2019-12-04T19:35:16.186Z,1575488116.186 [Supervisor](DEBUG): Initializing supervisor.
2019-12-04T19:35:16.197Z,1575488116.197 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2019-12-04T19:35:16.197Z,1575488116.197 [SyncHandler](INFO): Protected caller Thread ID is 807
2019-12-04T19:35:16.198Z,1575488116.198 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2019-12-04T19:35:16.209Z,1575488116.209 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2019-12-04T19:35:16.209Z,1575488116.209 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 808
2019-12-04T19:35:16.212Z,1575488116.212 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2019-12-04T19:35:16.234Z,1575488116.234 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2019-12-04T19:35:16.245Z,1575488116.245 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2019-12-04T19:35:16.245Z,1575488116.245 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 809
2019-12-04T19:35:16.246Z,1575488116.246 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2019-12-04T19:35:16.257Z,1575488116.257 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2019-12-04T19:35:16.257Z,1575488116.257 [logger ThreadHandler](INFO): Protected caller Thread ID is 810
2019-12-04T19:35:16.259Z,1575488116.259 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2019-12-04T19:35:16.260Z,1575488116.260 [Supervisor](INFO): Looking for Config files in directory: Config/
2019-12-04T19:35:16.264Z,1575488116.264 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2019-12-04T19:35:16.466Z,1575488116.466 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2019-12-04T19:35:16.468Z,1575488116.468 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2019-12-04T19:35:16.886Z,1575488116.886 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2019-12-04T19:35:16.888Z,1575488116.888 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2019-12-04T19:35:17.123Z,1575488117.123 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2019-12-04T19:35:17.125Z,1575488117.125 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2019-12-04T19:35:18.314Z,1575488118.314 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2019-12-04T19:35:18.314Z,1575488118.314 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2019-12-04T19:35:19.299Z,1575488119.299 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2019-12-04T19:35:19.299Z,1575488119.299 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2019-12-04T19:35:20.260Z,1575488120.260 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2019-12-04T19:35:20.262Z,1575488120.262 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2019-12-04T19:35:20.875Z,1575488120.875 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2019-12-04T19:35:20.876Z,1575488120.876 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2019-12-04T19:35:21.282Z,1575488121.282 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2019-12-04T19:35:21.284Z,1575488121.284 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2019-12-04T19:35:21.688Z,1575488121.688 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2019-12-04T19:35:21.689Z,1575488121.689 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2019-12-04T19:35:21.840Z,1575488121.840 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2019-12-04T19:35:21.841Z,1575488121.841 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2019-12-04T19:35:21.947Z,1575488121.947 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2019-12-04T19:35:21.948Z,1575488121.948 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2019-12-04T19:35:22.031Z,1575488122.031 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2019-12-04T19:35:22.134Z,1575488122.134 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2019-12-04T19:35:22.136Z,1575488122.136 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2019-12-04T19:35:22.338Z,1575488122.338 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2019-12-04T19:35:22.340Z,1575488122.340 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2019-12-04T19:35:22.551Z,1575488122.551 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2019-12-04T19:35:22.553Z,1575488122.553 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2019-12-04T19:35:22.556Z,1575488122.556 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2019-12-04T19:35:22.640Z,1575488122.640 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2019-12-04T19:35:22.871Z,1575488122.871 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2019-12-04T19:35:22.872Z,1575488122.872 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2019-12-04T19:35:22.968Z,1575488122.968 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2019-12-04T19:35:23.137Z,1575488123.137 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2019-12-04T19:35:23.347Z,1575488123.347 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2019-12-04T19:35:23.433Z,1575488123.433 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2019-12-04T19:35:23.534Z,1575488123.534 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2019-12-04T19:35:23.629Z,1575488123.629 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2019-12-04T19:35:23.786Z,1575488123.786 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2019-12-04T19:35:23.893Z,1575488123.893 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2019-12-04T19:35:23.993Z,1575488123.993 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2019-12-04T19:35:24.010Z,1575488124.010 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2019-12-04T19:35:24.142Z,1575488124.142 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2019-12-04T19:35:24.143Z,1575488124.143 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2019-12-04T19:35:24.967Z,1575488124.967 [BuoyancyServo] Loaded
2019-12-04T19:35:24.967Z,1575488124.967 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2019-12-04T19:35:25.114Z,1575488125.114 [ElevatorServo] Loaded
2019-12-04T19:35:25.114Z,1575488125.114 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2019-12-04T19:35:25.159Z,1575488125.159 [MassServo] Loaded
2019-12-04T19:35:25.160Z,1575488125.160 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2019-12-04T19:35:25.176Z,1575488125.176 [RudderServo] Loaded
2019-12-04T19:35:25.176Z,1575488125.176 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2019-12-04T19:35:25.192Z,1575488125.192 [ThrusterServo] Loaded
2019-12-04T19:35:25.192Z,1575488125.192 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2019-12-04T19:35:25.192Z,1575488125.192 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2019-12-04T19:35:25.193Z,1575488125.193 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2019-12-04T19:35:25.360Z,1575488125.360 [SBIT](DEBUG): Construct Startup Built In Test.
2019-12-04T19:35:25.390Z,1575488125.390 [SBIT] Loaded
2019-12-04T19:35:25.390Z,1575488125.390 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2019-12-04T19:35:25.391Z,1575488125.391 [IBIT](DEBUG): Construct Initiated Built In Test.
2019-12-04T19:35:25.419Z,1575488125.419 [IBIT] Loaded
2019-12-04T19:35:25.419Z,1575488125.419 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2019-12-04T19:35:25.422Z,1575488125.422 [CBIT](DEBUG): Construct Continuous Built In Test.
2019-12-04T19:35:25.820Z,1575488125.820 [CBIT] Loaded
2019-12-04T19:35:25.820Z,1575488125.820 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2019-12-04T19:35:25.821Z,1575488125.821 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2019-12-04T19:35:25.821Z,1575488125.821 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2019-12-04T19:35:26.087Z,1575488126.087 [Aanderaa_O2] Loaded
2019-12-04T19:35:26.088Z,1575488126.088 [ComponentRegistry](DEBUG): SyncComponent "Aanderaa_O2" handled in the control thread.
2019-12-04T19:35:26.097Z,1575488126.097 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_density
2019-12-04T19:35:26.103Z,1575488126.103 [CTD_Seabird](INFO): created writer for : sea_water_density
2019-12-04T19:35:26.104Z,1575488126.104 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): depth
2019-12-04T19:35:26.109Z,1575488126.109 [CTD_Seabird](INFO): created writer for : depth
2019-12-04T19:35:26.110Z,1575488126.110 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_pressure
2019-12-04T19:35:26.115Z,1575488126.115 [CTD_Seabird](INFO): created writer for : sea_water_pressure
2019-12-04T19:35:26.116Z,1575488126.116 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_salinity
2019-12-04T19:35:26.121Z,1575488126.121 [CTD_Seabird](INFO): created writer for : sea_water_salinity
2019-12-04T19:35:26.122Z,1575488126.122 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_temperature
2019-12-04T19:35:26.127Z,1575488126.127 [CTD_Seabird](INFO): created writer for : sea_water_temperature
2019-12-04T19:35:26.128Z,1575488126.128 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): sea_water_electrical_conductivity
2019-12-04T19:35:26.133Z,1575488126.133 [CTD_Seabird](INFO): created writer for : sea_water_electrical_conductivity
2019-12-04T19:35:26.134Z,1575488126.134 [CTD_Seabird](DEBUG): LcmSlateWriter::add(): speed_of_sound_in_sea_water
2019-12-04T19:35:26.139Z,1575488126.139 [CTD_Seabird](INFO): created writer for : speed_of_sound_in_sea_water
2019-12-04T19:35:26.166Z,1575488126.166 [CTD_Seabird] Loaded
2019-12-04T19:35:26.166Z,1575488126.166 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2019-12-04T19:35:26.167Z,1575488126.167 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4066B4E0
2019-12-04T19:35:26.168Z,1575488126.168 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 889
2019-12-04T19:35:26.199Z,1575488126.199 [ESPComponent] Loaded
2019-12-04T19:35:26.199Z,1575488126.199 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2019-12-04T19:35:26.213Z,1575488126.213 [PAR_Licor] Loaded
2019-12-04T19:35:26.214Z,1575488126.214 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2019-12-04T19:35:26.220Z,1575488126.220 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output470
2019-12-04T19:35:26.220Z,1575488126.220 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output470
2019-12-04T19:35:26.224Z,1575488126.224 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.Output650
2019-12-04T19:35:26.225Z,1575488126.225 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: Output650
2019-12-04T19:35:26.229Z,1575488126.229 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.OutputChl
2019-12-04T19:35:26.229Z,1575488126.229 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: OutputChl
2019-12-04T19:35:26.234Z,1575488126.234 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg470nm
2019-12-04T19:35:26.234Z,1575488126.234 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg470nm
2019-12-04T19:35:26.238Z,1575488126.238 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.VolumeScatCoeff117deg650nm
2019-12-04T19:35:26.239Z,1575488126.239 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: VolumeScatCoeff117deg650nm
2019-12-04T19:35:26.243Z,1575488126.243 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff470nm
2019-12-04T19:35:26.244Z,1575488126.244 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff470nm
2019-12-04T19:35:26.248Z,1575488126.248 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.BackscatteringCoeff650nm
2019-12-04T19:35:26.248Z,1575488126.248 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: BackscatteringCoeff650nm
2019-12-04T19:35:26.253Z,1575488126.253 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.258Z,1575488126.258 [WetLabsBB2FL](INFO): created writer for : mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.258Z,1575488126.258 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_median_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.258Z,1575488126.258 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_median_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.263Z,1575488126.263 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.263Z,1575488126.263 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_mean_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.267Z,1575488126.267 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(DAtaURI): WetLabsBB2FL.bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.268Z,1575488126.268 [WetLabsBB2FL](DEBUG): LcmSlateWriter::add(): dataName: bin_variance_mass_concentration_of_chlorophyll_in_sea_water
2019-12-04T19:35:26.272Z,1575488126.272 [WetLabsBB2FL] Loaded
2019-12-04T19:35:26.273Z,1575488126.273 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2019-12-04T19:35:26.274Z,1575488126.274 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 4069B4E0
2019-12-04T19:35:26.274Z,1575488126.274 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 890
2019-12-04T19:35:26.275Z,1575488126.275 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2019-12-04T19:35:26.275Z,1575488126.275 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2019-12-04T19:35:26.332Z,1575488126.332 [DepthRateCalculator] Loaded
2019-12-04T19:35:26.332Z,1575488126.332 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2019-12-04T19:35:26.338Z,1575488126.338 [PitchRateCalculator] Loaded
2019-12-04T19:35:26.338Z,1575488126.338 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2019-12-04T19:35:26.355Z,1575488126.355 [SpeedCalculator] Loaded
2019-12-04T19:35:26.355Z,1575488126.355 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2019-12-04T19:35:26.415Z,1575488126.415 [TempGradientCalculator] Loaded
2019-12-04T19:35:26.415Z,1575488126.415 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2019-12-04T19:35:26.421Z,1575488126.421 [YawRateCalculator] Loaded
2019-12-04T19:35:26.421Z,1575488126.421 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2019-12-04T19:35:26.502Z,1575488126.502 [ElevatorOffsetCalculator] Loaded
2019-12-04T19:35:26.502Z,1575488126.502 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2019-12-04T19:35:26.502Z,1575488126.502 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2019-12-04T19:35:26.504Z,1575488126.504 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2019-12-04T19:35:26.555Z,1575488126.555 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2019-12-04T19:35:26.556Z,1575488126.556 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2019-12-04T19:35:26.681Z,1575488126.681 [DeadReckonUsingMultipleVelocitySources] Loaded
2019-12-04T19:35:26.681Z,1575488126.681 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2019-12-04T19:35:26.702Z,1575488126.702 [NavChart] Loaded
2019-12-04T19:35:26.703Z,1575488126.703 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2019-12-04T19:35:26.707Z,1575488126.707 [UniversalFixResidualReporter] Loaded
2019-12-04T19:35:26.707Z,1575488126.707 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2019-12-04T19:35:26.707Z,1575488126.707 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2019-12-04T19:35:26.708Z,1575488126.708 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2019-12-04T19:35:27.174Z,1575488127.174 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_orientation
2019-12-04T19:35:27.179Z,1575488127.179 [AHRS_M2](INFO): created writer for : platform_orientation
2019-12-04T19:35:27.179Z,1575488127.179 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_magnetic_orientation
2019-12-04T19:35:27.185Z,1575488127.185 [AHRS_M2](INFO): created writer for : platform_magnetic_orientation
2019-12-04T19:35:27.185Z,1575488127.185 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_pitch_angle
2019-12-04T19:35:27.190Z,1575488127.190 [AHRS_M2](INFO): created writer for : platform_pitch_angle
2019-12-04T19:35:27.191Z,1575488127.191 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_roll_angle
2019-12-04T19:35:27.196Z,1575488127.196 [AHRS_M2](INFO): created writer for : platform_roll_angle
2019-12-04T19:35:27.378Z,1575488127.378 [AHRS_M2] Loaded
2019-12-04T19:35:27.378Z,1575488127.378 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2019-12-04T19:35:27.523Z,1575488127.523 [DataOverHttps] Loaded
2019-12-04T19:35:27.523Z,1575488127.523 [ComponentRegistry](DEBUG): Component "DataOverHttps" handled in its own thread.
2019-12-04T19:35:27.524Z,1575488127.524 [DataOverHttps ThreadHandler](DEBUG): Created PCaller Thread at 409634E0
2019-12-04T19:35:27.525Z,1575488127.525 [DataOverHttps ThreadHandler](INFO): Protected caller Thread ID is 892
2019-12-04T19:35:27.538Z,1575488127.538 [Depth_Keller] Loaded
2019-12-04T19:35:27.538Z,1575488127.538 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2019-12-04T19:35:27.543Z,1575488127.543 [DropWeight] Loaded
2019-12-04T19:35:27.543Z,1575488127.543 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2019-12-04T19:35:27.591Z,1575488127.591 [DVL_micro] Loaded
2019-12-04T19:35:27.591Z,1575488127.591 [ComponentRegistry](DEBUG): SyncComponent "DVL_micro" handled in the control thread.
2019-12-04T19:35:27.685Z,1575488127.685 [NAL9602] Loaded
2019-12-04T19:35:27.685Z,1575488127.685 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2019-12-04T19:35:27.691Z,1575488127.691 [Onboard] Loaded
2019-12-04T19:35:27.691Z,1575488127.691 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2019-12-04T19:35:27.694Z,1575488127.694 [Radio_Surface] Loaded
2019-12-04T19:35:27.695Z,1575488127.695 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2019-12-04T19:35:27.696Z,1575488127.696 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 409934E0
2019-12-04T19:35:27.696Z,1575488127.696 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 893
2019-12-04T19:35:29.007Z,1575488129.007 [BPC1] Loaded
2019-12-04T19:35:29.007Z,1575488129.007 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2019-12-04T19:35:29.007Z,1575488129.007 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2019-12-04T19:35:29.008Z,1575488129.008 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2019-12-04T19:35:29.122Z,1575488129.122 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2019-12-04T19:35:29.122Z,1575488129.122 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2019-12-04T19:35:29.212Z,1575488129.212 [VerticalControl](DEBUG): Construct VerticalControl.
2019-12-04T19:35:29.298Z,1575488129.298 [VerticalControl] Loaded
2019-12-04T19:35:29.298Z,1575488129.298 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2019-12-04T19:35:29.299Z,1575488129.299 [HorizontalControl](DEBUG): Construct HorizontalControl.
2019-12-04T19:35:29.359Z,1575488129.359 [HorizontalControl] Loaded
2019-12-04T19:35:29.359Z,1575488129.359 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2019-12-04T19:35:29.360Z,1575488129.360 [SpeedControl](DEBUG): Construct SpeedControl.
2019-12-04T19:35:29.362Z,1575488129.362 [SpeedControl] Loaded
2019-12-04T19:35:29.362Z,1575488129.362 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2019-12-04T19:35:29.363Z,1575488129.363 [LoopControl](DEBUG): Construct LoopControl.
2019-12-04T19:35:29.363Z,1575488129.363 [LoopControl] Loaded
2019-12-04T19:35:29.364Z,1575488129.364 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2019-12-04T19:35:29.364Z,1575488129.364 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2019-12-04T19:35:29.365Z,1575488129.365 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2019-12-04T19:35:29.389Z,1575488129.389 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2019-12-04T19:35:29.389Z,1575488129.389 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2019-12-04T19:35:29.744Z,1575488129.744 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2019-12-04T19:35:29.748Z,1575488129.748 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2019-12-04T19:35:29.749Z,1575488129.749 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2019-12-04T19:35:29.756Z,1575488129.756 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2019-12-04T19:35:29.757Z,1575488129.757 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40ACE4E0
2019-12-04T19:35:29.757Z,1575488129.757 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 894
2019-12-04T19:35:29.762Z,1575488129.762 [Supervisor](INFO): Main Thread ID is 803
2019-12-04T19:35:29.762Z,1575488129.762 [Supervisor](DEBUG): Running supervisor.
2019-12-04T19:35:29.763Z,1575488129.763 [CommandLine ThreadHandler](INFO): Handler Thread ID is 895
2019-12-04T19:35:29.765Z,1575488129.765 [controlThread ThreadHandler](INFO): Handler Thread ID is 896
2019-12-04T19:35:29.765Z,1575488129.765 [controlThread](DEBUG): Initializing ControlThread
2019-12-04T19:35:29.767Z,1575488129.767 [SBIT](INFO): Initialize SBIT Component.
2019-12-04T19:35:29.768Z,1575488129.768 [SBIT](IMPORTANT): git: 2019-10-01_A
2019-12-04T19:35:29.768Z,1575488129.768 [SBIT](INFO): git hash: 45f1fece079aa3565d4a3aba33a016ea6943a305
2019-12-04T19:35:29.768Z,1575488129.768 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2019-12-04T19:35:29.770Z,1575488129.770 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
Kernel Reported: #1 PREEMPT Thu Feb 21 11:17:40 PST 2019
2019-12-04T19:35:29.771Z,1575488129.771 [SBIT](INFO): Beginning SBIT in 68.000000 seconds.
2019-12-04T19:35:29.771Z,1575488129.771 [IBIT](INFO): Initialize IBIT Component.
2019-12-04T19:35:29.772Z,1575488129.772 [CBIT](DEBUG): Initialize CBIT Component.
2019-12-04T19:35:29.773Z,1575488129.773 [logger ThreadHandler](INFO): Handler Thread ID is 897
2019-12-04T19:35:29.785Z,1575488129.785 [CBIT](DEBUG): Initialized mux pins.
2019-12-04T19:35:29.785Z,1575488129.785 [CBIT](DEBUG): Initializing the watchdog timer.
2019-12-04T19:35:29.793Z,1575488129.793 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 898
2019-12-04T19:35:29.794Z,1575488129.794 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2019-12-04T19:35:29.797Z,1575488129.797 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-12-04T19:35:29.799Z,1575488129.799 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 900
2019-12-04T19:35:29.800Z,1575488129.800 [WetLabsBB2FL](INFO): Powering down
2019-12-04T19:35:29.809Z,1575488129.809 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2019-12-04T19:35:29.809Z,1575488129.809 [CBIT](DEBUG): Initializing heartbeat.
2019-12-04T19:35:29.846Z,1575488129.846 [DataOverHttps ThreadHandler](INFO): Handler Thread ID is 901
2019-12-04T19:35:29.847Z,1575488129.847 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2019-12-04T19:35:29.881Z,1575488129.881 [CBIT](DEBUG): Deactivating GF circuits.
2019-12-04T19:35:29.881Z,1575488129.881 [CBIT](DEBUG): Deactivating emergency mode.
2019-12-04T19:35:29.917Z,1575488129.917 [CBIT](DEBUG): Backplane powered.
2019-12-04T19:35:29.921Z,1575488129.921 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2019-12-04T19:35:29.921Z,1575488129.921 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2019-12-04T19:35:29.922Z,1575488129.922 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2019-12-04T19:35:29.922Z,1575488129.922 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2019-12-04T19:35:29.923Z,1575488129.923 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2019-12-04T19:35:29.923Z,1575488129.923 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2019-12-04T19:35:29.924Z,1575488129.924 [NavChart](DEBUG): Initialize NavChart Navigation.
2019-12-04T19:35:29.924Z,1575488129.924 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2019-12-04T19:35:29.938Z,1575488129.938 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2019-12-04T19:35:29.939Z,1575488129.939 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2019-12-04T19:35:29.940Z,1575488129.940 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2019-12-04T19:35:29.940Z,1575488129.940 [LoopControl](DEBUG): Initialize LoopControlComponent.
2019-12-04T19:35:29.949Z,1575488129.949 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 902
2019-12-04T19:35:30.046Z,1575488130.046 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2019-12-04T19:35:30.056Z,1575488130.056 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 903
2019-12-04T19:35:30.196Z,1575488130.196 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2019-12-04T19:35:30.203Z,1575488130.203 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2019-12-04T19:35:30.203Z,1575488130.203 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2019-12-04T19:35:30.203Z,1575488130.203 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2019-12-04T19:35:30.204Z,1575488130.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2019-12-04T19:35:30.204Z,1575488130.204 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2019-12-04T19:35:30.204Z,1575488130.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2019-12-04T19:35:30.204Z,1575488130.204 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2019-12-04T19:35:30.204Z,1575488130.204 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2019-12-04T19:35:30.205Z,1575488130.205 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2019-12-04T19:35:30.205Z,1575488130.205 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2019-12-04T19:35:30.205Z,1575488130.205 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2019-12-04T19:35:30.205Z,1575488130.205 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2019-12-04T19:35:30.206Z,1575488130.206 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2019-12-04T19:35:30.206Z,1575488130.206 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2019-12-04T19:35:30.206Z,1575488130.206 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2019-12-04T19:35:30.206Z,1575488130.206 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2019-12-04T19:35:30.286Z,1575488130.286 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2019-12-04T19:35:30.286Z,1575488130.286 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2019-12-04T19:35:30.353Z,1575488130.353 [Radio_Surface](INFO): Powering up
2019-12-04T19:35:30.362Z,1575488130.362 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2019-12-04T19:35:30.363Z,1575488130.363 [Default:A.Wait](DEBUG): Construct Wait.
2019-12-04T19:35:30.365Z,1575488130.365 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2019-12-04T19:35:30.404Z,1575488130.404 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2019-12-04T19:35:30.406Z,1575488130.406 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2019-12-04T19:35:30.437Z,1575488130.437 [Default:E.Execute](DEBUG): Construct Execute.
2019-12-04T19:35:30.440Z,1575488130.440 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2019-12-04T19:35:30.451Z,1575488130.451 [controlThread](DEBUG): Component order: CycleStarter,Aanderaa_O2,ESPComponent,PAR_Licor,AHRS_M2,Depth_Keller,DropWeight,DVL_micro,NAL9602,Onboard,BPC1,PAR_Licor,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2019-12-04T19:35:30.490Z,1575488130.490 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2019-12-04T19:35:30.598Z,1575488130.598 [Depth_Keller](ERROR): Pressure reading out of range: 1895.684326 decibar
2019-12-04T19:35:30.665Z,1575488130.665 [DepthRateCalculator](ERROR): Depth measurement is not active
2019-12-04T19:35:30.730Z,1575488130.730 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:30.737Z,1575488130.737 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2019-12-04T19:35:30.738Z,1575488130.738 [ElevatorServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:30.745Z,1575488130.745 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2019-12-04T19:35:30.746Z,1575488130.746 [MassServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:30.753Z,1575488130.753 [MassServo](DEBUG): Initializing MassServo.
2019-12-04T19:35:30.754Z,1575488130.754 [RudderServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:30.761Z,1575488130.761 [RudderServo](DEBUG): Initializing RudderServo.
2019-12-04T19:35:30.762Z,1575488130.762 [ThrusterServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:30.769Z,1575488130.769 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2019-12-04T19:35:30.895Z,1575488130.895 [DropWeight](CRITICAL): DROP WEIGHT MISSING.

2019-12-04T19:35:30.895Z,1575488130.895 [DropWeight] Hardware Fault, FailCount= 1
2019-12-04T19:35:30.895Z,1575488130.895 [DropWeight](ERROR): Hardware Fault
2019-12-04T19:35:30.936Z,1575488130.936 [CommandLine](FAULT): Scheduling is paused
2019-12-04T19:35:30.936Z,1575488130.936 [CBIT](INFO): Critical error at 20191204T193530
2019-12-04T19:35:30.937Z,1575488130.937 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2019-12-04T19:35:30.939Z,1575488130.939 [CBIT](ERROR): Hardware Fault in component: DropWeight
2019-12-04T19:35:30.940Z,1575488130.940 [CBIT](CRITICAL): Hardware Fault in component: DropWeight
2019-12-04T19:35:31.629Z,1575488131.629 [RudderServo](ERROR): Rudder initialization uart error serial timeout
2019-12-04T19:35:31.629Z,1575488131.629 [RudderServo](FAULT): Rudder failed to initialize
2019-12-04T19:35:31.629Z,1575488131.629 [RudderServo] Communications Fault, FailCount= 1
2019-12-04T19:35:31.629Z,1575488131.629 [RudderServo](ERROR): Communications Fault
2019-12-04T19:35:31.786Z,1575488131.786 [CBIT](INFO): Critical error at 20191204T193530
2019-12-04T19:35:31.788Z,1575488131.788 [CBIT](ERROR): Communications Fault in component: RudderServo
2019-12-04T19:35:31.998Z,1575488131.998 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2019-12-04T19:35:31.998Z,1575488131.998 [RudderServo](INFO): Powering down
2019-12-04T19:35:32.653Z,1575488132.653 [RudderServo](DEBUG): Initializing EZServoServo.
2019-12-04T19:35:32.774Z,1575488132.774 [RudderServo](DEBUG): Initializing RudderServo.
2019-12-04T19:35:32.778Z,1575488132.778 [CBIT](INFO): Clearing failed state for component RudderServo
2019-12-04T19:35:32.778Z,1575488132.778 [RudderServo] No Fault, FailCount= 1
2019-12-04T19:35:34.141Z,1575488134.141 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:34.593Z,1575488134.593 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:35.097Z,1575488135.097 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:35.693Z,1575488135.693 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:36.161Z,1575488136.161 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:36.637Z,1575488136.637 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:37.366Z,1575488137.366 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:37.793Z,1575488137.793 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:38.253Z,1575488138.253 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:38.302Z,1575488138.302 [CommandLine](IMPORTANT): got command quit
2019-12-04T19:35:38.685Z,1575488138.685 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:39.129Z,1575488139.129 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:39.305Z,1575488139.305 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:39.305Z,1575488139.305 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:39.441Z,1575488139.441 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2019-12-04T19:35:39.441Z,1575488139.441 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:39.442Z,1575488139.442 [CommandLine](INFO): Join timeout helper Thread ID is 914
2019-12-04T19:35:39.453Z,1575488139.453 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2019-12-04T19:35:39.453Z,1575488139.453 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:39.453Z,1575488139.453 [NavChartDb](INFO): Join timeout helper Thread ID is 915
2019-12-04T19:35:39.573Z,1575488139.573 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:40.009Z,1575488140.009 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:40.441Z,1575488140.441 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:40.547Z,1575488140.547 [Aanderaa_O2](FAULT): Failed to initialize within timeout.
2019-12-04T19:35:40.547Z,1575488140.547 [Aanderaa_O2] Communications Fault, FailCount= 1
2019-12-04T19:35:40.548Z,1575488140.548 [Aanderaa_O2](ERROR): Communications Fault
2019-12-04T19:35:40.861Z,1575488140.861 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:40.929Z,1575488140.929 [CBIT](ERROR): Communications Fault in component: Aanderaa_O2
2019-12-04T19:35:41.069Z,1575488141.069 [Aanderaa_O2](INFO): Powering down
2019-12-04T19:35:41.437Z,1575488141.437 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:41.897Z,1575488141.897 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:42.349Z,1575488142.349 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:42.445Z,1575488142.445 [CBIT](INFO): Clearing failed state for component Aanderaa_O2
2019-12-04T19:35:42.445Z,1575488142.445 [Aanderaa_O2] No Fault, FailCount= 1
2019-12-04T19:35:42.797Z,1575488142.797 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:42.845Z,1575488142.845 [CTD_Seabird](FAULT): Failed to initialize within timeout.
2019-12-04T19:35:42.845Z,1575488142.845 [CTD_Seabird] Communications Fault, FailCount= 1
2019-12-04T19:35:42.845Z,1575488142.845 [CTD_Seabird](ERROR): Communications Fault
2019-12-04T19:35:42.883Z,1575488142.883 [CBIT](ERROR): Communications Fault in component: CTD_Seabird
2019-12-04T19:35:43.233Z,1575488143.233 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:43.249Z,1575488143.249 [CTD_Seabird](INFO): Powering down
2019-12-04T19:35:43.697Z,1575488143.697 [AHRS_M2](ERROR): setBoresightMatrix UART error: serial timeout
2019-12-04T19:35:43.697Z,1575488143.697 [AHRS_M2](FAULT): Failed to initialize within timeout.
2019-12-04T19:35:43.697Z,1575488143.697 [AHRS_M2] Communications Fault, FailCount= 1
2019-12-04T19:35:43.697Z,1575488143.697 [AHRS_M2](ERROR): Communications Fault
2019-12-04T19:35:43.785Z,1575488143.785 [CBIT](ERROR): Communications Fault in component: AHRS_M2
2019-12-04T19:35:43.809Z,1575488143.809 [AHRS_M2](INFO): Powering down
2019-12-04T19:35:44.289Z,1575488144.289 [CBIT](INFO): Clearing failed state for component CTD_Seabird
2019-12-04T19:35:44.289Z,1575488144.289 [CTD_Seabird] No Fault, FailCount= 1
2019-12-04T19:35:44.610Z,1575488144.610 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2019-12-04T19:35:44.613Z,1575488144.613 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2019-12-04T19:35:44.693Z,1575488144.693 [CBIT](INFO): Clearing failed state for component AHRS_M2
2019-12-04T19:35:44.693Z,1575488144.693 [AHRS_M2] No Fault, FailCount= 1
2019-12-04T19:35:45.017Z,1575488145.017 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2019-12-04T19:35:45.209Z,1575488145.209 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:45.209Z,1575488145.209 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.213Z,1575488145.213 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2019-12-04T19:35:45.213Z,1575488145.213 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.213Z,1575488145.213 [Radio_Surface](INFO): Join timeout helper Thread ID is 919
2019-12-04T19:35:45.301Z,1575488145.301 [Radio_Surface](INFO): Powering down
2019-12-04T19:35:45.302Z,1575488145.302 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:45.302Z,1575488145.302 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.305Z,1575488145.305 [ComponentRegistry](INFO): Shutting down DataOverHttps ThreadHandler
2019-12-04T19:35:45.305Z,1575488145.305 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.305Z,1575488145.305 [DataOverHttps](INFO): Join timeout helper Thread ID is 920
2019-12-04T19:35:45.909Z,1575488145.909 [DataOverHttps ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:45.909Z,1575488145.909 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.913Z,1575488145.913 [ComponentRegistry](INFO): Shutting down WetLabsBB2FL ThreadHandler
2019-12-04T19:35:45.913Z,1575488145.913 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.913Z,1575488145.913 [WetLabsBB2FL](INFO): Join timeout helper Thread ID is 921
2019-12-04T19:35:45.933Z,1575488145.933 [WetLabsBB2FL ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:45.933Z,1575488145.933 [WetLabsBB2FL](INFO): Powering down
2019-12-04T19:35:45.934Z,1575488145.934 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.946Z,1575488145.946 [ComponentRegistry](INFO): Shutting down CTD_Seabird ThreadHandler
2019-12-04T19:35:45.946Z,1575488145.946 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:45.946Z,1575488145.946 [CTD_Seabird](INFO): Join timeout helper Thread ID is 922
2019-12-04T19:35:46.617Z,1575488146.617 [CTD_Seabird](INFO): Powering down
2019-12-04T19:35:46.749Z,1575488146.749 [CTD_Seabird ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:46.749Z,1575488146.749 [CTD_Seabird](INFO): Powering down
2019-12-04T19:35:46.761Z,1575488146.761 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:46.782Z,1575488146.782 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2019-12-04T19:35:46.782Z,1575488146.782 [logger ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:46.782Z,1575488146.782 [logger](INFO): Join timeout helper Thread ID is 923
2019-12-04T19:35:46.829Z,1575488146.829 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:46.829Z,1575488146.829 [logger ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:46.849Z,1575488146.849 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2019-12-04T19:35:46.850Z,1575488146.850 [CommandLine ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:46.850Z,1575488146.850 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2019-12-04T19:35:46.850Z,1575488146.850 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:46.850Z,1575488146.850 [controlThread](INFO): Join timeout helper Thread ID is 924
2019-12-04T19:35:47.017Z,1575488147.017 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2019-12-04T19:35:47.017Z,1575488147.017 [controlThread](DEBUG): Uninitializing ControlThread
2019-12-04T19:35:47.137Z,1575488147.137 [Aanderaa_O2](INFO): Powering down
2019-12-04T19:35:47.138Z,1575488147.138 [AHRS_M2](INFO): Powering down
2019-12-04T19:35:47.281Z,1575488147.281 [DVL_micro](INFO): Powering down
2019-12-04T19:35:47.282Z,1575488147.282 [NAL9602](INFO): Powering down
2019-12-04T19:35:47.302Z,1575488147.302 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2019-12-04T19:35:47.303Z,1575488147.303 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2019-12-04T19:35:47.303Z,1575488147.303 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2019-12-04T19:35:47.303Z,1575488147.303 [MissionManager](INFO): Uninitializing Mission Default
2019-12-04T19:35:47.306Z,1575488147.306 [MissionManager](INFO): Uninitializing Mission Startup
2019-12-04T19:35:47.307Z,1575488147.307 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2019-12-04T19:35:47.307Z,1575488147.307 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2019-12-04T19:35:47.307Z,1575488147.307 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2019-12-04T19:35:47.308Z,1575488147.308 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2019-12-04T19:35:47.308Z,1575488147.308 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2019-12-04T19:35:47.308Z,1575488147.308 [BuoyancyServo](INFO): Powering down
2019-12-04T19:35:47.321Z,1575488147.321 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2019-12-04T19:35:47.321Z,1575488147.321 [ElevatorServo](INFO): Powering down
2019-12-04T19:35:47.341Z,1575488147.341 [MassServo](DEBUG): Uninitialize Mass Servo.
2019-12-04T19:35:47.341Z,1575488147.341 [MassServo](INFO): Powering down
2019-12-04T19:35:47.360Z,1575488147.360 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2019-12-04T19:35:47.360Z,1575488147.360 [RudderServo](INFO): Powering down
2019-12-04T19:35:47.361Z,1575488147.361 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2019-12-04T19:35:47.361Z,1575488147.361 [ThrusterServo](INFO): Powering down
2019-12-04T19:35:47.362Z,1575488147.362 [SBIT](DEBUG): Uninitialize SBIT Component.
2019-12-04T19:35:47.362Z,1575488147.362 [IBIT](DEBUG): Uninitialize IBIT Component.
2019-12-04T19:35:47.362Z,1575488147.362 [CBIT](DEBUG): Uninitialize CBIT Component.
2019-12-04T19:35:47.362Z,1575488147.362 [CBIT](DEBUG): Powering off loads.
2019-12-04T19:35:47.377Z,1575488147.377 [CBIT](DEBUG): Disabling WDT.
2019-12-04T19:35:47.389Z,1575488147.389 [CBIT](DEBUG): Opening all GF detection circuits.
2019-12-04T19:35:47.390Z,1575488147.390 [controlThread ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.675Z,1575488147.675 [WetLabsBB2FL ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.681Z,1575488147.681 [CTD_Seabird ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.742Z,1575488147.742 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.748Z,1575488147.748 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.794Z,1575488147.794 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2019-12-04T19:35:47.838Z,1575488147.838 [logger ThreadHandler](INFO): Thread cancelled.