2016-09-01T15:21:58.096Z,1472743318.096 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2016-09-01T15:22:03.690Z,1472743323.690 [SBIT](IMPORTANT): git: 2016-07-30
2016-09-01T15:22:03.690Z,1472743323.690 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2016-09-01T15:22:03.690Z,1472743323.690 [SBIT](IMPORTANT): Kernel Version:#639 PREEMPT Wed Mar 12 12:53:33 PDT 2014
2016-09-01T15:22:06.068Z,1472743326.068 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2016-09-01T15:23:07.348Z,1472743387.348 [SBIT](IMPORTANT): Beginning Startup BIT
2016-09-01T15:23:07.350Z,1472743387.350 [CBIT](IMPORTANT): Beginning GF scan
2016-09-01T15:23:33.644Z,1472743413.644 [CBIT](IMPORTANT): No ground fault detected
2016-09-01T15:24:01.314Z,1472743441.314 [SBIT](IMPORTANT): SBIT PASSED
2016-09-01T15:24:01.706Z,1472743441.706 [MissionManager](IMPORTANT): Started mission Startup
2016-09-01T15:25:44.501Z,1472743544.501 [MissionManager](IMPORTANT): Started mission Default
2016-09-01T15:27:14.642Z,1472743634.642 [CommandLine](IMPORTANT): got command show best height_above_sea_floor
2016-09-01T15:27:14.643Z,1472743634.643 [CommandLine](IMPORTANT): height_above_sea_floor best is NavChart.height_above_sea_floor
2016-09-01T15:27:19.963Z,1472743639.963 [CommandLine](IMPORTANT): got command get height_above_sea_floor
2016-09-01T15:27:19.964Z,1472743639.964 [CommandLine](IMPORTANT): height_above_sea_floor 59.499031 m
2016-09-01T15:27:25.214Z,1472743645.214 [PNI_TCM](FAULT): Failed to acquire valid data within timeout.
2016-09-01T15:27:55.292Z,1472743675.292 [DataOverHttps](IMPORTANT): SBD MOMSN=4485888, MTMSN=20160901T152732
2016-09-01T15:28:01.673Z,1472743681.673 [CommandLine](IMPORTANT): got command schedule asap "load Science/sci2.xml;set sci2.NeedCommsTime 45 minute;set sci2.Lat1 36.88 degree;set sci2.Lon1 -121.99 degree;set sci2.Lat2 36.86 degree;set sci2.Lon2 -122.2 degree;set sci2.YoYoMinDepth 3 meter;set sci2.YoYoMaxDepth 40 meter" 2cixy 1 2.000000
2016-09-01T15:28:01.673Z,1472743681.673 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=2cixy
2016-09-01T15:28:01.674Z,1472743681.674 [CommandLine](IMPORTANT): Scheduled #1 (#1 of 2 with id='2cixy'): "load Science/sci2.xml;set sci2.NeedCommsTime 45 minute;set sci2.Lat1 36.88 degree;set sci2.Lon1 -121.99 degree;set sci2.Lat2 36.86 degree;set sci2.Lon2 -122.2 degree;set sci2.YoYoMinDepth 3 meter;set sci2.YoYoMaxDepth 40 meter" ASAP
2016-09-01T15:28:02.427Z,1472743682.427 [DataOverHttps](IMPORTANT): SBD MTMSN=20160901T152739
2016-09-01T15:28:07.805Z,1472743687.805 [CommandLine](IMPORTANT): got command schedule asap "set sci2.YoYoMinAltitude 10 meter;set sci2.MinAltitude 12 meter;set sci2.MaxDepth 50 meter;run " 2cixy 2 2.000000
2016-09-01T15:28:07.805Z,1472743687.805 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=2cixy
2016-09-01T15:28:07.806Z,1472743687.806 [CommandLine](IMPORTANT): Scheduled #2 (#2 of 2 with id='2cixy'): "set sci2.YoYoMinAltitude 10 meter;set sci2.MinAltitude 12 meter;set sci2.MaxDepth 50 meter;run " ASAP
2016-09-01T15:28:07.944Z,1472743687.944 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2016-09-01T15:28:11.245Z,1472743691.245 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2016-09-01T15:28:28.621Z,1472743708.621 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 45.000000 minute
2016-09-01T15:28:28.622Z,1472743708.622 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.880001 degree
2016-09-01T15:28:28.623Z,1472743708.623 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.989998 degree
2016-09-01T15:28:28.624Z,1472743708.624 [CommandLine](IMPORTANT): got command set sci2.Lat2 36.860001 degree
2016-09-01T15:28:28.709Z,1472743708.709 [CommandLine](IMPORTANT): got command set sci2.Lon2 -122.199997 degree
2016-09-01T15:28:28.710Z,1472743708.710 [CommandLine](IMPORTANT): got command set sci2.YoYoMinDepth 3.000000 meter
2016-09-01T15:28:28.711Z,1472743708.711 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 40.000000 meter
2016-09-01T15:28:41.842Z,1472743721.842 [CommandLine](IMPORTANT): got command set sci2.YoYoMinAltitude 10.000000 meter
2016-09-01T15:28:41.843Z,1472743721.843 [CommandLine](IMPORTANT): got command set sci2.MinAltitude 12.000000 meter
2016-09-01T15:28:41.844Z,1472743721.844 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 50.000000 meter
2016-09-01T15:28:41.845Z,1472743721.845 [CommandLine](IMPORTANT): got command run 
2016-09-01T15:28:41.847Z,1472743721.847 [CommandLine](IMPORTANT): Running 
2016-09-01T15:28:44.493Z,1472743724.493 [MissionManager](IMPORTANT): Started mission sci2
2016-09-01T15:28:45.752Z,1472743725.752 [ThrusterServo](FAULT): getVelocity uart error serial timeout
2016-09-01T15:28:45.752Z,1472743725.752 [ThrusterServo](FAULT): Thruster uart error: serial timeout
2016-09-01T15:34:43.963Z,1472744083.963 [sci2:NeedComms:F.Buoyancy:A_Timeout:A](IMPORTANT): buoyancy pump-down timeout at 952.176983 ml 
2016-09-01T16:20:47.530Z,1472746847.530 [ThrusterServo](FAULT): getVelocity uart error serial timeout
2016-09-01T16:20:47.530Z,1472746847.530 [ThrusterServo](FAULT): Thruster uart error: serial timeout
2016-09-01T16:23:17.752Z,1472746997.752 [CBIT](IMPORTANT): EFC elev offset (n=7200): elevOffset = 2.266263 degree
2016-09-01T16:24:38.507Z,1472747078.507 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=15758, MT Status=1, MTMSN=505
2016-09-01T16:24:39.127Z,1472747079.127 [CommandLine](IMPORTANT): got command stop
2016-09-01T16:24:39.128Z,1472747079.128 [CommandLine](IMPORTANT): Scheduling is paused
2016-09-01T16:24:39.430Z,1472747079.430 [MissionManager](IMPORTANT): Started mission Default
2016-09-01T16:32:24.454Z,1472747544.454 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 7.743879 min 
2016-09-01T16:33:36.025Z,1472747616.025 [DataOverHttps](IMPORTANT): SBD MTMSN=20160901T163312
2016-09-01T16:33:42.587Z,1472747622.587 [CommandLine](IMPORTANT): got command schedule asap "load Science/sci2.xml;set sci2.NeedCommsTime 45 minute;set sci2.Lat1 36.88 degree;set sci2.Lon1 -121.99 degree;set sci2.Lat2 36.86 degree;set sci2.Lon2 -122.2 degree;set sci2.YoYoMinDepth 3 meter;set sci2.YoYoMaxDepth 40 meter" 2clxj 1 2.000000
2016-09-01T16:33:42.588Z,1472747622.588 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=2clxj
2016-09-01T16:33:42.589Z,1472747622.589 [CommandLine](IMPORTANT): Scheduled #3 (#1 of 2 with id='2clxj'): "load Science/sci2.xml;set sci2.NeedCommsTime 45 minute;set sci2.Lat1 36.88 degree;set sci2.Lon1 -121.99 degree;set sci2.Lat2 36.86 degree;set sci2.Lon2 -122.2 degree;set sci2.YoYoMinDepth 3 meter;set sci2.YoYoMaxDepth 40 meter" ASAP
2016-09-01T16:33:43.276Z,1472747623.276 [DataOverHttps](IMPORTANT): SBD MTMSN=20160901T163320
2016-09-01T16:33:48.001Z,1472747628.001 [CommandLine](IMPORTANT): got command schedule asap "set sci2.YoYoMinAltitude 10 meter;set sci2.MinAltitude 12 meter;set sci2.MaxDepth 50 meter;run " 2clxj 2 2.000000
2016-09-01T16:33:48.001Z,1472747628.001 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=2clxj
2016-09-01T16:33:48.002Z,1472747628.002 [CommandLine](IMPORTANT): Scheduled #4 (#2 of 2 with id='2clxj'): "set sci2.YoYoMinAltitude 10 meter;set sci2.MinAltitude 12 meter;set sci2.MaxDepth 50 meter;run " ASAP
2016-09-01T16:33:48.070Z,1472747628.070 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2016-09-01T16:33:49.736Z,1472747629.736 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2016-09-01T16:34:09.160Z,1472747649.160 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 45.000000 minute
2016-09-01T16:34:09.161Z,1472747649.161 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.880001 degree
2016-09-01T16:34:09.171Z,1472747649.171 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.989998 degree
2016-09-01T16:34:09.172Z,1472747649.172 [CommandLine](IMPORTANT): got command set sci2.Lat2 36.860001 degree
2016-09-01T16:34:09.173Z,1472747649.173 [CommandLine](IMPORTANT): got command set sci2.Lon2 -122.199997 degree
2016-09-01T16:34:09.182Z,1472747649.182 [CommandLine](IMPORTANT): got command set sci2.YoYoMinDepth 3.000000 meter
2016-09-01T16:34:09.183Z,1472747649.183 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 40.000000 meter
2016-09-01T16:34:20.309Z,1472747660.309 [CommandLine](IMPORTANT): got command set sci2.YoYoMinAltitude 10.000000 meter
2016-09-01T16:34:20.310Z,1472747660.310 [CommandLine](IMPORTANT): got command set sci2.MinAltitude 12.000000 meter
2016-09-01T16:34:20.311Z,1472747660.311 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 50.000000 meter
2016-09-01T16:34:20.311Z,1472747660.311 [CommandLine](IMPORTANT): got command run 
2016-09-01T16:34:20.314Z,1472747660.314 [CommandLine](IMPORTANT): Running 
2016-09-01T16:34:25.085Z,1472747665.085 [MissionManager](IMPORTANT): Started mission sci2
2016-09-01T16:39:52.498Z,1472747992.498 [sci2:NeedComms:F.Buoyancy:A_Timeout:A](IMPORTANT): buoyancy pump-down timeout at 952.176983 ml 
2016-09-01T16:46:39.075Z,1472748399.075 [sci2:Lap:Wpt1:A.Waypoint](IMPORTANT): Reached Waypoint: 36.880003,-121.989993
2016-09-01T17:32:19.792Z,1472751139.792 [sci2:NeedComms:F.Buoyancy:A_Timeout:A](IMPORTANT): buoyancy pump-down timeout at 945.596199 ml 
2016-09-01T17:33:54.017Z,1472751234.017 [CBIT](IMPORTANT): EFC elev offset (n=7200): elevOffset = 2.556616 degree
2016-09-01T18:21:29.594Z,1472754089.594 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=15769, MT Status=1, MTMSN=506
2016-09-01T18:21:30.426Z,1472754090.426 [CommandLine](IMPORTANT): got command configSet VerticalTemperatureHomogeneityIndexCalculator.depth1 5.000000 meter persist
2016-09-01T18:26:52.641Z,1472754412.641 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=15770, MT Status=1, MTMSN=507
2016-09-01T18:26:53.564Z,1472754413.564 [CommandLine](IMPORTANT): got command configSet VerticalTemperatureHomogeneityIndexCalculator.depth2 10.000000 meter persist
2016-09-01T18:29:56.826Z,1472754596.826 [sci2:NeedComms:F.Buoyancy:A_Timeout:A](IMPORTANT): buoyancy pump-down timeout at 945.730601 ml 
2016-09-01T18:32:17.086Z,1472754737.086 [CBIT](IMPORTANT): EFC elev offset (n=7200): elevOffset = 2.704834 degree
2016-09-01T18:34:25.687Z,1472754865.687 [MissionManager](IMPORTANT): Started mission Default
2016-09-01T18:39:07.093Z,1472755147.093 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=15771, MT Status=1, MTMSN=508
2016-09-01T18:39:07.812Z,1472755147.812 [CommandLine](IMPORTANT): got command configSet VerticalTemperatureHomogeneityIndexCalculator.depth3 20.000000 meter persist