616Z,1559582634.616 [MissionManager](INFO): Uninitializing Mission Startup
2019-06-03T17:23:54.617Z,1559582634.617 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2019-06-03T17:23:54.617Z,1559582634.617 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2019-06-03T17:23:54.618Z,1559582634.618 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2019-06-03T17:23:54.618Z,1559582634.618 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2019-06-03T17:23:54.618Z,1559582634.618 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2019-06-03T17:23:54.618Z,1559582634.618 [BuoyancyServo](INFO): Powering down
2019-06-03T17:23:54.632Z,1559582634.632 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2019-06-03T17:23:54.632Z,1559582634.632 [ElevatorServo](INFO): Powering down
2019-06-03T17:23:54.650Z,1559582634.650 [MassServo](DEBUG): Uninitialize Mass Servo.
2019-06-03T17:23:54.650Z,1559582634.650 [MassServo](INFO): Powering down
2019-06-03T17:23:54.651Z,1559582634.651 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2019-06-03T17:23:54.651Z,1559582634.651 [RudderServo](INFO): Powering down
2019-06-03T17:23:54.652Z,1559582634.652 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2019-06-03T17:23:54.652Z,1559582634.652 [ThrusterServo](INFO): Powering down
2019-06-03T17:23:54.653Z,1559582634.653 [SBIT](DEBUG): Uninitialize SBIT Component.
2019-06-03T17:23:54.653Z,1559582634.653 [IBIT](DEBUG): Uninitialize IBIT Component.
2019-06-03T17:23:54.654Z,1559582634.654 [CBIT](DEBUG): Uninitialize CBIT Component.
2019-06-03T17:23:54.654Z,1559582634.654 [CBIT](DEBUG): Powering off loads.
2019-06-03T17:23:54.667Z,1559582634.667 [CBIT](DEBUG): Disabling WDT.
2019-06-03T17:23:54.679Z,1559582634.679 [CBIT](DEBUG): Opening all GF detection circuits.
2019-06-03T17:23:54.680Z,1559582634.680 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.769Z,1559582634.769 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.935Z,1559582634.935 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.938Z,1559582634.938 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.946Z,1559582634.946 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-06-03T17:23:54.999Z,1559582634.999 [logger ThreadHandler](INFO): Thread cancelled.