2018-12-19T17:43:49.078Z,1545241429.078 [Supervisor](DEBUG): Initializing supervisor.
2018-12-19T17:43:49.081Z,1545241429.081 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-12-19T17:43:49.082Z,1545241429.082 [SyncHandler](INFO): Protected caller Thread ID is 806
2018-12-19T17:43:49.083Z,1545241429.083 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-12-19T17:43:49.086Z,1545241429.086 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-12-19T17:43:49.086Z,1545241429.086 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 807
2018-12-19T17:43:49.090Z,1545241429.090 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-12-19T17:43:49.104Z,1545241429.104 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-12-19T17:43:49.105Z,1545241429.105 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-12-19T17:43:49.105Z,1545241429.105 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 808
2018-12-19T17:43:49.107Z,1545241429.107 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-12-19T17:43:49.110Z,1545241429.110 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-12-19T17:43:49.111Z,1545241429.111 [logger ThreadHandler](INFO): Protected caller Thread ID is 809
2018-12-19T17:43:49.115Z,1545241429.115 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-12-19T17:43:49.116Z,1545241429.116 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-12-19T17:43:49.121Z,1545241429.121 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-12-19T17:43:49.227Z,1545241429.227 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-12-19T17:43:49.229Z,1545241429.229 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-12-19T17:43:49.355Z,1545241429.355 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-12-19T17:43:49.357Z,1545241429.357 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-12-19T17:43:49.606Z,1545241429.606 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-12-19T17:43:49.608Z,1545241429.608 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-12-19T17:43:50.051Z,1545241430.051 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-12-19T17:43:50.052Z,1545241430.052 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-12-19T17:43:50.473Z,1545241430.473 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-12-19T17:43:50.474Z,1545241430.474 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-12-19T17:43:51.121Z,1545241431.121 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-12-19T17:43:51.123Z,1545241431.123 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-12-19T17:43:51.689Z,1545241431.689 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-12-19T17:43:51.690Z,1545241431.690 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-12-19T17:43:52.272Z,1545241432.272 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-12-19T17:43:52.335Z,1545241432.335 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-12-19T17:43:52.660Z,1545241432.660 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-12-19T17:43:53.032Z,1545241433.032 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-12-19T17:43:53.034Z,1545241433.034 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-12-19T17:43:53.188Z,1545241433.188 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-12-19T17:43:53.189Z,1545241433.189 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-12-19T17:43:53.418Z,1545241433.418 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-12-19T17:43:53.419Z,1545241433.419 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-12-19T17:43:53.635Z,1545241433.635 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-12-19T17:43:53.636Z,1545241433.636 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-12-19T17:43:53.736Z,1545241433.736 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-12-19T17:43:53.737Z,1545241433.737 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-12-19T17:43:53.888Z,1545241433.888 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-12-19T17:43:53.890Z,1545241433.890 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/
2018-12-19T17:43:53.892Z,1545241433.892 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Battery.cfg
2018-12-19T17:43:54.132Z,1545241434.132 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-12-19T17:43:54.134Z,1545241434.134 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/logger.cfg
2018-12-19T17:43:54.243Z,1545241434.243 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Science.cfg
2018-12-19T17:43:54.405Z,1545241434.405 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Control.cfg
2018-12-19T17:43:54.501Z,1545241434.501 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Simulator.cfg
2018-12-19T17:43:54.588Z,1545241434.588 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Sensor.cfg
2018-12-19T17:43:54.758Z,1545241434.758 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/vehicle.cfg
2018-12-19T17:43:54.977Z,1545241434.977 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Servo.cfg
2018-12-19T17:43:55.079Z,1545241435.079 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/Navigation.cfg
2018-12-19T17:43:55.177Z,1545241435.177 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/BIT.cfg
2018-12-19T17:43:55.278Z,1545241435.278 [Supervisor](INFO): Opening Config file at: Config/lrauv-makai/secure.cfg
2018-12-19T17:43:55.363Z,1545241435.363 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-makai/root/
2018-12-19T17:43:55.364Z,1545241435.364 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-12-19T17:43:55.374Z,1545241435.374 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-12-19T17:43:55.512Z,1545241435.512 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-12-19T17:43:55.513Z,1545241435.513 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-12-19T17:43:55.537Z,1545241435.537 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-12-19T17:43:55.538Z,1545241435.538 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-12-19T17:43:55.597Z,1545241435.597 [DepthRateCalculator] Loaded
2018-12-19T17:43:55.597Z,1545241435.597 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-12-19T17:43:55.603Z,1545241435.603 [PitchRateCalculator] Loaded
2018-12-19T17:43:55.603Z,1545241435.603 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-12-19T17:43:55.620Z,1545241435.620 [SpeedCalculator] Loaded
2018-12-19T17:43:55.620Z,1545241435.620 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-12-19T17:43:55.641Z,1545241435.641 [TempGradientCalculator] Loaded
2018-12-19T17:43:55.642Z,1545241435.642 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-12-19T17:43:55.648Z,1545241435.648 [YawRateCalculator] Loaded
2018-12-19T17:43:55.648Z,1545241435.648 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-12-19T17:43:55.689Z,1545241435.689 [ElevatorOffsetCalculator] Loaded
2018-12-19T17:43:55.689Z,1545241435.689 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-12-19T17:43:55.690Z,1545241435.690 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-12-19T17:43:55.690Z,1545241435.690 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-12-19T17:43:55.732Z,1545241435.732 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-12-19T17:43:55.733Z,1545241435.733 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-12-19T17:43:55.906Z,1545241435.906 [Module Loader](ERROR): Cannot load library: libboost_system.so.1.63.0: cannot open shared object file: No such file or directory
2018-12-19T17:43:55.906Z,1545241435.906 [Module Loader](ERROR): Could not load the module at Modules/Sensor.so
2018-12-19T17:43:55.908Z,1545241435.908 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-12-19T17:43:56.084Z,1545241436.084 [SBIT](DEBUG): Construct Startup Built In Test.
2018-12-19T17:43:56.111Z,1545241436.111 [SBIT] Loaded
2018-12-19T17:43:56.111Z,1545241436.111 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-12-19T17:43:56.112Z,1545241436.112 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-12-19T17:43:56.141Z,1545241436.141 [IBIT] Loaded
2018-12-19T17:43:56.141Z,1545241436.141 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-12-19T17:43:56.144Z,1545241436.144 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-12-19T17:43:56.547Z,1545241436.547 [CBIT] Loaded
2018-12-19T17:43:56.548Z,1545241436.548 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-12-19T17:43:56.548Z,1545241436.548 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-12-19T17:43:56.549Z,1545241436.549 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-12-19T17:43:56.884Z,1545241436.884 [CTD_Seabird] Loaded
2018-12-19T17:43:56.884Z,1545241436.884 [ComponentRegistry](DEBUG): Component "CTD_Seabird" handled in its own thread.
2018-12-19T17:43:56.885Z,1545241436.885 [CTD_Seabird ThreadHandler](DEBUG): Created PCaller Thread at 4064D4E0
2018-12-19T17:43:56.886Z,1545241436.886 [CTD_Seabird ThreadHandler](INFO): Protected caller Thread ID is 889
2018-12-19T17:43:56.903Z,1545241436.903 [ESPComponent] Loaded
2018-12-19T17:43:56.904Z,1545241436.904 [ComponentRegistry](DEBUG): SyncComponent "ESPComponent" handled in the control thread.
2018-12-19T17:43:56.918Z,1545241436.918 [PAR_Licor] Loaded
2018-12-19T17:43:56.918Z,1545241436.918 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2018-12-19T17:43:56.968Z,1545241436.968 [WetLabsBB2FL] Loaded
2018-12-19T17:43:56.969Z,1545241436.969 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-12-19T17:43:56.970Z,1545241436.970 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 4067D4E0
2018-12-19T17:43:56.970Z,1545241436.970 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 890
2018-12-19T17:43:56.971Z,1545241436.971 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-12-19T17:43:56.971Z,1545241436.971 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-12-19T17:43:57.276Z,1545241437.276 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-12-19T17:43:57.276Z,1545241437.276 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-12-19T17:43:57.434Z,1545241437.434 [VerticalControl](DEBUG): Construct VerticalControl.
2018-12-19T17:43:57.778Z,1545241437.778 [VerticalControl] Loaded
2018-12-19T17:43:57.779Z,1545241437.779 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-12-19T17:43:57.779Z,1545241437.779 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-12-19T17:43:57.847Z,1545241437.847 [HorizontalControl] Loaded
2018-12-19T17:43:57.848Z,1545241437.848 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-12-19T17:43:57.848Z,1545241437.848 [SpeedControl](DEBUG): Construct SpeedControl.
2018-12-19T17:43:57.854Z,1545241437.854 [SpeedControl] Loaded
2018-12-19T17:43:57.854Z,1545241437.854 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-12-19T17:43:57.855Z,1545241437.855 [LoopControl](DEBUG): Construct LoopControl.
2018-12-19T17:43:57.855Z,1545241437.855 [LoopControl] Loaded
2018-12-19T17:43:57.856Z,1545241437.856 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-12-19T17:43:57.856Z,1545241437.856 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-12-19T17:43:57.857Z,1545241437.857 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-12-19T17:43:57.966Z,1545241437.966 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-12-19T17:43:57.967Z,1545241437.967 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-12-19T17:43:58.093Z,1545241438.093 [BuoyancyServo] Loaded
2018-12-19T17:43:58.093Z,1545241438.093 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-12-19T17:43:58.105Z,1545241438.105 [ElevatorServo] Loaded
2018-12-19T17:43:58.105Z,1545241438.105 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-12-19T17:43:58.116Z,1545241438.116 [MassServo] Loaded
2018-12-19T17:43:58.116Z,1545241438.116 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-12-19T17:43:58.128Z,1545241438.128 [RudderServo] Loaded
2018-12-19T17:43:58.128Z,1545241438.128 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-12-19T17:43:58.139Z,1545241438.139 [ThrusterServo] Loaded
2018-12-19T17:43:58.139Z,1545241438.139 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-12-19T17:43:58.140Z,1545241438.140 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-12-19T17:43:58.140Z,1545241438.140 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-12-19T17:43:58.260Z,1545241438.260 [DeadReckonUsingSpeedCalculator] Loaded
2018-12-19T17:43:58.260Z,1545241438.260 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-12-19T17:43:58.277Z,1545241438.277 [NavChart] Loaded
2018-12-19T17:43:58.277Z,1545241438.277 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-12-19T17:43:58.281Z,1545241438.281 [UniversalFixResidualReporter] Loaded
2018-12-19T17:43:58.282Z,1545241438.282 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-12-19T17:43:58.282Z,1545241438.282 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-12-19T17:43:58.285Z,1545241438.285 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-12-19T17:43:58.286Z,1545241438.286 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-12-19T17:43:58.293Z,1545241438.293 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-12-19T17:43:58.294Z,1545241438.294 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 407D74E0
2018-12-19T17:43:58.294Z,1545241438.294 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 891
2018-12-19T17:43:58.299Z,1545241438.299 [Supervisor](INFO): Main Thread ID is 802
2018-12-19T17:43:58.299Z,1545241438.299 [Supervisor](DEBUG): Running supervisor.
2018-12-19T17:43:58.299Z,1545241438.299 [CommandLine ThreadHandler](INFO): Handler Thread ID is 892
2018-12-19T17:43:58.302Z,1545241438.302 [controlThread ThreadHandler](INFO): Handler Thread ID is 893
2018-12-19T17:43:58.302Z,1545241438.302 [controlThread](DEBUG): Initializing ControlThread
2018-12-19T17:43:58.303Z,1545241438.303 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-12-19T17:43:58.303Z,1545241438.303 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-12-19T17:43:58.304Z,1545241438.304 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-12-19T17:43:58.304Z,1545241438.304 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-12-19T17:43:58.304Z,1545241438.304 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-12-19T17:43:58.305Z,1545241438.305 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-12-19T17:43:58.305Z,1545241438.305 [SBIT](INFO): Initialize SBIT Component.
2018-12-19T17:43:58.306Z,1545241438.306 [SBIT](IMPORTANT): git: 2018-12-13
2018-12-19T17:43:58.306Z,1545241438.306 [SBIT](INFO): git hash: 8200dc43e6ef01082c531ff0fab84136a371dc2d
2018-12-19T17:43:58.306Z,1545241438.306 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-12-19T17:43:58.308Z,1545241438.308 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
Kernel Reported: #1 PREEMPT Tue Dec 18 21:19:28 PST 2018
2018-12-19T17:43:58.309Z,1545241438.309 [SBIT](INFO): Beginning SBIT in 24.000000 seconds.
2018-12-19T17:43:58.309Z,1545241438.309 [IBIT](INFO): Initialize IBIT Component.
2018-12-19T17:43:58.310Z,1545241438.310 [CBIT](DEBUG): Initialize CBIT Component.
2018-12-19T17:43:58.311Z,1545241438.311 [logger ThreadHandler](INFO): Handler Thread ID is 894
2018-12-19T17:43:58.323Z,1545241438.323 [CBIT](DEBUG): Initialized mux pins.
2018-12-19T17:43:58.324Z,1545241438.324 [CBIT](DEBUG): Initializing the watchdog timer.
2018-12-19T17:43:58.336Z,1545241438.336 [CTD_Seabird ThreadHandler](INFO): Handler Thread ID is 895
2018-12-19T17:43:58.337Z,1545241438.337 [CTD_Seabird](DEBUG): Initializing CTD_Seabird.
2018-12-19T17:43:58.340Z,1545241438.340 [CTD_Seabird](INFO): Opening uart, block timeout 10ths=20
2018-12-19T17:43:58.341Z,1545241438.341 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 897
2018-12-19T17:43:58.342Z,1545241438.342 [WetLabsBB2FL](INFO): Powering down
2018-12-19T17:43:58.348Z,1545241438.348 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-12-19T17:43:58.348Z,1545241438.348 [CBIT](DEBUG): Initializing heartbeat.
2018-12-19T17:43:58.404Z,1545241438.404 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 898
2018-12-19T17:43:58.411Z,1545241438.411 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-12-19T17:43:58.412Z,1545241438.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-12-19T17:43:58.412Z,1545241438.412 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-12-19T17:43:58.412Z,1545241438.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-12-19T17:43:58.412Z,1545241438.412 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-12-19T17:43:58.412Z,1545241438.412 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-12-19T17:43:58.413Z,1545241438.413 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-12-19T17:43:58.414Z,1545241438.414 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-12-19T17:43:58.414Z,1545241438.414 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-12-19T17:43:58.414Z,1545241438.414 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-12-19T17:43:58.414Z,1545241438.414 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-12-19T17:43:58.420Z,1545241438.420 [CBIT](DEBUG): Deactivating GF circuits.
2018-12-19T17:43:58.420Z,1545241438.420 [CBIT](DEBUG): Deactivating emergency mode.
2018-12-19T17:43:58.460Z,1545241438.460 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-12-19T17:43:58.462Z,1545241438.462 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-12-19T17:43:58.462Z,1545241438.462 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-12-19T17:43:58.463Z,1545241438.463 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-12-19T17:43:58.464Z,1545241438.464 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-12-19T17:43:58.465Z,1545241438.465 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-12-19T17:43:58.466Z,1545241438.466 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-12-19T17:43:58.466Z,1545241438.466 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-12-19T17:43:58.466Z,1545241438.466 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-12-19T17:43:58.467Z,1545241438.467 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-12-19T17:43:58.524Z,1545241438.524 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-12-19T17:43:58.558Z,1545241438.558 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-12-19T17:43:58.559Z,1545241438.559 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-12-19T17:43:58.656Z,1545241438.656 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-12-19T17:43:58.657Z,1545241438.657 [Default:A.Wait](DEBUG): Construct Wait.
2018-12-19T17:43:58.659Z,1545241438.659 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-12-19T17:43:58.735Z,1545241438.735 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-12-19T17:43:58.738Z,1545241438.738 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-12-19T17:43:58.778Z,1545241438.778 [Default:E.Execute](DEBUG): Construct Execute.
2018-12-19T17:43:58.810Z,1545241438.810 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-12-19T17:43:58.814Z,1545241438.814 [controlThread](DEBUG): Component order: CycleStarter,ESPComponent,PAR_Licor,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-12-19T17:43:58.846Z,1545241438.846 [ESPComponent](INFO): powering down ESP
2018-12-19T17:43:59.300Z,1545241439.300 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:43:59.644Z,1545241439.644 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:43:59.652Z,1545241439.652 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-12-19T17:43:59.678Z,1545241439.678 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:43:59.684Z,1545241439.684 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-12-19T17:43:59.692Z,1545241439.692 [MassServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:43:59.696Z,1545241439.696 [MassServo](DEBUG): Initializing MassServo.
2018-12-19T17:43:59.725Z,1545241439.725 [RudderServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:43:59.736Z,1545241439.736 [RudderServo](DEBUG): Initializing RudderServo.
2018-12-19T17:43:59.753Z,1545241439.753 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:43:59.764Z,1545241439.764 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-12-19T17:43:59.946Z,1545241439.946 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:00.276Z,1545241440.276 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:00.624Z,1545241440.624 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-12-19T17:44:00.624Z,1545241440.624 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-12-19T17:44:00.624Z,1545241440.624 [BuoyancyServo] Communications Fault, FailCount= 1
2018-12-19T17:44:00.624Z,1545241440.624 [BuoyancyServo](ERROR): Communications Fault
2018-12-19T17:44:00.831Z,1545241440.831 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-12-19T17:44:00.852Z,1545241440.852 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:01.248Z,1545241441.248 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:01.648Z,1545241441.648 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:02.048Z,1545241442.048 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:02.448Z,1545241442.448 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:02.848Z,1545241442.848 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:02.885Z,1545241442.885 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-12-19T17:44:02.886Z,1545241442.886 [BuoyancyServo] No Fault, FailCount= 1
2018-12-19T17:44:03.260Z,1545241443.260 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:03.656Z,1545241443.656 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:04.048Z,1545241444.048 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:04.444Z,1545241444.444 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:04.848Z,1545241444.848 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:04.857Z,1545241444.857 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-12-19T17:44:04.977Z,1545241444.977 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-12-19T17:44:05.248Z,1545241445.248 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:05.648Z,1545241445.648 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:06.048Z,1545241446.048 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:06.448Z,1545241446.448 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:06.848Z,1545241446.848 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:07.248Z,1545241447.248 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:07.648Z,1545241447.648 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:08.048Z,1545241448.048 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:08.448Z,1545241448.448 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:08.501Z,1545241448.501 [CBIT](CRITICAL): Environmental Failure. Press:0.000000 PSI. Humidity:2143304%. Temp:3538984 C. ABORTING MISSION
2018-12-19T17:44:08.501Z,1545241448.501 [Supervisor](INFO): Stop Mission called by CBIT::monitorEnvironmentals
2018-12-19T17:44:08.848Z,1545241448.848 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:08.895Z,1545241448.895 [CommandLine](FAULT): Scheduling is paused
2018-12-19T17:44:08.895Z,1545241448.895 [CBIT](INFO): Critical error at 20181219T174408
2018-12-19T17:44:09.248Z,1545241449.248 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:09.648Z,1545241449.648 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:10.048Z,1545241450.048 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:10.448Z,1545241450.448 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:10.848Z,1545241450.848 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:11.248Z,1545241451.248 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-12-19T17:44:11.648Z,1545241451.648 [DepthRateCalculator](ERROR): Depth measurement is not acti